Psyllid ID: psy1413

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------41
Protein Sequence
MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML
Secondary Structure (PSIPRED)
ccEEEEEccccccccccccccccccccccccccccEEEEEEccccccccccccEEEccccccccccccccccccccccccccccccccccEEEEEEEEEEccccEEEEcccccEEEEEccccccccccEEEEEEEccHHHHHHHcccccEEEEEcccccccccHHHHHHccccEEEEEEcccccHHHHHHHHHcccccccccEEccEEcccccccEEEEEEcccccccccccccEEEEcccccccccHHHHcccccccccccEEEEccccccccccEEEccccEEEccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHccccccEEEEccccHHHHHHHcc
Secondary Structure Prediction (SSPRO)
EEEEEEcHHHHHHHHHcEccccEccccEEcccEEEEEEEEEcccccccccccEEEEcccccccccHHHHccccccEEEEEcccccccccEEEEEEEEEEEcHHHHHHHHHcEccccEccccEEcccEEEEEEEEEccccccHHHcccccEEEEcccccccccccHHHHHccccEEEEcccccccHHHHHHHHHccccccHHHEEEEEEHHHHHHHHHHHHHcccccccccccccEEEEccEEcccccHHHHcccHHHccccEEccEccEccccEcEEEEEHHHEEEccccccHHHHHcHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHcccccEEccccccccHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHc
Coil and Loop (DISEMBL)
mhcvgicgsdvhylthgqigdfrlsdpmivgheASGIVSKVGAKvkhlkvdnqtrfvpefrnvclspilrrrfslrfreqkpiedpddheVLLEMHCVgicgsdvhylthgqigdfrlsdpmivgheaSGIVSKVGAKvkhlkatrpggclvivgagsqdvkiplvltmtkeidirgvfryanDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCdrvaiepgvpcrtctyckegrynLCRQIffcatppdhgnlsryyRHAAdfchklpdhvsleegalleplsvgvHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELlqgeqpdktidcsgiestiklgml
Flexible Loop (DISEMBL)
MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLkvdnqtrfvpefrnvclspilrrrfslrfreqkpiedpddhEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGclvivgagsqdvkiPLVLTmtkeidirgVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEllqgeqpdktidcsgiestiklgml
Low Complexity Region (SEG)
MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML
Disordered region (IsUnstruct)
**CVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFSLRFREQK*I***DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG*********************
Disordered Region (DISOPRED)
MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML
Disordered Region (DISEMBL)
MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML
Disordered Region (DISPRO)
MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	408	2.2.26 [Sep-21-2011]
Q58D31	356	Sorbitol dehydrogenase OS	yes	N/A	0.446	0.511	0.581	4e-57
P07846	354	Sorbitol dehydrogenase OS	N/A	N/A	0.446	0.514	0.581	4e-57
Q64442	357	Sorbitol dehydrogenase OS	yes	N/A	0.453	0.518	0.556	7e-56
Q4R639	357	Sorbitol dehydrogenase OS	N/A	N/A	0.446	0.509	0.565	3e-54
Q00796	357	Sorbitol dehydrogenase OS	yes	N/A	0.446	0.509	0.565	3e-54
P27867	357	Sorbitol dehydrogenase OS	yes	N/A	0.453	0.518	0.545	6e-54
Q5R5F3	357	Sorbitol dehydrogenase OS	yes	N/A	0.446	0.509	0.559	3e-53
Q02912	348	Sorbitol dehydrogenase OS	N/A	N/A	0.455	0.534	0.471	8e-50
Q1PSI9	366	L-idonate 5-dehydrogenase	no	N/A	0.446	0.497	0.456	3e-43
Q0CWQ2	353	Probable D-xylulose reduc	N/A	N/A	0.446	0.515	0.449	2e-41

>sp|Q58D31|DHSO_BOVIN Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3

 Score =  222 bits (565), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 107/184 (58%), Positives = 144/184 (78%), Gaps = 2/184 (1%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G+ ++ +   DRVAIEPG P  T  +CK GRYNL   IFFCATPPD GNL R+Y+H A+F
Sbjct: 79  GSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANF 138

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C+KLPD+V+ EEGAL+EPLSVG+HACRRAGVTLG+KVL+ GAGPIGLV+LL A+A+GA++
Sbjct: 139 CYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVSLLAAKAMGAAQ 198

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           VV+TD+   +L  AKE+GAD  + I  N S +EI+   +E L G +P+ TI+C+G+E++I
Sbjct: 199 VVVTDLSASRLSKAKEVGADFILQIS-NESPQEIAKK-VEGLLGSKPEVTIECTGVETSI 256

Query: 404 KLGM 407
           + G+
Sbjct: 257 QAGI 260

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.
Bos taurus (taxid: 9913)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 4

>sp|P07846|DHSO_SHEEP Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1

 Score =  222 bits (565), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 107/184 (58%), Positives = 144/184 (78%), Gaps = 2/184 (1%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G+ ++ +   DRVAI+PG P +T  +CK GRYNL   IFFCATPPD GNL R+Y+H A+F
Sbjct: 77  GSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANF 136

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C+KLPD+V+ EEGAL+EPLSVG+HACRRAGVTLG+KVL+ GAGPIGLV LL A+A+GA++
Sbjct: 137 CYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQ 196

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           VV+TD+   +L  AKE+GAD  + I  N S EEI+   +E L G +P+ TI+C+G+E++I
Sbjct: 197 VVVTDLSASRLSKAKEVGADFILEIS-NESPEEIAKK-VEGLLGSKPEVTIECTGVETSI 254

Query: 404 KLGM 407
           + G+
Sbjct: 255 QAGI 258

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Ovis aries (taxid: 9940)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q64442|DHSO_MOUSE Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3

 Score =  218 bits (555), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 104/187 (55%), Positives = 142/187 (75%), Gaps = 2/187 (1%)

Query: 221 TGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHA 280
           T  G  +K +   DRVAIEPGVP     YCK GRYNL   IFFCATPPD GNL R+Y+H 
Sbjct: 77  TKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGNLCRFYKHN 136

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALG 340
           ADFC+KLPD V+ EEGAL+EPLSVG++ACRR  V+LG+KVL+ GAGP+G+VTLL A+A+G
Sbjct: 137 ADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVTLLVAKAMG 196

Query: 341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400
           A++VV+TD+   +L  AKE+GAD T+ + +  + +EI++  +E L G +P+ TI+C+G E
Sbjct: 197 AAQVVVTDLSASRLTKAKEVGADFTIQVGK-ETPQEIASK-VESLLGSKPEVTIECTGAE 254

Query: 401 STIKLGM 407
           S+++ G+
Sbjct: 255 SSVQTGI 261

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q4R639|DHSO_MACFA Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3

 Score =  213 bits (541), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 104/184 (56%), Positives = 140/184 (76%), Gaps = 2/184 (1%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G+ +K +   DRVAIEPGVP     +CK GRYNL   IFFCATPPD GNL R+Y+H A F
Sbjct: 80  GSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF 139

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C+KLPD+V+ EEGAL+EPLSVG+HACRR GVTLG +VL+ GAGPIG+V+LL A+A+GA++
Sbjct: 140 CYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIGVVSLLVAKAMGAAQ 199

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           VV+TD+   +L  AKE+GAD  + I +  S +EI+   +E L G +P+ TI+C+G E++I
Sbjct: 200 VVVTDLSAPRLSKAKEIGADLVLQISK-ESPQEIAGK-VEGLLGCKPEVTIECTGAEASI 257

Query: 404 KLGM 407
           + G+
Sbjct: 258 QAGI 261

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q00796|DHSO_HUMAN Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4

 Score =  212 bits (540), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 104/184 (56%), Positives = 139/184 (75%), Gaps = 2/184 (1%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G+++K +   DRVAIEPG P     +CK GRYNL   IFFCATPPD GNL R+Y+H A F
Sbjct: 80  GSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF 139

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C+KLPD+V+ EEGAL+EPLSVG+HACRR GVTLG KVL+ GAGPIG+VTLL A+A+GA++
Sbjct: 140 CYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQ 199

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           VV+TD+   +L  AKE+GAD  + I +  S +EI+   +E   G +P+ TI+C+G E++I
Sbjct: 200 VVVTDLSATRLSKAKEIGADLVLQISK-ESPQEIARK-VEGQLGCKPEVTIECTGAEASI 257

Query: 404 KLGM 407
           + G+
Sbjct: 258 QAGI 261

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P27867|DHSO_RAT Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4

 Score =  211 bits (538), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 102/187 (54%), Positives = 140/187 (74%), Gaps = 2/187 (1%)

Query: 221 TGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHA 280
           T  G  +K +   DRVAIEPGVP     +CK GRYNL   IFFCATPPD GNL R+Y+H+
Sbjct: 77  TKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPDDGNLCRFYKHS 136

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALG 340
           ADFC+KLPD V+ EEGAL+EPLSVG++ACRR  V+LG+KVL+ GAGPIG+VTLL A+A+G
Sbjct: 137 ADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVTLLVAKAMG 196

Query: 341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400
           AS+VV+ D+   +L  AKE+GAD T+ + +  +  +I+   +E + G +P+ TI+C+G E
Sbjct: 197 ASQVVVIDLSASRLAKAKEVGADFTIQVAK-ETPHDIAKK-VESVLGSKPEVTIECTGAE 254

Query: 401 STIKLGM 407
           S+++ G+
Sbjct: 255 SSVQTGI 261

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q5R5F3|DHSO_PONAB Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1

 Score =  209 bits (532), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 103/184 (55%), Positives = 138/184 (75%), Gaps = 2/184 (1%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G+ +K +   DRVAIEPG P     +CK GRYNL   IFFCATPPD GNL R+Y+H A F
Sbjct: 80  GSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF 139

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C+KLPD+V+ EEGA++EPLSVG+HACRR GVTLG KVL+ GAGPIG+VTLL A+A+GA++
Sbjct: 140 CYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQ 199

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           VV+TD+   +L  AKE+GAD  + I +  S +EI+   +E L G +P+ TI+C+G  ++I
Sbjct: 200 VVVTDLSATRLSKAKEIGADLVLQISK-ESPQEIARK-VEGLLGCKPEVTIECTGAGASI 257

Query: 404 KLGM 407
           + G+
Sbjct: 258 QAGI 261

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q02912|DHSO_BOMMO Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1

 Score =  197 bits (502), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 91/193 (47%), Positives = 140/193 (72%), Gaps = 7/193 (3%)

Query: 222 GAGNAIKV------MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSR 275
           GAG  +KV      +   DRVAIEP  PCR+C  CK G+YNLC +  +C++    GNL R
Sbjct: 67  GAGTVVKVGDKVSSLRVGDRVAIEPTQPCRSCELCKRGKYNLCVEPRYCSSMGAPGNLCR 126

Query: 276 YYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLT 335
           YY+H ADFCHKLPD++++EEGA ++PL++ +HAC RA +TLGSK++I GAGPIG++  ++
Sbjct: 127 YYKHVADFCHKLPDNLTMEEGAAVQPLAIVIHACNRAKITLGSKIVILGAGPIGILCAMS 186

Query: 336 ARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID 395
           A+A+GAS++++TD+++ +L  A E+GAD  +L+ R ++ EE+   I++LL G++PD +ID
Sbjct: 187 AKAMGASKIILTDVVQSRLDAALELGADNVLLVRREYTDEEVVEKIVKLL-GDRPDVSID 245

Query: 396 CSGIESTIKLGML 408
             G  S  ++ +L
Sbjct: 246 ACGYGSAQRVALL 258

Bombyx mori (taxid: 7091)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q1PSI9|IDND_VITVI L-idonate 5-dehydrogenase OS=Vitis vinifera GN=VIT_16s0100g00290 PE=1 SV=2

 Score =  176 bits (446), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 85/186 (45%), Positives = 124/186 (66%), Gaps = 4/186 (2%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G+ +K ++  DRVA+EPG+ C  C+ C+ G+YNLCR++ F  +PP +G+L+    H ++ 
Sbjct: 91  GSEVKNLVAGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPPTNGSLANQVVHPSNL 150

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C KLPD+VSLEEGA+ EPLSVG+HACRRA V   + VLI G+GPIGLVT+L ARA GA R
Sbjct: 151 CFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIGLVTMLAARAFGAPR 210

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRN-HSL-EEISTHIIELLQGEQPDKTIDCSGIES 401
           +V+ D+ + +L  AK++GAD  + +  N   L EE++     ++ G   D + DC G   
Sbjct: 211 IVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVTGV--DVSFDCVGFNK 268

Query: 402 TIKLGM 407
           T+   +
Sbjct: 269 TMSTAL 274

Involved in the catabolism of ascorbate to tartrate. The enzyme has no activity with NADP(+).

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q0CWQ2|XYL2_ASPTN Probable D-xylulose reductase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=xdhA PE=3 SV=1

 Score =  170 bits (430), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/187 (44%), Positives = 116/187 (62%)

Query: 221 TGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHA 280
           T  G+A+  +   DRVA+EPG+PCR C  CK G+YNLC ++ F ATPP  G L++YY   
Sbjct: 74  TKVGSAVTTLKVGDRVAMEPGIPCRRCEPCKAGKYNLCYEMAFAATPPYDGTLAKYYALP 133

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALG 340
            DFC+KLP+ ++L+EGAL+EPL V VH  R+A VT G  V++ GAGP+GL+    ARA G
Sbjct: 134 EDFCYKLPEQITLQEGALMEPLGVAVHIVRQAAVTPGQSVVVFGAGPVGLLCCAVARAFG 193

Query: 341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400
           AS++V  DI + +L+ AK   A A     +  + E  +  I E   G   D  ID SG E
Sbjct: 194 ASKIVAVDIQKPRLEFAKNYAATAIFEPAKVAAQENAARLIAENDLGPGADVAIDASGAE 253

Query: 401 STIKLGM 407
            ++  G+
Sbjct: 254 PSVHTGI 260

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	408
383855848	362	PREDICTED: sorbitol dehydrogenase-like i	0.421	0.475	0.627	3e-64
383855846	350	PREDICTED: sorbitol dehydrogenase-like i	0.450	0.525	0.627	3e-64
332021414	350	Sorbitol dehydrogenase [Acromyrmex echin	0.426	0.497	0.657	3e-63
307204829	350	Sorbitol dehydrogenase [Harpegnathos sal	0.458	0.534	0.632	5e-63
380016980	349	PREDICTED: sorbitol dehydrogenase-like i	0.450	0.527	0.627	6e-63
194902172	360	GG17814 [Drosophila erecta] gi|190652326	0.426	0.483	0.662	6e-63
17737897	360	sorbitol dehydrogenase-2 [Drosophila mel	0.426	0.483	0.662	6e-63
195499907	360	GE26061 [Drosophila yakuba] gi|194183248	0.426	0.483	0.662	7e-63
48096138	349	PREDICTED: sorbitol dehydrogenase-like i	0.450	0.527	0.627	7e-63
328791633	364	PREDICTED: sorbitol dehydrogenase-like i	0.450	0.505	0.627	8e-63

>gi|383855848|ref|XP_003703422.1| PREDICTED: sorbitol dehydrogenase-like isoform 2 [Megachile rotundata]

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 116/185 (62%), Positives = 147/185 (79%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G  +K +   DRVAIEPGV CRTC +CK GRYNLC+++ FCATPP HGNL R+Y+HAADF
Sbjct: 76  GKNVKNLKLGDRVAIEPGVSCRTCAFCKTGRYNLCKEMVFCATPPVHGNLRRFYKHAADF 135

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C KLP+HVSL EGA+LEPLSVGVHAC+RA + + SKVLI GAGPIGLVT+L A+A+GA++
Sbjct: 136 CFKLPEHVSLAEGAMLEPLSVGVHACKRADIGISSKVLILGAGPIGLVTMLAAKAMGANK 195

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           +VITD+ + KL  AK++GADAT+L+  N +  E+   I EL  GE+PDKTID  G +STI
Sbjct: 196 IVITDLTQSKLDVAKKLGADATLLVKNNMTETELVKKIHELFDGEEPDKTIDACGAQSTI 255

Query: 404 KLGML 408
           +L +L
Sbjct: 256 RLAIL 260

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855846|ref|XP_003703421.1| PREDICTED: sorbitol dehydrogenase-like isoform 1 [Megachile rotundata]

 Score =  251 bits (642), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 116/185 (62%), Positives = 147/185 (79%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G  +K +   DRVAIEPGV CRTC +CK GRYNLC+++ FCATPP HGNL R+Y+HAADF
Sbjct: 76  GKNVKNLKLGDRVAIEPGVSCRTCAFCKTGRYNLCKEMVFCATPPVHGNLRRFYKHAADF 135

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C KLP+HVSL EGA+LEPLSVGVHAC+RA + + SKVLI GAGPIGLVT+L A+A+GA++
Sbjct: 136 CFKLPEHVSLAEGAMLEPLSVGVHACKRADIGISSKVLILGAGPIGLVTMLAAKAMGANK 195

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           +VITD+ + KL  AK++GADAT+L+  N +  E+   I EL  GE+PDKTID  G +STI
Sbjct: 196 IVITDLTQSKLDVAKKLGADATLLVKNNMTETELVKKIHELFDGEEPDKTIDACGAQSTI 255

Query: 404 KLGML 408
           +L +L
Sbjct: 256 RLAIL 260

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021414|gb|EGI61782.1| Sorbitol dehydrogenase [Acromyrmex echinatior]

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 115/175 (65%), Positives = 144/175 (82%), Gaps = 1/175 (0%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRVAIEPGVPCR C++CKEGRYNLC+ + FCATPP HGNL R+Y+HAADFC KLPDH+SL
Sbjct: 86  DRVAIEPGVPCRICSHCKEGRYNLCKDVVFCATPPVHGNLRRFYKHAADFCFKLPDHISL 145

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           EEGALLEPLSVGVHAC+R  V + SKVLI GAGPIGLVTLL A+A+GA ++VITDIL+ +
Sbjct: 146 EEGALLEPLSVGVHACKRGEVGISSKVLILGAGPIGLVTLLVAKAMGAKKIVITDILQSR 205

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML 408
           L  AK++GAD T L+ ++ S E+  T I  + +GE P++TID SG +S+I+L +L
Sbjct: 206 LNIAKKLGADVTYLVQKDRSEEDTVTDIHAIFEGE-PNRTIDASGAQSSIRLAIL 259

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204829|gb|EFN83387.1| Sorbitol dehydrogenase [Harpegnathos saltator]

 Score =  248 bits (632), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 119/188 (63%), Positives = 148/188 (78%), Gaps = 1/188 (0%)

Query: 221 TGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHA 280
           T  G  +K +   DRVAIEPGV CR C +CK GRYNLC+ + FCATPP HG+L R+Y+HA
Sbjct: 73  TKLGKNVKNLKVGDRVAIEPGVSCRICKFCKTGRYNLCKDMVFCATPPVHGSLRRFYKHA 132

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALG 340
           ADFC KLPDHVSLEEGALLEPLSVGVHAC+R  V +GSKVLI GAGPIGLVTLL A+A+G
Sbjct: 133 ADFCFKLPDHVSLEEGALLEPLSVGVHACKRGSVGIGSKVLILGAGPIGLVTLLVAKAMG 192

Query: 341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400
           AS+VVITDI+E++LK AK++GAD T L+ ++ S  E    I  +  G++PD+TID SG +
Sbjct: 193 ASKVVITDIIENRLKIAKKLGADDTYLVQKDKSESETMADIHAIF-GDEPDRTIDASGAQ 251

Query: 401 STIKLGML 408
           S+I+L +L
Sbjct: 252 SSIRLAIL 259

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380016980|ref|XP_003692445.1| PREDICTED: sorbitol dehydrogenase-like isoform 1 [Apis florea]

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 116/185 (62%), Positives = 148/185 (80%), Gaps = 1/185 (0%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G  +K +   DRVAIEPGV CR C +CKEGRYNLC+++ FCATPP HG+L R+Y+HAADF
Sbjct: 76  GKNVKNLKVGDRVAIEPGVSCRYCKFCKEGRYNLCKEMVFCATPPVHGSLRRFYKHAADF 135

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C KLPDHVSL EGALLEPLSVGVHAC+RA + +GSKVLI GAGPIGLV+LL A+A+GAS+
Sbjct: 136 CFKLPDHVSLAEGALLEPLSVGVHACKRANIGIGSKVLILGAGPIGLVSLLVAKAMGASK 195

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           +VITD+++ +L  AK++GA+ T+LI ++   E+    IIEL  GE+PDKTID  G ES+I
Sbjct: 196 IVITDLMQSRLDLAKQLGANETLLIKKDDVEEKTVQKIIELF-GEEPDKTIDACGAESSI 254

Query: 404 KLGML 408
           +L + 
Sbjct: 255 RLAIF 259

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194902172|ref|XP_001980623.1| GG17814 [Drosophila erecta] gi|190652326|gb|EDV49581.1| GG17814 [Drosophila erecta]

 Score =  247 bits (631), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 116/175 (66%), Positives = 141/175 (80%), Gaps = 1/175 (0%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRVAIEPGVPCR C +CK+GRYNLC  + FCATPP  GNL+RYY+HAADFC KLPDHVS+
Sbjct: 86  DRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGNLTRYYKHAADFCFKLPDHVSM 145

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           EEGALLEPLSVGVHACRRAGV LGSKVLI GAGPIGLVTLL A+A+GAS ++ITD+++ +
Sbjct: 146 EEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASEILITDLVQQR 205

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML 408
           L  AKE+GA  T+L+ R+ S EE +  ++     E PDK+IDC G ES+ +L + 
Sbjct: 206 LDVAKELGATHTLLLQRDQSAEE-TVKVVHQTMSEVPDKSIDCCGAESSARLAIF 259

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|17737897|ref|NP_524311.1| sorbitol dehydrogenase-2 [Drosophila melanogaster] gi|4100630|gb|AAD00903.1| sorbitol dehydrogenase [Drosophila melanogaster] gi|7299382|gb|AAF54573.1| sorbitol dehydrogenase-2 [Drosophila melanogaster] gi|16198265|gb|AAL13960.1| LD47736p [Drosophila melanogaster]

 Score =  247 bits (631), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 116/175 (66%), Positives = 141/175 (80%), Gaps = 1/175 (0%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRVAIEPGVPCR C +CK+GRYNLC  + FCATPP  GNL+RYY+HAADFC KLPDHVS+
Sbjct: 86  DRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGNLTRYYKHAADFCFKLPDHVSM 145

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           EEGALLEPLSVGVHACRRAGV LGSKVLI GAGPIGLVTLL A+A+GAS ++ITD+++ +
Sbjct: 146 EEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASEILITDLVQQR 205

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML 408
           L  AKE+GA  T+L+ R+ S EE +  ++     E PDK+IDC G ES+ +L + 
Sbjct: 206 LDVAKELGATHTLLLQRDQSAEE-TVKVVHQTMSEVPDKSIDCCGAESSARLAIF 259

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195499907|ref|XP_002097147.1| GE26061 [Drosophila yakuba] gi|194183248|gb|EDW96859.1| GE26061 [Drosophila yakuba]

 Score =  247 bits (631), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 116/175 (66%), Positives = 141/175 (80%), Gaps = 1/175 (0%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRVAIEPGVPCR C +CK+GRYNLC  + FCATPP  GNL+RYY+HAADFC KLPDHVS+
Sbjct: 86  DRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGNLTRYYKHAADFCFKLPDHVSM 145

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           EEGALLEPLSVGVHACRRAGV LGSKVLI GAGPIGLVTLL A+A+GAS ++ITD+++ +
Sbjct: 146 EEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASEILITDLVQQR 205

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML 408
           L  AKE+GA  T+L+ R+ S EE +  ++     E PDK+IDC G ES+ +L + 
Sbjct: 206 LDVAKELGATHTLLLQRDQSAEE-TVKVVHQTMSEVPDKSIDCCGAESSARLAIF 259

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48096138|ref|XP_392401.1| PREDICTED: sorbitol dehydrogenase-like isoform 2 [Apis mellifera]

 Score =  247 bits (631), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 116/185 (62%), Positives = 148/185 (80%), Gaps = 1/185 (0%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G  +K +   DRVAIEPGV CR C +CKEGRYNLC+++ FCATPP HG+L R+Y+HAADF
Sbjct: 76  GKDVKNLKVGDRVAIEPGVSCRYCKFCKEGRYNLCKEMVFCATPPVHGSLRRFYKHAADF 135

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C KLPDHVSL EGALLEPLSVGVHAC+RA + +GSKVLI GAGPIGLV+LL A+A+GAS+
Sbjct: 136 CFKLPDHVSLAEGALLEPLSVGVHACKRANIGIGSKVLILGAGPIGLVSLLVAKAMGASK 195

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           +VITD+++ +L  AK++GA+ T+LI ++   E+    IIEL  GE+PDKTID  G ES+I
Sbjct: 196 IVITDLMQSRLDLAKQLGANETLLIKKDDVEEKTVQKIIELF-GEEPDKTIDACGAESSI 254

Query: 404 KLGML 408
           +L + 
Sbjct: 255 RLAIF 259

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328791633|ref|XP_003251602.1| PREDICTED: sorbitol dehydrogenase-like isoform 1 [Apis mellifera]

 Score =  247 bits (630), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 116/185 (62%), Positives = 148/185 (80%), Gaps = 1/185 (0%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G  +K +   DRVAIEPGV CR C +CKEGRYNLC+++ FCATPP HG+L R+Y+HAADF
Sbjct: 76  GKDVKNLKVGDRVAIEPGVSCRYCKFCKEGRYNLCKEMVFCATPPVHGSLRRFYKHAADF 135

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C KLPDHVSL EGALLEPLSVGVHAC+RA + +GSKVLI GAGPIGLV+LL A+A+GAS+
Sbjct: 136 CFKLPDHVSLAEGALLEPLSVGVHACKRANIGIGSKVLILGAGPIGLVSLLVAKAMGASK 195

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           +VITD+++ +L  AK++GA+ T+LI ++   E+    IIEL  GE+PDKTID  G ES+I
Sbjct: 196 IVITDLMQSRLDLAKQLGANETLLIKKDDVEEKTVQKIIELF-GEEPDKTIDACGAESSI 254

Query: 404 KLGML 408
           +L + 
Sbjct: 255 RLAIF 259

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	408
FB|FBgn0022359	360	Sodh-2 "Sorbitol dehydrogenase	0.424	0.480	0.666	1.9e-83
FB|FBgn0024289	360	Sodh-1 "Sorbitol dehydrogenase	0.424	0.480	0.643	9.4e-82
UNIPROTKB|F1P183	372	SORD "Uncharacterized protein"	0.443	0.486	0.551	1.4e-76
UNIPROTKB|Q58D31	356	SORD "Sorbitol dehydrogenase"	0.446	0.511	0.581	4.6e-76
UNIPROTKB|F1PXG0	356	SORD "Uncharacterized protein"	0.446	0.511	0.559	5.2e-75
UNIPROTKB|P07846	354	SORD "Sorbitol dehydrogenase"	0.446	0.514	0.581	2.3e-74
MGI|MGI:98266	357	Sord "sorbitol dehydrogenase"	0.453	0.518	0.556	3.7e-74
UNIPROTKB|Q00796	357	SORD "Sorbitol dehydrogenase"	0.446	0.509	0.565	1.2e-73
UNIPROTKB|F1SN27	356	SORD "Sorbitol dehydrogenase"	0.421	0.483	0.586	1.6e-73
UNIPROTKB|H0YLA4	336	SORD "Sorbitol dehydrogenase"	0.446	0.541	0.565	2e-73

FB|FBgn0022359 Sodh-2 "Sorbitol dehydrogenase-2" [Drosophila melanogaster (taxid:7227)]

 Score = 626 (225.4 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
 Identities = 116/174 (66%), Positives = 141/174 (81%)

Query:   234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
             DRVAIEPGVPCR C +CK+GRYNLC  + FCATPP  GNL+RYY+HAADFC KLPDHVS+
Sbjct:    86 DRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGNLTRYYKHAADFCFKLPDHVSM 145

Query:   294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
             EEGALLEPLSVGVHACRRAGV LGSKVLI GAGPIGLVTLL A+A+GAS ++ITD+++ +
Sbjct:   146 EEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASEILITDLVQQR 205

Query:   354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
             L  AKE+GA  T+L+ R+ S EE +  ++     E PDK+IDC G ES+ +L +
Sbjct:   206 LDVAKELGATHTLLLQRDQSAEE-TVKVVHQTMSEVPDKSIDCCGAESSARLAI 258

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0024289 Sodh-1 "Sorbitol dehydrogenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 615 (221.5 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
 Identities = 112/174 (64%), Positives = 143/174 (82%)

Query:   234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
             DRVAIEPGVPCR C +CK+G+YNLC  + FCATPP  GNL+RYY+HAADFC KLPDHV++
Sbjct:    86 DRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPPYDGNLTRYYKHAADFCFKLPDHVTM 145

Query:   294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
             EEGALLEPLSVGVHAC+RA VTLGSKVLI GAGPIGLVTL+ A+A+GAS ++ITD+++ +
Sbjct:   146 EEGALLEPLSVGVHACKRAEVTLGSKVLILGAGPIGLVTLMAAQAMGASEILITDLVQQR 205

Query:   354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
             L  AKE+GA  T+L+ R+ + EE +  +++   G QPDK+IDC G ES+ +L +
Sbjct:   206 LDVAKELGATHTLLLKRDQTAEETAV-LVQKTMGGQPDKSIDCCGAESSARLAI 258

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=NAS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1P183 SORD "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 544 (196.6 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
 Identities = 102/185 (55%), Positives = 142/185 (76%)

Query:   220 KTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRH 279
             K GAG  +  +   DRVAIEPGVP  T  +CK GRYNL   IFFCATPPD GNL RYY+H
Sbjct:    93 KVGAG--VTHLKPGDRVAIEPGVPRETDEFCKTGRYNLSPTIFFCATPPDDGNLCRYYKH 150

Query:   280 AADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
             +A +C+KLPD V+ EEGAL+EPLSVG+HAC+RAGVTLGS+V ++G+GPIGLV ++ A+ +
Sbjct:   151 SASYCYKLPDSVTFEEGALIEPLSVGIHACKRAGVTLGSRVFVSGSGPIGLVNVIIAKMM 210

Query:   340 GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGI 399
             GA+ VV+TD+   +L+TAKE+GAD T+ I +N + +E++  +  LL G  P+ T++C+G+
Sbjct:   211 GAAAVVVTDLSASRLQTAKELGADFTIQI-KNETPQEVAAKVESLL-GCMPEITVECTGV 268

Query:   400 ESTIK 404
             ++ I+
Sbjct:   269 QACIQ 273

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030317 "sperm motility" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

UNIPROTKB|Q58D31 SORD "Sorbitol dehydrogenase" [Bos taurus (taxid:9913)]

 Score = 559 (201.8 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
 Identities = 107/184 (58%), Positives = 144/184 (78%)

Query:   224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
             G+ ++ +   DRVAIEPG P  T  +CK GRYNL   IFFCATPPD GNL R+Y+H A+F
Sbjct:    79 GSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANF 138

Query:   284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
             C+KLPD+V+ EEGAL+EPLSVG+HACRRAGVTLG+KVL+ GAGPIGLV+LL A+A+GA++
Sbjct:   139 CYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVSLLAAKAMGAAQ 198

Query:   344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
             VV+TD+   +L  AKE+GAD  + I  N S +EI+  +  LL G +P+ TI+C+G+E++I
Sbjct:   199 VVVTDLSASRLSKAKEVGADFILQIS-NESPQEIAKKVEGLL-GSKPEVTIECTGVETSI 256

Query:   404 KLGM 407
             + G+
Sbjct:   257 QAGI 260

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PXG0 SORD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 544 (196.6 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
 Identities = 103/184 (55%), Positives = 142/184 (77%)

Query:   224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
             G+ +K +   DRVAIEPG       +CK GRYNL   IFFCATPPD GNL ++Y+H ADF
Sbjct:    79 GSLVKHLKSGDRVAIEPGALREMDEFCKIGRYNLSPSIFFCATPPDDGNLCQFYKHNADF 138

Query:   284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
             C+KLPD+V+ EEGAL+EPLSVG+HACRRAG+TLG+KVL+ GAGPIGLVTL+ A+A+GA +
Sbjct:   139 CYKLPDNVTYEEGALIEPLSVGIHACRRAGITLGNKVLVCGAGPIGLVTLIVAKAMGAGQ 198

Query:   344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
             V++TD+   +L  AKE+GAD  + I +  S +EI++ + ++L G +P+ TI+C+G+ES I
Sbjct:   199 VLVTDLSASRLSKAKEVGADIVLQISKE-SPKEIASKVEDML-GCKPEATIECTGVESAI 256

Query:   404 KLGM 407
             + G+
Sbjct:   257 QSGI 260

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0030317 "sperm motility" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P07846 SORD "Sorbitol dehydrogenase" [Ovis aries (taxid:9940)]

 Score = 558 (201.5 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
 Identities = 107/184 (58%), Positives = 144/184 (78%)

Query:   224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
             G+ ++ +   DRVAI+PG P +T  +CK GRYNL   IFFCATPPD GNL R+Y+H A+F
Sbjct:    77 GSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANF 136

Query:   284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
             C+KLPD+V+ EEGAL+EPLSVG+HACRRAGVTLG+KVL+ GAGPIGLV LL A+A+GA++
Sbjct:   137 CYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQ 196

Query:   344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
             VV+TD+   +L  AKE+GAD  + I  N S EEI+  +  LL G +P+ TI+C+G+E++I
Sbjct:   197 VVVTDLSASRLSKAKEVGADFILEIS-NESPEEIAKKVEGLL-GSKPEVTIECTGVETSI 254

Query:   404 KLGM 407
             + G+
Sbjct:   255 QAGI 258

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IDA

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

MGI|MGI:98266 Sord "sorbitol dehydrogenase" [Mus musculus (taxid:10090)]

 Score = 551 (199.0 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
 Identities = 104/187 (55%), Positives = 142/187 (75%)

Query:   221 TGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHA 280
             T  G  +K +   DRVAIEPGVP     YCK GRYNL   IFFCATPPD GNL R+Y+H 
Sbjct:    77 TKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGNLCRFYKHN 136

Query:   281 ADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALG 340
             ADFC+KLPD V+ EEGAL+EPLSVG++ACRR  V+LG+KVL+ GAGP+G+VTLL A+A+G
Sbjct:   137 ADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVTLLVAKAMG 196

Query:   341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400
             A++VV+TD+   +L  AKE+GAD T+ + +  + +EI++ +  LL G +P+ TI+C+G E
Sbjct:   197 AAQVVVTDLSASRLTKAKEVGADFTIQVGKE-TPQEIASKVESLL-GSKPEVTIECTGAE 254

Query:   401 STIKLGM 407
             S+++ G+
Sbjct:   255 SSVQTGI 261

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005929 "cilium" evidence=IEA

GO:0006060 "sorbitol metabolic process" evidence=IDA

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0008270 "zinc ion binding" evidence=ISO

GO:0009725 "response to hormone stimulus" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030317 "sperm motility" evidence=IDA

GO:0042802 "identical protein binding" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=ISO

GO:0046688 "response to copper ion" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO;IDA

UNIPROTKB|Q00796 SORD "Sorbitol dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 537 (194.1 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
 Identities = 104/184 (56%), Positives = 139/184 (75%)

Query:   224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
             G+++K +   DRVAIEPG P     +CK GRYNL   IFFCATPPD GNL R+Y+H A F
Sbjct:    80 GSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF 139

Query:   284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
             C+KLPD+V+ EEGAL+EPLSVG+HACRR GVTLG KVL+ GAGPIG+VTLL A+A+GA++
Sbjct:   140 CYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQ 199

Query:   344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
             VV+TD+   +L  AKE+GAD  + I +  S +EI+  +   L G +P+ TI+C+G E++I
Sbjct:   200 VVVTDLSATRLSKAKEIGADLVLQISKE-SPQEIARKVEGQL-GCKPEVTIECTGAEASI 257

Query:   404 KLGM 407
             + G+
Sbjct:   258 QAGI 261

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;IDA

GO:0008270 "zinc ion binding" evidence=ISS;IDA

GO:0006006 "glucose metabolic process" evidence=TAS

GO:0006062 "sorbitol catabolic process" evidence=IDA

GO:0051287 "NAD binding" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=NAS

GO:0016020 "membrane" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=IDA

GO:0051164 "L-xylitol metabolic process" evidence=IDA

GO:0005615 "extracellular space" evidence=TAS

GO:0030317 "sperm motility" evidence=ISS;NAS

GO:0031514 "motile cilium" evidence=ISS

UNIPROTKB|F1SN27 SORD "Sorbitol dehydrogenase" [Sus scrofa (taxid:9823)]

 Score = 539 (194.8 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
 Identities = 102/174 (58%), Positives = 138/174 (79%)

Query:   234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
             DRVAIEPG P  +  +CK GRYNL   IFFCATPPD GNL R+Y+H ++FC+KLPD+V+ 
Sbjct:    89 DRVAIEPGAPRESDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNSNFCYKLPDNVTF 148

Query:   294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
             EEGAL+EPLSVG+HACRRAGVTLG+KV + GAGPIGLV+LL A+A+GA++VV++D+   +
Sbjct:   149 EEGALIEPLSVGIHACRRAGVTLGNKVFVCGAGPIGLVSLLVAKAMGAAQVVVSDLSAAR 208

Query:   354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
             L  AKE+GAD  + I  N S +EI+  +  LL G +P+ TI+C+G+E++I+ G+
Sbjct:   209 LSKAKEVGADFILQIS-NESPQEIANQVEGLL-GCKPEVTIECTGVEASIQAGI 260

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0030317 "sperm motility" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H0YLA4 SORD "Sorbitol dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 537 (194.1 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
 Identities = 104/184 (56%), Positives = 139/184 (75%)

Query:   224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
             G+++K +   DRVAIEPG P     +CK GRYNL   IFFCATPPD GNL R+Y+H A F
Sbjct:    59 GSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF 118

Query:   284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
             C+KLPD+V+ EEGAL+EPLSVG+HACRR GVTLG KVL+ GAGPIG+VTLL A+A+GA++
Sbjct:   119 CYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQ 178

Query:   344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
             VV+TD+   +L  AKE+GAD  + I +  S +EI+  +   L G +P+ TI+C+G E++I
Sbjct:   179 VVVTDLSATRLSKAKEIGADLVLQISKE-SPQEIARKVEGQL-GCKPEVTIECTGAEASI 236

Query:   404 KLGM 407
             + G+
Sbjct:   237 QAGI 240

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q64442	DHSO_MOUSE	1, ., 1, ., 1, ., 1, 4	0.5561	0.4534	0.5182	yes	N/A
P27867	DHSO_RAT	1, ., 1, ., 1, ., 1, 4	0.5454	0.4534	0.5182	yes	N/A
Q58D31	DHSO_BOVIN	1, ., 1, ., 1, ., 1, 4	0.5815	0.4460	0.5112	yes	N/A
Q00796	DHSO_HUMAN	1, ., 1, ., 1, ., 1, 4	0.5652	0.4460	0.5098	yes	N/A
Q5R5F3	DHSO_PONAB	1, ., 1, ., 1, ., 1, 4	0.5597	0.4460	0.5098	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	408
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	6e-98
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	6e-69
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	3e-46
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-43
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-43
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	3e-43
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	5e-38
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	6e-37
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	2e-36
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	3e-36
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	1e-33
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	1e-29
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	1e-27
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	6e-26
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	9e-26
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	1e-25
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	1e-25
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	3e-25
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	2e-24
cd05281	341	cd05281, TDH, Threonine dehydrogenase	5e-24
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	2e-23
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-22
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	7e-22
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	9e-22
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	9e-22
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	8e-21
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	2e-20
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-20
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	4e-19
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	6e-19
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	7e-19
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-18
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	3e-18
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	3e-18
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-17
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	3e-17
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	5e-17
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	1e-16
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	2e-16
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	4e-16
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	5e-16
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	6e-16
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	1e-15
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	4e-15
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	4e-15
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	8e-15
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	8e-15
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	1e-14
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	6e-14
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	7e-14
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	7e-14
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	2e-13
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	2e-13
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	1e-12
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	3e-12
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	4e-12
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	5e-12
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	6e-12
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	6e-12
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	7e-12
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	8e-12
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	8e-12
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	8e-12
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	9e-12
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-11
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-11
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-11
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-11
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	2e-11
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	2e-11
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-11
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-11
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	3e-11
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	4e-11
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	6e-11
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	7e-11
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-10
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	2e-10
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	2e-10
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-10
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	3e-10
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	8e-10
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	9e-10
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	9e-10
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-09
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	2e-09
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-09
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-09
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	4e-09
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	5e-09
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	6e-09
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	7e-09
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	7e-09
cd05281	341	cd05281, TDH, Threonine dehydrogenase	1e-08
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	1e-08
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	2e-08
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	2e-08
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	2e-08
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	2e-08
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	2e-08
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	3e-08
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	3e-08
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	3e-08
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	4e-08
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	5e-08
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	6e-08
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	8e-08
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	1e-07
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-07
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-07
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	1e-07
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	2e-07
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	2e-07
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-07
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	2e-07
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	3e-07
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	3e-07
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-07
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	4e-07
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	4e-07
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	4e-07
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	5e-07
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	6e-07
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	6e-07
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	6e-07
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	6e-07
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	7e-07
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	8e-07
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	1e-06
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	1e-06
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-06
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-06
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	1e-06
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-06
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-06
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	2e-06
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	2e-06
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-06
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	2e-06
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	3e-06
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	3e-06
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	3e-06
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	3e-06
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	3e-06
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	4e-06
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	4e-06
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	5e-06
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	5e-06
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	5e-06
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	6e-06
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	7e-06
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	7e-06
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	8e-06
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	1e-05
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-05
cd05281	341	cd05281, TDH, Threonine dehydrogenase	2e-05
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	2e-05
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-05
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	2e-05
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-05
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	2e-05
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-05
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	2e-05
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	3e-05
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	4e-05
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	7e-05
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	7e-05
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	8e-05
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	9e-05
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	9e-05
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	1e-04
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-04
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-04
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-04
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	1e-04
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	1e-04
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-04
cd05281	341	cd05281, TDH, Threonine dehydrogenase	2e-04
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-04
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	2e-04
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	2e-04
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-04
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	2e-04
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-04
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-04
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	3e-04
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	3e-04
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	3e-04
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	3e-04
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	3e-04
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	3e-04
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	4e-04
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	4e-04
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	4e-04
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	4e-04
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	5e-04
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	5e-04
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	5e-04
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	5e-04
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	6e-04
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	6e-04
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	7e-04
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	8e-04
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	0.001
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	0.001
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	0.001
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	0.001
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	0.001
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	0.002
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	0.002
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	0.002
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	0.002
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	0.002
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	0.002
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	0.002
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	0.003
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	0.003
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	0.003
smart01002	149	smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT	0.003
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	0.004
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	0.004

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  295 bits (758), Expect = 6e-98
 Identities = 106/173 (61%), Positives = 125/173 (72%), Gaps = 1/173 (0%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRVAIEPGVPCRTC +CK GRYNLC  + F ATPP  G L RY  H ADFCHKLPD+VSL
Sbjct: 80  DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSL 139

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           EEGAL+EPLSVGVHACRRAGV  G  VL+ GAGPIGL+T   A+A GA++VV+TDI   +
Sbjct: 140 EEGALVEPLSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSR 199

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG 406
           L+ AKE+GA  TV +       E +  I ELL G+ PD  I+C+G ES I+  
Sbjct: 200 LEFAKELGATHTVNVRTE-DTPESAEKIAELLGGKGPDVVIECTGAESCIQTA 251

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score =  221 bits (565), Expect = 6e-69
 Identities = 93/183 (50%), Positives = 126/183 (68%), Gaps = 4/183 (2%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G+ +K ++  DRVA+EPG+ C  C  CKEGRYNLC ++ F ATPP HG+L+    H AD 
Sbjct: 89  GSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C KLP++VSLEEGA+ EPLSVGVHACRRA +   + VL+ GAGPIGLVT+L ARA GA R
Sbjct: 149 CFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPR 208

Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ--GEQPDKTIDCSGIES 401
           +VI D+ + +L  AK++GAD  VL+  N  +E++ + + E+ +  G   D + DC G   
Sbjct: 209 IVIVDVDDERLSVAKQLGADEIVLVSTN--IEDVESEVEEIQKAMGGGIDVSFDCVGFNK 266

Query: 402 TIK 404
           T+ 
Sbjct: 267 TMS 269

Length = 364

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  162 bits (412), Expect = 3e-46
 Identities = 66/174 (37%), Positives = 102/174 (58%), Gaps = 4/174 (2%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRV +EP + C TC  CK G YNLC  + F       G  + Y    A   HKLPD+V L
Sbjct: 90  DRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPL 149

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           EE AL+EPL+V  HA RR+G   G   L+ GAGPIGL+T+L  +A GAS++++++  E +
Sbjct: 150 EEAALVEPLAVAWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEAR 209

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
            + A+E+GA   +    + +  ++   + +L  G   D + DC+G+++T+   +
Sbjct: 210 RELAEELGATIVL----DPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAI 259

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  154 bits (392), Expect = 1e-43
 Identities = 67/174 (38%), Positives = 87/174 (50%), Gaps = 11/174 (6%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCA----TPPDHGNLSRYYRHAADFCHKLPD 289
            RVA+ P  PC TC YC+ GR NLC  + F       P   G    Y    A  C  LPD
Sbjct: 79  QRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPD 138

Query: 290 HVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDI 349
            +SL   AL EPL+V +HA  RAG   G +VL+TGAGPIG + +  AR  GA+ +V TD+
Sbjct: 139 GLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDL 198

Query: 350 LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
            +  L  A+ MGAD TV + R   L   +            D   + SG  + +
Sbjct: 199 ADAPLAVARAMGADETVNLAR-DPLAAYAADK------GDFDVVFEASGAPAAL 245

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  154 bits (392), Expect = 1e-43
 Identities = 64/180 (35%), Positives = 84/180 (46%), Gaps = 9/180 (5%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCAT----PPDHGNLSRYYRHAADFCHK-LP 288
           DRV +EP +PC  C YC+ G YNLC    F           G  + Y R  ADF    LP
Sbjct: 80  DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLP 139

Query: 289 DHVSLEEGALLEPLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT 347
           D +  E  AL EPL+   H    RA V  G  V++ GAGPIGL+ +  A+ LGAS V++ 
Sbjct: 140 DGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVV 199

Query: 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           D    +L+ AKE G    V+             I+EL  G   D  I+  G    +   +
Sbjct: 200 DRSPERLELAKEAGGADVVVNPSEDDAGAE---ILELTGGRGADVVIEAVGSPPALDQAL 256

Length = 350

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  153 bits (390), Expect = 3e-43
 Identities = 70/180 (38%), Positives = 99/180 (55%), Gaps = 22/180 (12%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLC--------RQIFFCATPPDHGNLSRYYRHAADFCH 285
           DRVA+ P +PC  C YCK+G Y+LC        R+          G  + Y    A    
Sbjct: 78  DRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRR---------DGAFAEYVSVPARNLI 128

Query: 286 KLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           K+PDHV  EE A++EP +V +HA R AG+TLG  V++ GAG IGL+ +   + LGA RV+
Sbjct: 129 KIPDHVDYEEAAMIEPAAVALHAVRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVI 188

Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
             DI + KL  A+E+GAD T+     +  EE    + EL +G   D  I+ +G  +TI+ 
Sbjct: 189 AVDIDDEKLAVARELGADDTI-----NPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQ 243

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  139 bits (354), Expect = 5e-38
 Identities = 53/92 (57%), Positives = 65/92 (70%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKK 201
           + ATRPGG +V+VG G  +V +PL     +EIDIRGVFRYAN YP A+ ++ASGKVDVK 
Sbjct: 252 IYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKP 311

Query: 202 LITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233
           LITH + LED + AFETA  G    IKV+I  
Sbjct: 312 LITHRFPLEDAVEAFETAAKGKKGVIKVVIEG 343

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  136 bits (346), Expect = 6e-37
 Identities = 64/182 (35%), Positives = 97/182 (53%), Gaps = 16/182 (8%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLC---RQIFFCATPPDHGNLSRYYR-----HAADFCH 285
           DRV + P VPC  C YC  G  N+C   ++          G  + Y R            
Sbjct: 79  DRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN----LYDGGFAEYVRVPAWAVKRGGVL 134

Query: 286 KLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           KLPD+VS EE AL+EPL+  ++A R+AG+  G  VL+ GAGPIGL+  + A+A GA +V+
Sbjct: 135 KLPDNVSFEEAALVEPLACCINAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVI 194

Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
           ++D+ E +L+ AK++GAD T+    + + E++   + EL  G   D  I  +G       
Sbjct: 195 VSDLNEFRLEFAKKLGADYTI----DAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQ 250

Query: 406 GM 407
            +
Sbjct: 251 AL 252

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  135 bits (342), Expect = 2e-36
 Identities = 62/172 (36%), Positives = 86/172 (50%), Gaps = 9/172 (5%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDH-GNLSRYYRHAADFCHKLPDHVS 292
           DRVA++P + C  C YC+ GR NLC      A      G  + Y    A   +K+PD++S
Sbjct: 78  DRVAVDPNIYCGECFYCRRGRPNLCEN--LTAVGVTRNGGFAEYVVVPAKQVYKIPDNLS 135

Query: 293 LEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEH 352
            EE AL EPLS  VH     G+  G  VL+ GAGPIGL+     +  GASRV + +  E 
Sbjct: 136 FEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEE 195

Query: 353 KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404
           KL+ AK++GA  TV   R            +       D  I+ +G+  T++
Sbjct: 196 KLELAKKLGATETVDPSREDPEA------QKEDNPYGFDVVIEATGVPKTLE 241

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  133 bits (337), Expect = 3e-36
 Identities = 65/176 (36%), Positives = 85/176 (48%), Gaps = 13/176 (7%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRV + P + C TC  C+E                  G  + Y    AD    LPD +SL
Sbjct: 55  DRVVVLPNLGCGTCELCRE-----LCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSL 109

Query: 294 EEGALL-EPLSVGVHACRRAG-VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE 351
           EE ALL EPL+   HA RRAG +  G  VL+ GAG +GL+    A+A GA RV++TD  +
Sbjct: 110 EEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSD 168

Query: 352 HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
            KL+ AKE+GAD  +        EE     + L  G   D  ID  G   T+   +
Sbjct: 169 EKLELAKELGADHVI-----DYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQAL 219

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  128 bits (323), Expect = 1e-33
 Identities = 66/175 (37%), Positives = 100/175 (57%), Gaps = 7/175 (4%)

Query: 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVS 292
            DRV ++P + C  C  C++GR N C  +       D G  + Y    AD    +P+ +S
Sbjct: 78  GDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRD-GGFAEYIVVPAD-ALLVPEGLS 135

Query: 293 LEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEH 352
           L++ AL+EPL++G HA RRAGVT G  VL+ GAGPIGL  +  A+A GA RV++ DI + 
Sbjct: 136 LDQAALVEPLAIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDE 194

Query: 353 KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           +L+ A+E+GAD T+ +        +     EL  GE  D  ID +G  ++++  +
Sbjct: 195 RLEFARELGADDTINVGDEDVAARLR----ELTDGEGADVVIDATGNPASMEEAV 245

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  116 bits (293), Expect = 1e-29
 Identities = 67/179 (37%), Positives = 97/179 (54%), Gaps = 13/179 (7%)

Query: 234 DRVAIEP-GVPCRTCTYCKEGRYNLC--RQIFFCATPPDHGNLSRYYRHAADFCHKLPDH 290
           DRV  E     C  C YC+ G YNLC  R+     T  D G  + Y     +  H+LP++
Sbjct: 81  DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGI--GTQAD-GGFAEYVLVPEESLHELPEN 137

Query: 291 VSLEEGALLEPLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVI-TD 348
           +SLE  AL EPL+V VHA   R+G+  G  V++ G GPIGL+    A+  GA+ VV+ T+
Sbjct: 138 LSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTE 197

Query: 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
             E +L  AKE+GADA      N   E+++  + E+  G+  D  I+CSG    ++  +
Sbjct: 198 KDEVRLDVAKELGADAV-----NGGEEDLAELVNEITDGDGADVVIECSGAVPALEQAL 251

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  111 bits (281), Expect = 1e-27
 Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 1/76 (1%)

Query: 68  ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE 127
           +L     LR  E++PI +P   EVL+ +  VGICGSDVHY  HG+IGDF + +PM++GHE
Sbjct: 3   VLHGPGDLRL-EERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHE 61

Query: 128 ASGIVSKVGAKVKHLK 143
           ++G V  VG+ V HLK
Sbjct: 62  SAGTVVAVGSGVTHLK 77

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score =  107 bits (268), Expect = 6e-26
 Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 6/176 (3%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQ-IFFCATPPDHGNLSRYYRHAAD-FCHKLPDHV 291
           DRV  E  VPC  C +C  G+Y +C++   +      +G ++ Y R   +   HK+PD +
Sbjct: 90  DRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDI 149

Query: 292 SLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE 351
             E+  L+EPL+  +HA  RA +     V++ GAGP+GL  +  AR     ++++ D+ +
Sbjct: 150 PPEDAILIEPLACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKD 209

Query: 352 HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
            +L  A++ GAD  +    N    ++   I EL  G   D  I+ +G  S ++ G+
Sbjct: 210 ERLALARKFGADVVL----NPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGL 261

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 9e-26
 Identities = 48/136 (35%), Positives = 66/136 (48%), Gaps = 4/136 (2%)

Query: 235 RVAIEPGVPCRTCTYCKEGRYNLCRQI-FFCA---TPPDHGNLSRYYRHAADFCHKLPDH 290
            VAI P  PC  C YC     N C  + FF +    P   G  +RY       C   P+ 
Sbjct: 84  TVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEK 143

Query: 291 VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
              +  A  EPL+V +HA  +AG   G +V ++G GPIG + +   + LGA+ +V  D+ 
Sbjct: 144 ADEKVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVS 203

Query: 351 EHKLKTAKEMGADATV 366
              L  A+EMGAD  V
Sbjct: 204 PRSLSLAREMGADKLV 219

Length = 343

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score =  106 bits (265), Expect = 1e-25
 Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 7/195 (3%)

Query: 214 HAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNL 273
           H F       G+ +  +   D VA  P +PC TC  C  G Y+LC +  F  +  D GN 
Sbjct: 59  HEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGN- 117

Query: 274 SRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTL 333
           + Y          LP  + +E+GA +EP++VG+HA   A    G  V+I GAG IGL+ +
Sbjct: 118 AEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAI 177

Query: 334 LTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT 393
             A ALGA  V   DI   KL  AK +GA  T      +S E  +  I  +L+  + D+ 
Sbjct: 178 QCAVALGAKSVTAIDINSEKLALAKSLGAMQTF-----NSREMSAPQIQSVLRELRFDQL 232

Query: 394 I-DCSGIESTIKLGM 407
           I + +G+  T++L +
Sbjct: 233 ILETAGVPQTVELAI 247

Length = 347

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  105 bits (265), Expect = 1e-25
 Identities = 59/172 (34%), Positives = 77/172 (44%), Gaps = 16/172 (9%)

Query: 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPD-----HGNLSRYYRHAADFCHKL 287
            DRV +   V C  C  C+ G   LC                 G  + Y          L
Sbjct: 79  GDRVMVYHYVGCGACRNCRRGWMQLCTS-----KRAAYGWNRDGGHAEYMLVPEKTLIPL 133

Query: 288 PDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVI 346
           PD +S  +GALL   +    HA RR GV+    VL+ GAGP+GL  L+ ARALGA  V+ 
Sbjct: 134 PDDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIG 193

Query: 347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
            D    +L+ AK +GAD  +      S ++    I EL  G   D  I+CSG
Sbjct: 194 VDPSPERLELAKALGADFVIN-----SGQDDVQEIRELTSGAGADVAIECSG 240

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  105 bits (263), Expect = 3e-25
 Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 10/183 (5%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFF------CATPPDHGNLSRY-YRHAADFCHK 286
           DRV    G PC  C  C  G    C           C  P   G  + + Y        +
Sbjct: 86  DRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVR 145

Query: 287 LPDHVSLEEGAL-LEPLSVGVHACRRAG-VTLGSKVLITGAGPIGLVTLLTARALGASRV 344
           +PD+V  E  A     L+  + A  RAG V  G  V++ GAGP+GL  +  A+  GA RV
Sbjct: 146 VPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRV 205

Query: 345 VITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404
           ++ D    +L+ A+E GADAT+ ID      +    + ++  G   D  I+ SG  + + 
Sbjct: 206 IVIDGSPERLELAREFGADATIDID-ELPDPQRRAIVRDITGGRGADVVIEASGHPAAVP 264

Query: 405 LGM 407
            G+
Sbjct: 265 EGL 267

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  102 bits (257), Expect = 2e-24
 Identities = 55/176 (31%), Positives = 79/176 (44%), Gaps = 13/176 (7%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQ----IFFCATPPDHGNLSRYYR--HAADFCHKL 287
           DRV++     C  C +C+ G +  C                G  + Y R  +A     K+
Sbjct: 80  DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRID--GGQAEYVRVPYADMNLAKI 137

Query: 288 PDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVI 346
           PD +  E+  +L + L  G H    AG+  GS V + GAGP+GL  +  AR LGA+R++ 
Sbjct: 138 PDGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIA 197

Query: 347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402
            D    +L  AKE GA   +    N    +I   I+EL  G   D  I+  G E T
Sbjct: 198 VDSNPERLDLAKEAGATDII----NPKNGDIVEQILELTGGRGVDCVIEAVGFEET 249

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  101 bits (254), Expect = 5e-24
 Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 11/175 (6%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCR--QIFFCATPPDHGNLSRYYRHAADFCHKLPDHV 291
           D V+ E  + C  C  C+ G Y++C+  +I    T    G  + Y     +   K    +
Sbjct: 83  DYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTD---GCFAEYVVVPEENLWKNDKDI 139

Query: 292 SLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE 351
             E  ++ EPL   VH      V+ G  VLITG GPIGL+ +  A+A GAS V+ +D   
Sbjct: 140 PPEIASIQEPLGNAVHTVLAGDVS-GKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNP 198

Query: 352 HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG 406
           ++L+ AK+MGAD  +     +  EE    +  +  G   D  ++ SG    I+ G
Sbjct: 199 YRLELAKKMGADVVI-----NPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQG 248

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =   99 bits (249), Expect = 2e-23
 Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 10/196 (5%)

Query: 214 HAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQ--IFFCATPPDHG 271
           H       G G  ++ +   D V++E  + C  C  C+ G+Y++C+   IF   T    G
Sbjct: 61  HEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD---G 117

Query: 272 NLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLV 331
             + Y    A    K P  +  E   + EPL   VH    AG   G  VL+TGAGPIGL+
Sbjct: 118 CFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL-AGPISGKSVLVTGAGPIGLM 176

Query: 332 TLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391
            +  A+A GA  V+++D  E++L+ AK+MGA   V   +   ++E++    +L  GE  D
Sbjct: 177 AIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVA----DLTDGEGVD 232

Query: 392 KTIDCSGIESTIKLGM 407
             ++ SG    ++ G+
Sbjct: 233 VFLEMSGAPKALEQGL 248

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 97.0 bits (242), Expect = 2e-22
 Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 12/166 (7%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
            RV   P + C     C  G             P   G  + Y   +     ++PD +S+
Sbjct: 90  TRVTSLPLLLCGQGASCGIGLSP--------EAP---GGYAEYMLLSEALLLRVPDGLSM 138

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           E+ AL EPL+VG+HA RRA +T G   L+ G GPIGL  +   +A G   +V +D    +
Sbjct: 139 EDAALTEPLAVGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPER 198

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGI 399
              A  MGAD  V+     S        +    G +P    +C G 
Sbjct: 199 RALALAMGADI-VVDPAADSPFAAWAAELARAGGPKPAVIFECVGA 243

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 95.3 bits (238), Expect = 7e-22
 Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 6/135 (4%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCR--QIFFCATPPDHGNLSRYYRHAADFCHKLPDHV 291
           DRV+ E  + C  C  C+ GR +LCR  +      P   G  + Y    A    K+PD +
Sbjct: 83  DRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRP---GAFAEYLVIPAFNVWKIPDDI 139

Query: 292 SLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE 351
             +  A+ +P    VH    +   +G  VLITGAGPIG++    A+ +GA  VVITD+ E
Sbjct: 140 PDDLAAIFDPFGNAVH-TALSFDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNE 198

Query: 352 HKLKTAKEMGADATV 366
           ++L+ A++MGA   V
Sbjct: 199 YRLELARKMGATRAV 213

Length = 341

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 94.9 bits (237), Expect = 9e-22
 Identities = 30/50 (60%), Positives = 39/50 (78%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +  VGICGSDVHY  HG+IGDF + +PM++GHE++G V  VG+ V HLKV
Sbjct: 29 VRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKV 78

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 95.0 bits (237), Expect = 9e-22
 Identities = 56/178 (31%), Positives = 75/178 (42%), Gaps = 17/178 (9%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRVA+   +PC  C  C+ GR NLC          D G        A      +PD V  
Sbjct: 82  DRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVP-VPDGVPF 140

Query: 294 EEG-----ALLEPLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT 347
            +      A+L P     HA  R   V  G  VL+ G G +GL  +  A+A+GA  V+  
Sbjct: 141 AQAAVATDAVLTPY----HAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAV 195

Query: 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
           DI E KL+ AKE+GAD  +      SL++          G   D   D  G + T + 
Sbjct: 196 DIKEEKLELAKELGADEVLN-----SLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFED 248

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 92.3 bits (230), Expect = 8e-21
 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 234 DRVAIE-PGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVS 292
           DRV +    + C  C YC+ G  NLC            G  + Y    A +  K+P+ + 
Sbjct: 83  DRVGVGWLVISCGECEYCRSGNENLCPNQKI-TGYTTDGGYAEYVVVPARYVVKIPEGLD 141

Query: 293 LEEGALLEPLSVGV---HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDI 349
           L E A L  L  G+    A ++A V  G  V + GAG +G + +  A+A+GA  V+    
Sbjct: 142 LAEAAPL--LCAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITR 198

Query: 350 LEHKLKTAKEMGADATV 366
            E KL+ AK++GAD  +
Sbjct: 199 SEEKLELAKKLGADHVI 215

Length = 339

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 91.4 bits (227), Expect = 2e-20
 Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKK 201
           L+ATR GG + +VG G  ++ +PL     +E+D+ GVFRY N +P+ L  + SGK+DVK 
Sbjct: 272 LEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVKP 331

Query: 202 LITHNYLL--EDTLHAFETAKTGAGNAIKVM 230
           LITH +    ++   AFET+  G GNAIKVM
Sbjct: 332 LITHRFGFSQKEVEEAFETSARG-GNAIKVM 361

Length = 364

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 91.2 bits (227), Expect = 2e-20
 Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 24/185 (12%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQ---IFFCATPPDHGNL-----SRYYR--HAADF 283
           DRV I     C TC YC++G Y+ C     I         GNL     + Y R  HA + 
Sbjct: 80  DRVLISCISSCGTCGYCRKGLYSHCESGGWIL--------GNLIDGTQAEYVRIPHADNS 131

Query: 284 CHKLPDHVSLEEGALLEPLSVGVHAC--RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
            +KLP+ V  E   +L  +    + C      V  G  V I GAGP+GL  LLTA+    
Sbjct: 132 LYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSP 191

Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401
           S++++ D+ +++L+ AK++GA  TV    N +  +    ++EL  G   D  I+  GI +
Sbjct: 192 SKIIMVDLDDNRLEVAKKLGATHTV----NSAKGDAIEQVLELTDGRGVDVVIEAVGIPA 247

Query: 402 TIKLG 406
           T +L 
Sbjct: 248 TFELC 252

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 87.7 bits (218), Expect = 4e-19
 Identities = 59/184 (32%), Positives = 79/184 (42%), Gaps = 32/184 (17%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIF---FCATPPDHGNLSRYYR-HAADF-CHKLP 288
           DRV +   + C TC YC+ G  N+C       F       G+ + Y     AD    +LP
Sbjct: 80  DRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTH----PGSFAEYVAVPRADVNLVRLP 135

Query: 289 DHVSLEEGALLEPLSVGVHACR----------RAGVTLGSKVLITGAGPIGLVTLLTARA 338
           D V     A L         CR          +A V  G  V + G G +GL  ++ A A
Sbjct: 136 DDVDFVTAAGL--------GCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASA 187

Query: 339 LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
           LGA RV+  DI + KL+ A+E+GA ATV    N S  E     +  L G     ++D  G
Sbjct: 188 LGA-RVIAVDIDDDKLELARELGAVATV----NASEVEDVAAAVRDLTGGGAHVSVDALG 242

Query: 399 IEST 402
           I  T
Sbjct: 243 IPET 246

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 86.9 bits (216), Expect = 6e-19
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 4/108 (3%)

Query: 124 VGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYAN 183
           V  EASG  + + +    L+  RPGG +V VG     V +PL   + KE+D+RG FR+ +
Sbjct: 234 VVFEASGAPAALASA---LRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDD 290

Query: 184 DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231
           ++  A+ ++A+G++DV+ LIT  + LE+   AF  A      ++KV +
Sbjct: 291 EFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAAD-RTRSVKVQL 337

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 86.5 bits (215), Expect = 7e-19
 Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 9/83 (10%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSK 134
           LR  E+ P  +P   EV + +   GICGSD+HY  HG  G  RL +PM++GHE SG+V  
Sbjct: 9   LRVEER-PAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEA 67

Query: 135 VGAKVKHLKA--------TRPGG 149
           VG  V  L          +RP G
Sbjct: 68  VGPGVTGLAPGQRVAVNPSRPCG 90

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 85.0 bits (211), Expect = 2e-18
 Identities = 54/170 (31%), Positives = 75/170 (44%), Gaps = 19/170 (11%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQI----FFCATPPDHGNLSRYYRHAADFCHKLPD 289
            RV I PG+ C  C YC  GR NLC Q              G  + Y    A     +PD
Sbjct: 83  QRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHV-----DGGYAEYVAVPARNLLPIPD 137

Query: 290 HVSLEEGALLEPLSVGV--HACR-RAGVTLGSKVLITGAGP-IGLVTLLTARALGASRVV 345
           ++S EE A   PL+     H    RA +  G  VL+ GAG  +G   +  A+  GA  V+
Sbjct: 138 NLSFEEAAAA-PLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVI 195

Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID 395
            T   E KL+ AKE+GAD  +    ++  E+    + EL      D  ++
Sbjct: 196 ATAGSEDKLERAKELGADYVI----DYRKEDFVREVRELTGKRGVDVVVE 241

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 85.3 bits (212), Expect = 3e-18
 Identities = 51/194 (26%), Positives = 71/194 (36%), Gaps = 31/194 (15%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD---FCH----- 285
           D V +     C TC YC  G+ NLC                R+          C      
Sbjct: 79  DHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFA 138

Query: 286 -----------KLPDHVSLEEGALLEPLSVGV-----HACRRAGVTLGSKVLITGAGPIG 329
                      K+ D + L+  ALL     GV          A V  G  V + G G +G
Sbjct: 139 EYTVVPEASVVKIDDDIPLDRAALL---GCGVTTGVGAVVNTARVRPGDTVAVIGCGGVG 195

Query: 330 LVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ 389
           L  +  AR  GASR++  D +  KL+ A+  GA  TV    N S ++    + +L  G  
Sbjct: 196 LNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTV----NASEDDAVEAVRDLTDGRG 251

Query: 390 PDKTIDCSGIESTI 403
            D   +  G  +TI
Sbjct: 252 ADYAFEAVGRAATI 265

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 85.3 bits (212), Expect = 3e-18
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 37/195 (18%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHA------------- 280
           DRV +   + C  C YCK G Y+ C       T P    +++ Y HA             
Sbjct: 80  DRVVVPFTIACGECFYCKRGLYSQCDN-----TNP-SAEMAKLYGHAGAGIFGYSHLTGG 133

Query: 281 -------------ADF-CHKLPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGA 325
                        AD    K+PD +S E+   L + L  G HA   A V  G  V + G 
Sbjct: 134 YAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGC 193

Query: 326 GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELL 385
           GP+GL    +A+ LGA RV+  D +  +L+ A+     A   I+    ++++   + EL 
Sbjct: 194 GPVGLFAARSAKLLGAERVIAIDRVPERLEMARSH-LGAET-INFEE-VDDVVEALRELT 250

Query: 386 QGEQPDKTIDCSGIE 400
            G  PD  ID  G+E
Sbjct: 251 GGRGPDVCIDAVGME 265

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 82.0 bits (203), Expect = 3e-17
 Identities = 56/137 (40%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRV +   +PC  C YC  G  NLCR         D G  + Y +       KLPD+VS 
Sbjct: 80  DRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVD-GGFAEYVKVPERSLVKLPDNVSD 138

Query: 294 EEGALLE-PLSVGVHACRRAGVTLGSKVLITGAGP---IGLVTLLTARALGASRVVITDI 349
           E  AL    +   VHA +RAGV  G  VL+TGAG    I  + L  A+ALGA RV+    
Sbjct: 139 ESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQL--AKALGA-RVIAVTR 195

Query: 350 LEHKLKTAKEMGADATV 366
              KLK  KE+GAD  +
Sbjct: 196 SPEKLKILKELGADYVI 212

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 81.2 bits (201), Expect = 3e-17
 Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 17/138 (12%)

Query: 276 YYRHA------ADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIG 329
           +  HA      A+    LPD +  E  AL    +  ++  R A   LG +V + G G +G
Sbjct: 51  FGPHAERVVVPANLLVPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVG 110

Query: 330 LVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ 389
           L+    A+A GA  VV  D    + + A+ +G    V  D    +      ++       
Sbjct: 111 LLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEIGGRGADVV------- 163

Query: 390 PDKTIDCSGIESTIKLGM 407
               I+ SG  S ++  +
Sbjct: 164 ----IEASGSPSALETAL 177

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 81.5 bits (202), Expect = 5e-17
 Identities = 56/182 (30%), Positives = 76/182 (41%), Gaps = 21/182 (11%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLC---------RQIFFCATPPDHGNLSRYYR--HAAD 282
           DRV +   V C  C  CK G   +C             +    P  G  + Y R  +A  
Sbjct: 79  DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADF 138

Query: 283 FCHKLPDHVSLEEGALLEPLS----VGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARA 338
              KLPD    +E      LS     G H    AGV  G  V + GAGP+GL+   +A  
Sbjct: 139 NLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAIL 198

Query: 339 LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
            GASRV + D +  +L  A+ +GA     I  + S  +    I+ L  G   D+ +DC G
Sbjct: 199 RGASRVYVVDHVPERLDLAESIGA-----IPIDFSDGDPVEQILGLEPGGV-DRAVDCVG 252

Query: 399 IE 400
            E
Sbjct: 253 YE 254

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 80.3 bits (198), Expect = 1e-16
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 13/175 (7%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHV-- 291
           D V  E  + C  C  C+ G  N C+ +       D G  + Y    A +  ++ +    
Sbjct: 113 DPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSAD-GAFAEYIAVNARYAWEINELREI 171

Query: 292 -----SLEEGALLEPLSVGVHAC--RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRV 344
                + E GAL+EP SV  +    R  G   G+ V++ GAGPIGL  +  A+A GAS+V
Sbjct: 172 YSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKV 231

Query: 345 VITDILEHKLKTAKEMGADATVLIDRNH-SLEEISTHIIELLQGEQPDKTIDCSG 398
           +  +I E +   AKEMGAD   + +            ++E+ +G   D  ++ +G
Sbjct: 232 IAFEISEERRNLAKEMGAD--YVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAG 284

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 79.8 bits (197), Expect = 2e-16
 Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 3/145 (2%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           +RVA++P + C  C  C  G+ N+C  +       D G  S Y    A   H++PD ++ 
Sbjct: 79  ERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRD-GGFSEYAVVPAKNAHRIPDAIAD 137

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTL-LTARALGASRVVITDILEH 352
           +   ++EP ++  +   R G T     LI GAGP+GL  + +         V++ D ++ 
Sbjct: 138 QYAVMVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDE 197

Query: 353 KLKTAKEMGADATVLIDRNHSLEEI 377
           +L  AKE GAD  V+ +    L E 
Sbjct: 198 RLALAKESGAD-WVINNAQEPLGEA 221

Length = 339

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 78.4 bits (194), Expect = 4e-16
 Identities = 58/182 (31%), Positives = 81/182 (44%), Gaps = 21/182 (11%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLC-RQIFFCATPPD--HGNLSRYYRHAADFCHKLPDH 290
           D V + P   C TC YC+ G  N C    F    P     G  + Y    +    KLP  
Sbjct: 83  DPVVVHPPWGCGTCRYCRRGEENYCENARF----PGIGTDGGFAEYLLVPSRRLVKLPRG 138

Query: 291 VSLEEGALLEPLS-VGV---HACRRAGVTL--GSKVLITGAGPIGLVTLLTARALGASRV 344
           +   E A   PL+  G+   HA ++A   L  GS V++ G G +G + +   RAL  + V
Sbjct: 139 LDPVEAA---PLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATV 195

Query: 345 VITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404
           +  D  E  LK A+ +GAD  VL   +  +EE+     EL  G   D  ID  G + T+ 
Sbjct: 196 IAVDRSEEALKLAERLGAD-HVLNASDDVVEEVR----ELTGGRGADAVIDFVGSDETLA 250

Query: 405 LG 406
           L 
Sbjct: 251 LA 252

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 78.3 bits (193), Expect = 5e-16
 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 5/66 (7%)

Query: 88  DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK---- 143
            H+V + M  VGICGSDVHYL   +  DF + +PM++GHE +GI+ +VG++VKHL     
Sbjct: 41  PHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDR 100

Query: 144 -ATRPG 148
            A  PG
Sbjct: 101 VALEPG 106

Length = 364

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 78.2 bits (193), Expect = 6e-16
 Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 6/108 (5%)

Query: 127 EASGIVSKVGAKVKHLKATRPGGCLVIVG-AGSQDVKIPLVLTMTKEIDIRGVFRYAN-- 183
           EA G      A  + L+A RPGG +V+VG  G +D+ +P  L ++KE+ +RG  R +   
Sbjct: 244 EAVGSPP---ALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGRE 300

Query: 184 DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231
           D+  AL ++ASGK+D +KLITH   L+D   A+E        AIKV++
Sbjct: 301 DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVL 348

Length = 350

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 72.7 bits (179), Expect = 1e-15
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 327 PIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ 386
            +GL  +  A+ALGA+RV+  D  E KL+ AKE+GAD  +    N+  E+    + EL  
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVI----NYRDEDFVERVRELTG 56

Query: 387 GEQPDKTIDCSGIESTIKLGM 407
           G   D  IDC G  +T++  +
Sbjct: 57  GRGVDVVIDCVGAPATLEQAL 77

Length = 131

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 75.4 bits (186), Expect = 4e-15
 Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 11/180 (6%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLC-RQIFFC--ATPPDHGNLSRYYR--HAADFCHKLP 288
           DRV     + C  C YC+ G+   C +   F    +P   G  + Y R   A     KLP
Sbjct: 79  DRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLP 138

Query: 289 DHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT 347
           D +S E   LL + L  G    +RA V  G  V + G GP+GL  +L+A+ LGA+RV   
Sbjct: 139 DGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAV 198

Query: 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           D +  +L+ A  +GA+       N    E    + E  +G   D  ++  G  + + L  
Sbjct: 199 DPVPERLERAAALGAEPI-----NFEDAEPVERVREATEGRGADVVLEAVGGAAALDLAF 253

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 75.9 bits (187), Expect = 4e-15
 Identities = 53/159 (33%), Positives = 71/159 (44%), Gaps = 23/159 (14%)

Query: 242 VP-CRTCTYCKEGRYNLC----------------RQIFFCATP-PDHGNLSRYYRHA--- 280
           VP C  C  C EGR  LC                R++         H  +S +  +A   
Sbjct: 94  VPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVS 153

Query: 281 ADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARA 338
                K+   V LE  AL    +  GV A    AGV  G  V + G G +GL  LL A A
Sbjct: 154 RRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVA 213

Query: 339 LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEI 377
            GAS+VV  D+ E KL  A+E+GA ATV     +++E++
Sbjct: 214 AGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQV 252

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 74.8 bits (184), Expect = 8e-15
 Identities = 29/58 (50%), Positives = 41/58 (70%)

Query: 1   MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP 58
           M  VGICGSDVHYL   +  DF + +PM++GHE +GI+ +VG++VKHL V ++    P
Sbjct: 48  MKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEP 105

Length = 364

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 75.0 bits (185), Expect = 8e-15
 Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 13/177 (7%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIF----FCATPPDHGNLSRYYR-HAADF-CHKL 287
           DRV +    P       + G  +    +     F +   D G  + Y+  + AD     L
Sbjct: 79  DRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF-SNFKD-GVFAEYFHVNDADANLAPL 136

Query: 288 PDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVI 346
           PD ++ E+  +L + +S G H    A + LG  V + G GP+GL+ +  AR  GA R++ 
Sbjct: 137 PDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIA 196

Query: 347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
                ++++ AKE GA   V    ++   ++   I++L  G+  D  I   G + T 
Sbjct: 197 VGSRPNRVELAKEYGATDIV----DYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTF 249

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)

Query: 88  DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 143
             EVL+ +   GICGSD+H           +  P+I+GHE +GIV +VG  V  LK
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEP---PPVKLPLILGHEGAGIVEEVGPGVTGLK 53

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 72.5 bits (178), Expect = 6e-14
 Identities = 47/183 (25%), Positives = 69/183 (37%), Gaps = 25/183 (13%)

Query: 244 CRTCTYCKEGRYNLCRQIF-FCATPPDHGNLSRYYRHAADFCH----------------- 285
           C  C  C   R NLC +              SR+        H                 
Sbjct: 89  CGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEIS 148

Query: 286 --KLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
             K+     LE+  L+    S G  A    A VT GS   + G G +GL  ++  +A GA
Sbjct: 149 LAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGA 208

Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401
           SR++  DI + K + AK++G  AT  I+     + I   + E+  G   D   +  G   
Sbjct: 209 SRIIAVDINKDKFEKAKQLG--ATECINPRDQDKPIVEVLTEMTDG-GVDYAFEVIGSAD 265

Query: 402 TIK 404
           T+K
Sbjct: 266 TLK 268

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 71.9 bits (177), Expect = 7e-14
 Identities = 25/51 (49%), Positives = 31/51 (60%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVD 51
          +   GICGSD+HY  HG  G  RL +PM++GHE SG+V  VG  V  L   
Sbjct: 28 VAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPG 78

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 71.6 bits (176), Expect = 7e-14
 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 299 LEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK 358
            EPL   ++  RR  +  G  V + GAG IGL+ L  A A GA RV+  D    +L  A+
Sbjct: 112 GEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR 171

Query: 359 EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
           E+GA   V  D    +E +     EL  G   D  I+  G +  + L
Sbjct: 172 ELGATEVVTDDSEAIVERVR----ELTGGAGADVVIEAVGHQWPLDL 214

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 70.3 bits (173), Expect = 2e-13
 Identities = 45/140 (32%), Positives = 60/140 (42%), Gaps = 14/140 (10%)

Query: 234 DRVAIEPGVP-----CRTCTYCKEGRYNLCRQIFFCATPPD-HGNLSRYYRHAADFCHKL 287
           DRV    GVP     C  C YC+ GR NLC       T     G  + Y      F + +
Sbjct: 84  DRV----GVPWLGSTCGECRYCRSGRENLCDN--ARFTGYTVDGGYAEYMVADERFAYPI 137

Query: 288 PDHVSLEEGA-LLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVI 346
           P+    EE A LL    +G  A + AG+  G ++ + G G    + L  AR  GA     
Sbjct: 138 PEDYDDEEAAPLLCAGIIGYRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAF 197

Query: 347 TDILEHKLKTAKEMGADATV 366
           T   EH  + A+E+GAD   
Sbjct: 198 TRSGEH-QELARELGADWAG 216

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 70.6 bits (174), Expect = 2e-13
 Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 13/170 (7%)

Query: 234 DRVAIEP-GVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVS 292
           DRV ++     C  C YC+ G   LC          D G  + Y    A +   +PD +S
Sbjct: 82  DRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVD-GTFAEYAIADARYVTPIPDGLS 140

Query: 293 LEEGALLEPLSVGV---HACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348
            E+ A L  L  GV    A ++AG+  G  V+I+GA G +G + +  A+A+G  RV+  D
Sbjct: 141 FEQAAPL--LCAGVTVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAID 197

Query: 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
           + + KL+ AKE+GADA V   +     +    + EL  G      +  + 
Sbjct: 198 VGDEKLELAKELGADAFVDFKK----SDDVEAVKELTGGGGAHAVVVTAV 243

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 68.6 bits (168), Expect = 1e-12
 Identities = 57/200 (28%), Positives = 80/200 (40%), Gaps = 37/200 (18%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNL----SRYYRHA--------- 280
           DRV     +PC  C YC  G+ NLC    F A     G L    +R +R           
Sbjct: 82  DRVVGSFIMPCGKCRYCARGKENLCED--FFAYNRLKGTLYDGTTRLFRLDGGPVYMYSM 139

Query: 281 ---ADFC-------HKLPDHVSLEEGALLEPLSVGV----HACRRAG-VTLGSKVLITGA 325
              A++          LP+ +   E A    L         A + A  V  G  V + G 
Sbjct: 140 GGLAEYAVVPATALAPLPESLDYTESA---VLGCAGFTAYGALKHAADVRPGETVAVIGV 196

Query: 326 GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELL 385
           G +G   +  A+A GAS ++  D+ + KL  AKE+GA  TV    N + E+    I E+ 
Sbjct: 197 GGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV----NAAKEDAVAAIREIT 252

Query: 386 QGEQPDKTIDCSGIESTIKL 405
            G   D  ++  G   T KL
Sbjct: 253 GGRGVDVVVEALGKPETFKL 272

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 66.9 bits (164), Expect = 3e-12
 Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 22/183 (12%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQ-----IFFCATPPDHGNLSRYYRHAADFCHKLP 288
           D+V + P + C  C  C  G  NLC +     IF        G  + Y           P
Sbjct: 92  DKVLVYPWIGCGECPVCLAGDENLCAKGRALGIF------QDGGYAEYVIVPHSRYLVDP 145

Query: 289 DHVSLEEGALLEPLSVGV---HACRRAGVTLGSK-VLITGAGPIGLVTLLTARALGASRV 344
             +     A L   S G+    A ++    +  + V+I GAG +GL+ L   +ALG + +
Sbjct: 146 GGLDPALAATL-ACS-GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANI 203

Query: 345 VITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404
           ++ DI E KL+ AK  GAD  V    N S  + +  II+   G   D  ID     +T  
Sbjct: 204 IVVDIDEAKLEAAKAAGADVVV----NGSDPDAAKRIIKAAGG-GVDAVIDFVNNSATAS 258

Query: 405 LGM 407
           L  
Sbjct: 259 LAF 261

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 66.5 bits (163), Expect = 4e-12
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 6/67 (8%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVH-YLTHGQIGDFRLSDPMIVGHEASGIVSKVGA 137
           E  P  +P   EVL+++   GICGSD+  YL  G         P+++GHE SG V +VG+
Sbjct: 15  EDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-----AYHPPLVLGHEFSGTVEEVGS 69

Query: 138 KVKHLKA 144
            V  L  
Sbjct: 70  GVDDLAV 76

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 66.4 bits (163), Expect = 5e-12
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           ++DP   EVL+ +   G+C SD+H +T    GD     P ++GHE +G+V +VG  V  +
Sbjct: 20  LDDPGPGEVLVRIAAAGLCHSDLHVVT----GDLPAPLPAVLGHEGAGVVEEVGPGVTGV 75

Query: 143 K 143
           K
Sbjct: 76  K 76

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 66.1 bits (162), Expect = 6e-12
 Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 33/178 (18%)

Query: 243 PCRTCTYCKEGRYNLCRQIFFCATPP--------DHGNLSRYYRHAADFCHKLPDHVSLE 294
           P   C  C+ GR +      FC T           HG +  Y+    ++  K+P  ++ +
Sbjct: 91  PPGKCLNCRIGRPD------FCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D 143

Query: 295 EGALLEPLSVGVHA-------CRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVI- 346
            G LLEPLSV   A        +R       + L+ GAGPIGL+  L  R  G    V+ 
Sbjct: 144 VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLN 203

Query: 347 -TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
             D  + K    +E+G  AT +      + E+           + D  I+ +G+    
Sbjct: 204 RRDPPDPKADIVEELG--ATYVNSSKTPVAEVKLV-------GEFDLIIEATGVPPLA 252

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 66.0 bits (162), Expect = 6e-12
 Identities = 43/191 (22%), Positives = 70/191 (36%), Gaps = 35/191 (18%)

Query: 244 CRTCTYCKEGRYNLCRQI----FFCATP------------PDHGN------LSRYYRHAA 281
           C  C  C  G    C       F    P            P HG+       + Y     
Sbjct: 90  CGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHE 149

Query: 282 DFCHKLPDHVSLEEGALLEPLSVGVHA-----CRRAGVTLGSKVLITGAGPIGLVTLLTA 336
               K+   V LE   LL PL  G+               GS + + GAG +GL  ++ A
Sbjct: 150 RNVVKVDKDVPLE---LLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAA 206

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396
           +  G + ++  DI++ +L+ AKE+GA   +       +  I       + G   D  +D 
Sbjct: 207 KIAGCTTIIAVDIVDSRLELAKELGATHVINPKEEDLVAAIR-----EITGGGVDYALDT 261

Query: 397 SGIESTIKLGM 407
           +G+ + I+  +
Sbjct: 262 TGVPAVIEQAV 272

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 65.6 bits (161), Expect = 7e-12
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 7/108 (6%)

Query: 127 EASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQD--VKIPLVLTMTKEIDIRGVFRYAND 184
           EA+G+   +   ++     R GG +++ G  + D  V I       KE+ I G F     
Sbjct: 232 EATGVPKTLEQAIE---YARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYT 288

Query: 185 YPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
           +P A+A++ SGK+DVK L++H   LE+   A E  +  +G A+KV++ 
Sbjct: 289 FPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMR--SGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 65.3 bits (160), Expect = 8e-12
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 78  REQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGA 137
            E+ P+ +P   EVL+++   G+C SD+H L  G         P+ +GHE +G V +VGA
Sbjct: 16  LEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGG--VPTLTKLPLTLGHEIAGTVVEVGA 73

Query: 138 KVKHLKATRPGGCLVIVGAG 157
            V + K     G  V V A 
Sbjct: 74  GVTNFKV----GDRVAVPAV 89

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 61.1 bits (149), Expect = 8e-12
 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   GICGSD+H           +  P+I+GHE +GIV +VG  V  LKV
Sbjct: 8  VKAAGICGSDLHIYRGEP---PPVKLPLILGHEGAGIVEEVGPGVTGLKV 54

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 65.8 bits (161), Expect = 8e-12
 Identities = 53/182 (29%), Positives = 78/182 (42%), Gaps = 24/182 (13%)

Query: 244 CRTCTYCKEGRYNLCRQ--IFFCATPPD-------------H----GNLSRYYRHAADFC 284
           C  C+ C+ G+ NLC++         PD             H       S+Y     ++ 
Sbjct: 91  CGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYV 150

Query: 285 HKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGAS 342
            K+     LE   LL    S G  A    A V  GS V + G G +GL  ++ A+  GAS
Sbjct: 151 AKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGAS 210

Query: 343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402
           R++  DI E K + AKE G  AT  I+   S + +S  I E+  G   D + +C+G    
Sbjct: 211 RIIGVDINEDKFEKAKEFG--ATDFINPKDSDKPVSEVIREMTGG-GVDYSFECTGNADL 267

Query: 403 IK 404
           + 
Sbjct: 268 MN 269

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 65.3 bits (160), Expect = 9e-12
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 12/114 (10%)

Query: 127 EASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLT---MTKEIDIRGVFRY-- 181
           EA+G  + +      L   RPGG +V+VG    DV +        + KE+ I+G +    
Sbjct: 233 EAAGSPATIEQA---LALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYS 289

Query: 182 ----ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231
                +++  AL ++ASGK+ V+ LITH   LED   AFE        + KV++
Sbjct: 290 APFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 65.0 bits (159), Expect = 1e-11
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 16/141 (11%)

Query: 234 DRVAIEPGVP-----CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLP 288
           DRV    GV      C  C YC+ G  NLC++          G  + Y    A++   LP
Sbjct: 79  DRV----GVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQ-GGYAEYMVADAEYTVLLP 133

Query: 289 DHVSLEEGALLEPLSVGV---HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           D + L + A L  L  G+    A R AG   G +V + G G +G + +  ARA+G   V 
Sbjct: 134 DGLPLAQAAPL--LCAGITVYSALRDAGPRPGERVAVLGIGGLGHLAVQYARAMGFETVA 191

Query: 346 ITDILEHKLKTAKEMGADATV 366
           IT     K + A+++GAD  V
Sbjct: 192 IT-RSPDKRELARKLGADEVV 211

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 65.3 bits (160), Expect = 1e-11
 Identities = 50/183 (27%), Positives = 66/183 (36%), Gaps = 34/183 (18%)

Query: 243 PCRTCTYCKEGRYNLCRQIF---FCATPPD-----HGNLSRYYRHA------ADF----- 283
            C  C +C  G+ NLC  I       T PD      GN      H       A++     
Sbjct: 90  ECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGN-GVPVYHYLGCSTFAEYTVVHE 148

Query: 284 --CHKLPDHVSLEEGALLEPLSVGV-----HACRRAGVTLGSKVLITGAGPIGLVTLLTA 336
               K+     LE+  LL     GV          A V  G  V + G G +GL  +  A
Sbjct: 149 ISLVKIDPDAPLEKACLL---GCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGA 205

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396
           +A GA R++  DI   KL+ AK+ GA   V    N    +     I  L     D   +C
Sbjct: 206 KAAGAGRIIAVDINPEKLELAKKFGATHFV----NPKEVDDVVEAIVELTDGGADYAFEC 261

Query: 397 SGI 399
            G 
Sbjct: 262 VGN 264

Length = 366

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 64.5 bits (158), Expect = 2e-11
 Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 142 LKATRPGGCLVIVGA--GSQDVKIPLVLTMTKEIDIRGVFRYAN-DYPIALAMVASGKVD 198
           L+  R GG ++  G       V I   L   +EI I G +  +  DY  AL ++ASGK+D
Sbjct: 252 LELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKID 311

Query: 199 VKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
           VK LITH + LED   AFE A    G ++K++I 
Sbjct: 312 VKDLITHRFPLEDIEEAFELAAD--GKSLKIVIT 343

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 64.5 bits (158), Expect = 2e-11
 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 146 RPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYAN--DYPIALAMVASGKVDVKKLI 203
             GG +V+VG     V  P      KE+ I G  R A   D+P  + ++ SGKVD + LI
Sbjct: 249 AHGGRVVLVGLSKGPVTFPDPEFHKKELTILGS-RNATREDFPDVIDLLESGKVDPEALI 307

Query: 204 THNYLLEDTLHAFETAKTGAGNAIKVMIH 232
           TH +  ED   AF+  +   G  IKV+I 
Sbjct: 308 THRFPFEDVPEAFDLWEAPPGGVIKVLIE 336

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 2e-11
 Identities = 18/52 (34%), Positives = 33/52 (63%)

Query: 87  DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           +++  L+++   GICGSD+HY   G++G+F +  PM++GHE  G +    + 
Sbjct: 26  NNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHSDSS 77

Length = 343

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 64.9 bits (158), Expect = 2e-11
 Identities = 60/192 (31%), Positives = 86/192 (44%), Gaps = 36/192 (18%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDH--------------GNLSRY--- 276
           D V++   + C  C  CKEG   +C  +      P                G  S Y   
Sbjct: 87  DIVSVPFNIACGRCRNCKEGHTGVCLNV-----NPARAGAAYGYVDMGGWVGGQSEYVMV 141

Query: 277 -YRHAADF-CHKLPDH-VSLEEGALLEPLS----VGVHACRRAGVTLGSKVLITGAGPIG 329
            Y   ADF   K PD   +LE+   L  LS     G H    AGV  GS V I GAGP+G
Sbjct: 142 PY---ADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVG 198

Query: 330 LVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ 389
           L    +A+ LGA+ V++ D+   +L  A+  G + TV + ++ +L E    I ++L   +
Sbjct: 199 LAAAASAQLLGAAVVIVGDLNPARLAQARSFGCE-TVDLSKDATLPE---QIEQILGEPE 254

Query: 390 PDKTIDCSGIES 401
            D  +DC G E+
Sbjct: 255 VDCAVDCVGFEA 266

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 8/142 (5%)

Query: 262 FFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALL--EPLSVGVHACRRAGVTLGSK 319
                    G  + Y    AD+   LPD +S EE A L    L+  +    RAG+  G  
Sbjct: 86  AALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGET 145

Query: 320 VLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIS 378
           VL+ GA G +G   +  A+ALGA  VV       KL+  KE+GAD  +       +E++ 
Sbjct: 146 VLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYREEDFVEQVR 204

Query: 379 THIIELLQGEQPDKTIDCSGIE 400
               EL  G+  D  +D  G +
Sbjct: 205 ----ELTGGKGVDVVLDTVGGD 222

Length = 326

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 14/171 (8%)

Query: 235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLE 294
           RV  E  + C  C YC+ G Y  C            G  + Y     +  H +PD V  E
Sbjct: 74  RVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDE 133

Query: 295 EGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKL 354
           +    EPL+  +    +  +T G KV + G G +GL+        G   V++      KL
Sbjct: 134 QAVFAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGR-HSEKL 192

Query: 355 KTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
             A+ +G +  +  +                +G   D  ++ +G  S ++L
Sbjct: 193 ALARRLGVETVLPDE-------------AESEGGGFDVVVEATGSPSGLEL 230

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 64.1 bits (157), Expect = 3e-11
 Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 23/149 (15%)

Query: 234 DRVAIEPGV-----PCRTCTYCKEGRYNLCRQ--IFFCATPPD----HGNLSRYYRHAAD 282
           DRV    GV      C TC  CK G    C +  + +    PD     G  + +      
Sbjct: 79  DRV----GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDER 134

Query: 283 FCHKLPDHVSLEEGALLEPLSVG---VHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARA 338
           F  K+P+ +     A   PL      V++  +R GV  G +V + G G +G + +  A+A
Sbjct: 135 FVFKIPEGLDSAAAA---PLLCAGITVYSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKA 191

Query: 339 LGASRVVITDILEHKLKTAKEMGADATVL 367
           LGA     +     K + A ++GAD  + 
Sbjct: 192 LGAEVTAFSRS-PSKKEDALKLGADEFIA 219

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 63.3 bits (155), Expect = 4e-11
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 79  EQKPIE--DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKV 135
           E    E       +V +++   G+C SD+H L      ++  +  P++ GHE  GIV  V
Sbjct: 13  EPFTFERRPLGPDDVDIKITYCGVCHSDLHTLR----NEWGPTKYPLVPGHEIVGIVVAV 68

Query: 136 GAKVKHLK 143
           G+KV   K
Sbjct: 69  GSKVTKFK 76

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 62.9 bits (154), Expect = 6e-11
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           E+ P+ +P   EVL+++   GICG+D+H       G+F  + P++ GHE +G+V  VG+K
Sbjct: 15  EEVPVPEPGPDEVLIKVAACGICGTDLHIYE----GEFGAAPPLVPGHEFAGVVVAVGSK 70

Query: 139 VKHLK 143
           V   K
Sbjct: 71  VTGFK 75

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 62.0 bits (151), Expect = 7e-11
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 90  EVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA 144
           EVL+ +   G+CG+D+H    G         P+I+GHE +G+V +VG  V  +K 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGG--YPPPPKLPLILGHEGAGVVVEVGPGVTGVKV 53

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSK 134
               E+ P   P   +VL+ +   GICGSD+H    G+   F     +I+GHE  G V +
Sbjct: 12  DVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEP--FVPPGDIILGHEFVGEVVE 69

Query: 135 VGAKVKHLKATR 146
           VG         R
Sbjct: 70  VGVVRGFKVGDR 81

Length = 350

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           E+ P+ +P   EVL+++   G+C +D+H +  G     +L  P+I GHE  G V +VG  
Sbjct: 19  EEVPVPEPGPGEVLIKVEACGVCHTDLH-VAKGDWPVPKL--PLIPGHEIVGTVVEVGEG 75

Query: 139 VKHLKATRPGGCLVIVG 155
           V  LK     G  V VG
Sbjct: 76  VTGLKV----GDRVGVG 88

Length = 339

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 61.4 bits (150), Expect = 2e-10
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           ++DP   EVL+ +   GIC +D+      + G      P ++GHE +G+V  VG+ V  L
Sbjct: 22  LDDPRPDEVLVRIVATGICHTDLV----VRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGL 77

Query: 143 KA 144
           K 
Sbjct: 78  KP 79

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 9/119 (7%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLC--RQIFFCATPPDHGNLSRYYRHAADFCHKLPDHV 291
           DRVA     P  TC YC+ G    C  R  +        G  + Y +       K+P +V
Sbjct: 80  DRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELD---GFFAEYAKVKVTSLVKVPPNV 136

Query: 292 SLEEGALLEP--LSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT 347
           S +EGA++ P    +     RRAGV  G  VL+TGA G +G+  +  A+ALGA  + +T
Sbjct: 137 S-DEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVT 194

Length = 334

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 45/177 (25%), Positives = 66/177 (37%), Gaps = 33/177 (18%)

Query: 243 PCRTCTYCKEGRYNLC---RQIFFCATPPDH-----------------GNLSRYYRHAAD 282
            C  C +C  G  NLC     +   +   D                  G  S Y      
Sbjct: 90  ACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFHADGQDVGQMCLLGTFSEYTVVPEA 149

Query: 283 FCHKLPDHVSLEEGALLEPLSVGV-----HACRRAGVTLGSKVLITGAGPIGLVTLLTAR 337
              K+ D + L++  L+     GV      A   A V  G  V++ G G +G+  +  A 
Sbjct: 150 SVVKIDDDIPLDKACLV---GCGVPTGWGSAVNIADVRPGDTVVVMGIGGVGINAVQGAA 206

Query: 338 ALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394
             GA +V+  D +E K + A + GA          S+EE    + EL  G+  DKTI
Sbjct: 207 VAGARKVIAVDPVEFKREQALKFGATHAF-----ASMEEAVQLVRELTNGQGADKTI 258

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 59.4 bits (145), Expect = 8e-10
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)

Query: 2  HCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGAKVKHLKV 50
          +C G+C SD+H L      ++  +  P++ GHE  GIV  VG+KV   KV
Sbjct: 33 YC-GVCHSDLHTLR----NEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKV 77

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 59.3 bits (144), Expect = 9e-10
 Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 71  RRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASG 130
           R   LR   + P+  P   EVLL +   G+CGSD+HY  HG          +I GHE +G
Sbjct: 10  RTVELR---EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAP--AYQGVIPGHEPAG 64

Query: 131 IVSKVGAKVKH 141
           +V  VG  V H
Sbjct: 65  VVVAVGPGVTH 75

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 59.2 bits (144), Expect = 9e-10
 Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 13/168 (7%)

Query: 244 CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAADFCHKLPDHVSLEEG----- 296
             TC +C+ G    C    F     D G    Y R   A     K+P   S +E      
Sbjct: 89  DGTCPFCRAGFTTSCVHGGFWGAFVD-GGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSL 147

Query: 297 -ALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLK 355
            AL + +  G HA   AGV  GS V++ G G +GL  +L A+ LGA R++     E +  
Sbjct: 148 LALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQA 207

Query: 356 TAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
            A+E GA   V  +R    EE    + EL  G   D  ++C G + ++
Sbjct: 208 LAREFGATDIV-AERG---EEAVARVRELTGGVGADAVLECVGTQESM 251

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           E+ P+ +P   EVL+++   GICG+DV  +  G      L  P I+GHE +G + +VG  
Sbjct: 15  EEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGH---TDLKPPRILGHEIAGEIVEVGDG 71

Query: 139 VKHLKA 144
           V   K 
Sbjct: 72  VTGFKV 77

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 58.2 bits (141), Expect = 2e-09
 Identities = 17/42 (40%), Positives = 26/42 (61%)

Query: 3  CVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 44
            GICGSD+HY   G++G+F +  PM++GHE  G +    + 
Sbjct: 36 RGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHSDSS 77

Length = 343

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 58.3 bits (142), Expect = 2e-09
 Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 6/101 (5%)

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVGV--HAC-RRAGVTLGSKVLITGA-GPIGLVTLLTA 336
           A     LPD +S EE A L P++ G   HA  RRA +  G  VL+ GA G +GL  +  A
Sbjct: 102 AAAVFPLPDGLSFEEAAAL-PVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLA 160

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEI 377
           +ALGA RV+     E KL  A+ +GAD  +        E +
Sbjct: 161 KALGA-RVIAAASSEEKLALARALGADHVIDYRDPDLRERV 200

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 57.5 bits (140), Expect = 3e-09
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 78  REQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD--PMIVGHEASGIVSKV 135
            +  P+ +P   EVL+++   G+C +D+H       GD+ +    P+I GHE +G+V  V
Sbjct: 16  VKDVPVPEPGPGEVLVKLEASGVCHTDLHAAL----GDWPVKPKLPLIGGHEGAGVVVAV 71

Query: 136 GAKVKHLK 143
           G  V  LK
Sbjct: 72  GPGVSGLK 79

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 57.2 bits (138), Expect = 4e-09
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 82  PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH 141
           P+ +P   EVL+++    ICG+DVH     +    R+  P +VGHE +G V  +G  V+ 
Sbjct: 17  PVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEG 76

Query: 142 LK 143
           +K
Sbjct: 77  IK 78

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 57.2 bits (139), Expect = 5e-09
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 2  HCVGICGSDVH-YLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
             GICGSD+  YL  G         P+++GHE SG V +VG+ V  L V
Sbjct: 32 KACGICGSDIPRYLGTG-----AYHPPLVLGHEFSGTVEEVGSGVDDLAV 76

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 56.9 bits (138), Expect = 6e-09
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 5   GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC 64
           G+C SD+H L  G         P+ +GHE +G V +VGA V + KV +  R        C
Sbjct: 37  GVCHSDLHILDGG--VPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGD--RVAVPAVIPC 92

Query: 65  LSPILRRR 72
            +  L RR
Sbjct: 93  GACALCRR 100

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 56.8 bits (138), Expect = 7e-09
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 9/77 (11%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQI-----GDFRLSD---PMIVGH 126
           +R  E+ P       EV +++   GICGSD+H    G I     G   L+    P+ +GH
Sbjct: 12  IRV-EEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGH 70

Query: 127 EASGIVSKVGAKVKHLK 143
           E SG+V +VG+ V   K
Sbjct: 71  EFSGVVVEVGSGVTGFK 87

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 56.2 bits (136), Expect = 7e-09
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+CG+D+H    G         P+I+GHE +G+V +VG  V  +KV
Sbjct: 6  VEAAGLCGTDLHIRRGG--YPPPPKLPLILGHEGAGVVVEVGPGVTGVKV 53

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 55.7 bits (135), Expect = 1e-08
 Identities = 23/65 (35%), Positives = 35/65 (53%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
            + P+  P   EVL+++    ICG+DVH     +    R+  P+I GHE +G V +VG  
Sbjct: 16  VEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEG 75

Query: 139 VKHLK 143
           V  +K
Sbjct: 76  VTRVK 80

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKL 287
           DRV + P +PC  C  C+EGR NLC    F     D G  + Y    A     L
Sbjct: 56  DRVVVYPLIPCGKCAACREGRENLCPNGKFLGVHLD-GGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 55.6 bits (135), Expect = 2e-08
 Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 2/93 (2%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY-ANDYPIALAMVASGKVDVK 200
           + A RP G  V V    + +       + KE  + G   Y   D+   + ++ASGK+D +
Sbjct: 259 IDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKIDAE 318

Query: 201 KLITHNYLLEDTL-HAFETAKTGAGNAIKVMIH 232
            LIT    LED +   FE         +K+++ 
Sbjct: 319 PLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 55.6 bits (135), Expect = 2e-08
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 4/46 (8%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          GICG+D+H       G+F  + P++ GHE +G+V  VG+KV   KV
Sbjct: 35 GICGTDLHIYE----GEFGAAPPLVPGHEFAGVVVAVGSKVTGFKV 76

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 4/108 (3%)

Query: 124 VGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYAN 183
           V  E SG  S +      L+ TR  G +V VG G    + P++  + KEI ++G FR+  
Sbjct: 238 VSFEVSGHPSSI---NTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTE 294

Query: 184 DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231
           ++  A++ +A+G ++   L++  Y   D   A   A      A KV +
Sbjct: 295 EFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFA-GDKTQAAKVQL 341

Length = 343

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           E+ P+ +P   EVL+++   G+C +D+H    G  G      P++ GHE  G V +VGA 
Sbjct: 15  EEVPVPEPGPGEVLIKIEACGVCHTDLH-AAEGDWGG--SKYPLVPGHEIVGEVVEVGAG 71

Query: 139 VKHLKA 144
           V+  K 
Sbjct: 72  VEGRKV 77

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 55.3 bits (134), Expect = 2e-08
 Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 25/177 (14%)

Query: 244 CRTCTYCKEGRYNLCRQI---------------FFCATPPDH-----GNLSRYYRHAADF 283
           C  C +CK G+ NLC++I               F C   P +        S Y   A   
Sbjct: 92  CGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEIS 151

Query: 284 CHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
             K+     L++  LL   ++ G  A    A V  GS V + G G +GL  +  A+A GA
Sbjct: 152 VAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGA 211

Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
           SR++  DI   K + AK+ G  AT  ++     + I   ++E+  G   D T +C G
Sbjct: 212 SRIIGIDINPDKFELAKKFG--ATDCVNPKDHDKPIQQVLVEMTDG-GVDYTFECIG 265

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 54.7 bits (132), Expect = 3e-08
 Identities = 41/167 (24%), Positives = 57/167 (34%), Gaps = 34/167 (20%)

Query: 4   VGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNV 63
            GICGSD+H    G+   F     +I+GHE  G V +VG  V+  KV    R V E    
Sbjct: 35  TGICGSDLHIYRGGEP--FVPPGDIILGHEFVGEVVEVGV-VRGFKVG--DRVVVEPNIP 89

Query: 64  CLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFR------ 117
           C             R  +     +           GI G    Y+      +        
Sbjct: 90  C-------GHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI 142

Query: 118 ------LSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGS 158
                 L++P+   +                 A RPGG +V+VGAG 
Sbjct: 143 DEEAAALTEPLATAYHG----------HAERAAVRPGGTVVVVGAGP 179

Length = 350

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 54.9 bits (133), Expect = 3e-08
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+C SD+H +T    GD     P ++GHE +G+V +VG  V  +K 
Sbjct: 32 IAAAGLCHSDLHVVT----GDLPAPLPAVLGHEGAGVVEEVGPGVTGVKP 77

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 54.5 bits (132), Expect = 3e-08
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           ++ P   EVL+ +   G+C +D H L+    GD     P ++GHE +GIV  VG  V  +
Sbjct: 22  LDPPRAGEVLVRITATGVCHTDAHTLS----GDDPEGFPAVLGHEGAGIVEAVGEGVTSV 77

Query: 143 K 143
           K
Sbjct: 78  K 78

Length = 366

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 54.2 bits (131), Expect = 4e-08
 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 7/63 (11%)

Query: 86  PDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKAT 145
           P  HEV +++   GIC SD H ++    G      P+I+GHEA+GIV  VG  V  +K  
Sbjct: 30  PKAHEVRIKIVATGICRSDDHVVS----GKLVTPFPVILGHEAAGIVESVGEGVTTVK-- 83

Query: 146 RPG 148
            PG
Sbjct: 84  -PG 85

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 54.2 bits (131), Expect = 5e-08
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 81  KPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK 140
           KPI     ++ ++    V  C SDVH +  G  G+      MI+GHEA G+V +VG++VK
Sbjct: 17  KPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERH---GMILGHEAVGVVEEVGSEVK 73

Query: 141 HLKATRPGGCLVIVGAGSQD 160
             K     G  VIV A + D
Sbjct: 74  DFKP----GDRVIVPAITPD 89

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 53.7 bits (130), Expect = 6e-08
 Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 4/77 (5%)

Query: 68  ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE 127
           +  +   L   +          EVL+ +  VGICGSD+H         F  S P I+GHE
Sbjct: 5   VCEKPGRLEVVDIPEPVPGAG-EVLVRVKRVGICGSDLHIYHGRN--PF-ASYPRILGHE 60

Query: 128 ASGIVSKVGAKVKHLKA 144
            SG V +VG  V  LK 
Sbjct: 61  LSGEVVEVGEGVAGLKV 77

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 53.4 bits (129), Expect = 8e-08
 Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 18/124 (14%)

Query: 280 AADFCHKLPDHVSLEEGALLEPLSVGVHAC-------RRAGVTLGSKVLITG-AGPIGLV 331
            AD    LPD VS E+GA     ++G+ A         RAG   G  VL+ G +G +G  
Sbjct: 106 PADQLVPLPDGVSFEQGA-----ALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHA 160

Query: 332 TLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391
            +  AR  GA RV+ T       +  ++ GADA      N+  E+++  I+    G+  D
Sbjct: 161 AVQLARWAGA-RVIATASSAEGAELVRQAGADAVF----NYRAEDLADRILAATAGQGVD 215

Query: 392 KTID 395
             I+
Sbjct: 216 VIIE 219

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 53.3 bits (129), Expect = 1e-07
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 5/61 (8%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           IEDP D   ++ +    ICGSD+H L HG I   +     I+GHE  G+V +VG +V++L
Sbjct: 22  IEDPTD--AIVRVTATAICGSDLH-LYHGYIPGMK--KGDILGHEFMGVVEEVGPEVRNL 76

Query: 143 K 143
           K
Sbjct: 77  K 77

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           E+ P   P   +VL+ +   G+CGSD+     G+      ++P   GHE  G V  +G  
Sbjct: 10  EEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPG 69

Query: 139 VKHLKATRPGG-CLVIVGAG 157
           V+ L     G     + G  
Sbjct: 70  VRGL---AVGDRVAGLSGGA 86

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 22/156 (14%)

Query: 223 AGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQ--IFFCATPPDHGNLSRYYRHA 280
            G+ +K +   DRV +   V   TC  C  G   LCR   I    +   +G  + Y    
Sbjct: 69  VGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVS---NGGYAEYIVVP 125

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVGV----HACRRAGVTLGSKVLITGA-GPIGLVTLLT 335
                K+PD +S E  A    L V      HA + AG+  G  V++ GA G  G+  +  
Sbjct: 126 EKNLFKIPDSISDELAA---SLPVAALTAYHALKTAGLGPGETVVVFGASGNTGIFAVQL 182

Query: 336 ARALGASRVVIT--DILEHKLKTAKEMGADATVLID 369
           A+ +GA  + ++  D L       KE GAD  V  D
Sbjct: 183 AKMMGAEVIAVSRKDWL-------KEFGADEVVDYD 211

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 52.6 bits (126), Expect = 1e-07
 Identities = 48/141 (34%), Positives = 63/141 (44%), Gaps = 12/141 (8%)

Query: 235 RVAIEPGV-PCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           +  I P V PC  C  CK GR  +CR           G  S     A   C  + D   L
Sbjct: 78  KAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLC--VVDEARL 135

Query: 294 EEGAL-LEPLSV-------GVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
               L LE +SV          A  +AG+  G  V++ GAG +G   + TA+A+GA+ VV
Sbjct: 136 AAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VV 194

Query: 346 ITDILEHKLKTAKEMGADATV 366
             DI   KL+  K  GAD T+
Sbjct: 195 AIDIDPEKLEMMKGFGADLTL 215

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD----PMIVGHEASGIVSK 134
           E  P+ +    E+L+ +   GICGSD+H     + G          P+++GHE SG+V K
Sbjct: 42  EDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEK 101

Query: 135 VGAKVKHLKATRP 147
            G  VK+ +   P
Sbjct: 102 TGKNVKNFEKGDP 114

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)

Query: 82  PIEDPDDHEVLLEMHCVGICGSDVHYLTH--GQIGDFRLSDPMIVGHEASGIVSKVGAKV 139
           P+ +P   +VL+ +   G+C SD+H +    G I  ++L  P  +GHE +G V +VG+ V
Sbjct: 19  PVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKL--PFTLGHENAGWVEEVGSGV 76

Query: 140 KHLK 143
             LK
Sbjct: 77  DGLK 80

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
            + P  +P   EVL+ +   G+   DV  +  G     R   P I G EA+G+V  VG+ 
Sbjct: 18  VEVPEPEPGPGEVLVRVKAAGVNPIDV-LVRQGLAPPVR-PLPFIPGSEAAGVVVAVGSG 75

Query: 139 VKHLKA 144
           V   K 
Sbjct: 76  VTGFKV 81

Length = 326

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 48/186 (25%), Positives = 65/186 (34%), Gaps = 28/186 (15%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIF---FCATPPDHGNLSRYYRHAADFCH----- 285
            RV     VPC  C  C+ G    C  +      A          Y  H    CH     
Sbjct: 30  QRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEH----CHLPAGT 85

Query: 286 ---KLPDHVSLEEGALLEPLSVGV----HACRRAGVTLGSKVLITGAGPIGLVTLLTARA 338
               +PD +     A+  P          A   AG   G +VL+ GAG +GL     A A
Sbjct: 86  AIVPVPDDLP---DAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAA 142

Query: 339 LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
            GA+RVV  D    + + A   G  AT L +     E        L  G   D  ++ SG
Sbjct: 143 AGAARVVAADPSPDRRELALSFG--ATALAEPEVLAERQGG----LQNGRGVDVALEFSG 196

Query: 399 IESTIK 404
             + ++
Sbjct: 197 ATAAVR 202

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)

Query: 142 LKATRPGGCLVIVGA-GSQDVKIPLVLTMTKEIDIR-GVFRYANDYPIALAMVASGKVDV 199
           +K  RPGG +  VG  G  D    L     K +  + G+       P  L ++  GK+D 
Sbjct: 254 VKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDP 313

Query: 200 KKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233
            KLITH + L+D L A+          IKV+I  
Sbjct: 314 SKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 51.7 bits (125), Expect = 3e-07
 Identities = 22/65 (33%), Positives = 36/65 (55%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
              P+ +P  ++VL+++    ICG+DVH     +     +  PM+VGHE  G V +VG++
Sbjct: 16  TDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSE 75

Query: 139 VKHLK 143
           V   K
Sbjct: 76  VTGFK 80

Length = 341

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF-RLSDPMIVGHEASGIVSKVGA 137
           E+ P  +P   EVL+++   G+C  D+ +      G F R   P+I+GHE  G V +VG 
Sbjct: 16  EEVPDPEPGPGEVLIKVKAAGVCYRDLLFWK----GFFPRGKYPLILGHEIVGTVEEVGE 71

Query: 138 KVKHLKATRPGGCLVIVGAGS 158
            V+  K          +  G 
Sbjct: 72  GVERFKPGDRVILYYYIPCGK 92

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 51.0 bits (123), Expect = 4e-07
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+C +D+H +  G     +L  P+I GHE  G V +VG  V  LKV
Sbjct: 35 VEACGVCHTDLH-VAKGDWPVPKL--PLIPGHEIVGTVVEVGEGVTGLKV 81

Length = 339

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 51.5 bits (124), Expect = 4e-07
 Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 5/62 (8%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGAKVKH 141
           ++DP   EVL+++   G+C SD H +T    GD  +   P++ GHE +G+V+KVG  V  
Sbjct: 21  LDDPKAGEVLVKLVASGLCHSDEHLVT----GDLPMPRYPILGGHEGAGVVTKVGPGVTG 76

Query: 142 LK 143
           +K
Sbjct: 77  VK 78

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 51.2 bits (123), Expect = 4e-07
 Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 22/134 (16%)

Query: 244 CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLS 303
           C  C YC  GR  LCR +       D G ++      AD+  K+P+         L+P  
Sbjct: 90  CGHCEYCTTGRETLCRSVKNAGYTVD-GGMAEQCIVTADYAVKVPEG--------LDPAQ 140

Query: 304 VGVHACRRAGVTL-----------GSKVLITGAGPIGLVTLLTARALGASRVVITDILEH 352
                C  AGVT            G  + I GAG +G + L  A+ +  ++V+  DI + 
Sbjct: 141 ASSITC--AGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDD 198

Query: 353 KLKTAKEMGADATV 366
           KL  AKE+GAD T+
Sbjct: 199 KLALAKEVGADLTI 212

Length = 338

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 51.0 bits (123), Expect = 5e-07
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 3/45 (6%)

Query: 6  ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          ICGSD+H L HG I   +     I+GHE  G+V +VG +V++LKV
Sbjct: 37 ICGSDLH-LYHGYIPGMK--KGDILGHEFMGVVEEVGPEVRNLKV 78

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 50.6 bits (122), Expect = 6e-07
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSK 134
           LR  E  P+ +P   EVL+++   G+C +D+H +  G +   +L  P+I GHE  G V  
Sbjct: 17  LRLTE-VPVPEPGPGEVLIKVEACGVCRTDLH-IVEGDLPPPKL--PLIPGHEIVGRVEA 72

Query: 135 VGAKVKHLK 143
           VG  V    
Sbjct: 73  VGPGVTRFS 81

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 50.6 bits (122), Expect = 6e-07
 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 23/93 (24%)

Query: 286 KLPDHVSLEEGALLEPLSVGVHACRRAGVT----L--------GSKVLITGAGPIGLVTL 333
           + PDH+S EE A L         C  AG+T    L        G  VL+ G G + L  L
Sbjct: 128 RAPDHLSFEEAATL--------PC--AGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFAL 177

Query: 334 LTARALGASRVVITDILEHKLKTAKEMGADATV 366
             A+A GA RV+ T   + KL+ AK +GAD  +
Sbjct: 178 QFAKAAGA-RVIATSSSDEKLERAKALGADHVI 209

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 50.6 bits (121), Expect = 6e-07
 Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 4/97 (4%)

Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVL 367
           A    GV  G  V + G G +G   +  A   GAS+++  DI + KL+ A+E GA  TV 
Sbjct: 168 AVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTV- 226

Query: 368 IDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404
              N S  +    I  L  G   D  ID  G   T K
Sbjct: 227 ---NSSGTDPVEAIRALTGGFGADVVIDAVGRPETYK 260

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 50.6 bits (121), Expect = 6e-07
 Identities = 49/177 (27%), Positives = 71/177 (40%), Gaps = 25/177 (14%)

Query: 244 CRTCTYCKEGRYNLCRQI---------------FFCATPPDH-----GNLSRYYRHAADF 283
           C  C +C  G+ NLC  +               F     P +        S Y       
Sbjct: 91  CGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEIS 150

Query: 284 CHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
             K+     LEE  LL   ++ G+ A    A V  G  V + G G IGL  +  AR   A
Sbjct: 151 LAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKA 210

Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
           SR++  DI   K + AK++G  AT  ++ N   + I   I+E+  G   D + +C G
Sbjct: 211 SRIIAIDINPAKFELAKKLG--ATDCVNPNDYDKPIQEVIVEITDG-GVDYSFECIG 264

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 50.4 bits (121), Expect = 7e-07
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 143 KATRPGGCLVIVG-AGSQDVKIPLVLTMTKEID-IRGVFR----YANDYPIALAMVASGK 196
           +     G LVI G        +P      K ID I  V R           A+ ++A G+
Sbjct: 217 ELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGR 276

Query: 197 VDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231
           +D+  L+TH + LE+   AFE A+      IK +I
Sbjct: 277 LDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 50.4 bits (121), Expect = 8e-07
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 18/87 (20%)

Query: 86  PDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKAT 145
           P  +EV ++M    +C +D+  +   +   F    P+I+GHE +GIV  VG  V +LK  
Sbjct: 25  PKANEVRIKMLATSVCHTDILAIEGFKATLF----PVILGHEGAGIVESVGEGVTNLK-- 78

Query: 146 RPGGCLVIVGAGSQDVKIPLVLTMTKE 172
            PG           D  IPL +    E
Sbjct: 79  -PG-----------DKVIPLFIGQCGE 93

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   GICG+DV  +  G      L  P I+GHE +G + +VG  V   KV
Sbjct: 31 VRACGICGTDVKKIRGGH---TDLKPPRILGHEIAGEIVEVGDGVTGFKV 77

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 146 RPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITH 205
            PGG +  VG   + V + L     K I I       N  P+ L +V+SGK+D  KL+TH
Sbjct: 257 APGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKLVTH 316

Query: 206 NYLLEDTLHAFETAKTGAGN-AIKVMI 231
            + L +   A++T    A + A+KV+I
Sbjct: 317 RFKLSEIEKAYDTFSAAAKHKALKVII 343

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 10/72 (13%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           IE P D   ++ +    ICGSD+H +  G+ G       +++GHEA G V +VG+ V+ L
Sbjct: 22  IEHPTD--AIVRITTTAICGSDLH-MYRGRTGA---EPGLVLGHEAMGEVEEVGSAVESL 75

Query: 143 KATRPGGCLVIV 154
           K     G  V+V
Sbjct: 76  KV----GDRVVV 83

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           +  P   EV +++   G+C +D+H +     G      P+I+GHE +GIV  +G  V  L
Sbjct: 20  VAPPKAGEVRIKVVATGVCHTDLHVID----GKLPTPLPVILGHEGAGIVESIGPGVTTL 75

Query: 143 KA 144
           K 
Sbjct: 76  KP 77

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 49.7 bits (120), Expect = 1e-06
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 8/121 (6%)

Query: 281 ADFCHKLPDHVSLEEGA-LLEPLSVGVHA-CRRAGVTLGSKVLIT-GAGPIGLVTLLTAR 337
           A     +P+ +SL E A L E          +  G+  G  VLI  GA  +G   +  A+
Sbjct: 102 AGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAK 161

Query: 338 ALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS 397
           ALGA RV+ T   E KL+  + +GAD  +    N+  E+ +  + E   G   D  +D  
Sbjct: 162 ALGA-RVIATAGSEEKLEACRALGADVAI----NYRTEDFAEEVKEATGGRGVDVILDMV 216

Query: 398 G 398
           G
Sbjct: 217 G 217

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 82  PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH 141
           P  +P   EVL+++H  G+   D+          F L+ P+I GH+ +G+V  VG  V  
Sbjct: 21  PTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80

Query: 142 LK 143
            K
Sbjct: 81  FK 82

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 71  RRFSLRFRE----QKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH 126
            +           + P  +P   EVL+++   GICGSD+H              P+++GH
Sbjct: 5   VKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPV---ETPVVLGH 61

Query: 127 EASGIVSKVGAKVKHLK 143
           E SG + +VG  V+  K
Sbjct: 62  EFSGTIVEVGPDVEGWK 78

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 170 TKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV 229
            KE+D+ G       YPIA+ ++ASG++    ++TH + LED   AFE    G  ++IKV
Sbjct: 290 RKELDVLGSHLGPYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGD-DSIKV 348

Query: 230 MI 231
           ++
Sbjct: 349 VL 350

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVK 200
            KA +PGG +V+VG G   + + L   + +E+ I G F     D P  L ++A GK+D +
Sbjct: 250 QKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ 309

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           E+ P+  P + E+L+ +   G+C SD+H L     G+     P ++GHE SG V +VG  
Sbjct: 16  EEIPVPRPKEGEILIRVAACGVCHSDLHVLK----GELPFPPPFVLGHEISGEVVEVGPN 71

Query: 139 VKHLKATRPG 148
           V++      G
Sbjct: 72  VENPYGLSVG 81

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)

Query: 1   MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQ--TRFVP 58
           +   GIC SD H ++    G      P+I+GHEA+GIV  VG  V  +K  ++    FVP
Sbjct: 39  IVATGICRSDDHVVS----GKLVTPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVP 94

Query: 59  EFR--NVCLSP 67
           +      CL+P
Sbjct: 95  QCGKCRACLNP 105

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 48.5 bits (116), Expect = 3e-06
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          G+CGSD+HY  HG          +I GHE +G+V  VG  V H +V
Sbjct: 35 GLCGSDLHYYYHGHRAP--AYQGVIPGHEPAGVVVAVGPGVTHFRV 78

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
            + P+ D +   VL+ +   G+CGSDVH    G+    R+  P+I+GHE  G V  +G  
Sbjct: 16  REVPLPDLEPGAVLVRVRLAGVCGSDVH-TVAGRRP--RVPLPIILGHEGVGRVVALGGG 72

Query: 139 VK 140
           V 
Sbjct: 73  VT 74

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 48.5 bits (116), Expect = 3e-06
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 4/93 (4%)

Query: 142 LKATRPGGCLVIVGA-GSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDV 199
           ++   PGG +V+VG     D   P  L + KE+ ++    Y   ++  AL  +A GKVDV
Sbjct: 251 IEGAPPGGRIVVVGVCMESDNIEPA-LAIRKELTLQFSLGYTPEEFADALDALAEGKVDV 309

Query: 200 KKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
             ++T    L+    AFE  +    +  K+++ 
Sbjct: 310 APMVTGTVGLDGVPDAFEALRDPEHH-CKILVD 341

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 48.6 bits (117), Expect = 3e-06
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   GIC +D+      + G      P ++GHE +G+V  VG+ V  LK 
Sbjct: 34 IVATGICHTDLV----VRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKP 79

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 4/60 (6%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           + DP   EV++++   G+C +D+HY   G   +F    P ++GHEA+G+V  VG  V  +
Sbjct: 21  VPDPGPGEVIVDIQACGVCHTDLHYREGGINDEF----PFLLGHEAAGVVEAVGEGVTDV 76

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 48.3 bits (116), Expect = 4e-06
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 8/55 (14%)

Query: 4  VGICGSDVHYLTHGQI-----GDFRLSD---PMIVGHEASGIVSKVGAKVKHLKV 50
           GICGSD+H    G I     G   L+    P+ +GHE SG+V +VG+ V   KV
Sbjct: 34 CGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKV 88

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 48.0 bits (115), Expect = 4e-06
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 80  QKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKV 139
           ++ +  P   EVL+++   G+C SD         G   LS P + GHE  G +  VG  V
Sbjct: 17  ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGV 73

Query: 140 KHLK 143
              K
Sbjct: 74  SRWK 77

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 47.9 bits (115), Expect = 5e-06
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 142 LKATRPGGCLVIVGA-GSQDVKIPLVLTMTKEIDIRG----VFRYANDYPIALAMVASGK 196
           ++A R GG + I+G  G    K P+   M K + +R     V RY    P  L ++ SG+
Sbjct: 293 IQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTHVQRY---LPRLLELIESGE 349

Query: 197 VDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV 229
           +D   +ITH   LED   A++         IKV
Sbjct: 350 LDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKV 382

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 47.6 bits (114), Expect = 5e-06
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           I+DP D   ++++    ICGSD+H    G I     +   ++GHE  G V +VG +V+ L
Sbjct: 22  IQDPTD--AIVKVTAAAICGSDLHIY-RGHIP---STPGFVLGHEFVGEVVEVGPEVRTL 75

Query: 143 K 143
           K
Sbjct: 76  K 76

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 48.1 bits (115), Expect = 5e-06
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 86  PDDHEVLLEMHCVGICGSDVHYLTH-GQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA 144
           P   EV +++    +C +DV++    GQ   F    P I+GHEA+GIV  VG  V  LK 
Sbjct: 25  PQAMEVRIKILHTSLCHTDVYFWEAKGQTPLF----PRILGHEAAGIVESVGEGVTDLKP 80

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 47.6 bits (114), Expect = 6e-06
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)

Query: 4  VGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          V  C SDVH +  G  G+      MI+GHEA G+V +VG++VK  K 
Sbjct: 34 VAPCTSDVHTVWGGAPGERH---GMILGHEAVGVVEEVGSEVKDFKP 77

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 47.2 bits (113), Expect = 7e-06
 Identities = 24/47 (51%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 4  VGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          VGICGSD+H         F  S P I+GHE SG V +VG  V  LKV
Sbjct: 34 VGICGSDLHIYHGRN--PF-ASYPRILGHELSGEVVEVGEGVAGLKV 77

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 47.6 bits (114), Expect = 7e-06
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 4/46 (8%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
           ICGSD+H +  G+ G       +++GHEA G V +VG+ V+ LKV
Sbjct: 36 AICGSDLH-MYRGRTGA---EPGLVLGHEAMGEVEEVGSAVESLKV 77

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 47.3 bits (113), Expect = 8e-06
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 10/81 (12%)

Query: 83  IEDP---DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKV 139
           + DP     H+ ++ +    ICGSD+H +  G +        MI+GHE  G V +VG+ V
Sbjct: 17  VPDPKIQGPHDAIVRVTATSICGSDLH-IYRGGV--PGAKHGMILGHEFVGEVVEVGSDV 73

Query: 140 KHLKATRPGGCLVIVGAGSQD 160
           K LK     G  V V   +  
Sbjct: 74  KRLKP----GDRVSVPCITFC 90

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 46.8 bits (112), Expect = 1e-05
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSD--PMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+C +D+H       GD+ +    P+I GHE +G+V  VG  V  LKV
Sbjct: 33 LEASGVCHTDLHAAL----GDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 46.8 bits (112), Expect = 1e-05
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 6/60 (10%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC 64
          G+C +D H L+    GD     P ++GHE +GIV  VG  V  +K  +    +  F   C
Sbjct: 38 GVCHTDAHTLS----GDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPGD--HVILLFTPEC 91

Length = 366

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 19/47 (40%), Positives = 26/47 (55%)

Query: 4  VGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
            ICG+DVH     +    R+  P+I GHE +G V +VG  V  +KV
Sbjct: 35 ASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKV 81

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 18/45 (40%), Positives = 26/45 (57%)

Query: 6  ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          ICG+DVH     +    R+  P +VGHE +G V  +G  V+ +KV
Sbjct: 35 ICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKV 79

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)

Query: 146 RPGGCLVIVGAGSQDVKIPLVLT--MTKEIDIRGVF--RYANDYPIALAMVASGKVDVKK 201
           R GG  V+VG         + +T  + + I I G +  R   D P  + + ASGK+D + 
Sbjct: 278 RDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEA 337

Query: 202 LITHNYLLEDTLHAFETAKTG 222
           L+TH Y LE+   A+E  + G
Sbjct: 338 LVTHKYKLEEINEAYENLRKG 358

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 4/54 (7%)

Query: 90  EVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 143
           E L++M   G+C +D+H       GDF      I+GHE  GIV +VG  V  LK
Sbjct: 27  EALVKMEYCGVCHTDLHVAN----GDFGDKTGRILGHEGIGIVKEVGPGVTSLK 76

Length = 338

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 46.0 bits (110), Expect = 2e-05
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 82  PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH 141
           P+  P   EVL+++  V +   D  +  +G    F  S P I+G + +G V +VG+ V  
Sbjct: 20  PVPKPGPDEVLVKVKAVALNPVDWKHQDYG----FIPSYPAILGCDFAGTVVEVGSGVTR 75

Query: 142 LK 143
            K
Sbjct: 76  FK 77

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 13/162 (8%)

Query: 214 HAFETAKTGAGNAIKVMIHCDRVAIEPGV---PCRTCTYCKEGRYNLCRQIFFCATPPDH 270
           H      T  G  +K     DRV +  GV    C++C  C +   N C ++ F      H
Sbjct: 72  HEIVGIVTKLGKNVKKFKEGDRVGV--GVIVGSCKSCESCDQDLENYCPKMIFTYNSIGH 129

Query: 271 GNLSRYYRHA------ADFCHKLPDHVSLEEGALLEPLSVGVHA-CRRAGVTLGSKVL-I 322
                Y  ++        F  + PD++ L+ GA L    + V++  +  G+T   K L +
Sbjct: 130 DGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGV 189

Query: 323 TGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADA 364
            G G +G V +   +A G    VI+     + +    +GAD+
Sbjct: 190 AGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADS 231

Length = 360

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 46.0 bits (110), Expect = 2e-05
 Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 11/113 (9%)

Query: 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHA----CRRAGVTLGSKVLI-TG 324
            G+L+ Y    A      P ++S+ E A L PL VG+ A      RA V  G  VLI  G
Sbjct: 96  QGSLAEYAVVDARLLALKPANLSMREAAAL-PL-VGITAWEGLVDRAAVQAGQTVLIHGG 153

Query: 325 AGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEI 377
           AG +G V +  A+A GA   V       K   A+ +GAD    I    ++ E 
Sbjct: 154 AGGVGHVAVQLAKAAGAR--VYATASSEKAAFARSLGADPI--IYYRETVVEY 202

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 5/109 (4%)

Query: 293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
           L++ +LL   +S GV A    A V  GS V I G G +GL     ARA GAS+++  DI 
Sbjct: 173 LKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDIN 232

Query: 351 EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGI 399
             K +  KEMG   T  I+   S + +   I E+  G   D + +C+G 
Sbjct: 233 PEKFEKGKEMG--ITDFINPKDSDKPVHERIREMTGG-GVDYSFECAGN 278

Length = 381

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 45.3 bits (107), Expect = 3e-05
 Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 2/105 (1%)

Query: 244 CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGA-LLEPL 302
           C  C YC+ G  NLC    +     D G  + Y    A F ++LP      E A LL   
Sbjct: 93  CGVCRYCRRGAENLCPASRYTGWDTD-GGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAG 151

Query: 303 SVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT 347
            +G  A  RA +  G ++ + G G    +T   A A GA+  V+T
Sbjct: 152 IIGYRALLRASLPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMT 196

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 44.9 bits (107), Expect = 4e-05
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)

Query: 4  VGICGSDVHYLTH--GQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
           G+C SD+H +    G I  ++L  P  +GHE +G V +VG+ V  LK 
Sbjct: 35 AGVCHSDLHVIDGVWGGILPYKL--PFTLGHENAGWVEEVGSGVDGLKE 81

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 44.2 bits (105), Expect = 7e-05
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 5  GICGSDVHYLTHGQIGDF-RLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          G+C  D+ +      G F R   P+I+GHE  G V +VG  V+  K 
Sbjct: 36 GVCYRDLLFWK----GFFPRGKYPLILGHEIVGTVEEVGEGVERFKP 78

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 44.2 bits (105), Expect = 7e-05
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          G+C +D+H    G  G      P++ GHE  G V +VGA V+  KV
Sbjct: 35 GVCHTDLH-AAEGDWGG--SKYPLVPGHEIVGEVVEVGAGVEGRKV 77

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 44.0 bits (104), Expect = 8e-05
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 12/69 (17%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR--- 61
          G+C +D+H +     G      P+I+GHE +GIV  +G  V  LK  ++   +P F    
Sbjct: 36 GVCHTDLHVID----GKLPTPLPVILGHEGAGIVESIGPGVTTLKPGDKV--IPLFGPQC 89

Query: 62 ---NVCLSP 67
               CL+P
Sbjct: 90 GKCKQCLNP 98

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 43.8 bits (104), Expect = 9e-05
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 6  ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          ICGSD+H +  G +        MI+GHE  G V +VG+ VK LK 
Sbjct: 37 ICGSDLH-IYRGGV--PGAKHGMILGHEFVGEVVEVGSDVKRLKP 78

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 43.7 bits (104), Expect = 9e-05
 Identities = 19/46 (41%), Positives = 26/46 (56%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
           ICG+DVH     +     +  PM+VGHE  G V +VG++V   KV
Sbjct: 36 AICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKV 81

Length = 341

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 6/60 (10%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           I+  DD  VL+++   G+CGSD+  +       +    P+ +GHE SG V  VG+ V  L
Sbjct: 22  IKHQDD--VLVKVASSGLCGSDIPRIFKNGAHYY----PITLGHEFSGYVEAVGSGVDDL 75

Length = 347

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 10/110 (9%)

Query: 127 EASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPL--VLTMTKEIDIRGVFRY-AN 183
           EASG  + V   ++ L   R GG  V+VG+ +    +PL     + K + I GV  Y  +
Sbjct: 255 EASGHPAAVPEGLELL---RRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPS 311

Query: 184 DYPIALAMVA--SGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231
               A+  +     +    +L+TH Y LED   A E A+  +G A+KV+I
Sbjct: 312 HLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAE--SGTALKVVI 359

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 43.7 bits (104), Expect = 1e-04
 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 9/104 (8%)

Query: 127 EASGIVSKVGAKVKHLKATRPGGCLVIVGAG--SQDVKIPLVLTMTKEIDIRGVF----R 180
           EA G  + +      L  TR GG  V+VG G   + V +P +     E  ++G       
Sbjct: 257 EAVGRAATIRQA---LAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSAN 313

Query: 181 YANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG 224
              D P  L +  +G++ + +L+T  Y L++   AF     G  
Sbjct: 314 PRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGEN 357

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 43.7 bits (104), Expect = 1e-04
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 7/96 (7%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTM-TKEIDIRGVF----RYANDYPIALAMVASGK 196
           L+AT  GG  VI+G      +I             +G      R  +D P  + +  +GK
Sbjct: 272 LEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGK 331

Query: 197 VDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
           + + +L+TH   LED   AF+      G +I+ +I 
Sbjct: 332 LPLDRLVTHTIPLEDINEAFDLMH--EGKSIRSVIR 365

Length = 366

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSK 134
               E  P  +P   E L+ +   GIC +D+        G +    P + GHE  GIV +
Sbjct: 11  DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYK----GYYPF--PGVPGHEFVGIVEE 64

Query: 135 VG 136
             
Sbjct: 65  GP 66

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 6/60 (10%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC 64
          G+C +D+HY   G   +F    P ++GHEA+G+V  VG  V  +   +    V  +R VC
Sbjct: 37 GVCHTDLHYREGGINDEF----PFLLGHEAAGVVEAVGEGVTDVAPGD--YVVLNWRAVC 90

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 4  VGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
           GICGSD+H              P+++GHE SG + +VG  V+  KV
Sbjct: 36 AGICGSDLHIYKGDYDPV---ETPVVLGHEFSGTIVEVGPDVEGWKV 79

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 21/102 (20%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPI-----------ALA 190
           LKA  PGG + I+G     V I L       +    +F+      I             A
Sbjct: 249 LKALTPGGRVSILGLPPGPVDIDL----NNLV----IFKGLTVQGITGRKMFETWYQVSA 300

Query: 191 MVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
           ++ SGKVD+  +ITH   LED   AFE  +  +G   KV+++
Sbjct: 301 LLKSGKVDLSPVITHKLPLEDFEEAFELMR--SGKCGKVVLY 340

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 7/92 (7%)

Query: 124 VGHEASGIVSKVGAKVKHLKATRPGGCLVIVG---AGSQDVKIPLVLTMTKEIDIRGVFR 180
           V  +A GI       V  L   R  G  V VG        V +P+   + +E++I G   
Sbjct: 236 VSVDALGIPETCRNSVASL---RKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG 292

Query: 181 Y-ANDYPIALAMVASGKVDVKKLITHNYLLED 211
             A+ Y   LA++ASGK+D + L+     L++
Sbjct: 293 MPAHRYDAMLALIASGKLDPEPLVGRTISLDE 324

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 142 LKATRPGGCLVIVGA-GSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVAS 194
           L+  RPGG +V+VG  G   V  PL   + KE+ I G       ++  AL ++AS
Sbjct: 77  LELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGGGREEFEEALELLAS 131

Length = 131

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 8/71 (11%)

Query: 1   MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVP 58
           M    +C +D+  +   +   F    P+I+GHE +GIV  VG  V +LK  ++    F+ 
Sbjct: 34  MLATSVCHTDILAIEGFKATLF----PVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIG 89

Query: 59  EFR--NVCLSP 67
           +    + C S 
Sbjct: 90  QCGECSNCRSG 100

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 13/92 (14%)

Query: 142 LKATRPGGCLVIVGAGSQDV-KIPLVLTMTKEIDIRGVF--RYANDYPIALA-------- 190
           L++   GG L+++G  S ++ +IP  L + K I + GV+   YA   P  L         
Sbjct: 225 LRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFD 284

Query: 191 MVASGKVDVKKLITHNYLLEDTLHAFETAKTG 222
           ++A GK  ++  ++  + LE    A       
Sbjct: 285 LLAEGK--IRPHVSAVFPLEQAAEALRALADR 314

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 41/141 (29%), Positives = 54/141 (38%), Gaps = 22/141 (15%)

Query: 244 CRTCTYCKEGRYNLCRQI---------------FFCATPPDH-----GNLSRYYRHAADF 283
           C  C  C     NLC +                F C   P H        S Y       
Sbjct: 96  CGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIA 155

Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
             K+     LE+  L+    S G   A   A VT GS   + G G +GL  ++  +A GA
Sbjct: 156 VAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGA 215

Query: 342 SRVVITDILEHKLKTAKEMGA 362
           SR++  DI + K   AKE+GA
Sbjct: 216 SRIIAVDINKDKFAKAKELGA 236

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 13/80 (16%)

Query: 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHAC-------RRAGVTLGSKVLI 322
            G  + + R  A    K+PD +S EE A     ++ V            A +  G  VLI
Sbjct: 60  PGAFATHVRVDARLVVKIPDSLSFEEAA-----TLPVAYLTAYYALVDLARLQKGESVLI 114

Query: 323 T-GAGPIGLVTLLTARALGA 341
              AG +G   +  A+ LGA
Sbjct: 115 HAAAGGVGQAAIQLAQHLGA 134

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 71  RRFSLRFREQKPIED-----PDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVG 125
            R S  FRE   I D     P   EVL++   VGI  SD+++ T G+     +  P   G
Sbjct: 8   HRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINF-TAGRYDPG-VKPPFDCG 65

Query: 126 HEASGIVSKVGAKVKHLKA 144
            E  G V  VG  V   K 
Sbjct: 66  FEGVGEVVAVGEGVTDFKV 84

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 4   VGICGSDVHYLTHGQIGDFRLSD----PMIVGHEASGIVSKVGAKVKHLKV 50
            GICGSD+H     + G          P+++GHE SG+V K G  VK+ + 
Sbjct: 61  CGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEK 111

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)

Query: 77  FREQKPIE-------DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEAS 129
           + + +P+         P   EVL+++   G+C SD+  +     GD     PM +GHEA+
Sbjct: 15  YADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVIN----GDRPRPLPMALGHEAA 70

Query: 130 GIVSKVGAKVKHLKA 144
           G+V +VG  V  L+ 
Sbjct: 71  GVVVEVGEGVTDLEV 85

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 16/46 (34%), Positives = 23/46 (50%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          G+CGSD+     G+      ++P   GHE  G V  +G  V+ L V
Sbjct: 30 GVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAV 75

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          M   G+C +D+H       GDF      I+GHE  GIV +VG  V  LKV
Sbjct: 32 MEYCGVCHTDLHVAN----GDFGDKTGRILGHEGIGIVKEVGPGVTSLKV 77

Length = 338

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 42.0 bits (100), Expect = 3e-04
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 11/93 (11%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSK 134
           L + +  P+ +P   EVL+    +G+   D ++ +    G + L  P ++G E +G+V  
Sbjct: 14  LEYEDV-PVPEPGPGEVLVRNTAIGVNFIDTYFRS----GLYPLPLPFVLGVEGAGVVEA 68

Query: 135 VGAKVKHLKATRPG---GCLVIVGAGSQDVKIP 164
           VG  V   K    G         GA ++   +P
Sbjct: 69  VGPGVTGFK---VGDRVAYAGPPGAYAEYRVVP 98

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 14/110 (12%)

Query: 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRR------AGVTLGSKVLIT 323
           +G+ +++    A      P H+S EE A    + VG  A R         V  G  VLI 
Sbjct: 143 YGSFAQFALVQATQLMPKPKHLSWEEAAA--YMLVGATAYRMLFGWNPNTVKPGDNVLIW 200

Query: 324 GA-GPIGLVTLLTARALGASRV-VITDILEHKLKTAKEMGADATVLIDRN 371
           GA G +G + +  ARA GA+ V V++   E K +  + +GA+   +I+R 
Sbjct: 201 GASGGLGSMAIQLARAAGANPVAVVSS--EEKAEYCRALGAEG--VINRR 246

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 41.9 bits (99), Expect = 4e-04
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+C SD H +T    GD  +   P++ GHE +G+V+KVG  V  +K 
Sbjct: 33 LVASGLCHSDEHLVT----GDLPMPRYPILGGHEGAGVVTKVGPGVTGVKP 79

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.8 bits (99), Expect = 4e-04
 Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 7/84 (8%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
            + PI  P   EVL+++H   +   D                P I G + +G V  VG+ 
Sbjct: 17  VEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSG 76

Query: 139 VKHLKATRPG----GCLVIVGAGS 158
           V   K    G    G L   G G+
Sbjct: 77  VTRFK---VGDEVFGRLPPKGGGA 97

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 85  DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA 144
           DP ++EV +E   +GI   D  Y+  G      L  P  +G EA+G+VSKVG+ VKH+K 
Sbjct: 25  DPAENEVQVENKAIGINYIDT-YIRSGLYPPPSL--PSGLGTEAAGVVSKVGSGVKHIKV 81

Length = 327

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 281 ADFCHKLPDHVSLEEGALLEP---LSVGVHACRRAGVTLGSKVLI-TGAGPIGLVTLLTA 336
           A     +P+ +SL E A L P    +V  +  +R G+  G  VLI  GA  IG   +  A
Sbjct: 102 AGQVLPVPEGLSLVEAAAL-PETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLA 160

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATV 366
           +A GA RV  T   + K    + +GAD  +
Sbjct: 161 KAFGA-RVFTTAGSDEKCAACEALGADIAI 189

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 36/109 (33%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 115 DFRLSDPM-IVGHEASGIVSKVGAKV--KHLKATRPGGCLVIVG--AGSQDVKIPLVLTM 169
           +   SD +  V   A  I+  VG       LKA R GG LV+VG   G     +P  L +
Sbjct: 216 NSSDSDALEAVKEIADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLI 275

Query: 170 TKEIDIRGVFRY-ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFE 217
            KEI I G       D   AL   A GK  +K  I     L++   A+E
Sbjct: 276 LKEISIVGSLVGTRADLEEALDFAAEGK--IKPEILETIPLDEINEAYE 322

Length = 339

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 2  HCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
             G+   DV  +  G     R   P I G EA+G+V  VG+ V   KV
Sbjct: 35 KAAGVNPIDV-LVRQGLAPPVR-PLPFIPGSEAAGVVVAVGSGVTGFKV 81

Length = 326

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 41.9 bits (99), Expect = 5e-04
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 2  HCVGICGSDVHYLTH-GQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 49
              +C +DV++    GQ   F    P I+GHEA+GIV  VG  V  LK
Sbjct: 35 LHTSLCHTDVYFWEAKGQTPLF----PRILGHEAAGIVESVGEGVTDLK 79

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 7/111 (6%)

Query: 260 QIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLS--VGVHACRRAG-VTL 316
           ++F    P   G L+ Y         K P+ VS EE A L P++    + A R AG V  
Sbjct: 85  EVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAAL-PVAGLTALQALRDAGKVKP 143

Query: 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV 366
           G +VLI GA G +G   +  A+ALGA  V          +  + +GAD  +
Sbjct: 144 GQRVLINGASGGVGTFAVQIAKALGA-HVTGVCS-TRNAELVRSLGADEVI 192

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 41.1 bits (97), Expect = 6e-04
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
           ICGSD+H    G I     +   ++GHE  G V +VG +V+ LKV
Sbjct: 36 AICGSDLHIY-RGHIP---STPGFVLGHEFVGEVVEVGPEVRTLKV 77

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 41.1 bits (97), Expect = 6e-04
 Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 26/178 (14%)

Query: 244 CRTCTYCKEGRYNLCR--QIFFCATPPDHGNLSRYYRHAADFCH---------------- 285
           C+ C +CK  + N+C   +I        +   SR+  +     H                
Sbjct: 92  CKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVG 151

Query: 286 ---KLPDHVSLEEGALLE-PLSVGVHACRR-AGVTLGSKVLITGAGPIGLVTLLTARALG 340
              K+     L++  LL   +S G+ A    A V  GS V I G G +GL     AR  G
Sbjct: 152 CVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRG 211

Query: 341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
           ASR++  D+   K + AK+ G   T  ++     + +   I E+  G   D + +C+G
Sbjct: 212 ASRIIGVDLNPSKFEQAKKFG--VTEFVNPKDHDKPVQEVIAEMTGG-GVDYSFECTG 266

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 40.9 bits (96), Expect = 7e-04
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%)

Query: 65  LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVH-YLTHGQIGDFRLSDPMI 123
            S ++ +  SL   E +PI  P   EV +++   GICGSD H Y  H     +    P +
Sbjct: 2   KSIVIEKPNSLAIEE-RPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKY----PRV 56

Query: 124 VGHEASGIVSKVGAKVKH 141
           +GHE  G++  VG  V  
Sbjct: 57  IGHEFFGVIDAVGEGVDA 74

Length = 339

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 40.8 bits (96), Expect = 8e-04
 Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 15/125 (12%)

Query: 280 AADFCHKLPDHVSLEEGALLEPLSVGVHAC---RRAGVTLGSKVLITGA-GPIGLVTLLT 335
             D  H +PD + LE    +  +  G  A      A +T G  VL+T A G +G  +LL 
Sbjct: 105 DVDSLHPVPDGLDLEAAVAV--VHDGRTALGLLDLATLTPGDVVLVTAAAGGLG--SLLV 160

Query: 336 --ARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT 393
             A+A GA  VV       K    + +GAD  V    +++  +    + E L G      
Sbjct: 161 QLAKAAGA-TVVGAAGGPAKTALVRALGADVAV----DYTRPDWPDQVREALGGGGVTVV 215

Query: 394 IDCSG 398
           +D  G
Sbjct: 216 LDGVG 220

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKK 201
           L+  RP G +V+    +      L   +  EI + G       +  AL ++  G VDV  
Sbjct: 232 LRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVG--SRCGPFAPALRLLRKGLVDVDP 289

Query: 202 LITHNYLLEDTLHAFETAKTGAGNAIKVMI 231
           LIT  Y LE+ L AFE A      A+KV++
Sbjct: 290 LITAVYPLEEALEAFERAAE--PGALKVLL 317

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 89  HEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 143
            EV +E+   G+   DV     G +      D   +G E SGIV++VG+ V  LK
Sbjct: 1   DEVEVEVKAAGLNFRDVLVAL-GLLPG----DETPLGLECSGIVTRVGSGVTGLK 50

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 40.5 bits (96), Expect = 0.001
 Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 12/123 (9%)

Query: 281 ADFCHKLPDHVSLEEGA--LLEPLSVGVHACRRAGVTLGSKVLITG-AGPIGLVTLLT-- 335
           A    KLPD +S E  A  LL+ L+          V  G  VL+   AG +GL  LLT  
Sbjct: 99  ASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGL--LLTQW 156

Query: 336 ARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID 395
           A+ALGA  V+ T   E K + A+  GAD  +    N+  E+    + E+  G   D   D
Sbjct: 157 AKALGA-TVIGTVSSEEKAELARAAGADHVI----NYRDEDFVERVREITGGRGVDVVYD 211

Query: 396 CSG 398
             G
Sbjct: 212 GVG 214

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 40.7 bits (96), Expect = 0.001
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
            +  + +P   EVL+++    I  SD+ +L  GQ      + P+  G E SG V   G  
Sbjct: 21  PEPEVPEPGPGEVLIKVEAAPINPSDLGFL-KGQY-GSTKALPVPPGFEGSGTVVAAGGG 78

Query: 139 VKH 141
              
Sbjct: 79  PLA 81

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 33/181 (18%)

Query: 244 CRTCTYCKEGRYNLCRQI------------------------FFCATPPDHGNLSRYYRH 279
           C +C +C  G+ N+C+ +                         +CA      + S Y   
Sbjct: 99  CGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAV----SSFSEYTVV 154

Query: 280 AADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTAR 337
            +    K+     L +  LL   ++ G+ A    A V+ GS V+I G G +GL     A+
Sbjct: 155 HSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAK 214

Query: 338 ALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS 397
             GAS+++  DI   K + AK  G   T  I+ N   E I   +I+ + G   D + +C 
Sbjct: 215 LRGASQIIGVDINPEKAEKAKTFG--VTDFINPNDLSEPIQ-QVIKRMTGGGADYSFECV 271

Query: 398 G 398
           G
Sbjct: 272 G 272

Length = 378

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLT-MTKEIDIRGVFRYAN-DYPIALAMV 192
           L+  RPGG +V+VG  S    +  +   + KE+ I G       D+  AL ++
Sbjct: 219 LRLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 8/71 (11%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTH--------GQIGDFRLSDPMIVGHEASG 130
              P  +P   +VL+++   GICGSD+H   H        G      L   +++GHE  G
Sbjct: 14  RDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCG 73

Query: 131 IVSKVGAKVKH 141
            V   G   + 
Sbjct: 74  EVVDYGPGTER 84

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 39.9 bits (94), Expect = 0.002
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF-RLSDPMIVGHEASGIVSKVG 136
              P  +P   EVL+    VG+CG+D   +  G+ G      D +++GHEA G+V +VG
Sbjct: 16  VDIPEPEPTPGEVLVRTLEVGVCGTD-REIVAGEYGTAPPGEDFLVLGHEALGVVEEVG 73

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 16/50 (32%), Positives = 24/50 (48%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +H  G+   D+          F L+ P+I GH+ +G+V  VG  V   KV
Sbjct: 34 VHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKV 83

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 85  DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGAKVKHLK 143
           +  D +V +++   G+C SD+H + +    ++  +  P++ GHE  GIV+K+G  VK  K
Sbjct: 34  ENGDEDVTVKILYCGVCHSDLHTIKN----EWGFTRYPIVPGHEIVGIVTKLGKNVKKFK 89

Query: 144 ATRPGGCLVIVGA 156
                G  VIVG+
Sbjct: 90  EGDRVGVGVIVGS 102

Length = 360

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 86  PDDHEVLLEMHCVGICGSDVHYLT----HGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH 141
             D E+L+ +    +C S          H ++ +    +P+I+GHE +G + KVG K + 
Sbjct: 24  IADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQG 83

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 14/109 (12%)

Query: 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACR----RAGVTL--GSKVLITG 324
           G+ + +           P H++ EE A   P   G  A R         +  G  VLI G
Sbjct: 140 GSFAEFALVKDYQLMPKPKHLTWEEAAC--PGLTGATAYRQLVGWNPAAVKPGDNVLIWG 197

Query: 325 A-GPIGLVTLLTARALGASRV-VITDILEHKLKTAKEMGADATVLIDRN 371
           A G +G      ARA G + V V++     K +  + +GA+A   IDRN
Sbjct: 198 AAGGLGSYATQLARAGGGNPVAVVSS--PEKAEYCRSLGAEAV--IDRN 242

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 13/79 (16%)

Query: 79  EQKP---IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDP-MIVGHEASGIVSK 134
           E +P   I++P D   +++M    ICG+D+H L     GD     P  I+GHE  G+V +
Sbjct: 15  EDRPKPTIQEPTD--AIVKMLKTTICGTDLHILK----GDVPTVTPGRILGHEGVGVVEE 68

Query: 135 VGAKVKHLKATRPGGCLVI 153
           VG+ V + K    G  ++I
Sbjct: 69  VGSAVTNFK---VGDRVLI 84

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 142 LKATRPGGCLVIVG-AGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDV 199
           L++   GG LV++G        +   L + KEI I G       D   AL +V  GK  +
Sbjct: 243 LRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGK--I 300

Query: 200 KKLITHNYLLEDTLHAFETAKTG 222
           K +I     LED   A E  K+G
Sbjct: 301 KPVIDRVVSLEDINEALEDLKSG 323

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 142 LKATRPG-GCLVIVGAGSQD----VKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGK 196
           L++T+ G G  V+VG             L+L  T +    G F+  +D P  ++   + K
Sbjct: 272 LESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKK 331

Query: 197 VDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231
            D+ +LITH    E+    F+  K+  G  I+ +I
Sbjct: 332 FDLDELITHVLPFEEINKGFDLMKS--GECIRTVI 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|214966 smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT, C-terminal domain

 Score = 37.9 bits (89), Expect = 0.003
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEI 377
           KV++ GAG +GL    TA+ LGA  V + D+   +L+  +  +GA  T L  +   LEE 
Sbjct: 22  KVVVIGAGVVGLGAAATAKGLGA-EVTVLDVRPARLRQLESLLGARFTTLYSQAELLEEA 80

Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Length = 149

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 38.7 bits (91), Expect = 0.004
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 13/67 (19%)

Query: 82  PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIV-----GHEASGIVSKVG 136
           P  +P    V++E+   G+C SD     HG  G     DP +      GHE +G+V +VG
Sbjct: 19  PDPEPPPDGVVVEVEACGVCRSD----WHGWQGH----DPDVTLPHVPGHEFAGVVVEVG 70

Query: 137 AKVKHLK 143
             V   +
Sbjct: 71  EDVSRWR 77

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 9/72 (12%)

Query: 86  PDDHEVLLEMHCVGICGSDVHYLTHGQI-GDFRLSD-PMIVGHEASGIVSKVGAKVKHLK 143
           P+D  V++++   GIC +D+H     QI  D  +S+ PM+ GHE  G V +VG+ V    
Sbjct: 34  PED--VVIKVIYCGICHTDLH-----QIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFT 86

Query: 144 ATRPGGCLVIVG 155
                G  VIVG
Sbjct: 87  VGDIVGVGVIVG 98

Length = 357

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	408
KOG0024|consensus	354		100.0
KOG0024|consensus	354		100.0
KOG0023|consensus	360		100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	99.97
KOG0022|consensus	375		99.97
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.96
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	99.96
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	99.95
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.95
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.95
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	99.95
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	99.94
PLN02586	360	probable cinnamyl alcohol dehydrogenase	99.94
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.94
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	99.94
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	99.94
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	99.94
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.94
PLN02178	375	cinnamyl-alcohol dehydrogenase	99.94
PLN02740	381	Alcohol dehydrogenase-like	99.93
PLN02740	381	Alcohol dehydrogenase-like	99.93
PLN02827	378	Alcohol dehydrogenase-like	99.93
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	99.93
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.93
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	99.93
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.93
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.93
KOG1202|consensus	2376		99.93
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.93
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	99.93
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.92
PLN02827	378	Alcohol dehydrogenase-like	99.92
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	99.92
PLN02514	357	cinnamyl-alcohol dehydrogenase	99.92
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	99.92
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.92
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	99.92
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	99.92
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.92
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.92
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.92
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.91
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.91
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.91
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.91
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.91
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.9
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	99.9
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	99.9
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.89
PLN02586	360	probable cinnamyl alcohol dehydrogenase	99.89
KOG1197|consensus	336		99.89
PLN02178	375	cinnamyl-alcohol dehydrogenase	99.89
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.89
PRK10083	339	putative oxidoreductase; Provisional	99.89
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.88
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	99.88
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	99.88
PRK10083	339	putative oxidoreductase; Provisional	99.88
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.88
PLN02702	364	L-idonate 5-dehydrogenase	99.88
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	99.88
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.87
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.87
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	99.86
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.86
KOG1197|consensus	336		99.86
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.86
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	99.86
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	99.85
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.85
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	99.85
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.85
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	99.85
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.85
PLN02702	364	L-idonate 5-dehydrogenase	99.85
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.84
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.84
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.84
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.84
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.84
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.84
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.84
PLN02514	357	cinnamyl-alcohol dehydrogenase	99.84
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.84
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.84
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.84
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	99.84
KOG0025|consensus	354		99.84
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.84
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.84
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.83
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.83
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.83
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.83
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.83
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.83
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.83
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.83
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.83
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	99.82
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.82
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.82
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.82
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	99.82
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.82
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.82
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.81
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	99.81
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	99.81
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.81
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.81
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.81
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.81
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.81
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	99.81
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.81
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.81
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.8
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.8
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.8
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.8
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.8
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.8
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.8
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.8
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	99.8
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.79
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.79
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.79
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.79
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.79
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.79
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.78
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.78
KOG1198|consensus	347		99.78
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.78
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.77
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.77
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	99.77
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.77
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.77
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.77
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.77
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.77
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.77
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.77
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.76
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.76
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.76
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.76
PTZ00354	334	alcohol dehydrogenase; Provisional	99.75
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.75
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.75
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	99.75
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.75
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	99.75
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.75
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.75
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.75
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.75
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.75
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.74
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	99.74
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.74
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.74
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.74
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.74
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.74
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.74
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.73
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.73
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.72
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.72
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.72
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.72
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.72
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.71
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.71
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	99.7
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	99.7
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.7
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.7
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.7
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	99.7
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	99.7
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.69
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.69
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.69
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.69
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.69
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.68
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.66
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.66
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.65
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.65
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	99.64
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.64
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.64
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.64
KOG0025|consensus	354		99.64
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.61
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.58
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.56
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.56
KOG1198|consensus	347		99.54
KOG0023|consensus	360		99.54
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	99.52
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.52
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.5
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.48
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.46
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.39
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.36
KOG0022|consensus	375		99.32
KOG1202|consensus	2376		99.21
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.2
KOG1196|consensus	343		99.14
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.03
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	98.93
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	98.87
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	98.81
KOG1196|consensus	343		98.75
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	98.65
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	98.64
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	98.55
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	98.55
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	98.49
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	98.48
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	98.48
PTZ00354	334	alcohol dehydrogenase; Provisional	98.47
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	98.46
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	98.4
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	98.39
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	98.38
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	98.36
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	98.34
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	98.31
cd08252	336	AL_MDR Arginate lyase and other MDR family members	98.26
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	98.25
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	98.2
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.2
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	98.18
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.17
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	98.13
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	98.11
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.07
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.06
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	98.02
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.98
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.97
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	97.97
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	97.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	97.96
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.95
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	97.95
PRK06139	330	short chain dehydrogenase; Provisional	97.93
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	97.92
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.88
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	97.84
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.82
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	97.82
PRK08339	263	short chain dehydrogenase; Provisional	97.81
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.79
PRK05872	296	short chain dehydrogenase; Provisional	97.77
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.77
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	97.75
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	97.75
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	97.7
PRK05993	277	short chain dehydrogenase; Provisional	97.69
PRK07814	263	short chain dehydrogenase; Provisional	97.68
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.68
PRK06500	249	short chain dehydrogenase; Provisional	97.68
PRK09072	263	short chain dehydrogenase; Provisional	97.68
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.67
PRK07478	254	short chain dehydrogenase; Provisional	97.67
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.67
PRK08324	681	short chain dehydrogenase; Validated	97.66
PRK08265	261	short chain dehydrogenase; Provisional	97.64
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.64
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.64
PRK06198	260	short chain dehydrogenase; Provisional	97.62
PRK08267	260	short chain dehydrogenase; Provisional	97.61
PRK07904	253	short chain dehydrogenase; Provisional	97.6
PRK07831	262	short chain dehydrogenase; Provisional	97.57
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	97.57
PRK07825	273	short chain dehydrogenase; Provisional	97.56
PRK07890	258	short chain dehydrogenase; Provisional	97.56
PRK07062	265	short chain dehydrogenase; Provisional	97.55
PRK05866	293	short chain dehydrogenase; Provisional	97.54
PRK05693	274	short chain dehydrogenase; Provisional	97.54
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.54
PRK07677	252	short chain dehydrogenase; Provisional	97.53
PRK05867	253	short chain dehydrogenase; Provisional	97.53
PRK08628	258	short chain dehydrogenase; Provisional	97.53
PRK07109	334	short chain dehydrogenase; Provisional	97.53
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.52
PRK07576	264	short chain dehydrogenase; Provisional	97.52
PRK06194	287	hypothetical protein; Provisional	97.52
PRK05876	275	short chain dehydrogenase; Provisional	97.52
PRK08177	225	short chain dehydrogenase; Provisional	97.51
PRK08862	227	short chain dehydrogenase; Provisional	97.5
PRK12939	250	short chain dehydrogenase; Provisional	97.5
PRK07063	260	short chain dehydrogenase; Provisional	97.5
PRK06182	273	short chain dehydrogenase; Validated	97.49
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.49
PRK12829	264	short chain dehydrogenase; Provisional	97.49
PRK06172	253	short chain dehydrogenase; Provisional	97.49
PRK05854	313	short chain dehydrogenase; Provisional	97.48
PRK06138	252	short chain dehydrogenase; Provisional	97.48
PRK06180	277	short chain dehydrogenase; Provisional	97.47
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	97.47
PRK06114	254	short chain dehydrogenase; Provisional	97.47
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.46
PRK08251	248	short chain dehydrogenase; Provisional	97.46
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.46
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.46
PRK06720	169	hypothetical protein; Provisional	97.46
PRK06841	255	short chain dehydrogenase; Provisional	97.45
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.45
PRK05717	255	oxidoreductase; Validated	97.45
PRK06949	258	short chain dehydrogenase; Provisional	97.45
PRK09242	257	tropinone reductase; Provisional	97.44
PRK08264	238	short chain dehydrogenase; Validated	97.43
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.43
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.43
PRK07791	286	short chain dehydrogenase; Provisional	97.43
PRK06101	240	short chain dehydrogenase; Provisional	97.43
PRK12938	246	acetyacetyl-CoA reductase; Provisional	97.43
PRK08643	256	acetoin reductase; Validated	97.43
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.42
PRK07035	252	short chain dehydrogenase; Provisional	97.41
PRK08226	263	short chain dehydrogenase; Provisional	97.41
PRK06181	263	short chain dehydrogenase; Provisional	97.41
PRK07774	250	short chain dehydrogenase; Provisional	97.41
PRK06125	259	short chain dehydrogenase; Provisional	97.4
PRK06196	315	oxidoreductase; Provisional	97.4
PRK10538	248	malonic semialdehyde reductase; Provisional	97.4
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.4
PRK07024	257	short chain dehydrogenase; Provisional	97.39
PRK08589	272	short chain dehydrogenase; Validated	97.38
PRK06057	255	short chain dehydrogenase; Provisional	97.38
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.37
PRK07067	257	sorbitol dehydrogenase; Provisional	97.37
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.37
PRK06940	275	short chain dehydrogenase; Provisional	97.37
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.37
PRK06484	520	short chain dehydrogenase; Validated	97.36
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.36
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.35
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.35
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.34
KOG1205|consensus	282		97.33
PRK06482	276	short chain dehydrogenase; Provisional	97.33
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.32
PRK07832	272	short chain dehydrogenase; Provisional	97.32
PLN02780	320	ketoreductase/ oxidoreductase	97.32
PRK07454	241	short chain dehydrogenase; Provisional	97.32
PRK08303	305	short chain dehydrogenase; Provisional	97.32
PRK05875	276	short chain dehydrogenase; Provisional	97.31
PRK06197	306	short chain dehydrogenase; Provisional	97.31
PRK08017	256	oxidoreductase; Provisional	97.31
PRK12743	256	oxidoreductase; Provisional	97.31
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.3
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.29
PRK06484	520	short chain dehydrogenase; Validated	97.29
PRK09186	256	flagellin modification protein A; Provisional	97.29
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.29
PRK08278	273	short chain dehydrogenase; Provisional	97.28
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.28
PRK06953	222	short chain dehydrogenase; Provisional	97.27
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.27
PRK07856	252	short chain dehydrogenase; Provisional	97.27
PLN02253	280	xanthoxin dehydrogenase	97.27
PRK07806	248	short chain dehydrogenase; Provisional	97.26
PRK12828	239	short chain dehydrogenase; Provisional	97.26
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.26
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.25
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.25
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.24
PRK08263	275	short chain dehydrogenase; Provisional	97.24
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.24
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.24
PRK12746	254	short chain dehydrogenase; Provisional	97.23
KOG1199|consensus	260		97.23
PRK07326	237	short chain dehydrogenase; Provisional	97.22
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.22
PRK06914	280	short chain dehydrogenase; Provisional	97.21
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.21
PRK07074	257	short chain dehydrogenase; Provisional	97.19
PRK07060	245	short chain dehydrogenase; Provisional	97.19
PRK05650	270	short chain dehydrogenase; Provisional	97.19
PRK06128	300	oxidoreductase; Provisional	97.19
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.18
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.18
PRK05855	582	short chain dehydrogenase; Validated	97.17
PRK12937	245	short chain dehydrogenase; Provisional	97.16
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.16
PRK07775	274	short chain dehydrogenase; Provisional	97.14
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.14
PRK06701	290	short chain dehydrogenase; Provisional	97.13
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.13
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	97.12
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.11
PRK09134	258	short chain dehydrogenase; Provisional	97.1
PRK12935	247	acetoacetyl-CoA reductase; Provisional	97.1
KOG1209|consensus	289		97.1
PRK07102	243	short chain dehydrogenase; Provisional	97.09
PRK06398	258	aldose dehydrogenase; Validated	97.09
PLN03209	576	translocon at the inner envelope of chloroplast su	97.08
PRK09291	257	short chain dehydrogenase; Provisional	97.08
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.08
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.07
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	97.07
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	97.07
PRK06947	248	glucose-1-dehydrogenase; Provisional	97.06
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.06
PRK12742	237	oxidoreductase; Provisional	97.05
PRK06483	236	dihydromonapterin reductase; Provisional	97.04
PRK08703	239	short chain dehydrogenase; Provisional	97.04
PRK06523	260	short chain dehydrogenase; Provisional	97.03
KOG1201|consensus	300		97.03
PRK07577	234	short chain dehydrogenase; Provisional	97.02
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.01
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.0
PRK07985	294	oxidoreductase; Provisional	96.99
KOG0725|consensus	270		96.98
PRK06179	270	short chain dehydrogenase; Provisional	96.98
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.97
PRK05884	223	short chain dehydrogenase; Provisional	96.97
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.97
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.96
KOG1014|consensus	312		96.96
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.95
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.93
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.92
PRK05599	246	hypothetical protein; Provisional	96.91
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.91
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.9
PRK07023	243	short chain dehydrogenase; Provisional	96.9
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	96.89
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.89
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.89
PRK06123	248	short chain dehydrogenase; Provisional	96.89
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.89
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.89
PRK12827	249	short chain dehydrogenase; Provisional	96.88
KOG2017|consensus	427		96.88
PRK08219	227	short chain dehydrogenase; Provisional	96.88
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.87
PRK09135	249	pteridine reductase; Provisional	96.87
PRK12747	252	short chain dehydrogenase; Provisional	96.84
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	96.82
PRK12744	257	short chain dehydrogenase; Provisional	96.81
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.8
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.79
PRK07201	657	short chain dehydrogenase; Provisional	96.78
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.78
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.77
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.75
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.74
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	96.7
PRK07041	230	short chain dehydrogenase; Provisional	96.66
PLN02494	477	adenosylhomocysteinase	96.65
PRK12367	245	short chain dehydrogenase; Provisional	96.64
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.6
KOG1200|consensus	256		96.59
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.57
PRK12824	245	acetoacetyl-CoA reductase; Provisional	96.56
KOG1207|consensus	245		96.55
PRK07069	251	short chain dehydrogenase; Validated	96.55
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.53
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.49
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.48
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	96.47
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.44
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.43
PRK04148	134	hypothetical protein; Provisional	96.41
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.38
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.34
PLN00015	308	protochlorophyllide reductase	96.31
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.3
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.3
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.29
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.29
PRK08223	287	hypothetical protein; Validated	96.25
PRK06924	251	short chain dehydrogenase; Provisional	96.22
KOG1208|consensus	314		96.21
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.21
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.18
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.18
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.16
CHL00194	317	ycf39 Ycf39; Provisional	96.15
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.13
KOG1611|consensus	249		96.12
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	96.1
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.1
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	96.09

>KOG0024|consensus

Probab=100.00  E-value=2.7e-38  Score=281.89  Aligned_cols=255  Identities=59%  Similarity=1.018  Sum_probs=238.8

Q ss_pred             cCCcceeccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHH
Q psy1413          64 CLSPILRRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL  142 (408)
Q Consensus        64 ~~~~~~~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~  142 (408)
                      ....++.++.++.+ +..+.|.. .+.++++....++++|+++..+-.|.+|...+..+..+|+|..|++..+|..++.+
T Consensus         5 ~~A~vl~g~~di~i-~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~L   83 (354)
T KOG0024|consen    5 NLALVLRGKGDIRI-EQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHL   83 (354)
T ss_pred             cceeEEEccCceeE-eeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccccc
Confidence            45678899999999 58888776 78889999999999999999999999999999999999999999999999877766


Q ss_pred             hhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcC
Q psy1413         143 KATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTG  222 (408)
Q Consensus       143 ~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~  222 (408)
                      +.                                                                              
T Consensus        84 kV------------------------------------------------------------------------------   85 (354)
T KOG0024|consen   84 KV------------------------------------------------------------------------------   85 (354)
T ss_pred             cc------------------------------------------------------------------------------
Confidence            66                                                                              


Q ss_pred             CCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchh
Q psy1413         223 AGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPL  302 (408)
Q Consensus       223 ~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~  302 (408)
                                +|||+++|.-+|+.|..|++|++|.|+...+.++++.+|++++|++++++.++++|+++|++++|+++++
T Consensus        86 ----------GDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePL  155 (354)
T KOG0024|consen   86 ----------GDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPL  155 (354)
T ss_pred             ----------CCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccch
Confidence                      9999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHH
Q psy1413         303 SVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHII  382 (408)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~  382 (408)
                      ++++|+.++..+++++++||+|+|++|+....+|+++||..|++++-.+.|++.++++|++.+++.....+.+++.+.++
T Consensus       156 sV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~  235 (354)
T KOG0024|consen  156 SVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVE  235 (354)
T ss_pred             hhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999988777556788888998


Q ss_pred             HHhcCCCCceEEEcccchhhhhhcC
Q psy1413         383 ELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       383 ~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      .+.+.+.+|+.|||+|...+++.|+
T Consensus       236 ~~~g~~~~d~~~dCsG~~~~~~aai  260 (354)
T KOG0024|consen  236 KALGKKQPDVTFDCSGAEVTIRAAI  260 (354)
T ss_pred             hhccccCCCeEEEccCchHHHHHHH
Confidence            8887678999999999999988775

>KOG0024|consensus

Probab=100.00  E-value=5.6e-39  Score=286.25  Aligned_cols=233  Identities=41%  Similarity=0.648  Sum_probs=202.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      ++++|||+||+|.|.+|+.+.+..+.|+++|||.+|+|+++|+.|+++|+||||++.|...                   
T Consensus        36 i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~  115 (354)
T KOG0024|consen   36 IKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMV  115 (354)
T ss_pred             eeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccc
Confidence            5799999999999999998888888999999999999999999999999999999887432                   


Q ss_pred             ---------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC
Q psy1413          62 ---------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        62 ---------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                                     ...++.|+..|+++++ ++.++.++++..+.+...+.--.|++++|+|+|++|+.+...|+++|+
T Consensus       116 f~atpp~~G~la~y~~~~~dfc~KLPd~vs~-eeGAl~ePLsV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA  194 (354)
T KOG0024|consen  116 FCATPPVDGTLAEYYVHPADFCYKLPDNVSF-EEGALIEPLSVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGA  194 (354)
T ss_pred             cccCCCcCCceEEEEEechHheeeCCCCCch-hhcccccchhhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCC
Confidence                           2233466777888888 666777777766654443333358999999999999999888888876


Q ss_pred             -----------------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEcc
Q psy1413         127 -----------------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGA  156 (408)
Q Consensus       127 -----------------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~  156 (408)
                                                                     ..+.++++.|...   .++..++.+|+++++|+
T Consensus       195 ~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~  274 (354)
T KOG0024|consen  195 SDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGM  274 (354)
T ss_pred             CcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEecc
Confidence                                                           2555677777554   67999999999999999


Q ss_pred             CCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         157 GSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      .....++++..+..|++++.|++.+. .+|+.+++++++|++++++||||+|++++..+||+.+.+++...+|+++++.
T Consensus       275 g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~  353 (354)
T KOG0024|consen  275 GAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP  353 (354)
T ss_pred             CCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence            99999999999999999999999997 6999999999999999999999999999999999999999999999999864

>KOG0023|consensus

Probab=100.00  E-value=2.8e-35  Score=261.93  Aligned_cols=157  Identities=26%  Similarity=0.417  Sum_probs=126.0

Q ss_pred             cccccccccCCccccccceeecccC------CCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhh-hhhccCcC
Q psy1413         243 PCRTCTYCKEGRYNLCRQIFFCATP------PDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVH-ACRRAGVT  315 (408)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~-~~~~~~~~  315 (408)
                      +|++|++|.++.+++|++..+..+.      ...|+||+|.++++..+++||+++++++||++.|++.++| +|.+..+.
T Consensus       101 sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g~~  180 (360)
T KOG0023|consen  101 SCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPLKRSGLG  180 (360)
T ss_pred             cccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehhHHcCCC
Confidence            3889999999999999974443222      2457799999999999999999999999999999888666 56888899


Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh-hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILE-HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      |+.++.|.|+||+|++++|+++++|.| |++++++. +|.+..+.+||+..++..+   ..++.+.+...+++ ++|.+.
T Consensus       181 pG~~vgI~GlGGLGh~aVq~AKAMG~r-V~vis~~~~kkeea~~~LGAd~fv~~~~---d~d~~~~~~~~~dg-~~~~v~  255 (360)
T KOG0023|consen  181 PGKWVGIVGLGGLGHMAVQYAKAMGMR-VTVISTSSKKKEEAIKSLGADVFVDSTE---DPDIMKAIMKTTDG-GIDTVS  255 (360)
T ss_pred             CCcEEEEecCcccchHHHHHHHHhCcE-EEEEeCCchhHHHHHHhcCcceeEEecC---CHHHHHHHHHhhcC-cceeee
Confidence            999999999977999999999999999 88888887 4555568899999999873   17787788777643 444444


Q ss_pred             Ecccchhhhhhc
Q psy1413         395 DCSGIESTIKLG  406 (408)
Q Consensus       395 d~~g~~~~~~~~  406 (408)
                      +-  ....++.+
T Consensus       256 ~~--a~~~~~~~  265 (360)
T KOG0023|consen  256 NL--AEHALEPL  265 (360)
T ss_pred             ec--cccchHHH
Confidence            33  55555544

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=5.2e-34  Score=262.58  Aligned_cols=221  Identities=26%  Similarity=0.308  Sum_probs=171.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEE-ccCcccccCCcceec--------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF-VPEFRNVCLSPILRR--------   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~-~~~~~~~~~~~~~~~--------   71 (408)
                      |++|||||||+|.+ .|.++..  .+|+|||||.+|+|+++|++|++||+||||.+ +....|..|.+|..+        
T Consensus        35 v~~~GVChsDlH~~-~G~~~~~--~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~  111 (339)
T COG1064          35 VEACGVCHTDLHVA-KGDWPVP--KLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQ  111 (339)
T ss_pred             EEEEeecchhhhhh-cCCCCCC--CCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCc
Confidence            57999999999999 4544433  59999999999999999999999999999987 554444434433333        


Q ss_pred             -------------------------cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC
Q psy1413          72 -------------------------RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        72 -------------------------p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                                               |+++++++++++.....|.+.+.....--+|++|+|+|.|++|++++|+|+++|+
T Consensus       112 ~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga  191 (339)
T COG1064         112 KITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA  191 (339)
T ss_pred             cccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC
Confidence                                     3333333333333333333332222111248999999999999999999998886


Q ss_pred             -------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCC-CC-cccC
Q psy1413         127 -------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGS-QD-VKIP  164 (408)
Q Consensus       127 -------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~-~~-~~~~  164 (408)
                                                           .++.++++++ ..   ++++.|+++|+++.+|.+. .+ ..++
T Consensus       192 ~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~  270 (339)
T COG1064         192 EVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLP  270 (339)
T ss_pred             eEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCC
Confidence                                                 1677777777 43   6899999999999999985 44 5688


Q ss_pred             HHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         165 LVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       165 ~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                      ...+++++++|.|+...+ .++++++++..+|++++.  +.++++|+|+++||+.|++++..+.
T Consensus       271 ~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR  332 (339)
T COG1064         271 AFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGR  332 (339)
T ss_pred             HHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeE
Confidence            899999999999999888 899999999999999765  4489999999999999999876543

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=1.4e-33  Score=259.74  Aligned_cols=229  Identities=31%  Similarity=0.524  Sum_probs=202.1

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ ++.+.|.+.+.++++.+.++++|+.++.++- |-.+.  ..++...|+|..|+|..+|+.++.++.          
T Consensus        16 l~i-~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~-G~~~~--~~~P~ipGHEivG~V~~vG~~V~~~k~----------   81 (339)
T COG1064          16 LEI-EEVPVPEPGPGEVLIKVEACGVCHTDLHVAK-GDWPV--PKLPLIPGHEIVGTVVEVGEGVTGLKV----------   81 (339)
T ss_pred             ceE-EeccCCCCCCCeEEEEEEEEeecchhhhhhc-CCCCC--CCCCccCCcceEEEEEEecCCCccCCC----------
Confidence            555 6778888999999999999999999998863 22222  238899999999999999987665555          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    +|
T Consensus        82 ------------------------------------------------------------------------------GD   83 (339)
T COG1064          82 ------------------------------------------------------------------------------GD   83 (339)
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          99


Q ss_pred             ceee-cCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhh-hhhhhhhcc
Q psy1413         235 RVAI-EPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLS-VGVHACRRA  312 (408)
Q Consensus       235 ~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~-~~~~~~~~~  312 (408)
                      +|.+ .+..+|++|++|.+|.+++|++.+..|++ .+|+|+||+++++++++++|++++++.||++.|+. |+|.++++.
T Consensus        84 rVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~-~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~~  162 (339)
T COG1064          84 RVGVGWLVISCGECEYCRSGNENLCPNQKITGYT-TDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKA  162 (339)
T ss_pred             EEEecCccCCCCCCccccCcccccCCCcccccee-ecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhhc
Confidence            9999 88899999999999999999998888886 89999999999999999999999999999999765 578889999


Q ss_pred             CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         313 GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       313 ~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .++|+++++|+|.||+|++++|+|+++|++ |++++++++|++.++++||+++++.++    ++..+.+++.     +|+
T Consensus       163 ~~~pG~~V~I~G~GGlGh~avQ~Aka~ga~-Via~~~~~~K~e~a~~lGAd~~i~~~~----~~~~~~~~~~-----~d~  232 (339)
T COG1064         163 NVKPGKWVAVVGAGGLGHMAVQYAKAMGAE-VIAITRSEEKLELAKKLGADHVINSSD----SDALEAVKEI-----ADA  232 (339)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHcCCe-EEEEeCChHHHHHHHHhCCcEEEEcCC----chhhHHhHhh-----CcE
Confidence            999999999999999999999999999976 999999999999999999999999875    5555555553     999


Q ss_pred             EEEcccchhhhhhcC
Q psy1413         393 TIDCSGIESTIKLGM  407 (408)
Q Consensus       393 i~d~~g~~~~~~~~~  407 (408)
                      ++|+++ ..++++++
T Consensus       233 ii~tv~-~~~~~~~l  246 (339)
T COG1064         233 IIDTVG-PATLEPSL  246 (339)
T ss_pred             EEECCC-hhhHHHHH
Confidence            999999 88888765

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=99.97  E-value=6.7e-31  Score=236.76  Aligned_cols=133  Identities=27%  Similarity=0.366  Sum_probs=121.3

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccchhhhhhh-h-hhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEe
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVH-A-CRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~-~-~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      ++|++|.++++..+++++++.+++.++++.|..++-. + ++..++++++++.|.|.|++|++++|-|+..||.+||+++
T Consensus       138 stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD  217 (366)
T COG1062         138 STFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVD  217 (366)
T ss_pred             ccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEe
Confidence            5899999999999999999999999999997655444 3 3889999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      .+++|+++++++||++++|.++.   .++.+.+.++|++ ++|++|||+|+...+.+|+
T Consensus       218 ~~~~Kl~~A~~fGAT~~vn~~~~---~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al  272 (366)
T COG1062         218 INPEKLELAKKFGATHFVNPKEV---DDVVEAIVELTDG-GADYAFECVGNVEVMRQAL  272 (366)
T ss_pred             CCHHHHHHHHhcCCceeecchhh---hhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHH
Confidence            99999999999999999998871   2799999999965 9999999999999888775

>KOG0022|consensus

Probab=99.97  E-value=3.4e-29  Score=222.06  Aligned_cols=134  Identities=31%  Similarity=0.394  Sum_probs=122.1

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEe
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      .+|+||.+++...+++|++..|++..+++.| .+|.|-+. ..+++++++++.|.|-|++|++++|-++++||.+||.+|
T Consensus       145 StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvD  224 (375)
T KOG0022|consen  145 STFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVD  224 (375)
T ss_pred             ccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEe
Confidence            4799999999999999999999999999985 55566665 779999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      .+++|.+.++++|+++.+|..+..  +.+.+.++++|+ .|+|+-|||+|+.+++.+|+
T Consensus       225 iN~~Kf~~ak~fGaTe~iNp~d~~--~~i~evi~EmTd-gGvDysfEc~G~~~~m~~al  280 (375)
T KOG0022|consen  225 INPDKFEKAKEFGATEFINPKDLK--KPIQEVIIEMTD-GGVDYSFECIGNVSTMRAAL  280 (375)
T ss_pred             cCHHHHHHHHhcCcceecChhhcc--ccHHHHHHHHhc-CCceEEEEecCCHHHHHHHH
Confidence            999999999999999999988532  258999999996 69999999999999998876

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.96  E-value=1.5e-29  Score=241.63  Aligned_cols=229  Identities=31%  Similarity=0.445  Sum_probs=174.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCc-cccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcceec--------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPM-IVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRR--------   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~-i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~--------   71 (408)
                      |+++|||+||+|.++++.   ...++|. ++|||++|+|+++| .++.+|+||||++.+...|..+.+|..+        
T Consensus        32 v~~~gICGSDlh~~~g~~---~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~  107 (350)
T COG1063          32 VTATGICGSDLHIYRGGE---PFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENP  107 (350)
T ss_pred             EEEEeEchhhhhhccCCC---CCCCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCc
Confidence            578999999999996543   2234455 99999999999999 7788999999998886543322222111        


Q ss_pred             ----------------cceeeecccc---cCCCC--CCcceEEEEeeee----------ecCCeEEEEccCccccccccc
Q psy1413          72 ----------------RFSLRFREQK---PIEDP--DDHEVLLEMHCVG----------ICGSDVHYLTHGQIGDFRLSD  120 (408)
Q Consensus        72 ----------------p~~~~~~~~~---~lp~~--~~~~~~~~~~~~~----------~~g~~vlv~g~G~vG~~~i~~  120 (408)
                                      .+++..+...   .+|..  ...+.+.++.+++          ..+++++|+|+|++|++++++
T Consensus       108 ~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~  187 (350)
T COG1063         108 GFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIAL  187 (350)
T ss_pred             cccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHH
Confidence                            1222222111   11221  1112233333333          234589999999999999988


Q ss_pred             cccccC--------------------------------------------cceeEEEccCchH---HHHhhccCCcEEEE
Q psy1413         121 PMIVGH--------------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVI  153 (408)
Q Consensus       121 a~~~G~--------------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~  153 (408)
                      ++.+|+                                            .++.+++++|...   +++++++++|+++.
T Consensus       188 a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~  267 (350)
T COG1063         188 AKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVV  267 (350)
T ss_pred             HHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEE
Confidence            887775                                            3678899999763   79999999999999


Q ss_pred             EccCCCCc-ccCHHHHHhcCcEEEEeec-CC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         154 VGAGSQDV-KIPLVLTMTKEIDIRGVFR-YA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       154 ~G~~~~~~-~~~~~~~~~~~~~l~g~~~-~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                      +|.+.... .++...++.|++++.|++. .. .+|+.+++++++|+++++++++|+++++|+++||+.+.+.+....|++
T Consensus       268 vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~  347 (350)
T COG1063         268 VGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVV  347 (350)
T ss_pred             EeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEE
Confidence            99998776 6888899999999999965 44 789999999999999999999999999999999999999777688998


Q ss_pred             EEc
Q psy1413         231 IHC  233 (408)
Q Consensus       231 i~~  233 (408)
                      +.+
T Consensus       348 i~~  350 (350)
T COG1063         348 LKP  350 (350)
T ss_pred             ecC
Confidence            763

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-29  Score=243.44  Aligned_cols=229  Identities=24%  Similarity=0.367  Sum_probs=171.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCC--------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLS--------------   66 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~--------------   66 (408)
                      |+++|||++|++.+..+..+.++.++|.++|||++|+|+++  +|++|++||||.+.+...|..+.              
T Consensus        34 v~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~  111 (343)
T PRK09880         34 ITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMR  111 (343)
T ss_pred             EEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcc
Confidence            57999999999988545433334568999999999999999  78999999999876543222211              


Q ss_pred             ------------------------cceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccc
Q psy1413          67 ------------------------PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPM  122 (408)
Q Consensus        67 ------------------------~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~  122 (408)
                                              .++..|+++++ +.+.+..++.+++.+........+++++|.|+|++|++++|+++
T Consensus       112 ~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~-~~aa~~~~~~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak  190 (343)
T PRK09880        112 FFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADE-KVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVK  190 (343)
T ss_pred             eeecccccCCCCCceeeeEEechHHeEECCCCCCH-HHHHhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence                                    22223333333 22222222222221111111125789999999999999999988


Q ss_pred             cccC----------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCC
Q psy1413         123 IVGH----------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQ  159 (408)
Q Consensus       123 ~~G~----------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~  159 (408)
                      .+|+                                        .++.+++++|...   +++++++++|+++.+|.+..
T Consensus       191 ~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~  270 (343)
T PRK09880        191 TLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA  270 (343)
T ss_pred             HcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC
Confidence            7764                                        1466777887642   68999999999999998777


Q ss_pred             CcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         160 DVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       160 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      ..++++..+++|++++.|++...+++++++++++++++++.++++++|+|+|+++||+.+.+++. .+|+++.+
T Consensus       271 ~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~gKvvl~~  343 (343)
T PRK09880        271 PPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQ-AAKVQLVF  343 (343)
T ss_pred             CCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCC-ceEEEEeC
Confidence            77888888999999999998777899999999999999999999999999999999999988753 67888753

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=99.95  E-value=1e-27  Score=229.79  Aligned_cols=243  Identities=30%  Similarity=0.554  Sum_probs=197.5

Q ss_pred             CCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhh
Q psy1413          65 LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA  144 (408)
Q Consensus        65 ~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~  144 (408)
                      ...++..+..+.+ +..++| +.+.++++.+.++++++.++.++-.|..+......+..+|+|+.|+|..++  .+.++.
T Consensus         6 ~~~~~~~~~~~~~-~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v~--v~~~~v   81 (343)
T PRK09880          6 QSCVVAGKKDVAV-TEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHSD--SSGLKE   81 (343)
T ss_pred             eEEEEecCCceEE-EecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEec--CccCCC
Confidence            3456677888888 666667 467888999999999999987653233333334567789999999999982  233444


Q ss_pred             ccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         145 TRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       145 l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                                                                                                      
T Consensus        82 --------------------------------------------------------------------------------   81 (343)
T PRK09880         82 --------------------------------------------------------------------------------   81 (343)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CceEEEEEcCceeecCCCcccccccccCCccccccceeecccC----CCCccceeEEeeccceeeeCCCCCCcccccccc
Q psy1413         225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATP----PDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE  300 (408)
Q Consensus       225 ~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~  300 (408)
                              +|+|...+..+|++|.+|..+.++.|++...+|..    ..+|+|++|+.++++.++++|++++++++++..
T Consensus        82 --------GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~  153 (343)
T PRK09880         82 --------GQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAE  153 (343)
T ss_pred             --------CCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhc
Confidence                    99999999999999999999999999987776642    247999999999999999999999988877777


Q ss_pred             hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHH
Q psy1413         301 PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTH  380 (408)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~  380 (408)
                      +++++++++.+....++++++|+|+|++|++++|+++.+|+++|++++++++|++.++++|++.++++++    +++.+.
T Consensus       154 ~~~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~----~~~~~~  229 (343)
T PRK09880        154 PLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN----DDLDHY  229 (343)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc----ccHHHH
Confidence            8889999997777778999999988999999999999999988999999999999999999999999866    344332


Q ss_pred             HHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         381 IIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       381 ~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      .+ .  ..++|++|||+|++.+++.+
T Consensus       230 ~~-~--~g~~D~vid~~G~~~~~~~~  252 (343)
T PRK09880        230 KA-E--KGYFDVSFEVSGHPSSINTC  252 (343)
T ss_pred             hc-c--CCCCCEEEECCCCHHHHHHH
Confidence            22 1  23699999999987666544

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.95  E-value=1.6e-27  Score=227.76  Aligned_cols=233  Identities=38%  Similarity=0.643  Sum_probs=188.8

Q ss_pred             ccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccc-cccCcceeEEEccCchHHHHhhccCCcEEEEEccC
Q psy1413          79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPM-IVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAG  157 (408)
Q Consensus        79 ~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~-~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~  157 (408)
                      +..+.|.+.+..+++.+..+++||+++.++..+..   ...... .+|+|+.|+|+.+| ....++.             
T Consensus        16 ~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~---~~~~~~~i~GHE~~G~V~evG-~~~~~~~-------------   78 (350)
T COG1063          16 EEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEP---FVPPGDIILGHEFVGEVVEVG-VVRGFKV-------------   78 (350)
T ss_pred             ccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCC---CCCCCCcccCccceEEEEEec-cccCCCC-------------
Confidence            44444556667789999999999999988753321   112222 78999999999999 4344555             


Q ss_pred             CCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCcee
Q psy1413         158 SQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVA  237 (408)
Q Consensus       158 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~  237 (408)
                                                                                                 +|+|+
T Consensus        79 ---------------------------------------------------------------------------GdrVv   83 (350)
T COG1063          79 ---------------------------------------------------------------------------GDRVV   83 (350)
T ss_pred             ---------------------------------------------------------------------------CCEEE
Confidence                                                                                       99999


Q ss_pred             ecCCCcccccccccCCccccccceeecccCC----CCccceeEEeeccceeeeC-CCCCCcccccccchhhhhhhhh-hc
Q psy1413         238 IEPGVPCRTCTYCKEGRYNLCRQIFFCATPP----DHGNLSRYYRHAADFCHKL-PDHVSLEEGALLEPLSVGVHAC-RR  311 (408)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~-p~~~~~~~aa~~~~~~~~~~~~-~~  311 (408)
                      +.|..+|+.|.+|++|.+++|++..++|+..    .+|+|+||+.++.+..+.+ |++++.+++++.+++++++++. ..
T Consensus        84 v~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~~~~~a~~  163 (350)
T COG1063          84 VEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAER  163 (350)
T ss_pred             ECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhhhhhhhhc
Confidence            9999999999999999999999766665432    6899999999998666555 7776878888889999997763 33


Q ss_pred             cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      ....++++++|+|+|++|++++++++.+|+.+|++++++++|++.+++ .|++.+++...    ++....+.+++.+.++
T Consensus       164 ~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~----~~~~~~~~~~t~g~g~  239 (350)
T COG1063         164 AAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE----DDAGAEILELTGGRGA  239 (350)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc----ccHHHHHHHHhCCCCC
Confidence            444555599999999999999999999999999999999999999988 66777776655    4788888899988899


Q ss_pred             ceEEEcccchhhhhhcC
Q psy1413         391 DKTIDCSGIESTIKLGM  407 (408)
Q Consensus       391 d~i~d~~g~~~~~~~~~  407 (408)
                      |++|||+|...++++++
T Consensus       240 D~vie~~G~~~~~~~ai  256 (350)
T COG1063         240 DVVIEAVGSPPALDQAL  256 (350)
T ss_pred             CEEEECCCCHHHHHHHH
Confidence            99999999888777764

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.95  E-value=1.4e-28  Score=232.13  Aligned_cols=225  Identities=18%  Similarity=0.245  Sum_probs=170.4

Q ss_pred             CCeeeec-ccchhhhhcCCCCCCC-CCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------------Ccccc
Q psy1413           1 MHCVGIC-GSDVHYLTHGQIGDFR-LSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------------EFRNV   63 (408)
Q Consensus         1 V~a~gic-~sDl~~~~~g~~~~~~-~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------------~~~~~   63 (408)
                      |+++||| ++|++.+ .|..+..+ ..+|.++|||++|+|+++|+++ +|++||||++..               ++...
T Consensus        32 v~~~gi~~~~D~~~~-~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v  109 (308)
T TIGR01202        32 IWYSGISTGTEKLFW-NGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVT  109 (308)
T ss_pred             EEEEeeccCchhHHh-cCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEc
Confidence            4689995 8999977 44332222 3679999999999999999998 699999998632               22233


Q ss_pred             cCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC-----------------
Q psy1413          64 CLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH-----------------  126 (408)
Q Consensus        64 ~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~-----------------  126 (408)
                      +.+.++..|+.++. +.+.++ +..+++.+... ....+++++|+|+|++|++++|+++.+|+                 
T Consensus       110 ~~~~~~~ip~~~~~-~~a~~~-~~~~a~~~~~~-~~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~  186 (308)
T TIGR01202       110 PASRVCRLDPALGP-QGALLA-LAATARHAVAG-AEVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT  186 (308)
T ss_pred             CHHHceeCCCCCCH-HHHhhh-HHHHHHHHHHh-cccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh
Confidence            34444555665554 332222 22233221111 12357889999999999999999988775                 


Q ss_pred             -------------cceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHH
Q psy1413         127 -------------EASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIAL  189 (408)
Q Consensus       127 -------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~  189 (408)
                                   .++.+++++|..   .+++++++++|+++.+|.+..+.++++..++.|++++.++.... +++++++
T Consensus       187 ~~~~i~~~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  266 (308)
T TIGR01202       187 GYEVLDPEKDPRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVR  266 (308)
T ss_pred             hccccChhhccCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHH
Confidence                         135678888864   26799999999999999887777788788889999999988765 7899999


Q ss_pred             HHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         190 AMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       190 ~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      +++++|+++++++++++|||+|+++||+.+.+++ ..+|+++
T Consensus       267 ~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~-~~~Kv~~  307 (308)
T TIGR01202       267 ELIESGALSLDGLITHQRPASDAAEAYMTAFSDP-DCLKMIL  307 (308)
T ss_pred             HHHHcCCCChhhccceeecHHHHHHHHHHHhcCc-CceEEEe
Confidence            9999999999999999999999999999988764 4678776

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=99.95  E-value=2.2e-27  Score=229.85  Aligned_cols=220  Identities=24%  Similarity=0.348  Sum_probs=161.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------   62 (408)
                      |+++|||++|++.+. |.   .+..+|.++|||++|+|+++|++|+++++||||++.+...+                  
T Consensus        40 v~~~gi~~~D~~~~~-g~---~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~  115 (371)
T cd08281          40 IAAAGLCHSDLSVIN-GD---RPRPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGA  115 (371)
T ss_pred             EEEEeeCccchHhhc-CC---CCCCCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCcc
Confidence            468999999999884 32   33467999999999999999999999999999986432111                  


Q ss_pred             ------------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeE
Q psy1413          63 ------------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDV  105 (408)
Q Consensus        63 ------------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~v  105 (408)
                                                          .+...++..|+++++++++.++....+++.+......+ .+++|
T Consensus       116 ~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~V  195 (371)
T cd08281         116 AANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSV  195 (371)
T ss_pred             ccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEE
Confidence                                                11122233344444433333322222222111111222 47899


Q ss_pred             EEEccCccccccccccccccC------------------------------------------cceeEEEccCchH---H
Q psy1413         106 HYLTHGQIGDFRLSDPMIVGH------------------------------------------EASGIVSKVGAKV---K  140 (408)
Q Consensus       106 lv~g~G~vG~~~i~~a~~~G~------------------------------------------~~~~vv~~~g~~~---~  140 (408)
                      +|.|+|++|++++|+++.+|+                                          .++.+++++|...   .
T Consensus       196 lV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~  275 (371)
T cd08281         196 AVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALET  275 (371)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHH
Confidence            999999999999998887765                                          1355667776432   5


Q ss_pred             HHhhccCCcEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccchHHH
Q psy1413         141 HLKATRPGGCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLEDTLH  214 (408)
Q Consensus       141 ~~~~l~~gG~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~  214 (408)
                      ++++++++|+++.+|....  ..+++...+++|++++.|++..    +++++++++++++|+++++++++++|+|+|+++
T Consensus       276 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~  355 (371)
T cd08281         276 AYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINE  355 (371)
T ss_pred             HHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHH
Confidence            7899999999999997643  4567778899999999998865    367899999999999999999999999999999


Q ss_pred             HHHHHHcCCC
Q psy1413         215 AFETAKTGAG  224 (408)
Q Consensus       215 a~~~~~~~~~  224 (408)
                      ||+.+.+++.
T Consensus       356 A~~~~~~~~~  365 (371)
T cd08281         356 GFDRLAAGEA  365 (371)
T ss_pred             HHHHHhCCCc
Confidence            9999998754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=99.94  E-value=2.9e-26  Score=219.51  Aligned_cols=241  Identities=35%  Similarity=0.577  Sum_probs=198.5

Q ss_pred             eeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCC
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPG  148 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~g  148 (408)
                      +..++.+.+ +..++|.+.+.++++.+.++++++.++.+...+...  ....+...|.|+.|+|..+|+..+.++.    
T Consensus         6 ~~~~~~l~~-~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~----   78 (339)
T cd08239           6 FPGDRTVEL-REFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRV----   78 (339)
T ss_pred             EecCCceEE-EecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCC----
Confidence            445666777 667888888889999999999998887664222111  1123467899999999999975443443    


Q ss_pred             cEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceE
Q psy1413         149 GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIK  228 (408)
Q Consensus       149 G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~k  228 (408)
                                                                                                      
T Consensus        79 --------------------------------------------------------------------------------   78 (339)
T cd08239          79 --------------------------------------------------------------------------------   78 (339)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEcCceeecCCCcccccccccCCccccccceee-cccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhh
Q psy1413         229 VMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFF-CATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGV  306 (408)
Q Consensus       229 vvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~  306 (408)
                          +|+|...+..+|+.|..|..|++++|.+... +|. ..+|+|++|+.++++.++++|++++.++++.++ +..+++
T Consensus        79 ----Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~-~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~  153 (339)
T cd08239          79 ----GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGW-NRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAY  153 (339)
T ss_pred             ----CCEEEECCCCCCCCChhhhCcCcccCcCccccccc-CCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHH
Confidence                8999999999999999999999999987654 343 357999999999999999999999998888876 677899


Q ss_pred             hhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         307 HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       307 ~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      +++....+++++++||+|+|++|+.++|+++.+|+++|++++++++|++.++++|++.++++++    ++ .+.+.+++.
T Consensus       154 ~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~----~~-~~~~~~~~~  228 (339)
T cd08239         154 HALRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ----DD-VQEIRELTS  228 (339)
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc----ch-HHHHHHHhC
Confidence            9988788899999999988999999999999999998888999999999999999999999876    44 666777777


Q ss_pred             CCCCceEEEcccchhhhhhc
Q psy1413         387 GEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       387 ~~~~d~i~d~~g~~~~~~~~  406 (408)
                      ++++|++|||+|+...+..+
T Consensus       229 ~~~~d~vid~~g~~~~~~~~  248 (339)
T cd08239         229 GAGADVAIECSGNTAARRLA  248 (339)
T ss_pred             CCCCCEEEECCCCHHHHHHH
Confidence            77999999999988765543

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=99.94  E-value=6.8e-27  Score=225.26  Aligned_cols=226  Identities=19%  Similarity=0.195  Sum_probs=164.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      |+++|||++|++.+. |.++  ...+|.++|||++|+|+++|++|++|++||||++.+..                    
T Consensus        44 v~~~gic~sD~~~~~-g~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~  120 (360)
T PLN02586         44 ILYCGVCHSDLHTIK-NEWG--FTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKM  120 (360)
T ss_pred             EEEecCChhhHhhhc-CCcC--CCCCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCc
Confidence            468999999999884 4322  23579999999999999999999999999999753211                    


Q ss_pred             ---------------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccc
Q psy1413          61 ---------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRL  118 (408)
Q Consensus        61 ---------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i  118 (408)
                                           ...+...++..|+++++++.++++....+++.+...... ..+++|+|.|+|++|++++
T Consensus       121 ~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~av  200 (360)
T PLN02586        121 IFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAV  200 (360)
T ss_pred             cccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHH
Confidence                                 111122333445555553344333333332211111111 2578999999999999999


Q ss_pred             cccccccCc--------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEccC
Q psy1413         119 SDPMIVGHE--------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVGAG  157 (408)
Q Consensus       119 ~~a~~~G~~--------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~  157 (408)
                      |+++.+|+.                                      ++.+++++|...   +++++++++|+++.+|..
T Consensus       201 q~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~  280 (360)
T PLN02586        201 KIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLP  280 (360)
T ss_pred             HHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCC
Confidence            888776641                                      245566666432   589999999999999987


Q ss_pred             CCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         158 SQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       158 ~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      ..+.++++..++.++..+.+++..+ .+++++++++++|++++.  + ++|+|+|+++||+.+.+++. .+|++++.
T Consensus       281 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~-~gkvvi~~  353 (360)
T PLN02586        281 EKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDV-RYRFVIDV  353 (360)
T ss_pred             CCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            6667788888889999999988766 789999999999999753  4 68999999999999998854 47888775

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.94  E-value=2.4e-27  Score=226.86  Aligned_cols=228  Identities=18%  Similarity=0.210  Sum_probs=163.3

Q ss_pred             CCeeeecccchhhhhcCCCCCC--CCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-----------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDF--RLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-----------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~--~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-----------------   61 (408)
                      |+++|||+||++.+. |..+..  ...+|.++|||++|+|+++|.+  +|++||||++.+...                 
T Consensus        32 v~a~gIc~sD~~~~~-G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~  108 (341)
T cd08237          32 PTYLSICHADQRYYQ-GNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRF  108 (341)
T ss_pred             EEEEEEcCccHHHHc-CCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcce
Confidence            579999999999984 432211  2357999999999999998764  799999998765321                 


Q ss_pred             -------------cccCCcceeccceeeecccccCCCCCCcceEEEE--eeee-ecCCeEEEEccCcccccccccccc-c
Q psy1413          62 -------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEM--HCVG-ICGSDVHYLTHGQIGDFRLSDPMI-V  124 (408)
Q Consensus        62 -------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~--~~~~-~~g~~vlv~g~G~vG~~~i~~a~~-~  124 (408)
                                   ..+.+.++..|+++++ +.+.++++..+++.+..  .... ..+++|+|.|+|++|++++|+++. +
T Consensus       109 ~g~~~~G~~aey~~v~~~~~~~vP~~l~~-~~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~  187 (341)
T cd08237         109 RSSGYDGFMQDYVFLPPDRLVKLPDNVDP-EVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIY  187 (341)
T ss_pred             eEecCCCceEEEEEEchHHeEECCCCCCh-HHhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhc
Confidence                         1222233444555555 23333333333321110  0111 247899999999999999888764 4


Q ss_pred             cC--------------------------------cceeEEEccCch------HHHHhhccCCcEEEEEccCCCCcccCHH
Q psy1413         125 GH--------------------------------EASGIVSKVGAK------VKHLKATRPGGCLVIVGAGSQDVKIPLV  166 (408)
Q Consensus       125 G~--------------------------------~~~~vv~~~g~~------~~~~~~l~~gG~iv~~G~~~~~~~~~~~  166 (408)
                      |.                                .++.+++++|..      .+++++++++|+++.+|.+..+.+++..
T Consensus       188 g~~~vi~~~~~~~k~~~a~~~~~~~~~~~~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~  267 (341)
T cd08237         188 PESKLVVFGKHQEKLDLFSFADETYLIDDIPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTR  267 (341)
T ss_pred             CCCcEEEEeCcHhHHHHHhhcCceeehhhhhhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHH
Confidence            42                                257788999841      3689999999999999987667778888


Q ss_pred             HHHhcCcEEEEeecCC-CcHHHHHHHHHcC---CCCCCCceeeeeccc---hHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         167 LTMTKEIDIRGVFRYA-NDYPIALAMVASG---KVDVKKLITHNYLLE---DTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       167 ~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g---~~~~~~~i~~~~~l~---~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      .++.|++++.|++..+ +++++++++++++   +.+++++|+|+|+|+   |+.++|+.+.++  ..+|++++++
T Consensus       268 ~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~--~~gKvvi~~~  340 (341)
T cd08237         268 MVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN--SWGKTVMEWE  340 (341)
T ss_pred             HHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc--CcceEEEEee
Confidence            8999999999998765 7899999999999   446889999999985   566666655543  4678888753

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=99.94  E-value=7.5e-27  Score=223.57  Aligned_cols=228  Identities=25%  Similarity=0.322  Sum_probs=168.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |.++|||++|++.+..++..  +..+|.++|||++|+|+++|++|+++++||||+..+...                   
T Consensus        31 v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~  108 (339)
T cd08239          31 VKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKR  108 (339)
T ss_pred             EEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcc
Confidence            46899999999988543211  224589999999999999999999999999998765322                   


Q ss_pred             ---------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC
Q psy1413          62 ---------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        62 ---------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                                     ..+...++..|+++++++.+.++.+..+++.+.....-..+++++|+|+|++|++++|+++.+|+
T Consensus       109 ~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~  188 (339)
T cd08239         109 AAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGLGALMLARALGA  188 (339)
T ss_pred             cccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                           12222334445555554444444444444322111111248899999999999999988887665


Q ss_pred             c------------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEccCCCCc
Q psy1413         127 E------------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDV  161 (408)
Q Consensus       127 ~------------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~  161 (408)
                      .                                          ++.+++++|...   +++++++++|+++.+|..... 
T Consensus       189 ~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-  267 (339)
T cd08239         189 EDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-  267 (339)
T ss_pred             CEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-
Confidence            2                                          334555555432   578999999999999976543 


Q ss_pred             ccCH-HHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         162 KIPL-VLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       162 ~~~~-~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      +++. ..++++++++.|++..+ +++++++++++++++++.++++++|+|+|+++||+.+.+++  .+|+++++
T Consensus       268 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~--~gKvvi~~  339 (339)
T cd08239         268 TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE--SGKVVFVF  339 (339)
T ss_pred             ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC--ceEEEEeC
Confidence            3443 46788999999999876 78999999999999999999999999999999999998764  57888764

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=99.94  E-value=6.9e-26  Score=219.44  Aligned_cols=238  Identities=33%  Similarity=0.472  Sum_probs=194.7

Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL  151 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i  151 (408)
                      ++.+.. +..++|.+.+.++++.+.++++++.++.+.- |..   ....+..+|.|+.|+|..+|+....++.       
T Consensus        18 ~~~l~~-~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~-g~~---~~~~p~i~GhE~~G~V~~vG~~v~~~~~-------   85 (371)
T cd08281          18 SRPLVI-EEVELDPPGPGEVLVKIAAAGLCHSDLSVIN-GDR---PRPLPMALGHEAAGVVVEVGEGVTDLEV-------   85 (371)
T ss_pred             CCCceE-EEeecCCCCCCeEEEEEEEEeeCccchHhhc-CCC---CCCCCccCCccceeEEEEeCCCCCcCCC-------
Confidence            456666 6677888888899999999999998887652 211   1234567899999999999975443443       


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                                                                                                      
T Consensus        86 --------------------------------------------------------------------------------   85 (371)
T cd08281          86 --------------------------------------------------------------------------------   85 (371)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCceeecCCCcccccccccCCccccccceeec---ccC-----------------CCCccceeEEeeccceeeeCCCCC
Q psy1413         232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---ATP-----------------PDHGNLSRYYRHAADFCHKLPDHV  291 (408)
Q Consensus       232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~~  291 (408)
                       +|+|+..+..+|+.|..|++|+++.|+.....   |..                 ...|+|++|+.++++.++++|+++
T Consensus        86 -GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l  164 (371)
T cd08281          86 -GDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDV  164 (371)
T ss_pred             -CCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCC
Confidence             89998878789999999999999999875332   100                 013799999999999999999999


Q ss_pred             Ccccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413         292 SLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID  369 (408)
Q Consensus       292 ~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~  369 (408)
                      +++++++++ ...++++++ ....+++++++||.|+|++|++++|+++.+|+++|++++++++|++.++++|++++++++
T Consensus       165 ~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~  244 (371)
T cd08281         165 PLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAG  244 (371)
T ss_pred             ChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCC
Confidence            999988887 567788776 567889999999998899999999999999997799999999999999999999999987


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +    ++..+.+++++.+ ++|++|||+|...++..++
T Consensus       245 ~----~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~  277 (371)
T cd08281         245 D----PNAVEQVRELTGG-GVDYAFEMAGSVPALETAY  277 (371)
T ss_pred             c----hhHHHHHHHHhCC-CCCEEEECCCChHHHHHHH
Confidence            6    6777888888866 8999999999877666543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=99.94  E-value=1.7e-26  Score=222.62  Aligned_cols=226  Identities=19%  Similarity=0.329  Sum_probs=162.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccC---------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCL---------------   65 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~---------------   65 (408)
                      |.++|||++|++.+. |.   .+..+|.++|||++|+|+++|++|++|++||||.+.+...|..+               
T Consensus        33 v~~~gi~~~D~~~~~-g~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~  108 (358)
T TIGR03451        33 IQACGVCHTDLHYRE-GG---INDEFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTH  108 (358)
T ss_pred             EEEEeecHHHHHHhc-CC---ccccCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCcc
Confidence            468999999999884 32   23357999999999999999999999999999987543222111               


Q ss_pred             -------------------------------CcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcc
Q psy1413          66 -------------------------------SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQI  113 (408)
Q Consensus        66 -------------------------------~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~v  113 (408)
                                                     ..++..|+.+++++.+.++....+++........+ .+++++|+|+|++
T Consensus       109 ~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~v  188 (358)
T TIGR03451       109 NATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGV  188 (358)
T ss_pred             ccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHH
Confidence                                           12222333333322222222222222111111112 4789999999999


Q ss_pred             ccccccccccccC-------------------------------------------cceeEEEccCchH---HHHhhccC
Q psy1413         114 GDFRLSDPMIVGH-------------------------------------------EASGIVSKVGAKV---KHLKATRP  147 (408)
Q Consensus       114 G~~~i~~a~~~G~-------------------------------------------~~~~vv~~~g~~~---~~~~~l~~  147 (408)
                      |++++|+++.+|+                                           .++.+++++|...   ++++++++
T Consensus       189 G~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~  268 (358)
T TIGR03451       189 GDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDL  268 (358)
T ss_pred             HHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcc
Confidence            9999988887764                                           2455677777532   67899999


Q ss_pred             CcEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHc
Q psy1413         148 GGCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKT  221 (408)
Q Consensus       148 gG~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~  221 (408)
                      +|+++.+|.+..  +.+++...++++++++.+++..    ..+++++++++++|+++++++++++|||+|+.+||+.+++
T Consensus       269 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~  348 (358)
T TIGR03451       269 AGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHA  348 (358)
T ss_pred             CCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhC
Confidence            999999998754  3567777888999999998743    2678999999999999999999999999999999999988


Q ss_pred             CCCCceEEEEE
Q psy1413         222 GAGNAIKVMIH  232 (408)
Q Consensus       222 ~~~~~~kvvi~  232 (408)
                      ++.  .|+++.
T Consensus       349 ~~~--~k~~~~  357 (358)
T TIGR03451       349 GDV--LRSVVE  357 (358)
T ss_pred             CCc--ceeEEe
Confidence            753  465543

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.94  E-value=8.1e-27  Score=226.60  Aligned_cols=227  Identities=20%  Similarity=0.244  Sum_probs=156.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCccee----------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILR----------   70 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~----------   70 (408)
                      |+++|||+||++.+. |.   .+..+|+++|||++|+|+++|++|++|++||||++.+...|..|..|..          
T Consensus        40 v~a~gIcgsD~~~~~-g~---~~~~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~  115 (393)
T TIGR02819        40 VVTTNICGSDQHMVR-GR---TTAPTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVN  115 (393)
T ss_pred             EEEeeecHHHHHHHC-CC---CCCCCCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCC
Confidence            579999999999884 43   2346799999999999999999999999999998765432211111100          


Q ss_pred             -----------------c--cceeeecc----cccCCCCCCc-------ceEEEEee--------eee-cCCeEEEEccC
Q psy1413          71 -----------------R--RFSLRFRE----QKPIEDPDDH-------EVLLEMHC--------VGI-CGSDVHYLTHG  111 (408)
Q Consensus        71 -----------------~--p~~~~~~~----~~~lp~~~~~-------~~~~~~~~--------~~~-~g~~vlv~g~G  111 (408)
                                       +  .+++..++    ..++|.....       +.+.....        ..+ .+++++|.|+|
T Consensus       116 ~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G  195 (393)
T TIGR02819       116 PARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAG  195 (393)
T ss_pred             CCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence                             0  22233321    1233332111       11111110        111 47889999999


Q ss_pred             ccccccccccccccC-------------------------------------------cceeEEEccCch----------
Q psy1413         112 QIGDFRLSDPMIVGH-------------------------------------------EASGIVSKVGAK----------  138 (408)
Q Consensus       112 ~vG~~~i~~a~~~G~-------------------------------------------~~~~vv~~~g~~----------  138 (408)
                      ++|++++++++.+|+                                           .++.+++++|..          
T Consensus       196 ~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~  275 (393)
T TIGR02819       196 PVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKK  275 (393)
T ss_pred             HHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccc
Confidence            999998888776554                                           245667777753          


Q ss_pred             -------HHHHhhccCCcEEEEEccCC-C-C-----------cccCHHHHHhcCcEEEEeecCCC-cHHHHHHHHHcCCC
Q psy1413         139 -------VKHLKATRPGGCLVIVGAGS-Q-D-----------VKIPLVLTMTKEIDIRGVFRYAN-DYPIALAMVASGKV  197 (408)
Q Consensus       139 -------~~~~~~l~~gG~iv~~G~~~-~-~-----------~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~l~~~g~~  197 (408)
                             .+++++++++|+++.+|.+. . +           +++....++.+++++.+...... .+.++++++++|++
T Consensus       276 ~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i  355 (393)
T TIGR02819       276 EAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRV  355 (393)
T ss_pred             cchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCC
Confidence                   25799999999999999863 2 2           12334456678888887544433 34789999999999


Q ss_pred             CCCCcee-eeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         198 DVKKLIT-HNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       198 ~~~~~i~-~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      +++++++ |+|||+|+++||+.+.++  ..+|+++++
T Consensus       356 ~~~~~i~~~~~~l~~~~~a~~~~~~~--~~~Kvvi~~  390 (393)
T TIGR02819       356 QIAKAVNVTVISLDDAPEGYAEFDAG--AAKKFVIDP  390 (393)
T ss_pred             CHHHceecceecHHHHHHHHHHHhhC--CceEEEEeC
Confidence            9988888 789999999999999876  458998875

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=99.94  E-value=1.8e-26  Score=223.03  Aligned_cols=229  Identities=18%  Similarity=0.189  Sum_probs=166.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      |+++|||++|++.+. |.++  ...+|.++|||++|+|+++|++|++|++||||++.+..                    
T Consensus        38 V~a~gic~sD~~~~~-G~~~--~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~  114 (375)
T PLN02178         38 ILFCGVCHSDLHTIK-NHWG--FSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKV  114 (375)
T ss_pred             EEEEcCchHHHHHhc-CCCC--CCCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCc
Confidence            468999999999884 4321  13568999999999999999999999999999854311                    


Q ss_pred             ---------------------ccccCCcceeccceeeecccccCCCCCCcceEEEEee-ee-ecCCeEEEEccCcccccc
Q psy1413          61 ---------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHC-VG-ICGSDVHYLTHGQIGDFR  117 (408)
Q Consensus        61 ---------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~-~~-~~g~~vlv~g~G~vG~~~  117 (408)
                                           ...+.+.++..|+++++++.++++....+++.+.... .. ..+++++|.|+|++|+++
T Consensus       115 ~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~a  194 (375)
T PLN02178        115 VFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIA  194 (375)
T ss_pred             cccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHH
Confidence                                 1111223334455555433333333332222111000 11 247889999999999999


Q ss_pred             ccccccccCc--------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEcc
Q psy1413         118 LSDPMIVGHE--------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGA  156 (408)
Q Consensus       118 i~~a~~~G~~--------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~  156 (408)
                      +|+|+.+|+.                                      ++.+++++|..   .+++++++++|+++.+|.
T Consensus       195 vq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~  274 (375)
T PLN02178        195 VKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGL  274 (375)
T ss_pred             HHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEcc
Confidence            9988877651                                      24555666643   267899999999999998


Q ss_pred             CCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCc
Q psy1413         157 GSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDR  235 (408)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~  235 (408)
                      +..+.+++...++++++++.|++..+ ++++++++++++|++++.  + ++|||+|+++||+.+.+++. .+|+++..+.
T Consensus       275 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~-~gkvvi~~~~  350 (375)
T PLN02178        275 PEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDV-RYRFVIDVAN  350 (375)
T ss_pred             CCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCC-ceEEEEEecc
Confidence            77677788888999999999998876 789999999999999754  4 67999999999999998754 4688887644


Q ss_pred             e
Q psy1413         236 V  236 (408)
Q Consensus       236 v  236 (408)
                      .
T Consensus       351 ~  351 (375)
T PLN02178        351 S  351 (375)
T ss_pred             c
Confidence            3

>PLN02740 Alcohol dehydrogenase-like

Probab=99.93  E-value=1.2e-25  Score=218.42  Aligned_cols=245  Identities=30%  Similarity=0.430  Sum_probs=195.7

Q ss_pred             eeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          69 LRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        69 ~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      +..+. .+.+ +..++|.+.+.++++.+.++++++.++.+.- |... ....++..+|.|+.|+|..+|...+.++.   
T Consensus        16 ~~~~~~~~~~-~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~-g~~~-~~~~~p~i~GhE~~G~V~~vG~~v~~~~v---   89 (381)
T PLN02740         16 AWGPGEPLVM-EEIRVDPPQKMEVRIKILYTSICHTDLSAWK-GENE-AQRAYPRILGHEAAGIVESVGEGVEDLKA---   89 (381)
T ss_pred             EecCCCCcEE-EEeeCCCCCCCeEEEEEEEEecChhhHHHhC-CCCc-ccCCCCccccccceEEEEEeCCCCCcCCC---
Confidence            34443 3555 5577788888899999999999998876642 1111 11234667899999999999975433443   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        90 --------------------------------------------------------------------------------   89 (381)
T PLN02740         90 --------------------------------------------------------------------------------   89 (381)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeeccc-----------------------CCCCccceeEEeecccee
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCAT-----------------------PPDHGNLSRYYRHAADFC  284 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~  284 (408)
                           +|+|+..+..+|+.|.+|..++++.|++....+.                       ...+|+|++|+.++++.+
T Consensus        90 -----GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~  164 (381)
T PLN02740         90 -----GDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV  164 (381)
T ss_pred             -----CCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence                 9999999989999999999999999998653211                       012699999999999999


Q ss_pred             eeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCC
Q psy1413         285 HKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGA  362 (408)
Q Consensus       285 ~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga  362 (408)
                      +++|++++.+++++++ ...++++++ ....+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+
T Consensus       165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga  244 (381)
T PLN02740        165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI  244 (381)
T ss_pred             EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC
Confidence            9999999998888777 456777765 56789999999999999999999999999999779999999999999999999


Q ss_pred             CeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         363 DATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       363 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +.+++.++  ..+++.+.+++++.+ ++|++||++|+..+++.++
T Consensus       245 ~~~i~~~~--~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~  286 (381)
T PLN02740        245 TDFINPKD--SDKPVHERIREMTGG-GVDYSFECAGNVEVLREAF  286 (381)
T ss_pred             cEEEeccc--ccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHH
Confidence            99998764  113467778888866 8999999999887766653

>PLN02740 Alcohol dehydrogenase-like

Probab=99.93  E-value=4e-26  Score=221.72  Aligned_cols=228  Identities=21%  Similarity=0.261  Sum_probs=157.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCC--------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLS--------------   66 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~--------------   66 (408)
                      |+++|||++|++.+. |... ....+|.++|||++|+|+++|++|++|++||||++.+...|..|.              
T Consensus        42 v~~~gic~sD~~~~~-g~~~-~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~  119 (381)
T PLN02740         42 ILYTSICHTDLSAWK-GENE-AQRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYR  119 (381)
T ss_pred             EEEEecChhhHHHhC-CCCc-ccCCCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCcc
Confidence            578999999999884 3221 223579999999999999999999999999999876532221111              


Q ss_pred             -------------------------------------------cceeccceeeecccccCCCCCCcceEEEEeeeee-cC
Q psy1413          67 -------------------------------------------PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CG  102 (408)
Q Consensus        67 -------------------------------------------~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g  102 (408)
                                                                 .++..|+++++++.+.++....+++.+......+ .+
T Consensus       120 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g  199 (381)
T PLN02740        120 VDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAG  199 (381)
T ss_pred             ccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCC
Confidence                                                       1122223332222222222222222111111112 47


Q ss_pred             CeEEEEccCccccccccccccccCc--------------------------------------------ceeEEEccCch
Q psy1413         103 SDVHYLTHGQIGDFRLSDPMIVGHE--------------------------------------------ASGIVSKVGAK  138 (408)
Q Consensus       103 ~~vlv~g~G~vG~~~i~~a~~~G~~--------------------------------------------~~~vv~~~g~~  138 (408)
                      ++|+|+|+|++|++++|+++.+|+.                                            ++.+++++|..
T Consensus       200 ~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~  279 (381)
T PLN02740        200 SSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNV  279 (381)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCh
Confidence            8999999999999999988877651                                            34455566643


Q ss_pred             H---HHHhhccCC-cEEEEEccCCCCcccCHHHH-HhcCcEEEEeecCC----CcHHHHHHHHHcCCCCCCCceeeeecc
Q psy1413         139 V---KHLKATRPG-GCLVIVGAGSQDVKIPLVLT-MTKEIDIRGVFRYA----NDYPIALAMVASGKVDVKKLITHNYLL  209 (408)
Q Consensus       139 ~---~~~~~l~~g-G~iv~~G~~~~~~~~~~~~~-~~~~~~l~g~~~~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l  209 (408)
                      .   +++++++++ |+++.+|.+..+..+++... +++++++.|++...    .+++++++++.+++++++++++++|+|
T Consensus       280 ~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l  359 (381)
T PLN02740        280 EVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF  359 (381)
T ss_pred             HHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH
Confidence            2   678999997 99999998765433333222 35789999887543    468999999999999999999999999


Q ss_pred             chHHHHHHHHHcCCCCceEEEEE
Q psy1413         210 EDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       210 ~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +|+++||+.+.+++  ..|++++
T Consensus       360 ~e~~~A~~~~~~~~--~~k~~~~  380 (381)
T PLN02740        360 EKINEAFQLLEDGK--ALRCLLH  380 (381)
T ss_pred             HHHHHHHHHHHCCC--ceeEEEe
Confidence            99999999998874  3688775

>PLN02827 Alcohol dehydrogenase-like

Probab=99.93  E-value=5.5e-26  Score=220.28  Aligned_cols=225  Identities=20%  Similarity=0.224  Sum_probs=160.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCC--------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLS--------------   66 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~--------------   66 (408)
                      |.++|||++|++.+. +.   .  .+|.++|||++|+|+++|++|++|++||||+..+...|..+.              
T Consensus        44 v~~~gic~sD~~~~~-g~---~--~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~  117 (378)
T PLN02827         44 VVSTSLCRSDLSAWE-SQ---A--LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLG  117 (378)
T ss_pred             EEEEecChhHHHHhc-CC---C--CCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCcc
Confidence            468999999999874 31   1  468899999999999999999999999999976532222111              


Q ss_pred             ----------------------------------------cceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeE
Q psy1413          67 ----------------------------------------PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDV  105 (408)
Q Consensus        67 ----------------------------------------~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~v  105 (408)
                                                              .++..|+++++++.+.++....+++........ ..++++
T Consensus       118 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~V  197 (378)
T PLN02827        118 LERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSV  197 (378)
T ss_pred             ccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEE
Confidence                                                    122223333332222221111111100000111 248899


Q ss_pred             EEEccCccccccccccccccCc--------------------------------------------ceeEEEccCch---
Q psy1413         106 HYLTHGQIGDFRLSDPMIVGHE--------------------------------------------ASGIVSKVGAK---  138 (408)
Q Consensus       106 lv~g~G~vG~~~i~~a~~~G~~--------------------------------------------~~~vv~~~g~~---  138 (408)
                      +|+|+|++|++++|+++.+|+.                                            ++.+++++|..   
T Consensus       198 lV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~  277 (378)
T PLN02827        198 VIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIA  277 (378)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHH
Confidence            9999999999999888876641                                            24456666653   


Q ss_pred             HHHHhhccCC-cEEEEEccCCCCcccCH-HHHHhcCcEEEEeecCC----CcHHHHHHHHHcCCCCCCCceeeeeccchH
Q psy1413         139 VKHLKATRPG-GCLVIVGAGSQDVKIPL-VLTMTKEIDIRGVFRYA----NDYPIALAMVASGKVDVKKLITHNYLLEDT  212 (408)
Q Consensus       139 ~~~~~~l~~g-G~iv~~G~~~~~~~~~~-~~~~~~~~~l~g~~~~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~  212 (408)
                      .+++++++++ |+++.+|.+..+..++. ..++++++++.|++...    .+++++++++++|+++++++++++|+|+|+
T Consensus       278 ~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~  357 (378)
T PLN02827        278 TTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEI  357 (378)
T ss_pred             HHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHH
Confidence            2689999999 99999998765555544 36888999999987642    478999999999999998899999999999


Q ss_pred             HHHHHHHHcCCCCceEEEEEc
Q psy1413         213 LHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       213 ~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      .+||+.+.+++.  +|++|++
T Consensus       358 ~~A~~~~~~~~~--~k~vi~~  376 (378)
T PLN02827        358 NKAFELMREGKC--LRCVIHM  376 (378)
T ss_pred             HHHHHHHHCCCc--eEEEEEe
Confidence            999999998754  6888865

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=99.93  E-value=9.6e-26  Score=214.68  Aligned_cols=223  Identities=19%  Similarity=0.199  Sum_probs=161.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |+++|||++|++.+. |..+  ...+|.++|||++|+|+++|++|+++++||||++.+.                     
T Consensus        34 v~~~gi~~~D~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~  110 (329)
T TIGR02822        34 VRACGVCRTDLHVSE-GDLP--VHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPAS  110 (329)
T ss_pred             EEEEeecchhHHHHc-CCCC--CCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCc
Confidence            468999999999884 4322  1245799999999999999999999999999975431                     


Q ss_pred             -------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          60 -------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        60 -------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                   +...+...++..|+.+++++.++++....+++.+... ..+ .+++++|+|+|++|++++|+++.+|
T Consensus       111 ~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~VlV~G~g~iG~~a~~~a~~~G  189 (329)
T TIGR02822       111 RYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLPPGGRLGLYGFGGSAHLTAQVALAQG  189 (329)
T ss_pred             ccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHCC
Confidence                         1122233444556666554444455444444422111 222 4789999999999999999988877


Q ss_pred             Ccc--------------------------------eeEEEccCch---HHHHhhccCCcEEEEEccCC-CCcccCHHHHH
Q psy1413         126 HEA--------------------------------SGIVSKVGAK---VKHLKATRPGGCLVIVGAGS-QDVKIPLVLTM  169 (408)
Q Consensus       126 ~~~--------------------------------~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~  169 (408)
                      +..                                +.+++..+..   .+++++++++|+++.+|... ...+++...++
T Consensus       190 ~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~  269 (329)
T TIGR02822       190 ATVHVMTRGAAARRLALALGAASAGGAYDTPPEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHL  269 (329)
T ss_pred             CeEEEEeCChHHHHHHHHhCCceeccccccCcccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHh
Confidence            521                                1122222222   16799999999999999853 33467777888


Q ss_pred             hcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         170 TKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       170 ~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      ++++++.+++... .++.++++++++++++   +++|+|+|+|+++||+.+.+++. .+|+++
T Consensus       270 ~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~-~Gkvvl  328 (329)
T TIGR02822       270 FYERQIRSVTSNTRADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRF-DGAAVL  328 (329)
T ss_pred             hCCcEEEEeecCCHHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCC-ceEEEe
Confidence            9999999998765 7889999999999985   47899999999999999998754 566665

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.93  E-value=3.9e-25  Score=213.83  Aligned_cols=238  Identities=30%  Similarity=0.444  Sum_probs=192.3

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ +..+.|.+.+.++++.+.++++++.++.+.. |...  ....+..+|.|+.|+|+.+|+..+.++.         
T Consensus        13 ~l~~-~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~-g~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~~~---------   79 (368)
T TIGR02818        13 PLKI-EEVDVEMPQKGEVLVRIVATGVCHTDAFTLS-GADP--EGVFPVILGHEGAGIVEAVGEGVTSVKV---------   79 (368)
T ss_pred             CeEE-EEecCCCCCCCeEEEEEEEecccHHHHHHhc-CCCC--CCCCCeeeccccEEEEEEECCCCccCCC---------
Confidence            4555 5567788888899999999999988876542 2111  1235678899999999999976444444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        80 -------------------------------------------------------------------------------G   80 (368)
T TIGR02818        80 -------------------------------------------------------------------------------G   80 (368)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           9


Q ss_pred             CceeecCCCcccccccccCCccccccceee---cccC-----------------CCCccceeEEeeccceeeeCCCCCCc
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFF---CATP-----------------PDHGNLSRYYRHAADFCHKLPDHVSL  293 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~~~~  293 (408)
                      |+|...+..+|+.|..|..+.++.|.+...   +|..                 ..+|+|++|+.++++.++++|+++++
T Consensus        81 drV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~  160 (368)
T TIGR02818        81 DHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL  160 (368)
T ss_pred             CEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence            999988888999999999999999986421   1110                 01479999999999999999999999


Q ss_pred             ccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCC
Q psy1413         294 EEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRN  371 (408)
Q Consensus       294 ~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~  371 (408)
                      +++++++ +..++++++ +...+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++.++++++ 
T Consensus       161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-  239 (368)
T TIGR02818       161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND-  239 (368)
T ss_pred             HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-
Confidence            9988887 667788887 5678899999999988999999999999999977999999999999999999999998763 


Q ss_pred             CChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         372 HSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                       ..+++.+.+++++.+ ++|++|||+|+..++..+
T Consensus       240 -~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~  272 (368)
T TIGR02818       240 -YDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAA  272 (368)
T ss_pred             -cchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHH
Confidence             124567778888865 899999999987666544

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=99.93  E-value=2.9e-25  Score=214.05  Aligned_cols=236  Identities=30%  Similarity=0.460  Sum_probs=192.1

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ ++.++|.+.+..+++.+..+++++.++.+.- |..   ...++..+|.++.|++..+|+....++.          
T Consensus        14 ~~~-~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~-g~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~----------   78 (358)
T TIGR03451        14 VEL-ETIVVPDPGPGEVIVDIQACGVCHTDLHYRE-GGI---NDEFPFLLGHEAAGVVEAVGEGVTDVAP----------   78 (358)
T ss_pred             CEE-EEEECCCCCCCeEEEEEEEEeecHHHHHHhc-CCc---cccCCcccccceEEEEEEeCCCCcccCC----------
Confidence            455 5677888888899999999999988776542 211   1234567899999999999975444444          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    +|
T Consensus        79 ------------------------------------------------------------------------------Gd   80 (358)
T TIGR03451        79 ------------------------------------------------------------------------------GD   80 (358)
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          99


Q ss_pred             ceeecCCCcccccccccCCccccccceeec--------ccC----CCCccceeEEeeccceeeeCCCCCCcccccccc-h
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFC--------ATP----PDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-P  301 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~----~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~  301 (408)
                      +|...+..+|+.|..|..+++++|.+....        |..    ..+|+|++|+.++++.++++|++++++++++++ .
T Consensus        81 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~  160 (358)
T TIGR03451        81 YVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCG  160 (358)
T ss_pred             EEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhccc
Confidence            999988899999999999999999753111        110    136999999999999999999999998888777 4


Q ss_pred             hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHH
Q psy1413         302 LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTH  380 (408)
Q Consensus       302 ~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~  380 (408)
                      ..++++++ +...+++++++||+|+|++|+.++|+++.+|+++|++++++++|++.++++|++.++++++    ++..+.
T Consensus       161 ~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~----~~~~~~  236 (358)
T TIGR03451       161 VMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG----TDPVEA  236 (358)
T ss_pred             chhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC----cCHHHH
Confidence            55566665 5677899999999988999999999999999988999999999999999999999999876    667778


Q ss_pred             HHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         381 IIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       381 ~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      ++++++++++|++|||+|++.+++.++
T Consensus       237 i~~~~~~~g~d~vid~~g~~~~~~~~~  263 (358)
T TIGR03451       237 IRALTGGFGADVVIDAVGRPETYKQAF  263 (358)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHH
Confidence            888888789999999999877766553

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.93  E-value=2.8e-25  Score=206.88  Aligned_cols=169  Identities=25%  Similarity=0.343  Sum_probs=144.9

Q ss_pred             cCceeecCCCcccccccccCCccccccceeecccC------CCCccceeEEeeccc-eeeeCCCCCCcccccccc-hhhh
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATP------PDHGNLSRYYRHAAD-FCHKLPDHVSLEEGALLE-PLSV  304 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~~-~~~~  304 (408)
                      +|+|++.+..+|+.|.+|+.|+++.|++..++|..      ..+|+|++|+.++++ .++++|++++++.+++++ ...+
T Consensus        29 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~t  108 (280)
T TIGR03366        29 GQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATAT  108 (280)
T ss_pred             CCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHH
Confidence            99999999999999999999999999987666532      247999999999998 699999999998888877 4567


Q ss_pred             hhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413         305 GVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       305 ~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      +++++++....+++++||+|+|++|++++|+++.+|+++|++++++++|++.++++|++.+++..+      ..+.++++
T Consensus       109 a~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~------~~~~~~~~  182 (280)
T TIGR03366       109 VMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV------LAERQGGL  182 (280)
T ss_pred             HHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchh------hHHHHHHH
Confidence            788887666779999999988999999999999999988888889999999999999999988643      24556677


Q ss_pred             hcCCCCceEEEcccchhhhhhcC
Q psy1413         385 LQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       385 ~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +.++++|++||++|...+++.++
T Consensus       183 ~~~~g~d~vid~~G~~~~~~~~~  205 (280)
T TIGR03366       183 QNGRGVDVALEFSGATAAVRACL  205 (280)
T ss_pred             hCCCCCCEEEECCCChHHHHHHH
Confidence            77789999999999887766543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.93  E-value=3.7e-25  Score=215.03  Aligned_cols=236  Identities=28%  Similarity=0.477  Sum_probs=185.1

Q ss_pred             ceeccceeeecccccCCCCC-------CcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHH
Q psy1413          68 ILRRRFSLRFREQKPIEDPD-------DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK  140 (408)
Q Consensus        68 ~~~~p~~~~~~~~~~lp~~~-------~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~  140 (408)
                      ++..|..+.. ++.++|.+.       +.++++.+.++++|+.++.++. |.   .....+..+|+|+.|+|..+|+..+
T Consensus         7 v~~~~~~~~~-~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~-g~---~~~~~p~i~GhE~~G~V~~vG~~V~   81 (393)
T TIGR02819         7 VYLGPGKVEV-QDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVR-GR---TTAPTGLVLGHEITGEVIEKGRDVE   81 (393)
T ss_pred             EEecCCceeE-EeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHC-CC---CCCCCCccccceeEEEEEEEcCccc
Confidence            4455666666 566777653       4788999999999998877653 21   1224567889999999999997655


Q ss_pred             HHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHH
Q psy1413         141 HLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAK  220 (408)
Q Consensus       141 ~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~  220 (408)
                      .++.                                                                            
T Consensus        82 ~~~v----------------------------------------------------------------------------   85 (393)
T TIGR02819        82 FIKI----------------------------------------------------------------------------   85 (393)
T ss_pred             cccC----------------------------------------------------------------------------
Confidence            4554                                                                            


Q ss_pred             cCCCCceEEEEEcCceeecCCCcccccccccCCcccccccee------ecccC---CCCccceeEEeeccc--eeeeCCC
Q psy1413         221 TGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIF------FCATP---PDHGNLSRYYRHAAD--FCHKLPD  289 (408)
Q Consensus       221 ~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~g~~~~~~~~~~~--~~~~~p~  289 (408)
                                  +|+|.+.+..+|+.|.+|..|++++|.+..      ++|..   ..+|+|++|+.++..  .++++|+
T Consensus        86 ------------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~  153 (393)
T TIGR02819        86 ------------GDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPD  153 (393)
T ss_pred             ------------CCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCC
Confidence                        999999999999999999999999999742      23321   246999999999964  6999999


Q ss_pred             CCCc----cc-ccccchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCe
Q psy1413         290 HVSL----EE-GALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADA  364 (408)
Q Consensus       290 ~~~~----~~-aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~  364 (408)
                      +++.    .. +++..++.++++++.+..+++++++||.|+|++|+.++|+++.+|++.+++++++++|++.++++|++.
T Consensus       154 ~~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~  233 (393)
T TIGR02819       154 RDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET  233 (393)
T ss_pred             cccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE
Confidence            8753    22 334447788898887788899999999777999999999999999997776778889999999999985


Q ss_pred             EEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         365 TVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       365 ~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                       ++...   ..+..+.+.+++.++++|++|||+|.+
T Consensus       234 -v~~~~---~~~~~~~v~~~~~~~g~Dvvid~~G~~  265 (393)
T TIGR02819       234 -VDLSK---DATLPEQIEQILGEPEVDCAVDCVGFE  265 (393)
T ss_pred             -EecCC---cccHHHHHHHHcCCCCCcEEEECCCCc
Confidence             44432   145667788888778999999999986

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>KOG1202|consensus

Probab=99.93  E-value=5.6e-25  Score=221.02  Aligned_cols=324  Identities=15%  Similarity=0.128  Sum_probs=249.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCC-----CCCccccCCccEEEEEeCCCCCCCCCCCEEEE------ccCcccccCCcce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRL-----SDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF------VPEFRNVCLSPIL   69 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~-----~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~------~~~~~~~~~~~~~   69 (408)
                      |.+..||..|+.+. .|..+.-..     .--.++|-||+|+=.          -|.||..      .++.+....+..|
T Consensus      1451 VYYAplNFRDiMLa-sGkL~~DAiPG~~a~qdclLGmEFsGRd~----------~GrRvM~mvpAksLATt~l~~rd~lW 1519 (2376)
T KOG1202|consen 1451 VYYAPLNFRDIMLA-SGKLSPDAIPGDLASQDCLLGMEFSGRDA----------SGRRVMGMVPAKSLATTVLASRDFLW 1519 (2376)
T ss_pred             EEeccccHHHHHHh-cCCCCcccCCCccchhhheeceeeccccC----------CCcEEEEeeehhhhhhhhhcchhhhh
Confidence            34677899999877 444322111     124678999998533          3888863      2244567778899


Q ss_pred             eccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEE-ccCccccccccccccccCcceeEEEccCchH--------
Q psy1413          70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYL-THGQIGDFRLSDPMIVGHEASGIVSKVGAKV--------  139 (408)
Q Consensus        70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~-g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~--------  139 (408)
                      ..|.+++++++.++|..+.+++++.+....+ +|++++|+ |+|++|+++|.+|.+.|+.   ++.++|+.+        
T Consensus      1520 evP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~---VFTTVGSaEKRefL~~r 1596 (2376)
T KOG1202|consen 1520 EVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCT---VFTTVGSAEKREFLLKR 1596 (2376)
T ss_pred             hCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCE---EEEecCcHHHHHHHHHh
Confidence            9999999999999999999999877665555 58899996 5999999999999999997   777777664        


Q ss_pred             -------------------------------------------HHHhhccCCcEEEEEccCCCCcccCHH-HHHhcCcEE
Q psy1413         140 -------------------------------------------KHLKATRPGGCLVIVGAGSQDVKIPLV-LTMTKEIDI  175 (408)
Q Consensus       140 -------------------------------------------~~~~~l~~gG~iv~~G~~~~~~~~~~~-~~~~~~~~l  175 (408)
                                                                 .+++||+..||+..+|-..-.-+-++. ..++||.++
T Consensus      1597 FPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsf 1676 (2376)
T KOG1202|consen 1597 FPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSF 1676 (2376)
T ss_pred             chhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccce
Confidence                                                       469999999999999966544444443 567899999


Q ss_pred             EEeecC-----C-CcHHHHHHHHHcCCCC--CCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceeecCCCccccc
Q psy1413         176 RGVFRY-----A-NDYPIALAMVASGKVD--VKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTC  247 (408)
Q Consensus       176 ~g~~~~-----~-~~~~~~~~l~~~g~~~--~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~~~~~~~~~~  247 (408)
                      +|....     . +++.++..++++|.-+  +.|+.+++|+=.++++||+.|.+++ +.+||+++.+.-           
T Consensus      1677 HGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGK-HIGKVvikvr~e----------- 1744 (2376)
T KOG1202|consen 1677 HGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGK-HIGKVVIKVRAE----------- 1744 (2376)
T ss_pred             eeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccC-ccceEEEEEccc-----------
Confidence            998633     2 5689999999998754  7889999999999999999999975 456666653210           


Q ss_pred             ccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCcCCCCEEEEEec-c
Q psy1413         248 TYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGA-G  326 (408)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~-G  326 (408)
                                                                 ..   +-..++-.....++.+..+.|..+|+|+|+ |
T Consensus      1745 -------------------------------------------E~---~k~~~pk~r~i~AI~rt~~hpeksYii~GGLG 1778 (2376)
T KOG1202|consen 1745 -------------------------------------------EP---AKAKGPKPRLISAIPRTYCHPEKSYIIVGGLG 1778 (2376)
T ss_pred             -------------------------------------------cc---ccccCCchhhHhhcchhhcCccceEEEecccc
Confidence                                                       00   001112223344556667899999999999 9


Q ss_pred             hhHHHHHHHHHHhCCCeEEEEecChhhH-------HHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         327 PIGLVTLLTARALGASRVVITDILEHKL-------KTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       327 ~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-------~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      |+|+.++||+..+|+|.+++++|++-|-       +.+++.|....++..+.++.+++++.+.+.+.-..+..|||-
T Consensus      1779 GFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~vGGiFnL 1855 (2376)
T KOG1202|consen 1779 GFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGPVGGIFNL 1855 (2376)
T ss_pred             chhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcccccchhhH
Confidence            9999999999999999999999997663       457788999999999998999999999998876677777763

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.93  E-value=1.4e-25  Score=216.94  Aligned_cols=226  Identities=20%  Similarity=0.252  Sum_probs=156.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccccc----------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC----------------   64 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~----------------   64 (408)
                      |+++|||++|++.+. |..+  ...+|.++|||++|+|+++|++|++|++||||++.+...|..                
T Consensus        33 v~a~gi~~sD~~~~~-g~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~  109 (368)
T TIGR02818        33 IVATGVCHTDAFTLS-GADP--EGVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVR  109 (368)
T ss_pred             EEEecccHHHHHHhc-CCCC--CCCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcc
Confidence            468999999999884 3322  235799999999999999999999999999998755322111                


Q ss_pred             --------------------------------------CCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeE
Q psy1413          65 --------------------------------------LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDV  105 (408)
Q Consensus        65 --------------------------------------~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~v  105 (408)
                                                            ...++..|+++++++.+.++.+..+++.+...... ..++++
T Consensus       110 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~V  189 (368)
T TIGR02818       110 ETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTV  189 (368)
T ss_pred             cccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEE
Confidence                                                  11223334444443333333232222211111111 247899


Q ss_pred             EEEccCccccccccccccccC-c-------------------------------------------ceeEEEccCch---
Q psy1413         106 HYLTHGQIGDFRLSDPMIVGH-E-------------------------------------------ASGIVSKVGAK---  138 (408)
Q Consensus       106 lv~g~G~vG~~~i~~a~~~G~-~-------------------------------------------~~~vv~~~g~~---  138 (408)
                      +|+|+|++|++++|+|+.+|+ .                                           ++.+++++|..   
T Consensus       190 lV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~  269 (368)
T TIGR02818       190 AVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVM  269 (368)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHH
Confidence            999999999999998887775 1                                           23455555532   


Q ss_pred             HHHHhhccCC-cEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413         139 VKHLKATRPG-GCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLED  211 (408)
Q Consensus       139 ~~~~~~l~~g-G~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~  211 (408)
                      .+++++++++ |+++.+|.+..  +.+++...++. +..+.+++..    ..+++++++++++++++++++++|+|||+|
T Consensus       270 ~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~  348 (368)
T TIGR02818       270 RAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLED  348 (368)
T ss_pred             HHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHH
Confidence            2678999886 99999998643  34444444443 4457777643    257899999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCceEEEEE
Q psy1413         212 TLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       212 ~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +++||+.+.+++  ..|+++.
T Consensus       349 ~~~A~~~~~~~~--~~k~~v~  367 (368)
T TIGR02818       349 INEAFDLMHEGK--SIRTVIH  367 (368)
T ss_pred             HHHHHHHHhCCC--ceeEEee
Confidence            999999998764  4688775

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=99.93  E-value=2.6e-25  Score=214.27  Aligned_cols=228  Identities=21%  Similarity=0.207  Sum_probs=157.7

Q ss_pred             CCeeeecccchhhhhcCCCCCC-CCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcceec--------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDF-RLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRR--------   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~-~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~--------   71 (408)
                      |+++|||++|++.+. |..+.. ...+|.++|||++|+|+++|++ +.|++||||+..+...|..+..|..+        
T Consensus        32 v~a~gi~~~D~~~~~-g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~  109 (355)
T cd08230          32 TLEVGVCGTDREIVA-GEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETG  109 (355)
T ss_pred             EEEEEeccccHHHHc-CCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCc
Confidence            579999999999884 432222 1246899999999999999999 99999999987653322111111100        


Q ss_pred             --------------cceeeec--ccccCCCCCCcce-EEEEee---------------e-eecCCeEEEEccCccccccc
Q psy1413          72 --------------RFSLRFR--EQKPIEDPDDHEV-LLEMHC---------------V-GICGSDVHYLTHGQIGDFRL  118 (408)
Q Consensus        72 --------------p~~~~~~--~~~~lp~~~~~~~-~~~~~~---------------~-~~~g~~vlv~g~G~vG~~~i  118 (408)
                                    .+++..+  ...++|...+.+. +.....               . ...+++++|.|+|++|++++
T Consensus       110 ~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~  189 (355)
T cd08230         110 EYTERGIKGLHGFMREYFVDDPEYLVKVPPSLADVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAA  189 (355)
T ss_pred             ceeccCcCCCCccceeEEEeccccEEECCCCCCcceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHH
Confidence                          0111111  1122332222110 110000               0 12578999999999999999


Q ss_pred             cccccccCc----------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEc
Q psy1413         119 SDPMIVGHE----------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVG  155 (408)
Q Consensus       119 ~~a~~~G~~----------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G  155 (408)
                      |+++.+|+.                                        ++.+++++|...   +++++++++|+++.+|
T Consensus       190 q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G  269 (355)
T cd08230         190 LLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFG  269 (355)
T ss_pred             HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEe
Confidence            888776641                                        355666676532   6899999999999999


Q ss_pred             cCCC--CcccC----HHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCC----CCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         156 AGSQ--DVKIP----LVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKV----DVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       156 ~~~~--~~~~~----~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~----~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                      .+..  ..+++    ...+++|++++.|++..+ ++++++++++.++++    +++++++++|+|+|+.+||+.+.++  
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~--  347 (355)
T cd08230         270 VPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDG--  347 (355)
T ss_pred             cCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccC--
Confidence            7665  45565    356788999999998766 789999999998873    4678899999999999999988654  


Q ss_pred             CceEEEEEc
Q psy1413         225 NAIKVMIHC  233 (408)
Q Consensus       225 ~~~kvvi~~  233 (408)
                       ..|+++++
T Consensus       348 -~~K~v~~~  355 (355)
T cd08230         348 -EIKVVIEW  355 (355)
T ss_pred             -CeEEEeeC
Confidence             25888764

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.92  E-value=2.1e-24  Score=208.82  Aligned_cols=239  Identities=30%  Similarity=0.451  Sum_probs=192.0

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV  152 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv  152 (408)
                      +.+.+ ++.+.|.+.+.++++.+.++++++.++.+.. |...  ...++..+|.|+.|+|..+|...+.++.        
T Consensus        13 ~~~~~-~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~-g~~~--~~~~p~v~G~E~~G~V~~vG~~v~~~~v--------   80 (368)
T cd08300          13 KPLSI-EEVEVAPPKAGEVRIKILATGVCHTDAYTLS-GADP--EGLFPVILGHEGAGIVESVGEGVTSVKP--------   80 (368)
T ss_pred             CCcEE-EEeecCCCCCCEEEEEEEEEEechhhHHHhc-CCCc--cCCCCceeccceeEEEEEeCCCCccCCC--------
Confidence            34556 5567788888899999999999988876642 2111  1245667899999999999975444444        


Q ss_pred             EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                                                                                                      
T Consensus        81 --------------------------------------------------------------------------------   80 (368)
T cd08300          81 --------------------------------------------------------------------------------   80 (368)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCceeecCCCcccccccccCCccccccceeec---ccC-----------------CCCccceeEEeeccceeeeCCCCCC
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---ATP-----------------PDHGNLSRYYRHAADFCHKLPDHVS  292 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~~~  292 (408)
                      +|+|+..+..+|++|.+|.+++++.|++....   |..                 ...|+|++|+.++++.++++|++++
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~  160 (368)
T cd08300          81 GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP  160 (368)
T ss_pred             CCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence            89998888889999999999999999864311   100                 0247999999999999999999999


Q ss_pred             cccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       293 ~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      +++++.++ ...++++++ ....+++++++||+|+|++|+.++|+++.+|+++|++++++++|++.++++|+++++++++
T Consensus       161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~  240 (368)
T cd08300         161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD  240 (368)
T ss_pred             hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            98888877 567788876 5578899999999988999999999999999977999999999999999999999998765


Q ss_pred             CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      .  .+++.+.+++++++ ++|++|||+|+...++.+
T Consensus       241 ~--~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a  273 (368)
T cd08300         241 H--DKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAA  273 (368)
T ss_pred             c--chHHHHHHHHHhCC-CCcEEEECCCChHHHHHH
Confidence            1  13577888888875 899999999987665544

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02827 Alcohol dehydrogenase-like

Probab=99.92  E-value=2.3e-24  Score=208.97  Aligned_cols=243  Identities=26%  Similarity=0.381  Sum_probs=191.8

Q ss_pred             cceeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhc
Q psy1413          67 PILRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKAT  145 (408)
Q Consensus        67 ~~~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l  145 (408)
                      .++..+. .+.. ++.++|.+.+.++++.+.++++++.++.+.....      .....+|.|+.|+|..+|+....++. 
T Consensus        16 ~~~~~~~~~~~~-~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~------~~p~i~GhE~~G~V~~vG~~v~~~~~-   87 (378)
T PLN02827         16 AVAWGAGEALVM-EEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA------LFPRIFGHEASGIVESIGEGVTEFEK-   87 (378)
T ss_pred             EEEecCCCCceE-EEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC------CCCeeecccceEEEEEcCCCCcccCC-
Confidence            3344433 4666 5678888888999999999999998876642110      23456899999999999975444444 


Q ss_pred             cCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCC
Q psy1413         146 RPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGN  225 (408)
Q Consensus       146 ~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~  225 (408)
                                                                                                      
T Consensus        88 --------------------------------------------------------------------------------   87 (378)
T PLN02827         88 --------------------------------------------------------------------------------   87 (378)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceEEEEEcCceeecCCCcccccccccCCccccccceeec----------------ccCC----CCccceeEEeeccceee
Q psy1413         226 AIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC----------------ATPP----DHGNLSRYYRHAADFCH  285 (408)
Q Consensus       226 ~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~----~~g~~~~~~~~~~~~~~  285 (408)
                             +|+|...+..+|+.|.+|..|+++.|++....                |...    .+|+|++|+.++++.++
T Consensus        88 -------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~  160 (378)
T PLN02827         88 -------GDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV  160 (378)
T ss_pred             -------CCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheE
Confidence                   89999888889999999999999999874211                1100    24899999999999999


Q ss_pred             eCCCCCCcccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCC
Q psy1413         286 KLPDHVSLEEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGAD  363 (408)
Q Consensus       286 ~~p~~~~~~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~  363 (408)
                      ++|+++++++++++++ +.++++++ ....+++++++||+|+|++|+.++|+++.+|++.|++++++++|.+.++++|++
T Consensus       161 ~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~  240 (378)
T PLN02827        161 KVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVT  240 (378)
T ss_pred             ECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc
Confidence            9999999988887764 45566655 456789999999998899999999999999998788888899999999999999


Q ss_pred             eEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         364 ATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       364 ~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      .++++++  ..+++.+.+++++.+ ++|++|||+|....++.++
T Consensus       241 ~~i~~~~--~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l  281 (378)
T PLN02827        241 DFINPND--LSEPIQQVIKRMTGG-GADYSFECVGDTGIATTAL  281 (378)
T ss_pred             EEEcccc--cchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHH
Confidence            9998764  114677788888865 8999999999876665543

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=99.92  E-value=1.6e-24  Score=204.41  Aligned_cols=211  Identities=32%  Similarity=0.396  Sum_probs=176.4

Q ss_pred             ccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcE
Q psy1413          71 RRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGC  150 (408)
Q Consensus        71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~  150 (408)
                      .|+.+.+ ++.+.|.+...++++++.+++++..++++....  .....+++...|.|+.|+|+.+|+..+.++.      
T Consensus        11 ~~~~l~~-~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~--~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~------   81 (326)
T COG0604          11 GPEVLKV-VEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGL--APPVRPLPFIPGSEAAGVVVAVGSGVTGFKV------   81 (326)
T ss_pred             CCceeEE-EecCCCCCCCCeEEEEEEEeecChHHHHhccCC--CCCCCCCCCcccceeEEEEEEeCCCCCCcCC------
Confidence            4556777 788889999999999999999998888775311  2223457889999999999999976554443      


Q ss_pred             EEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         151 LVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       151 iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                                                                                                      
T Consensus        82 --------------------------------------------------------------------------------   81 (326)
T COG0604          82 --------------------------------------------------------------------------------   81 (326)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEcCceeecCCCcccccccccCCccccccceeecccCC-CCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhh
Q psy1413         231 IHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPP-DHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHA  308 (408)
Q Consensus       231 i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~  308 (408)
                        +|+|...+                          .. ..|+|+||..++++.+.++|+++++++||.++ ...|+|++
T Consensus        82 --GdrV~~~~--------------------------~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~  133 (326)
T COG0604          82 --GDRVAALG--------------------------GVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLA  133 (326)
T ss_pred             --CCEEEEcc--------------------------CCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence              88886532                          01 47999999999999999999999999999888 67778888


Q ss_pred             h-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         309 C-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       309 ~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      + +...+++++++||+|+ |++|+.++|+++++|++ ++++.++++|.++++++||++++++++    +++.+.+++++.
T Consensus       134 l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~-~v~~~~s~~k~~~~~~lGAd~vi~y~~----~~~~~~v~~~t~  208 (326)
T COG0604         134 LFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGAT-VVAVVSSSEKLELLKELGADHVINYRE----EDFVEQVRELTG  208 (326)
T ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCc-EEEEecCHHHHHHHHhcCCCEEEcCCc----ccHHHHHHHHcC
Confidence            8 5588999999999998 99999999999999995 666667777777999999999999988    789999999999


Q ss_pred             CCCCceEEEcccchhhh
Q psy1413         387 GEQPDKTIDCSGIESTI  403 (408)
Q Consensus       387 ~~~~d~i~d~~g~~~~~  403 (408)
                      ++++|+|||++|+....
T Consensus       209 g~gvDvv~D~vG~~~~~  225 (326)
T COG0604         209 GKGVDVVLDTVGGDTFA  225 (326)
T ss_pred             CCCceEEEECCCHHHHH
Confidence            99999999999977543

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=99.92  E-value=4e-25  Score=212.88  Aligned_cols=227  Identities=18%  Similarity=0.206  Sum_probs=165.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      |.++|||++|++.+. |.++  ...+|.++|||++|+|+++|++|+.|++||||++.+..                    
T Consensus        41 v~a~gi~~~D~~~~~-g~~~--~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~  117 (357)
T PLN02514         41 VIYCGICHTDLHQIK-NDLG--MSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKR  117 (357)
T ss_pred             EEEeccChHHHHhhc-CCcC--cCCCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCc
Confidence            468999999999884 4322  22568999999999999999999999999999753210                    


Q ss_pred             ---------------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccc
Q psy1413          61 ---------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRL  118 (408)
Q Consensus        61 ---------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i  118 (408)
                                           ...+...++..|+++++++.++++....+++.+...... ..+++++|+|+|++|++++
T Consensus       118 ~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av  197 (357)
T PLN02514        118 IWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGV  197 (357)
T ss_pred             cccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHH
Confidence                                 111122334445555554444444443333321111111 2578899999999999999


Q ss_pred             cccccccCc--------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccC
Q psy1413         119 SDPMIVGHE--------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAG  157 (408)
Q Consensus       119 ~~a~~~G~~--------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~  157 (408)
                      ++++.+|+.                                      ++.+++++|..   .+++++++++|+++.+|.+
T Consensus       198 ~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~  277 (357)
T PLN02514        198 KIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVI  277 (357)
T ss_pred             HHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence            888776641                                      34566666643   2689999999999999987


Q ss_pred             CCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         158 SQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       158 ~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ..+.+++...++++++++.|++... .+++++++++++|+++  +++ ++|||+|+.+||+.+.+++. .+|+++..+
T Consensus       278 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~-~gk~v~~~~  351 (357)
T PLN02514        278 NTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDV-RYRFVVDVA  351 (357)
T ss_pred             CCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCC-ceeEEEEcc
Confidence            6667788888999999999998877 6899999999999864  455 58999999999999998764 467777653

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=99.92  E-value=2.1e-25  Score=210.43  Aligned_cols=228  Identities=25%  Similarity=0.293  Sum_probs=184.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCcceec
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILRR   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~~   71 (408)
                      |+|+|||+.|+..++ |. .....++|+|||.|++|+|+++|++|+.|++||||+...         ++...+.+.+...
T Consensus        34 V~a~gvN~~D~~~r~-G~-~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~  111 (326)
T COG0604          34 VKAAGVNPIDVLVRQ-GL-APPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPL  111 (326)
T ss_pred             EEEeecChHHHHhcc-CC-CCCCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeC
Confidence            579999999999985 43 223446899999999999999999999999999999873         3346777788899


Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeeec-CCeEEEEc-cCccccccccccccccC-----------------------
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGIC-GSDVHYLT-HGQIGDFRLSDPMIVGH-----------------------  126 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~-g~~vlv~g-~G~vG~~~i~~a~~~G~-----------------------  126 (408)
                      |+++++++++.+|..+.+++.+......+. +++|||+| +|+||.+++|+|+.+|+                       
T Consensus       112 P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~v  191 (326)
T COG0604         112 PDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHV  191 (326)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEE
Confidence            999999999999998888875544434343 89999987 89999999999999983                       


Q ss_pred             -------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCC--CCcccCHHHHHhcCcEEEEeecCC-
Q psy1413         127 -------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGS--QDVKIPLVLTMTKEIDIRGVFRYA-  182 (408)
Q Consensus       127 -------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l~g~~~~~-  182 (408)
                                         .++.+++++|...  +++++|+++|+++.+|...  ....++...+..+.+.+.+..... 
T Consensus       192 i~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~  271 (326)
T COG0604         192 INYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR  271 (326)
T ss_pred             EcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec
Confidence                               3677888888664  6899999999999999776  456677788889999999987553 


Q ss_pred             ------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         183 ------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       183 ------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                            +.++++.+++++|++++  .++++|||+|..++..+...++...+|++++
T Consensus       272 ~~~~~~~~~~~l~~~~~~g~l~~--~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~  325 (326)
T COG0604         272 DPEALAEALAELFDLLASGKLKP--VIDRVYPLAEAPAAAAHLLLERRTTGKVVLK  325 (326)
T ss_pred             chHHHHHHHHHHHHHHHcCCCcc--eeccEechhhhHHHHHHHHcccCCcceEEEe
Confidence                  35777999999999964  5789999999777776655555567888775

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.92  E-value=3.8e-25  Score=212.48  Aligned_cols=226  Identities=21%  Similarity=0.325  Sum_probs=160.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccc-----------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNV-----------------   63 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~-----------------   63 (408)
                      |+++|||++|++.+..+  +.  ..+|.++|||++|+|+++|++|++|++||||++.+...+.                 
T Consensus        32 v~~~gi~~~D~~~~~~~--~~--~~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~  107 (347)
T PRK10309         32 VASSGLCGSDIPRIFKN--GA--HYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYD  107 (347)
T ss_pred             EEEEEEchhcHHHHhCC--CC--CCCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcc
Confidence            46899999999864222  11  1358899999999999999999999999999976532221                 


Q ss_pred             ----------------cCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccccC
Q psy1413          64 ----------------CLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        64 ----------------~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                                      +...++..|+.+++++.+.+ .+...++.+ ..... ..+++++|.|+|++|++++|+++.+|+
T Consensus       108 ~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~-~~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~  185 (347)
T PRK10309        108 FIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFI-EPITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGA  185 (347)
T ss_pred             eeccCCCCccceeEEeehHHeEECcCCCCHHHhhhh-hHHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                            11222333444444222221 111111100 00111 147899999999999999888876664


Q ss_pred             ------------------------------------------cce-eEEEccCch---HHHHhhccCCcEEEEEccCCCC
Q psy1413         127 ------------------------------------------EAS-GIVSKVGAK---VKHLKATRPGGCLVIVGAGSQD  160 (408)
Q Consensus       127 ------------------------------------------~~~-~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~  160 (408)
                                                                .++ .+++++|..   .+++++++++|+++.+|....+
T Consensus       186 ~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~  265 (347)
T PRK10309        186 KSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD  265 (347)
T ss_pred             CeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC
Confidence                                                      123 567777754   2689999999999999987655


Q ss_pred             cccC---HHHHHhcCcEEEEeecC------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         161 VKIP---LVLTMTKEIDIRGVFRY------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       161 ~~~~---~~~~~~~~~~l~g~~~~------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      .+++   +..+++|++++.|++..      .++++++++++++|+++++++++|+|+|+|+++||+.+.+++ ..+|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~gKvvv  344 (347)
T PRK10309        266 LHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNP-MPGKVLL  344 (347)
T ss_pred             cccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCC-cceEEEE
Confidence            4443   34678899999998753      256899999999999999999999999999999999998875 4578877


Q ss_pred             Ec
Q psy1413         232 HC  233 (408)
Q Consensus       232 ~~  233 (408)
                      +.
T Consensus       345 ~~  346 (347)
T PRK10309        345 QI  346 (347)
T ss_pred             eC
Confidence            53

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=99.92  E-value=3.5e-24  Score=205.86  Aligned_cols=243  Identities=26%  Similarity=0.391  Sum_probs=195.9

Q ss_pred             eeccce-eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          69 LRRRFS-LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        69 ~~~p~~-~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      +..+.. +.+ ++.+.|.+.+.++++++..+++++.++..+-.|..  .....+..+|+|+.|+|..+|.....+ .   
T Consensus         4 ~~~~g~~~~~-~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~-~---   76 (349)
T TIGR03201         4 MTEPGKPMVK-TRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR--TNHALPLALGHEISGRVIQAGAGAASW-I---   76 (349)
T ss_pred             EecCCCCceE-EeccCCCCCCCeEEEEEEEEeecccchHHHcCCCC--ccCCCCeeccccceEEEEEeCCCcCCC-C---
Confidence            334443 566 56778888888999999999999888765421210  012335568999999999999642211 2   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        77 --------------------------------------------------------------------------------   76 (349)
T TIGR03201        77 --------------------------------------------------------------------------------   76 (349)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCC------CCCcccccccc-
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPD------HVSLEEGALLE-  300 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~~~-  300 (408)
                           +++|+..+..+|++|..|.+++++.|.+....|.. .+|+|++|+.++++.++++|+      +++.+.++.+. 
T Consensus        77 -----GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~-~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~  150 (349)
T TIGR03201        77 -----GKAVIVPAVIPCGECELCKTGRGTICRAQKMPGND-MQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVAD  150 (349)
T ss_pred             -----CCEEEECCCCCCCCChhhhCcCcccCCCCCccCcC-CCCcccceEEechHHeEECCcccccccCCCHHHhhhhcc
Confidence                 89999999999999999999999999886665543 469999999999999999999      78887777665 


Q ss_pred             hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHH
Q psy1413         301 PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTH  380 (408)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~  380 (408)
                      ...++++++.+..++++++++|+|+|++|+.++|+++.+|++ |++++++++|++.++++|++.++++.+. +.+++.+.
T Consensus       151 ~~~ta~~a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~-vi~~~~~~~~~~~~~~~Ga~~~i~~~~~-~~~~~~~~  228 (349)
T TIGR03201       151 AVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDK-SAREVKKL  228 (349)
T ss_pred             hHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHhCCceEecCccc-cHHHHHHH
Confidence            677788888778889999999999999999999999999996 8889999999999999999999987652 33578888


Q ss_pred             HHHHhcCCCCc----eEEEcccchhhhhhc
Q psy1413         381 IIELLQGEQPD----KTIDCSGIESTIKLG  406 (408)
Q Consensus       381 ~~~~~~~~~~d----~i~d~~g~~~~~~~~  406 (408)
                      ++++++++++|    .+|||+|+....+.+
T Consensus       229 ~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~  258 (349)
T TIGR03201       229 IKAFAKARGLRSTGWKIFECSGSKPGQESA  258 (349)
T ss_pred             HHhhcccCCCCCCcCEEEECCCChHHHHHH
Confidence            88998888887    899999988766554

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=99.92  E-value=7.6e-25  Score=210.45  Aligned_cols=226  Identities=20%  Similarity=0.273  Sum_probs=160.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcc------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPI------------   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~------------   68 (408)
                      |+++|||++|++.+..+..  ...++|.++|||++|+|+++|++|+.+ +||||++.+...|..+..|            
T Consensus        30 v~~~gic~sD~~~~~~~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~  106 (349)
T TIGR03201        30 VAGCGVCHTDLSYYYMGVR--TNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQK  106 (349)
T ss_pred             EEEEeecccchHHHcCCCC--ccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCC
Confidence            4689999999998744431  123568999999999999999999887 9999987654332222221            


Q ss_pred             ---------------------eeccc------eeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccc
Q psy1413          69 ---------------------LRRRF------SLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSD  120 (408)
Q Consensus        69 ---------------------~~~p~------~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~  120 (408)
                                           +..|+      .+++++.+.++.+..+++.+.. ...+ .+++++|+|+|++|++++++
T Consensus       107 ~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~  185 (349)
T TIGR03201       107 MPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQT  185 (349)
T ss_pred             ccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHH
Confidence                                 11111      1111111111111111111100 1112 47899999999999999888


Q ss_pred             cccccCc---------------------------------------------c----eeEEEccCchH---HHHhhccCC
Q psy1413         121 PMIVGHE---------------------------------------------A----SGIVSKVGAKV---KHLKATRPG  148 (408)
Q Consensus       121 a~~~G~~---------------------------------------------~----~~vv~~~g~~~---~~~~~l~~g  148 (408)
                      ++.+|+.                                             +    +.+++++|...   .++++++++
T Consensus       186 a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~  265 (349)
T TIGR03201       186 AKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG  265 (349)
T ss_pred             HHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC
Confidence            8766641                                             1    14677777543   578999999


Q ss_pred             cEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         149 GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       149 G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                      |+++.+|.+..+..++...++.+++++.|++..+ .+++++++++++|++++.++++ +|||+|+++||+.+.+++. .+
T Consensus       266 G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~-~~  343 (349)
T TIGR03201       266 GTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKL-KR  343 (349)
T ss_pred             CeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCc-cc
Confidence            9999999887667788888888999999998765 7899999999999999888876 6999999999999998764 46


Q ss_pred             EEEEE
Q psy1413         228 KVMIH  232 (408)
Q Consensus       228 kvvi~  232 (408)
                      |++++
T Consensus       344 k~~~~  348 (349)
T TIGR03201       344 RAILT  348 (349)
T ss_pred             eEEec
Confidence            66653

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.92  E-value=7.4e-25  Score=212.17  Aligned_cols=225  Identities=18%  Similarity=0.221  Sum_probs=156.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------   62 (408)
                      |.++|||++|++.+. |..+  ...+|.++|||++|+|+++|++|++|++||||++.+...|                  
T Consensus        34 v~a~gi~~~D~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~  110 (369)
T cd08301          34 ILHTSLCHTDVYFWE-AKGQ--TPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLR  110 (369)
T ss_pred             EEEEeeCchhHHHhc-CCCC--CCCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcc
Confidence            468999999999884 4321  3467999999999999999999999999999987542211                  


Q ss_pred             -------------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCe
Q psy1413          63 -------------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSD  104 (408)
Q Consensus        63 -------------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~  104 (408)
                                                           .+...++..|+.+++++.+.++....+++.+...... ..+++
T Consensus       111 ~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~  190 (369)
T cd08301         111 INTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGST  190 (369)
T ss_pred             cccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCE
Confidence                                                 1111223333334332222222222222211111111 24789


Q ss_pred             EEEEccCccccccccccccccC-c-------------------------------------------ceeEEEccCch--
Q psy1413         105 VHYLTHGQIGDFRLSDPMIVGH-E-------------------------------------------ASGIVSKVGAK--  138 (408)
Q Consensus       105 vlv~g~G~vG~~~i~~a~~~G~-~-------------------------------------------~~~vv~~~g~~--  138 (408)
                      ++|+|+|++|++++|+++.+|+ .                                           ++.+++++|..  
T Consensus       191 VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~  270 (369)
T cd08301         191 VAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDA  270 (369)
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHH
Confidence            9999999999999998887775 1                                           23344555432  


Q ss_pred             -HHHHhhccCC-cEEEEEccCCC--CcccCHHHHHhcCcEEEEeecCC----CcHHHHHHHHHcCCCCCCCceeeeeccc
Q psy1413         139 -VKHLKATRPG-GCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRYA----NDYPIALAMVASGKVDVKKLITHNYLLE  210 (408)
Q Consensus       139 -~~~~~~l~~g-G~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~  210 (408)
                       .+++++++++ |+++.+|....  .++++...+ ++++++.|++..+    .+++++++++++++++++++++++|||+
T Consensus       271 ~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~  349 (369)
T cd08301         271 MISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFS  349 (369)
T ss_pred             HHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHH
Confidence             2578899996 99999998764  344554444 4799999987542    4689999999999999999999999999


Q ss_pred             hHHHHHHHHHcCCCCceEEEE
Q psy1413         211 DTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       211 ~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      |+++||+.+.+++.  .|+++
T Consensus       350 ~~~~A~~~~~~~~~--~k~~~  368 (369)
T cd08301         350 EINKAFDLLLKGEC--LRCIL  368 (369)
T ss_pred             HHHHHHHHHHCCCc--eeEEe
Confidence            99999999998753  57765

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.92  E-value=9.3e-25  Score=211.09  Aligned_cols=224  Identities=22%  Similarity=0.260  Sum_probs=160.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------   62 (408)
                      |+++|||++|++.+. |.   .+..+|.++|||++|+|+++|++|+++++||||+..+...|                  
T Consensus        34 v~~~gi~~sD~~~~~-g~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~  109 (365)
T cd08277          34 MLATSVCHTDILAIE-GF---KATLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYR  109 (365)
T ss_pred             EEEEeechhhHHHhc-CC---CCCCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCcc
Confidence            468999999999884 32   23467899999999999999999999999999987542211                  


Q ss_pred             -----------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEE
Q psy1413          63 -----------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVH  106 (408)
Q Consensus        63 -----------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vl  106 (408)
                                                         .+...++..|+++++++.+.++.+..+++.+...... ..+++++
T Consensus       110 ~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vl  189 (365)
T cd08277         110 ANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVA  189 (365)
T ss_pred             ccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEE
Confidence                                               1112333344444443333333333333321111111 2478999


Q ss_pred             EEccCccccccccccccccCc--------------------------------------------ceeEEEccCch---H
Q psy1413         107 YLTHGQIGDFRLSDPMIVGHE--------------------------------------------ASGIVSKVGAK---V  139 (408)
Q Consensus       107 v~g~G~vG~~~i~~a~~~G~~--------------------------------------------~~~vv~~~g~~---~  139 (408)
                      |+|+|++|++++++++.+|+.                                            ++.+++++|..   .
T Consensus       190 V~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~  269 (365)
T cd08277         190 VFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMN  269 (365)
T ss_pred             EECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHH
Confidence            999999999998888877751                                            23345555532   2


Q ss_pred             HHHhhccCC-cEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC----CcHHHHHHHHHcCCCCCCCceeeeeccchHH
Q psy1413         140 KHLKATRPG-GCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA----NDYPIALAMVASGKVDVKKLITHNYLLEDTL  213 (408)
Q Consensus       140 ~~~~~l~~g-G~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~  213 (408)
                      +++++++++ |+++.+|.... ..+++...++. ++++.|++...    .+++++++++++++++++++++++|+|+|++
T Consensus       270 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~  348 (365)
T cd08277         270 EALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEIN  348 (365)
T ss_pred             HHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHH
Confidence            578899885 99999998653 45666666664 89999887643    4689999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCceEEEE
Q psy1413         214 HAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       214 ~a~~~~~~~~~~~~kvvi  231 (408)
                      +||+.+.+++  ..|+++
T Consensus       349 ~A~~~~~~~~--~~k~~i  364 (365)
T cd08277         349 KGFDLMKSGE--CIRTVI  364 (365)
T ss_pred             HHHHHHHCCC--CceEee
Confidence            9999998875  467765

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.92  E-value=5.4e-24  Score=204.46  Aligned_cols=238  Identities=34%  Similarity=0.555  Sum_probs=191.1

Q ss_pred             eccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEE-EccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          70 RRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHY-LTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        70 ~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv-~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      ..+..+.. .+.+.|.+ .+..+++.+.++++++.++.. .+.+.  .   ..+...|.++.|+|..+|+..+.++.   
T Consensus         7 ~~~~~~~~-~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~---~~p~i~G~e~~G~V~~vG~~v~~~~v---   77 (347)
T PRK10309          7 DTDGIVRV-AESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--H---YYPITLGHEFSGYVEAVGSGVDDLHP---   77 (347)
T ss_pred             eCCCceEE-EECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--C---CCCcccccceEEEEEEeCCCCCCCCC---
Confidence            33445555 55677776 478889999999998877643 22221  1   13556899999999999975443444   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (347)
T PRK10309         78 --------------------------------------------------------------------------------   77 (347)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhh
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVH  307 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~  307 (408)
                           +|+|+..+..+|+.|.+|..|.++.|.+....+. ..+|+|++|+.++++.++++|+++++++++.+++++++++
T Consensus        78 -----Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~~  151 (347)
T PRK10309         78 -----GDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLH  151 (347)
T ss_pred             -----CCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHHH
Confidence                 9999998888999999999999999988665554 3589999999999999999999999998887766666777


Q ss_pred             hhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       308 ~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      ++....++++++++|+|+|++|+.++|+|+.+|++.|+++++++++++.++++|++.++++++    .+ .+.+.+++.+
T Consensus       152 ~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~----~~-~~~~~~~~~~  226 (347)
T PRK10309        152 AFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE----MS-APQIQSVLRE  226 (347)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc----cC-HHHHHHHhcC
Confidence            776777889999999988999999999999999987888899999999999999999998765    23 3456667767


Q ss_pred             CCCc-eEEEcccchhhhhhcC
Q psy1413         388 EQPD-KTIDCSGIESTIKLGM  407 (408)
Q Consensus       388 ~~~d-~i~d~~g~~~~~~~~~  407 (408)
                      .++| ++|||+|+..+++.++
T Consensus       227 ~~~d~~v~d~~G~~~~~~~~~  247 (347)
T PRK10309        227 LRFDQLILETAGVPQTVELAI  247 (347)
T ss_pred             CCCCeEEEECCCCHHHHHHHH
Confidence            7898 9999999887766553

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.91  E-value=1.1e-23  Score=203.92  Aligned_cols=238  Identities=28%  Similarity=0.407  Sum_probs=190.3

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.. +..++|.+.+.++++.+.++++++.++.++- |...  ...++..+|.|+.|+|..+|+..+.++.         
T Consensus        14 ~~~l-~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~---------   80 (369)
T cd08301          14 PLVI-EEVEVAPPQAMEVRIKILHTSLCHTDVYFWE-AKGQ--TPLFPRILGHEAAGIVESVGEGVTDLKP---------   80 (369)
T ss_pred             CcEE-EEeeCCCCCCCeEEEEEEEEeeCchhHHHhc-CCCC--CCCCCcccccccceEEEEeCCCCCcccc---------
Confidence            4566 5667788888999999999999998876642 1111  1234567899999999999975444444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        81 -------------------------------------------------------------------------------G   81 (369)
T cd08301          81 -------------------------------------------------------------------------------G   81 (369)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           9


Q ss_pred             CceeecCCCcccccccccCCccccccceeec---ccC------------------CCCccceeEEeeccceeeeCCCCCC
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---ATP------------------PDHGNLSRYYRHAADFCHKLPDHVS  292 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~~~~~~~~~~~~~~~p~~~~  292 (408)
                      |+|+..+..+|++|..|..+.++.|.+....   |..                  ...|+|++|..++++.++++|++++
T Consensus        82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~  161 (369)
T cd08301          82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAP  161 (369)
T ss_pred             CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCC
Confidence            9999888899999999999999999875432   110                  0248899999999999999999999


Q ss_pred             cccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       293 ~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      ++++++++ ...++++++ ....+++++++||+|+|++|++++|+++.+|+.+|+++++++++.+.++++|++.++++.+
T Consensus       162 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~  241 (369)
T cd08301         162 LDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD  241 (369)
T ss_pred             HHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc
Confidence            98888776 456677765 5577899999999988999999999999999977999999999999999999999998754


Q ss_pred             CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      .  .+++.+.+++++.+ ++|++|||+|+......+
T Consensus       242 ~--~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~  274 (369)
T cd08301         242 H--DKPVQEVIAEMTGG-GVDYSFECTGNIDAMISA  274 (369)
T ss_pred             c--chhHHHHHHHHhCC-CCCEEEECCCChHHHHHH
Confidence            1  13566778888765 899999999987655443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.91  E-value=1.1e-23  Score=202.54  Aligned_cols=245  Identities=38%  Similarity=0.631  Sum_probs=198.5

Q ss_pred             ceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccc--------cccccccccCcceeEEEccCchH
Q psy1413          68 ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF--------RLSDPMIVGHEASGIVSKVGAKV  139 (408)
Q Consensus        68 ~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~--------~i~~a~~~G~~~~~vv~~~g~~~  139 (408)
                      ++..|+.+.+ +..+.|.+.+.++++++.++++++.++...-.+.....        .......+|.++.|+|..+|...
T Consensus         5 ~~~~~~~l~~-~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   83 (351)
T cd08233           5 RYHGRKDIRV-EEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGV   83 (351)
T ss_pred             EEecCCceEE-EeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCC
Confidence            3445666777 66788888888999999999998877654321211000        01235568999999999999754


Q ss_pred             HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHH
Q psy1413         140 KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETA  219 (408)
Q Consensus       140 ~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~  219 (408)
                      +.++.                                                                           
T Consensus        84 ~~~~~---------------------------------------------------------------------------   88 (351)
T cd08233          84 TGFKV---------------------------------------------------------------------------   88 (351)
T ss_pred             CCCCC---------------------------------------------------------------------------
Confidence            33333                                                                           


Q ss_pred             HcCCCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCccccccc
Q psy1413         220 KTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALL  299 (408)
Q Consensus       220 ~~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~  299 (408)
                                   +|+|...+..+|++|.+|..+.+++|.+..+++....+|+|++|+.++.+.++++|++++.++++.+
T Consensus        89 -------------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~  155 (351)
T cd08233          89 -------------GDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV  155 (351)
T ss_pred             -------------CCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc
Confidence                         8999988888999999999999999998766554434799999999999999999999998888876


Q ss_pred             chhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHH
Q psy1413         300 EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIST  379 (408)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~  379 (408)
                      .++.++|+++....++++++++|+|+|++|++++|+++.+|+++|+++++++++.+.++++|++.++++++    .++.+
T Consensus       156 ~~~~ta~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~----~~~~~  231 (351)
T cd08233         156 EPLAVAWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE----VDVVA  231 (351)
T ss_pred             cHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc----cCHHH
Confidence            67778899887788899999999988999999999999999977999999999999999999999999876    56777


Q ss_pred             HHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         380 HIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       380 ~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      .+++.+.++++|++|||+|...+++.
T Consensus       232 ~l~~~~~~~~~d~vid~~g~~~~~~~  257 (351)
T cd08233         232 EVRKLTGGGGVDVSFDCAGVQATLDT  257 (351)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHH
Confidence            88888877789999999997655543

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.91  E-value=2.3e-24  Score=208.54  Aligned_cols=226  Identities=20%  Similarity=0.257  Sum_probs=156.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------   62 (408)
                      |+++|||++|++.+. |..+  ...+|.++|||++|+|+++|++|++|++||||+..+...|                  
T Consensus        34 v~a~gi~~~D~~~~~-g~~~--~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~  110 (368)
T cd08300          34 ILATGVCHTDAYTLS-GADP--EGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIR  110 (368)
T ss_pred             EEEEEechhhHHHhc-CCCc--cCCCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCcc
Confidence            468999999999884 3322  2367999999999999999999999999999986532111                  


Q ss_pred             ------------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeE
Q psy1413          63 ------------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDV  105 (408)
Q Consensus        63 ------------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~v  105 (408)
                                                          .+...++..|+++++++.+.++.+..+++.+......+ .++++
T Consensus       111 ~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~V  190 (368)
T cd08300         111 ATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTV  190 (368)
T ss_pred             ccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEE
Confidence                                                11123334455555533333433333333221111122 47899


Q ss_pred             EEEccCccccccccccccccCc--------------------------------------------ceeEEEccCch---
Q psy1413         106 HYLTHGQIGDFRLSDPMIVGHE--------------------------------------------ASGIVSKVGAK---  138 (408)
Q Consensus       106 lv~g~G~vG~~~i~~a~~~G~~--------------------------------------------~~~vv~~~g~~---  138 (408)
                      +|+|+|++|++++|+++.+|+.                                            ++.+++++|..   
T Consensus       191 lV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~  270 (368)
T cd08300         191 AVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVM  270 (368)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHH
Confidence            9999999999999988877651                                            23455555542   


Q ss_pred             HHHHhhccCC-cEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413         139 VKHLKATRPG-GCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLED  211 (408)
Q Consensus       139 ~~~~~~l~~g-G~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~  211 (408)
                      .+++++++++ |+++.+|....  +..++...+. ++.++.++...    .+++++++++++++++++.++++++|+|+|
T Consensus       271 ~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~  349 (368)
T cd08300         271 RAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDE  349 (368)
T ss_pred             HHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHH
Confidence            2578999887 99999997643  3344444443 34566665432    367899999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCceEEEEE
Q psy1413         212 TLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       212 ~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +++||+.+.+++  ..|++++
T Consensus       350 ~~~A~~~~~~~~--~~k~~~~  368 (368)
T cd08300         350 INEAFDLMHAGK--SIRTVVK  368 (368)
T ss_pred             HHHHHHHHhCCC--CceeeeC
Confidence            999999998764  4677763

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.91  E-value=1.1e-23  Score=203.61  Aligned_cols=237  Identities=30%  Similarity=0.456  Sum_probs=189.4

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.. ++.+.|.+.+..+++.+.++++++.++.+.. |..   ...++...|.++.|+|..+|...+.++.         
T Consensus        14 ~~~~-~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~-g~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~---------   79 (365)
T cd08277          14 PLVI-EEIEVAPPKANEVRIKMLATSVCHTDILAIE-GFK---ATLFPVILGHEGAGIVESVGEGVTNLKP---------   79 (365)
T ss_pred             CcEE-EEEECCCCCCCEEEEEEEEEeechhhHHHhc-CCC---CCCCCeecccceeEEEEeeCCCCccCCC---------
Confidence            3555 5567788888899999999999988776642 211   1234567899999999999975443444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        80 -------------------------------------------------------------------------------G   80 (365)
T cd08277          80 -------------------------------------------------------------------------------G   80 (365)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecCCCcccccccccCCccccccceeecccCC-------------------CCccceeEEeeccceeeeCCCCCCcc
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPP-------------------DHGNLSRYYRHAADFCHKLPDHVSLE  294 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~g~~~~~~~~~~~~~~~~p~~~~~~  294 (408)
                      |+|+..+..+|++|.+|.++.++.|++......+.                   ..|+|++|+.++++.++++|++++++
T Consensus        81 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~  160 (365)
T cd08277          81 DKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLE  160 (365)
T ss_pred             CEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHH
Confidence            99988888899999999999999998754321110                   25899999999999999999999999


Q ss_pred             cccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCC
Q psy1413         295 EGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNH  372 (408)
Q Consensus       295 ~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~  372 (408)
                      ++++++ .+.++++++ +...++++++++|+|+|++|+.++|+++.+|+.+|++++++++|++.++++|++.+++.++. 
T Consensus       161 ~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~-  239 (365)
T cd08277         161 HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS-  239 (365)
T ss_pred             HhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccc-
Confidence            888877 567788776 66788999999999889999999999999999779999999999999999999999987541 


Q ss_pred             ChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         373 SLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                       ..++.+.+++++. +++|++|||+|....++.+
T Consensus       240 -~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~  271 (365)
T cd08277         240 -DKPVSEVIREMTG-GGVDYSFECTGNADLMNEA  271 (365)
T ss_pred             -cchHHHHHHHHhC-CCCCEEEECCCChHHHHHH
Confidence             1245667777776 6899999999976665543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.91  E-value=4.9e-24  Score=208.99  Aligned_cols=234  Identities=18%  Similarity=0.197  Sum_probs=161.0

Q ss_pred             CCeeeecccchhhhhcCCC-CCC---CCCCCccccCCccEEEEEeCCCCC-CCCCCCEEEEccCccc-------------
Q psy1413           1 MHCVGICGSDVHYLTHGQI-GDF---RLSDPMIVGHEASGIVSKVGAKVK-HLKVDNQTRFVPEFRN-------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~-~~~---~~~~P~i~GhE~~G~Vv~vG~~v~-~~~vGdrV~~~~~~~~-------------   62 (408)
                      |+++|||++|++.+..|.. +..   ..++|.++|||++|+|+++|++|+ +|++||||++.+...+             
T Consensus        33 V~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~  112 (410)
T cd08238          33 VISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTY  112 (410)
T ss_pred             EEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccC
Confidence            4689999999997644421 110   124789999999999999999998 6999999987653221             


Q ss_pred             ---------ccCC----cceeccceeeecccccCCCCCCc---ceEEEE--------eeeee-cCCeEEEEc-cCccccc
Q psy1413          63 ---------VCLS----PILRRRFSLRFREQKPIEDPDDH---EVLLEM--------HCVGI-CGSDVHYLT-HGQIGDF  116 (408)
Q Consensus        63 ---------~~~~----~~~~~p~~~~~~~~~~lp~~~~~---~~~~~~--------~~~~~-~g~~vlv~g-~G~vG~~  116 (408)
                               .+.+    .++..|++++++ .+++.+++..   ++.+..        ....+ .+++++|+| +|++|++
T Consensus       113 ~G~~aey~~v~~~~~~~~~~~lP~~l~~~-~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~  191 (410)
T cd08238         113 PGGLATYHIIPNEVMEQDCLLIYEGDGYA-EASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLM  191 (410)
T ss_pred             CCcceEEEEecHHhccCCeEECCCCCCHH-HHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHH
Confidence                     1111    234445555542 2222212111   110000        11222 468899997 7999999


Q ss_pred             cccccccccC---c----------------------------------------------------ceeEEEccCchH--
Q psy1413         117 RLSDPMIVGH---E----------------------------------------------------ASGIVSKVGAKV--  139 (408)
Q Consensus       117 ~i~~a~~~G~---~----------------------------------------------------~~~vv~~~g~~~--  139 (408)
                      ++|+++.+|.   .                                                    ++.+++++|...  
T Consensus       192 aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~  271 (410)
T cd08238         192 AIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELV  271 (410)
T ss_pred             HHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHH
Confidence            9888877542   0                                                    011222222211  


Q ss_pred             -HHHhhccCCcEEEEEccC-CC--CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHH
Q psy1413         140 -KHLKATRPGGCLVIVGAG-SQ--DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLH  214 (408)
Q Consensus       140 -~~~~~l~~gG~iv~~G~~-~~--~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~  214 (408)
                       +++++++++|+++.++.. ..  +.++++..++++++++.|++..+ .+++++++++++|++++.++++|+|||+|+++
T Consensus       272 ~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~  351 (410)
T cd08238         272 EEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAE  351 (410)
T ss_pred             HHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHH
Confidence             568999999988877543 22  35678888999999999998765 78999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCceEEEEEcCcee
Q psy1413         215 AFETAKTGAGNAIKVMIHCDRVA  237 (408)
Q Consensus       215 a~~~~~~~~~~~~kvvi~~~~v~  237 (408)
                      ||+.+. ++ ..+|+++..+++.
T Consensus       352 A~~~~~-~~-~~gKvvl~~~~~~  372 (410)
T cd08238         352 TTLNLP-GI-PGGKKLIYTQKPL  372 (410)
T ss_pred             HHHHhh-cc-CCceEEEECCCCC
Confidence            999999 43 5689999887763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.90  E-value=8.7e-24  Score=203.36  Aligned_cols=229  Identities=25%  Similarity=0.345  Sum_probs=168.6

Q ss_pred             CCeeeecccchhhhhcCCCCCC--------CCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-----------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDF--------RLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-----------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~--------~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-----------   61 (408)
                      +.++|+|++|++.+..+.....        ...+|.++|||++|+|+++|++|+.+++||+|...+...           
T Consensus        31 v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~  110 (351)
T cd08233          31 VAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGL  110 (351)
T ss_pred             EEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcC
Confidence            4689999999987643321100        123689999999999999999999999999998643211           


Q ss_pred             -----------------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccc
Q psy1413          62 -----------------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFR  117 (408)
Q Consensus        62 -----------------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~  117 (408)
                                             ..+...++..|+++++++. ....+..+++.+. ....+ .+++++|+|+|++|+++
T Consensus       111 ~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~a-a~~~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a  188 (351)
T cd08233         111 YNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEA-ALVEPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLT  188 (351)
T ss_pred             cccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHh-hhccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHH
Confidence                                   1222334444555554222 2222222222111 11112 47889999999999999


Q ss_pred             ccccccccC-------------------------------------------cceeEEEccCch---HHHHhhccCCcEE
Q psy1413         118 LSDPMIVGH-------------------------------------------EASGIVSKVGAK---VKHLKATRPGGCL  151 (408)
Q Consensus       118 i~~a~~~G~-------------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~i  151 (408)
                      +|+++.+|+                                           .++.+++++|..   .+.+++++++|++
T Consensus       189 ~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~  268 (351)
T cd08233         189 ILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTA  268 (351)
T ss_pred             HHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEE
Confidence            888887665                                           145566666532   2678999999999


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchH-HHHHHHHHcCCCCceEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDT-LHAFETAKTGAGNAIKV  229 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~-~~a~~~~~~~~~~~~kv  229 (408)
                      +.+|....+.+++...++.+++++.+.+... .+++++++++++++++++++++++|+|+|+ ++||+.+.+++...+|+
T Consensus       269 v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~  348 (351)
T cd08233         269 VNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKI  348 (351)
T ss_pred             EEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEE
Confidence            9999877777888888999999999998775 889999999999999988999999999996 79999999998767888


Q ss_pred             EE
Q psy1413         230 MI  231 (408)
Q Consensus       230 vi  231 (408)
                      ++
T Consensus       349 v~  350 (351)
T cd08233         349 LV  350 (351)
T ss_pred             Ee
Confidence            86

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=99.90  E-value=1.1e-22  Score=197.07  Aligned_cols=237  Identities=30%  Similarity=0.422  Sum_probs=187.6

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV  152 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv  152 (408)
                      ..+.. ++.++|.+.+..+++.+..+++++.++.+.- |..   ........|.++.|++..+|...+.++.        
T Consensus        18 ~~~~l-~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~-g~~---~~~~p~v~G~e~~G~V~~vG~~v~~~~~--------   84 (373)
T cd08299          18 KPFSI-EEIEVAPPKAHEVRIKIVATGICRSDDHVVS-GKL---VTPFPVILGHEAAGIVESVGEGVTTVKP--------   84 (373)
T ss_pred             CCcEE-EEeecCCCCCCEEEEEEEEEEcCcccHHHhc-CCC---CCCCCccccccceEEEEEeCCCCccCCC--------
Confidence            34555 5667777778888999999999988876642 222   1234557899999999999965433333        


Q ss_pred             EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                                                                                                      
T Consensus        85 --------------------------------------------------------------------------------   84 (373)
T cd08299          85 --------------------------------------------------------------------------------   84 (373)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCceeecCCCcccccccccCCccccccceeeccc--------------------CCCCccceeEEeeccceeeeCCCCCC
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCAT--------------------PPDHGNLSRYYRHAADFCHKLPDHVS  292 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~~p~~~~  292 (408)
                      +|+|+..+..+|++|.+|.+++++.|+.....+.                    ....|+|++|..++++.++++|++++
T Consensus        85 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~  164 (373)
T cd08299          85 GDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAP  164 (373)
T ss_pred             CCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCC
Confidence            8999888888999999999999999986543210                    00258999999999999999999999


Q ss_pred             cccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       293 ~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      +++++.++ .+.++++++ ....++++++++|+|+|++|++++++++.+|+++|+++++++++++.++++|++.+++..+
T Consensus       165 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~  244 (373)
T cd08299         165 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQD  244 (373)
T ss_pred             hHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc
Confidence            98888877 667788775 6678899999999977999999999999999977999999999999999999999998754


Q ss_pred             CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      .  .++..+.+.++++ +++|.++||+|+...+..
T Consensus       245 ~--~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~  276 (373)
T cd08299         245 Y--KKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKA  276 (373)
T ss_pred             c--chhHHHHHHHHhC-CCCeEEEECCCCcHHHHH
Confidence            1  1235666777775 589999999997655443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08230 glucose_DH Glucose dehydrogenase

Probab=99.90  E-value=9.2e-23  Score=196.49  Aligned_cols=230  Identities=29%  Similarity=0.461  Sum_probs=175.1

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccc-cccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF-RLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~-~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      +.+ +..++|.+.+.++++.+.++++++.++.+.- |..... ........|+|+.|+|..+|+. +.++.         
T Consensus        13 l~~-~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~-g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~v---------   80 (355)
T cd08230          13 VRV-VDIPEPEPTPGEVLVRTLEVGVCGTDREIVA-GEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSP---------   80 (355)
T ss_pred             CeE-EeCCCCCCCCCeEEEEEEEEEeccccHHHHc-CCCCCCCCCCCCeeeccccceEEEEecCC-CCCCC---------
Confidence            666 5678888889999999999999988876642 111110 1123456899999999999976 54554         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        81 -------------------------------------------------------------------------------G   81 (355)
T cd08230          81 -------------------------------------------------------------------------------G   81 (355)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           9


Q ss_pred             CceeecCCCcccccccccCCccccccceeec--ccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhh--
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC--ATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHAC--  309 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~--  309 (408)
                      |+|...+..+|+.|..|..|+++.|+....+  |....+|+|++|+.++++.++++|++++ +.+++..++++++.++  
T Consensus        82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~~~~a~~~  160 (355)
T cd08230          82 DLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAIEQ  160 (355)
T ss_pred             CEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHHHHHHHHH
Confidence            9999888889999999999999999876543  3323579999999999999999999999 5565555555544433  


Q ss_pred             -----hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEec---ChhhHHHHHHcCCCeEEecCCCCChHHHHHHH
Q psy1413         310 -----RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDI---LEHKLKTAKEMGADATVLIDRNHSLEEISTHI  381 (408)
Q Consensus       310 -----~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~---~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~  381 (408)
                           +....+++++++|+|+|++|+.++|+|+.+|++ |+++++   +++|++.++++|++. +++.+    ++..+ .
T Consensus       161 ~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~-vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~----~~~~~-~  233 (355)
T cd08230         161 AEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFE-VYVLNRRDPPDPKADIVEELGATY-VNSSK----TPVAE-V  233 (355)
T ss_pred             HhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHcCCEE-ecCCc----cchhh-h
Confidence                 122357899999998899999999999999996 888887   678899999999987 45544    33333 2


Q ss_pred             HHHhcCCCCceEEEcccchhhhhhc
Q psy1413         382 IELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       382 ~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      + .  ..++|++|||+|.+..++.+
T Consensus       234 ~-~--~~~~d~vid~~g~~~~~~~~  255 (355)
T cd08230         234 K-L--VGEFDLIIEATGVPPLAFEA  255 (355)
T ss_pred             h-h--cCCCCEEEECcCCHHHHHHH
Confidence            1 1  35899999999987665554

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.89  E-value=2e-22  Score=193.29  Aligned_cols=245  Identities=59%  Similarity=1.024  Sum_probs=193.4

Q ss_pred             ceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          68 ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        68 ~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      ++..++.+.+ +..+.|.+.+..+++++.+.+++..++.+...+..|......+...|.++.|++..+|.....++.   
T Consensus         3 ~~~~~~~~~~-~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~---   78 (343)
T cd05285           3 VLHGPGDLRL-EERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKV---   78 (343)
T ss_pred             eEecCCceeE-EECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCC---
Confidence            4556667777 556777777888889999999987776554223333322233456789999999999864333333   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        79 --------------------------------------------------------------------------------   78 (343)
T cd05285          79 --------------------------------------------------------------------------------   78 (343)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhh
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVH  307 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~  307 (408)
                           +++|...+..+|+.|..|..|.+++|++..+.+....+|+|++|+.++++.++++|++++.++++.+.++.++++
T Consensus        79 -----Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~  153 (343)
T cd05285          79 -----GDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVH  153 (343)
T ss_pred             -----CCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHH
Confidence                 889988888999999999999999998765533333579999999999999999999999888887667778888


Q ss_pred             hhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       308 ~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      ++....++++++++|+|+|++|+.++|+|+.+|+++|+++++++++.+.++++|++.++++++. +...+.+.+.+.+.+
T Consensus       154 ~~~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~  232 (343)
T cd05285         154 ACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTE-DTPESAEKIAELLGG  232 (343)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccc-cchhHHHHHHHHhCC
Confidence            8877889999999998779999999999999999878888888999999999999999988761 111136667777877


Q ss_pred             CCCceEEEcccchhh
Q psy1413         388 EQPDKTIDCSGIEST  402 (408)
Q Consensus       388 ~~~d~i~d~~g~~~~  402 (408)
                      +++|++|||+|+...
T Consensus       233 ~~~d~vld~~g~~~~  247 (343)
T cd05285         233 KGPDVVIECTGAESC  247 (343)
T ss_pred             CCCCEEEECCCCHHH
Confidence            889999999997633

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=99.89  E-value=1.6e-22  Score=194.88  Aligned_cols=227  Identities=23%  Similarity=0.384  Sum_probs=173.3

Q ss_pred             ccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEEccCC
Q psy1413          79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGS  158 (408)
Q Consensus        79 ~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~~  158 (408)
                      ...+.|.+.+.++++.+.++++++.++.+.- |..+  ....+..+|.|+.|+|..+|+..+.++.              
T Consensus        28 ~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~-g~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~~v--------------   90 (360)
T PLN02586         28 FHFSRRENGDEDVTVKILYCGVCHSDLHTIK-NEWG--FTRYPIVPGHEIVGIVTKLGKNVKKFKE--------------   90 (360)
T ss_pred             EeecCCCCCCCeEEEEEEEecCChhhHhhhc-CCcC--CCCCCccCCcceeEEEEEECCCCCccCC--------------
Confidence            3445566778889999999999998887652 2222  1234667899999999999975444444              


Q ss_pred             CCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceee
Q psy1413         159 QDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAI  238 (408)
Q Consensus       159 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~  238 (408)
                                                                                                +|+|.+
T Consensus        91 --------------------------------------------------------------------------GdrV~~   96 (360)
T PLN02586         91 --------------------------------------------------------------------------GDRVGV   96 (360)
T ss_pred             --------------------------------------------------------------------------CCEEEE
Confidence                                                                                      899976


Q ss_pred             cCC-CcccccccccCCccccccceeeccc------CCCCccceeEEeeccceeeeCCCCCCcccccccch-hhhhhhhhh
Q psy1413         239 EPG-VPCRTCTYCKEGRYNLCRQIFFCAT------PPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEP-LSVGVHACR  310 (408)
Q Consensus       239 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~-~~~~~~~~~  310 (408)
                      .+. .+|+.|.+|..|.+++|++..+...      ...+|+|++|+.++++.++++|+++++++++++++ ..++++++.
T Consensus        97 ~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~  176 (360)
T PLN02586         97 GVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMK  176 (360)
T ss_pred             ccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHH
Confidence            554 5799999999999999998654311      12479999999999999999999999999887774 555677764


Q ss_pred             c-cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhh-HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         311 R-AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK-LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       311 ~-~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      . ...+++++++|.|+|++|+.++|+++.+|++ +++++.++++ .+.++++|++.+++.++    .   +.+++.++  
T Consensus       177 ~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~~Ga~~vi~~~~----~---~~~~~~~~--  246 (360)
T PLN02586        177 YYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINRLGADSFLVSTD----P---EKMKAAIG--  246 (360)
T ss_pred             HhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHhCCCcEEEcCCC----H---HHHHhhcC--
Confidence            3 4467899999988899999999999999997 6666666555 45668899999998654    2   23444442  


Q ss_pred             CCceEEEcccchhhhhhc
Q psy1413         389 QPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       389 ~~d~i~d~~g~~~~~~~~  406 (408)
                      ++|++||++|...+++.+
T Consensus       247 ~~D~vid~~g~~~~~~~~  264 (360)
T PLN02586        247 TMDYIIDTVSAVHALGPL  264 (360)
T ss_pred             CCCEEEECCCCHHHHHHH
Confidence            699999999987665544

>KOG1197|consensus

Probab=99.89  E-value=7.4e-24  Score=182.62  Aligned_cols=225  Identities=22%  Similarity=0.256  Sum_probs=170.5

Q ss_pred             CeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceecccee
Q psy1413           2 HCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFSL   75 (408)
Q Consensus         2 ~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~~   75 (408)
                      ++||+|.-|+..++ |-+.  +.+.|.+||-|++|+|+++|++|+++++||||....      +....+...++.+|+.+
T Consensus        43 ka~GlNfid~y~Rk-GlY~--~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~vpe~i  119 (336)
T KOG1197|consen   43 KACGLNFIDLYFRK-GLYD--PAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKVPEAI  119 (336)
T ss_pred             hhcCccHHHHHHhc-cccC--CCCCCcCCCcccceEEEEecCCccccccccEEEEeccchhhheeccccceeeccCCccc
Confidence            58999999999874 4321  668899999999999999999999999999998533      33456666777788888


Q ss_pred             eecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC---------------------------
Q psy1413          76 RFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH---------------------------  126 (408)
Q Consensus        76 ~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~---------------------------  126 (408)
                      .+.+++++.....+++.....+..+ +|++|+++. +|++|+...|++++.|+                           
T Consensus       120 ~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~  199 (336)
T KOG1197|consen  120 TLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYS  199 (336)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeecc
Confidence            8866666665566666444444444 488899965 99999999999887765                           


Q ss_pred             ---------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEee-----cCCC
Q psy1413         127 ---------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVF-----RYAN  183 (408)
Q Consensus       127 ---------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~-----~~~~  183 (408)
                                     .++.+.+++|.+.  .++.+|+++|+++.+|+... .-++++..+..|.+.+....     ..+.
T Consensus       200 ~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~  279 (336)
T KOG1197|consen  200 TEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEV  279 (336)
T ss_pred             chhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHH
Confidence                           4667788888765  68999999999999998765 44566666666666665433     2222


Q ss_pred             c----HHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         184 D----YPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       184 ~----~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .    ..+++.++.+|++++.  |.|+|||+++.+|+.++++++. .+|+++.
T Consensus       280 el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrkt-vGkvlLl  329 (336)
T KOG1197|consen  280 ELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKT-VGKVLLL  329 (336)
T ss_pred             HHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhc-cceEEEe
Confidence            2    3667788889988665  9999999999999999999765 4455544

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=99.89  E-value=1.9e-22  Score=195.00  Aligned_cols=231  Identities=23%  Similarity=0.379  Sum_probs=174.9

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.. ...+.|.+.+.++++.+.++++++.++.+.. |...  ...++..+|.|+.|+|..+|+..+.++.         
T Consensus        18 ~l~~-~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~-G~~~--~~~~p~i~GhE~aG~Vv~vG~~v~~~~v---------   84 (375)
T PLN02178         18 VLSP-FHFSRRENGENDVTVKILFCGVCHSDLHTIK-NHWG--FSRYPIIPGHEIVGIATKVGKNVTKFKE---------   84 (375)
T ss_pred             CceE-EeecCCCCCCCeEEEEEEEEcCchHHHHHhc-CCCC--CCCCCcccCceeeEEEEEECCCCCccCC---------
Confidence            3444 3445666778889999999999998877652 2111  1134567899999999999975444444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        85 -------------------------------------------------------------------------------G   85 (375)
T PLN02178         85 -------------------------------------------------------------------------------G   85 (375)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecCCC-cccccccccCCccccccceeeccc------CCCCccceeEEeeccceeeeCCCCCCcccccccch-hhhh
Q psy1413         234 DRVAIEPGV-PCRTCTYCKEGRYNLCRQIFFCAT------PPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEP-LSVG  305 (408)
Q Consensus       234 ~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~-~~~~  305 (408)
                      |+|.+.+.. +|+.|.+|..|++++|++..+...      ...+|+|++|+.++++.++++|+++++++++++++ ..++
T Consensus        86 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta  165 (375)
T PLN02178         86 DRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITV  165 (375)
T ss_pred             CEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHH
Confidence            999866654 699999999999999998643211      12369999999999999999999999998887774 4456


Q ss_pred             hhhhhccC--cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChh-hHHHHHHcCCCeEEecCCCCChHHHHHHHH
Q psy1413         306 VHACRRAG--VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEH-KLKTAKEMGADATVLIDRNHSLEEISTHII  382 (408)
Q Consensus       306 ~~~~~~~~--~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~  382 (408)
                      ++++....  .+++++++|.|+|++|+.++|+|+.+|++ |++++++++ +.+.++++|+++++++++    .   +.++
T Consensus       166 ~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-Vi~~~~~~~~~~~~a~~lGa~~~i~~~~----~---~~v~  237 (375)
T PLN02178        166 YSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLR-VTVISRSSEKEREAIDRLGADSFLVTTD----S---QKMK  237 (375)
T ss_pred             HHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCe-EEEEeCChHHhHHHHHhCCCcEEEcCcC----H---HHHH
Confidence            66664433  36899999998899999999999999997 777776654 467788999999998654    2   3445


Q ss_pred             HHhcCCCCceEEEcccchhhhhhc
Q psy1413         383 ELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       383 ~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      +.+.  ++|++|||+|...+++.+
T Consensus       238 ~~~~--~~D~vid~~G~~~~~~~~  259 (375)
T PLN02178        238 EAVG--TMDFIIDTVSAEHALLPL  259 (375)
T ss_pred             HhhC--CCcEEEECCCcHHHHHHH
Confidence            5552  699999999987665544

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.89  E-value=3.9e-22  Score=192.62  Aligned_cols=239  Identities=31%  Similarity=0.493  Sum_probs=190.0

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHH------HhhccC
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH------LKATRP  147 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~------~~~l~~  147 (408)
                      .+.+ +..++|.+.+.++++.+.++++++.++.+. .|....  ...+..+|.++.|+|..+|+....      ++.   
T Consensus        12 ~l~~-~~~~~p~~~~~evlV~v~a~~l~~~d~~~~-~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~---   84 (361)
T cd08231          12 PLEI-REVPLPDLEPGAVLVRVRLAGVCGSDVHTV-AGRRPR--VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKV---   84 (361)
T ss_pred             CCEE-EeccCCCCCCCeEEEEEEEEeecCccHHHh-cCCCCC--CCCCcccccCCceEEEEeCCCccccccCCccCC---
Confidence            5666 566778888889999999999988776553 121110  234567899999999999975322      333   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        85 --------------------------------------------------------------------------------   84 (361)
T cd08231          85 --------------------------------------------------------------------------------   84 (361)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeecccCC------CCccceeEEeeccc-eeeeCCCCCCcccccccc
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPP------DHGNLSRYYRHAAD-FCHKLPDHVSLEEGALLE  300 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~~  300 (408)
                           +|+|...+..+|+.|..|..+.++.|.+..+.+...      ..|+|++|+.++++ .++++|++++.++++.++
T Consensus        85 -----Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~  159 (361)
T cd08231          85 -----GDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPAN  159 (361)
T ss_pred             -----CCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhc
Confidence                 899998888899999999999999999887766532      36999999999996 799999999988888774


Q ss_pred             -hhhhhhhhhhccC-cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHH
Q psy1413         301 -PLSVGVHACRRAG-VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       301 -~~~~~~~~~~~~~-~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                       ++.|+++++.... .++++++||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|++.++++++. +..+..
T Consensus       160 ~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~  238 (361)
T cd08231         160 CALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDEL-PDPQRR  238 (361)
T ss_pred             CHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCccc-ccHHHH
Confidence             7788888885543 4589999999889999999999999999669999999999999999999999987652 123345


Q ss_pred             HHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         379 THIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       379 ~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      +.++++++++++|++|||+|+......
T Consensus       239 ~~i~~~~~~~~~d~vid~~g~~~~~~~  265 (361)
T cd08231         239 AIVRDITGGRGADVVIEASGHPAAVPE  265 (361)
T ss_pred             HHHHHHhCCCCCcEEEECCCChHHHHH
Confidence            678888888899999999987554443

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK10083 putative oxidoreductase; Provisional

Probab=99.89  E-value=1.2e-22  Score=194.55  Aligned_cols=229  Identities=20%  Similarity=0.244  Sum_probs=163.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |.++|||++|++.+. |..+  ..++|.++|||++|+|+++|++|+.+++||+|++.+...                   
T Consensus        31 v~~~gi~~~d~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (339)
T PRK10083         31 VKLAGICGSDSHIYR-GHNP--FAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLV  107 (339)
T ss_pred             EEEEEEcccchHHHc-CCCC--cCCCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCc
Confidence            468999999999874 3321  125689999999999999999999999999998644222                   


Q ss_pred             --------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccc-cc
Q psy1413          62 --------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMI-VG  125 (408)
Q Consensus        62 --------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~-~G  125 (408)
                                    ..+...++..|++++++. +.+..++.+++. ......+ .+++++|+|+|++|++++++++. +|
T Consensus       108 ~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~-a~~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G  185 (339)
T PRK10083        108 VLGVHRDGGFSEYAVVPAKNAHRIPDAIADQY-AVMVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYN  185 (339)
T ss_pred             eEEEccCCcceeeEEechHHeEECcCCCCHHH-HhhhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCC
Confidence                          122223333444444321 222222222221 0011112 47889999999999999998885 46


Q ss_pred             Cc-----------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCc
Q psy1413         126 HE-----------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDV  161 (408)
Q Consensus       126 ~~-----------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~  161 (408)
                      +.                                         ++.+++++|..   .+++++++++|+++.+|......
T Consensus       186 ~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~  265 (339)
T PRK10083        186 VKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPS  265 (339)
T ss_pred             CCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCc
Confidence            51                                         12456666632   26789999999999999765555


Q ss_pred             ccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         162 KIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       162 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      .++...+..+++++.+.....+.+++++++++++++++.++++++|+++++++|++.+.+++...+|+++++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~  338 (339)
T PRK10083        266 EIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFA  338 (339)
T ss_pred             eecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecC
Confidence            5555566678899888876567899999999999999877889999999999999999877666788888764

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.88  E-value=1.5e-22  Score=195.44  Aligned_cols=227  Identities=26%  Similarity=0.387  Sum_probs=163.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCC------CCCCCEEEEccCccc------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH------LKVDNQTRFVPEFRN------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~------~~vGdrV~~~~~~~~------------   62 (408)
                      |.++|||++|++.+. |..+.  ..+|.++|||++|+|+++|++|+.      |++||+|+..+.+.+            
T Consensus        32 v~a~~l~~~d~~~~~-g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~  108 (361)
T cd08231          32 VRLAGVCGSDVHTVA-GRRPR--VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPT  108 (361)
T ss_pred             EEEEeecCccHHHhc-CCCCC--CCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCcc
Confidence            468999999999884 43221  467899999999999999999986      999999987643211            


Q ss_pred             ----------------------------ccCC-cceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCc
Q psy1413          63 ----------------------------VCLS-PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQ  112 (408)
Q Consensus        63 ----------------------------~~~~-~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~  112 (408)
                                                  .+.. .++..|+++++++.+.++.++.+++.+....... .+++++|.|+|+
T Consensus       109 ~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~  188 (361)
T cd08231         109 KCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGP  188 (361)
T ss_pred             ccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH
Confidence                                        1111 3444455444433333333433333221111222 578899999999


Q ss_pred             cccccccccccccC-c---------------------------------------------ceeEEEccCch---HHHHh
Q psy1413         113 IGDFRLSDPMIVGH-E---------------------------------------------ASGIVSKVGAK---VKHLK  143 (408)
Q Consensus       113 vG~~~i~~a~~~G~-~---------------------------------------------~~~vv~~~g~~---~~~~~  143 (408)
                      +|++++++++.+|+ .                                             ++.+++++|..   .++++
T Consensus       189 vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~  268 (361)
T cd08231         189 LGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLE  268 (361)
T ss_pred             HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHH
Confidence            99999888887775 2                                             23344454432   26789


Q ss_pred             hccCCcEEEEEccCCC--CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcC--CCCCCCceeeeeccchHHHHHHH
Q psy1413         144 ATRPGGCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASG--KVDVKKLITHNYLLEDTLHAFET  218 (408)
Q Consensus       144 ~l~~gG~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g--~~~~~~~i~~~~~l~~~~~a~~~  218 (408)
                      +++++|+++.+|....  ..+++...++++++++.+.+..+ ++++++++++.++  +++++++++++|+++|+++||+.
T Consensus       269 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~  348 (361)
T cd08231         269 LLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALEL  348 (361)
T ss_pred             HhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHH
Confidence            9999999999997643  44566667899999999998765 7899999999998  67788899999999999999999


Q ss_pred             HHcCCCCceEEEEE
Q psy1413         219 AKTGAGNAIKVMIH  232 (408)
Q Consensus       219 ~~~~~~~~~kvvi~  232 (408)
                      +.+++  .+|+++.
T Consensus       349 ~~~~~--~~k~vi~  360 (361)
T cd08231         349 AESGT--ALKVVID  360 (361)
T ss_pred             HHcCC--ceEEEeC
Confidence            98865  3688775

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=99.88  E-value=8.8e-22  Score=189.42  Aligned_cols=242  Identities=27%  Similarity=0.399  Sum_probs=189.8

Q ss_pred             eeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCC
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPG  148 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~g  148 (408)
                      +..+..+.+ +..++|.+.+..+++.+.++++++.++.+.- |...  ........|.++.|.+..+|+..+.++.    
T Consensus         6 ~~~~~~~~l-~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~-g~~~--~~~~~~~~G~e~~G~V~~vG~~v~~~~~----   77 (351)
T cd08285           6 MLGIGKVGW-IEKPIPVCGPNDAIVRPTAVAPCTSDVHTVW-GGAP--GERHGMILGHEAVGVVEEVGSEVKDFKP----   77 (351)
T ss_pred             EccCCccEE-EECCCCCCCCCeEEEEEEEEEechhhHHHhc-CCCC--CCCCCcccCcceEEEEEEecCCcCccCC----
Confidence            334444555 4556666677888899999999887765532 1111  1233567899999999999865433333    


Q ss_pred             cEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceE
Q psy1413         149 GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIK  228 (408)
Q Consensus       149 G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~k  228 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (351)
T cd08285          78 --------------------------------------------------------------------------------   77 (351)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEcCceeecCCCcccccccccCCcccccccee-ecc-cCCCCccceeEEeeccc--eeeeCCCCCCcccccccc-hhh
Q psy1413         229 VMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIF-FCA-TPPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALLE-PLS  303 (408)
Q Consensus       229 vvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~-~~~  303 (408)
                          +|+|...+..+|+.|..|..|+++.|.+.. .+. ....+|+|++|+.++.+  .++++|++++.++++.++ ++.
T Consensus        78 ----Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~  153 (351)
T cd08285          78 ----GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS  153 (351)
T ss_pred             ----CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence                899988777789999999999999998742 111 12347999999999974  899999999998888775 677


Q ss_pred             hhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413         304 VGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       304 ~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      ++++++....+++++++||+|+|++|+.++|+++.+|+.+++++++++++.+.++++|++.++++++    .+..+.+.+
T Consensus       154 ta~~~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~----~~~~~~i~~  229 (351)
T cd08285         154 TGFHGAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN----GDVVEQILK  229 (351)
T ss_pred             hHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC----CCHHHHHHH
Confidence            8888887788999999999977999999999999999987999999999999999999999999876    556667777


Q ss_pred             HhcCCCCceEEEcccchhhhhhc
Q psy1413         384 LLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       384 ~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      ++.++++|++|||+|+...+..+
T Consensus       230 ~~~~~~~d~vld~~g~~~~~~~~  252 (351)
T cd08285         230 LTGGKGVDAVIIAGGGQDTFEQA  252 (351)
T ss_pred             HhCCCCCcEEEECCCCHHHHHHH
Confidence            77778899999999986555443

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=99.88  E-value=4.6e-22  Score=189.40  Aligned_cols=226  Identities=26%  Similarity=0.357  Sum_probs=182.6

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ +..+.|.+.+.++++.+.++++++.++.+. .|...  .......+|.++.|++..+|+..+.++.         
T Consensus        14 ~l~~-~~~p~P~~~~~evlVkv~~~gi~~~D~~~~-~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~---------   80 (329)
T TIGR02822        14 PLRF-VERPVPRPGPGELLVRVRACGVCRTDLHVS-EGDLP--VHRPRVTPGHEVVGEVAGRGADAGGFAV---------   80 (329)
T ss_pred             CceE-EeCCCCCCCCCeEEEEEEEEeecchhHHHH-cCCCC--CCCCCccCCcceEEEEEEECCCCcccCC---------
Confidence            4666 567888888899999999999998876654 22211  1122456799999999999975444444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        81 -------------------------------------------------------------------------------G   81 (329)
T TIGR02822        81 -------------------------------------------------------------------------------G   81 (329)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecCC-CcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         234 DRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       234 ~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      |+|.+.+. .+|+.|..|..|++++|++..+.|. ..+|+|++|+.++++.++++|+++++++++.+. ...++++++.+
T Consensus        82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~  160 (329)
T TIGR02822        82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR  160 (329)
T ss_pred             CEEEEcCccCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh
Confidence            99987665 4799999999999999998776664 357999999999999999999999988887665 66778888877


Q ss_pred             cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ..+++++++||+|+|++|++++|+++.+|++ |++++++++|++.++++|+++++++.+    .          ..+++|
T Consensus       161 ~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~-vi~~~~~~~~~~~a~~~Ga~~vi~~~~----~----------~~~~~d  225 (329)
T TIGR02822       161 ASLPPGGRLGLYGFGGSAHLTAQVALAQGAT-VHVMTRGAAARRLALALGAASAGGAYD----T----------PPEPLD  225 (329)
T ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHhCCceeccccc----c----------Ccccce
Confidence            8899999999999999999999999999997 888999999999999999999988533    1          023689


Q ss_pred             eEEEcccchhhhhhcC
Q psy1413         392 KTIDCSGIESTIKLGM  407 (408)
Q Consensus       392 ~i~d~~g~~~~~~~~~  407 (408)
                      .++++++...+++.++
T Consensus       226 ~~i~~~~~~~~~~~~~  241 (329)
T TIGR02822       226 AAILFAPAGGLVPPAL  241 (329)
T ss_pred             EEEECCCcHHHHHHHH
Confidence            9999888777766543

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PRK10083 putative oxidoreductase; Provisional

Probab=99.88  E-value=1.1e-21  Score=187.96  Aligned_cols=239  Identities=29%  Similarity=0.536  Sum_probs=188.1

Q ss_pred             eeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCC
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPG  148 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~g  148 (408)
                      +..|+.+.+ ++.+.|.+.+..+++.+.++++++.++...- |...  ...+...+|.++.|++..+|+....++.    
T Consensus         6 ~~~~~~~~~-~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~----   77 (339)
T PRK10083          6 IEKPNSLAI-EERPIPQPAAGEVRVKVKLAGICGSDSHIYR-GHNP--FAKYPRVIGHEFFGVIDAVGEGVDAARI----   77 (339)
T ss_pred             EecCCeeEE-EeccCCCCCCCeEEEEEEEEEEcccchHHHc-CCCC--cCCCCcccccceEEEEEEECCCCccCCC----
Confidence            445666777 5667788888889999999999887765531 2111  1124567899999999999975433443    


Q ss_pred             cEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceE
Q psy1413         149 GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIK  228 (408)
Q Consensus       149 G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~k  228 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (339)
T PRK10083         78 --------------------------------------------------------------------------------   77 (339)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhh
Q psy1413         229 VMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHA  308 (408)
Q Consensus       229 vvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~  308 (408)
                          +|+|.+.+..+|+.|..|.++++++|....+.+.. .+|+|++|+.++++.++++|++++.+.++...++.+++..
T Consensus        78 ----Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~  152 (339)
T PRK10083         78 ----GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVH-RDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANV  152 (339)
T ss_pred             ----CCEEEEccccCCCCCccccCcCcccCCCCceEEEc-cCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHH
Confidence                89999999999999999999999999876554432 4699999999999999999999998877755567777766


Q ss_pred             hhccCcCCCCEEEEEecchhHHHHHHHHHH-hCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         309 CRRAGVTLGSKVLITGAGPIGLVTLLTARA-LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       309 ~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~-~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      .....++++++++|+|+|++|++++|+++. +|++.+++++++++|.+.++++|++.++++++    .++.+.+..  .+
T Consensus       153 ~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~----~~~~~~~~~--~g  226 (339)
T PRK10083        153 TGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ----EPLGEALEE--KG  226 (339)
T ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc----ccHHHHHhc--CC
Confidence            677788999999999999999999999996 69988888999999999999999999998765    445555532  13


Q ss_pred             CCCceEEEcccchhhhhhc
Q psy1413         388 EQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       388 ~~~d~i~d~~g~~~~~~~~  406 (408)
                      .++|++||++|....++.+
T Consensus       227 ~~~d~vid~~g~~~~~~~~  245 (339)
T PRK10083        227 IKPTLIIDAACHPSILEEA  245 (339)
T ss_pred             CCCCEEEECCCCHHHHHHH
Confidence            3567999999976555543

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.88  E-value=2.4e-21  Score=186.37  Aligned_cols=242  Identities=30%  Similarity=0.572  Sum_probs=191.5

Q ss_pred             eeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCcccccc-------ccccccccCcceeEEEccCchHH-
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFR-------LSDPMIVGHEASGIVSKVGAKVK-  140 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~-------i~~a~~~G~~~~~vv~~~g~~~~-  140 (408)
                      +..|..+.+ +..+.|.+.+..+++.+.+++++..++.+.- |......       ...+..+|.++.|++..+|...+ 
T Consensus         6 ~~~~~~~~~-~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~-g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~   83 (350)
T cd08256           6 CHGPQDYRL-EEVPVPRPGPGEILVKVEACGICAGDIKCYH-GAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEE   83 (350)
T ss_pred             EecCCceEE-EECCCCCCCCCeEEEEEEEEEEcccchhhhc-CCCccccccccCccCCCCcccCcceeEEEEEeCCCccc
Confidence            344556667 5667777888888999999999888776542 2110000       12344679999999999996533 


Q ss_pred             -HHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHH
Q psy1413         141 -HLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETA  219 (408)
Q Consensus       141 -~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~  219 (408)
                       .++.                                                                           
T Consensus        84 ~~~~~---------------------------------------------------------------------------   88 (350)
T cd08256          84 RGVKV---------------------------------------------------------------------------   88 (350)
T ss_pred             CCCCC---------------------------------------------------------------------------
Confidence             3343                                                                           


Q ss_pred             HcCCCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccC-CCCccceeEEeeccc-eeeeCCCCCCccccc
Q psy1413         220 KTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATP-PDHGNLSRYYRHAAD-FCHKLPDHVSLEEGA  297 (408)
Q Consensus       220 ~~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa  297 (408)
                                   +++|...+..+|+.|..|..+.++.|+....+|.. ...|+|++|+.++++ .++++|++++++.++
T Consensus        89 -------------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa  155 (350)
T cd08256          89 -------------GDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAI  155 (350)
T ss_pred             -------------CCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHh
Confidence                         89999888899999999999999999876554442 246999999999988 578999999988877


Q ss_pred             ccchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHH
Q psy1413         298 LLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEI  377 (408)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~  377 (408)
                      .+.++.++++++....++++++++|.|+|++|+.++|+++.+|++.++++++++++.+.++++|++.+++.+.    .+.
T Consensus       156 ~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~----~~~  231 (350)
T cd08256         156 LIEPLACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPE----VDV  231 (350)
T ss_pred             hhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCC----cCH
Confidence            6667778888887778899999999555999999999999999988888889999999999999999988765    566


Q ss_pred             HHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413         378 STHIIELLQGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       378 ~~~~~~~~~~~~~d~i~d~~g~~~~~~  404 (408)
                      .+.+.+.++++++|++||++|+...+.
T Consensus       232 ~~~~~~~~~~~~vdvvld~~g~~~~~~  258 (350)
T cd08256         232 VEKIKELTGGYGCDIYIEATGHPSAVE  258 (350)
T ss_pred             HHHHHHHhCCCCCCEEEECCCChHHHH
Confidence            667778887788999999999654443

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.88  E-value=1.7e-21  Score=188.41  Aligned_cols=244  Identities=50%  Similarity=0.901  Sum_probs=184.8

Q ss_pred             ccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcE
Q psy1413          71 RRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGC  150 (408)
Q Consensus        71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~  150 (408)
                      .+..+.+ +..+.|.+.+..+++.+.+++++..++.+.-....+......+..+|.++.|++..+|+....++.      
T Consensus        25 ~~~~l~~-~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~------   97 (364)
T PLN02702         25 GVNTLKI-QPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVV------   97 (364)
T ss_pred             cCCceEE-EeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCC------
Confidence            4455555 445556667788889999999988776654211112222223456799999999998864332333      


Q ss_pred             EEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         151 LVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       151 iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                                                                                                      
T Consensus        98 --------------------------------------------------------------------------------   97 (364)
T PLN02702         98 --------------------------------------------------------------------------------   97 (364)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhh
Q psy1413         231 IHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACR  310 (408)
Q Consensus       231 i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~  310 (408)
                        +|+|+..+..+|++|..|..|..+.|++..+++....+|+|++|+.++++.++++|+++++++++...+++++++++.
T Consensus        98 --Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~a~~~~~  175 (364)
T PLN02702         98 --GDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACR  175 (364)
T ss_pred             --CCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhhhHHHHHHHHHH
Confidence              899998888899999999999999998755455444579999999999999999999999888876455666777776


Q ss_pred             ccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH--hcCC
Q psy1413         311 RAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL--LQGE  388 (408)
Q Consensus       311 ~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~--~~~~  388 (408)
                      ...+.++++++|+|+|++|++++|+++.+|+++++++++++++.+.++++|++.++++...  ..++.+.+..+  +.++
T Consensus       176 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~  253 (364)
T PLN02702        176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTN--IEDVESEVEEIQKAMGG  253 (364)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcc--cccHHHHHHHHhhhcCC
Confidence            7788999999999779999999999999999988888889999999999999998875321  13445555544  2345


Q ss_pred             CCceEEEcccchhhhhh
Q psy1413         389 QPDKTIDCSGIESTIKL  405 (408)
Q Consensus       389 ~~d~i~d~~g~~~~~~~  405 (408)
                      ++|++|||+|+...+..
T Consensus       254 ~~d~vid~~g~~~~~~~  270 (364)
T PLN02702        254 GIDVSFDCVGFNKTMST  270 (364)
T ss_pred             CCCEEEECCCCHHHHHH
Confidence            89999999996555443

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=99.88  E-value=2.2e-22  Score=191.52  Aligned_cols=224  Identities=19%  Similarity=0.155  Sum_probs=163.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCC-CCCCCEEEEcc-------CcccccCCcceecc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH-LKVDNQTRFVP-------EFRNVCLSPILRRR   72 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~-~~vGdrV~~~~-------~~~~~~~~~~~~~p   72 (408)
                      |+++|||++|++.+ .|.++ ....+|.++|||++|+|+++|++|++ |++||||...+       ++...+...++..|
T Consensus        37 v~~~gi~~~d~~~~-~g~~~-~~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP  114 (324)
T cd08291          37 VEAAPINPSDLGFL-KGQYG-STKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLP  114 (324)
T ss_pred             EEEccCCHHHHHHh-cCcCC-CCCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCCCCCcchheeeecHHHeEECC
Confidence            46899999999987 44322 12357899999999999999999996 99999998653       34456666788889


Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEE--ccCccccccccccccccCc-----------------------
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYL--THGQIGDFRLSDPMIVGHE-----------------------  127 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~--g~G~vG~~~i~~a~~~G~~-----------------------  127 (408)
                      +++++++.+.++....+++.. .......+++++|+  |+|++|++++|+++.+|+.                       
T Consensus       115 ~~~~~~~aa~~~~~~~ta~~~-~~~~~~~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i  193 (324)
T cd08291         115 DGVSFEQGASSFVNPLTALGM-LETAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVL  193 (324)
T ss_pred             CCCCHHHHhhhcccHHHHHHH-HHhhccCCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEE
Confidence            988886555555544444311 11222356667774  6899999999998877762                       


Q ss_pred             -------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-Cc-ccCHHHHHhcCcEEEEeecCC--
Q psy1413         128 -------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DV-KIPLVLTMTKEIDIRGVFRYA--  182 (408)
Q Consensus       128 -------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~-~~~~~~~~~~~~~l~g~~~~~--  182 (408)
                                         ++.+++++|...  +.+++++++|+++.+|.... .. .++...++.+++++.+++...  
T Consensus       194 ~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (324)
T cd08291         194 NSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWL  273 (324)
T ss_pred             ECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhh
Confidence                               344555555432  56889999999999996543 22 366777889999999987432  


Q ss_pred             -----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         183 -----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       183 -----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                           +++++++++++ +++  +++++++|+|+|+.+||+.+.+++. .+|+++
T Consensus       274 ~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~-~Gkvv~  323 (324)
T cd08291         274 QKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMS-TGKKLL  323 (324)
T ss_pred             cccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCC-CCeEEe
Confidence                 35778888887 654  5689999999999999999998764 456664

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.87  E-value=2.8e-21  Score=185.02  Aligned_cols=231  Identities=23%  Similarity=0.238  Sum_probs=175.6

Q ss_pred             CCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccc--cccccccccCcceeEEEccCchHHHH
Q psy1413          65 LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF--RLSDPMIVGHEASGIVSKVGAKVKHL  142 (408)
Q Consensus        65 ~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~--~i~~a~~~G~~~~~vv~~~g~~~~~~  142 (408)
                      ...++..|+.+.+ ++.++|. .+.++++.+.++++|+.++.+.. |.....  ...++..+|+|+.|+|+..|..  .+
T Consensus         4 ~~~~~~~~~~~~~-~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~-G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~   78 (341)
T cd08237           4 QVYRLVRPKFFEV-TYEEENL-REDWVIVRPTYLSICHADQRYYQ-GNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY   78 (341)
T ss_pred             cceEEeccceEEE-eecCCCC-CCCeEEEEEEEEEEcCccHHHHc-CCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence            3456677888888 6677785 77899999999999999987753 211110  1246778999999999997752  24


Q ss_pred             hhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcC
Q psy1413         143 KATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTG  222 (408)
Q Consensus       143 ~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~  222 (408)
                      +.                                                                              
T Consensus        79 ~v------------------------------------------------------------------------------   80 (341)
T cd08237          79 KV------------------------------------------------------------------------------   80 (341)
T ss_pred             CC------------------------------------------------------------------------------
Confidence            43                                                                              


Q ss_pred             CCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchh
Q psy1413         223 AGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPL  302 (408)
Q Consensus       223 ~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~  302 (408)
                                +|+|.+.+..+|+.| .|  +..++|.+..+.+.. .+|+|+||+.++++.++++|+++++++++++.++
T Consensus        81 ----------GdrV~~~~~~~~~~~-~~--~~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~  146 (341)
T cd08237          81 ----------GTKVVMVPNTPVEKD-EI--IPENYLPSSRFRSSG-YDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELV  146 (341)
T ss_pred             ----------CCEEEECCCCCchhc-cc--chhccCCCcceeEec-CCCceEEEEEEchHHeEECCCCCChHHhhhhchH
Confidence                      999998887777744 45  356788776665543 4799999999999999999999999988888888


Q ss_pred             hhhhhhhh---ccCcCCCCEEEEEecchhHHHHHHHHHH-hCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHH
Q psy1413         303 SVGVHACR---RAGVTLGSKVLITGAGPIGLVTLLTARA-LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       303 ~~~~~~~~---~~~~~~~~~~lv~G~G~~G~~~~~~~~~-~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                      +++++++.   ....++++++||+|+|++|+.++|+++. +|+.+|++++++++|++.+++.+++..++        ++ 
T Consensus       147 ~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~--------~~-  217 (341)
T cd08237         147 SVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID--------DI-  217 (341)
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh--------hh-
Confidence            89998873   3446889999999999999999999996 67777999999999999998766654321        11 


Q ss_pred             HHHHHHhcCCCCceEEEcccc---hhhhhhcC
Q psy1413         379 THIIELLQGEQPDKTIDCSGI---ESTIKLGM  407 (408)
Q Consensus       379 ~~~~~~~~~~~~d~i~d~~g~---~~~~~~~~  407 (408)
                            +...++|++||++|+   +.+++.++
T Consensus       218 ------~~~~g~d~viD~~G~~~~~~~~~~~~  243 (341)
T cd08237         218 ------PEDLAVDHAFECVGGRGSQSAINQII  243 (341)
T ss_pred             ------hhccCCcEEEECCCCCccHHHHHHHH
Confidence                  112369999999994   34555543

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.87  E-value=1.5e-21  Score=189.93  Aligned_cols=228  Identities=25%  Similarity=0.364  Sum_probs=169.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      +.+++||++|++.+ .|.+..  .++|.++|||++|+|+++|++++++++||+|+..+..                    
T Consensus        32 v~~~~i~~~d~~~~-~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~  108 (386)
T cd08283          32 VTATAICGSDLHLY-HGYIPG--MKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTN  108 (386)
T ss_pred             EEEEecchhhhhhh-cCCCCC--CCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcc
Confidence            45899999999998 443322  3578999999999999999999999999999875311                    


Q ss_pred             ---------------------------------ccccCC--cceeccceeeecccccCCCCCCcceEEEEeeeee-cCCe
Q psy1413          61 ---------------------------------RNVCLS--PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSD  104 (408)
Q Consensus        61 ---------------------------------~~~~~~--~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~  104 (408)
                                                       ......  .++..|+++++++.+.++....+++.+. ....+ .+++
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~  187 (386)
T cd08283         109 PSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDT  187 (386)
T ss_pred             cccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCE
Confidence                                             111112  4566677777655555666655555332 22222 4778


Q ss_pred             EEEEccCccccccccccccccC--------------------------------------------cceeEEEccCch--
Q psy1413         105 VHYLTHGQIGDFRLSDPMIVGH--------------------------------------------EASGIVSKVGAK--  138 (408)
Q Consensus       105 vlv~g~G~vG~~~i~~a~~~G~--------------------------------------------~~~~vv~~~g~~--  138 (408)
                      ++|+|+|.+|++++++++..|.                                            .++.+++++|..  
T Consensus       188 VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~  267 (386)
T cd08283         188 VAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAH  267 (386)
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCccc
Confidence            9999999999888877766653                                            134455555421  


Q ss_pred             ----------------------HHHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHc
Q psy1413         139 ----------------------VKHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVAS  194 (408)
Q Consensus       139 ----------------------~~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~  194 (408)
                                            .+.+++++++|+++.+|.... ...++...++.+++++.+..... +.++++++++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~  347 (386)
T cd08283         268 GSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIES  347 (386)
T ss_pred             ccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHc
Confidence                                  257889999999999997654 34556667789999999976554 679999999999


Q ss_pred             CCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         195 GKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       195 g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +++++.+++++.|+++|+.+||+.+.+++...+|++++
T Consensus       348 g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         348 GELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             CCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence            99998878899999999999999999887778899885

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=99.86  E-value=2.1e-21  Score=186.77  Aligned_cols=228  Identities=23%  Similarity=0.252  Sum_probs=161.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      |+++|||++|++.+. +..  ....+|.++|||++|+|+++|++++++++||+|+..+..                    
T Consensus        31 v~a~~i~~~d~~~~~-g~~--~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~  107 (351)
T cd08285          31 PTAVAPCTSDVHTVW-GGA--PGERHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGML  107 (351)
T ss_pred             EEEEEechhhHHHhc-CCC--CCCCCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCC
Confidence            468999999999874 322  123568999999999999999999999999999874321                    


Q ss_pred             ----------------ccccC--CcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccc
Q psy1413          61 ----------------RNVCL--SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDP  121 (408)
Q Consensus        61 ----------------~~~~~--~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a  121 (408)
                                      ...+.  ..++..|+++++++.+.++.++.+++.+ .....+ .+++++|.|+|++|+++++++
T Consensus       108 ~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~la  186 (351)
T cd08285         108 GGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGA  186 (351)
T ss_pred             CCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHH
Confidence                            11111  1344455555554444444444444322 111222 478899999999999999888


Q ss_pred             ccccC-------------------------------------------cceeEEEccCch---HHHHhhccCCcEEEEEc
Q psy1413         122 MIVGH-------------------------------------------EASGIVSKVGAK---VKHLKATRPGGCLVIVG  155 (408)
Q Consensus       122 ~~~G~-------------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G  155 (408)
                      +.+|.                                           .++.+++++|..   .+.+++++++|+++.+|
T Consensus       187 k~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  266 (351)
T cd08285         187 RLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVN  266 (351)
T ss_pred             HHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEec
Confidence            87765                                           134455555543   26789999999999999


Q ss_pred             cCCCC--cccCH--HHHHhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCc-eeeeeccchHHHHHHHHHcCCCCceE
Q psy1413         156 AGSQD--VKIPL--VLTMTKEIDIRGVFRY--ANDYPIALAMVASGKVDVKKL-ITHNYLLEDTLHAFETAKTGAGNAIK  228 (408)
Q Consensus       156 ~~~~~--~~~~~--~~~~~~~~~l~g~~~~--~~~~~~~~~l~~~g~~~~~~~-i~~~~~l~~~~~a~~~~~~~~~~~~k  228 (408)
                      .....  ..++.  .....+..++.+.+..  .++++++++++++|++++..+ ++++|+|+|+++|++.+.+++...+|
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k  346 (351)
T cd08285         267 YYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIK  346 (351)
T ss_pred             ccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEE
Confidence            76643  33442  2234667778776643  378999999999999998554 45679999999999999999888899


Q ss_pred             EEEE
Q psy1413         229 VMIH  232 (408)
Q Consensus       229 vvi~  232 (408)
                      ++++
T Consensus       347 ~~~~  350 (351)
T cd08285         347 PVII  350 (351)
T ss_pred             EEEe
Confidence            9875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.86  E-value=8.9e-21  Score=183.33  Aligned_cols=237  Identities=28%  Similarity=0.444  Sum_probs=186.1

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ +..++|.+.+..+++.+...++++.++.+.- |...   -......|.++.|++..+|.....++.         
T Consensus        12 ~~~~-~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~-g~~~---~~~~~i~g~e~~G~V~~vG~~v~~~~~---------   77 (365)
T cd05279          12 PLSI-EEIEVAPPKAGEVRIKVVATGVCHTDLHVID-GKLP---TPLPVILGHEGAGIVESIGPGVTTLKP---------   77 (365)
T ss_pred             CcEE-EEeecCCCCCCeEEEEEEEeeecchhHHHhc-CCCC---CCCCcccccceeEEEEEeCCCcccCCC---------
Confidence            4566 5667787788888899999999887766542 1111   122346789999999999865332332         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        78 -------------------------------------------------------------------------------G   78 (365)
T cd05279          78 -------------------------------------------------------------------------------G   78 (365)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecCCCcccccccccCCccccccceeecccCC--------------------CCccceeEEeeccceeeeCCCCCCc
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPP--------------------DHGNLSRYYRHAADFCHKLPDHVSL  293 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~~~~~~~~~~~~~~p~~~~~  293 (408)
                      |+|+..+..+|+.|.+|..+.++.|+....++...                    ..|+|++|..++++.++++|+++++
T Consensus        79 d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~  158 (365)
T cd05279          79 DKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL  158 (365)
T ss_pred             CEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence            88888777889999999999999998766543111                    2478999999999999999999999


Q ss_pred             ccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCC
Q psy1413         294 EEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRN  371 (408)
Q Consensus       294 ~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~  371 (408)
                      ++++.+. .+.++++++ ....+++++++||+|+|++|+.++|+++.+|++.++++++++++.+.++++|++++++.++.
T Consensus       159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~  238 (365)
T cd05279         159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ  238 (365)
T ss_pred             HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence            8888777 677788776 56788999999999779999999999999999878888889999999999999999987651


Q ss_pred             CChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         372 HSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                        .++..+.++++++ +++|++||++|....++.+
T Consensus       239 --~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~  270 (365)
T cd05279         239 --DKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQA  270 (365)
T ss_pred             --cchHHHHHHHHhC-CCCcEEEECCCCHHHHHHH
Confidence              1266777888774 6899999999875555443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>KOG1197|consensus

Probab=99.86  E-value=2.3e-21  Score=167.33  Aligned_cols=208  Identities=25%  Similarity=0.331  Sum_probs=174.0

Q ss_pred             eeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccc-cccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF-RLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~-~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      +.+++-+.+ +..++|.+.+.+......+++++--++. +..   |+. ...++...|.|+.|++.++|...+..+.   
T Consensus        17 ~Ggydvlk~-ed~pv~~papgel~iknka~GlNfid~y-~Rk---GlY~~~plPytpGmEaaGvVvAvG~gvtdrkv---   88 (336)
T KOG1197|consen   17 FGGYDVLKL-EDRPVPPPAPGELTIKNKACGLNFIDLY-FRK---GLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKV---   88 (336)
T ss_pred             cCCcceEEE-eeecCCCCCCCceEEeehhcCccHHHHH-Hhc---cccCCCCCCcCCCcccceEEEEecCCcccccc---
Confidence            345788888 8899999999988888888887533221 111   233 4456778899999999999987555554   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        89 --------------------------------------------------------------------------------   88 (336)
T KOG1197|consen   89 --------------------------------------------------------------------------------   88 (336)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhh
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGV  306 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~  306 (408)
                           +|+|+.-                            ...|.|+++..+|...++++|+.+++.++|.+. ...|++
T Consensus        89 -----GDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy  135 (336)
T KOG1197|consen   89 -----GDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAY  135 (336)
T ss_pred             -----ccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHH
Confidence                 8888641                            257999999999999999999999998887655 667777


Q ss_pred             hhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413         307 HAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       307 ~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      .-+ +...+++++++||+.+ ||+|+.+.||++..|+. +|++.++.+|.+.+++.|+.+.|+++.    +|+.++++++
T Consensus       136 ~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~-tI~~asTaeK~~~akenG~~h~I~y~~----eD~v~~V~ki  210 (336)
T KOG1197|consen  136 MLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAH-TIATASTAEKHEIAKENGAEHPIDYST----EDYVDEVKKI  210 (336)
T ss_pred             HHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcE-EEEEeccHHHHHHHHhcCCcceeeccc----hhHHHHHHhc
Confidence            776 5688999999999988 99999999999999996 888889999999999999999999998    9999999999


Q ss_pred             hcCCCCceEEEcccchhh
Q psy1413         385 LQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       385 ~~~~~~d~i~d~~g~~~~  402 (408)
                      |+++|+|+++|.+|.+.+
T Consensus       211 TngKGVd~vyDsvG~dt~  228 (336)
T KOG1197|consen  211 TNGKGVDAVYDSVGKDTF  228 (336)
T ss_pred             cCCCCceeeeccccchhh
Confidence            999999999999997654

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.86  E-value=1.2e-20  Score=180.86  Aligned_cols=237  Identities=33%  Similarity=0.555  Sum_probs=185.4

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.. ...+.|.+.+.+++++..+++++..++.+.-.+.........+...|.++.|.+..+|+....++.         
T Consensus        12 ~~~~-~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~---------   81 (341)
T PRK05396         12 GLWL-TDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKV---------   81 (341)
T ss_pred             ceEE-EECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCC---------
Confidence            4555 556777788888899999999987776653211111112234456789999999999865333333         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        82 -------------------------------------------------------------------------------G   82 (341)
T PRK05396         82 -------------------------------------------------------------------------------G   82 (341)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccC
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAG  313 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~  313 (408)
                      ++|...+..+|+.|..|..+++++|.+..+.+. ..+|+|++|+.++++.++++|+++++++++.+.++.+++++... .
T Consensus        83 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~~~~~~-~  160 (341)
T PRK05396         83 DRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGV-NRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALS-F  160 (341)
T ss_pred             CEEEECCCCCCCCChhhhCcChhhCCCcceeee-cCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHHHHHHc-C
Confidence            888888888999999999999999988655443 35799999999999999999999998887766666666665432 2


Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      ..++++++|.|+|++|++++|+++.+|+++|+++++++++.+.++++|++.++++++    .+..+.+++++.++++|.+
T Consensus       161 ~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~----~~~~~~~~~~~~~~~~d~v  236 (341)
T PRK05396        161 DLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK----EDLRDVMAELGMTEGFDVG  236 (341)
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc----ccHHHHHHHhcCCCCCCEE
Confidence            458899999877999999999999999987888888899999999999999998876    5677778888878899999


Q ss_pred             EEcccchhhhhh
Q psy1413         394 IDCSGIESTIKL  405 (408)
Q Consensus       394 ~d~~g~~~~~~~  405 (408)
                      |||+|+...+..
T Consensus       237 ~d~~g~~~~~~~  248 (341)
T PRK05396        237 LEMSGAPSAFRQ  248 (341)
T ss_pred             EECCCCHHHHHH
Confidence            999987655443

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=99.86  E-value=1.4e-20  Score=178.99  Aligned_cols=126  Identities=21%  Similarity=0.232  Sum_probs=108.1

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      |+|++|..+++..++++|++++.++++.++ ...++++++....+++++++||+|+ |.+|++++|+|+.+|++ ++++.
T Consensus        93 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~  171 (324)
T cd08292          93 GTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGIN-VINLV  171 (324)
T ss_pred             CcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEe
Confidence            346788888888999999999998888766 4566777777778899999999998 99999999999999997 77777


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      +++++.+.++++|++.+++.++    .+..+.+++++.++++|++|||+|+..
T Consensus       172 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~i~~~~~~~~~d~v~d~~g~~~  220 (324)
T cd08292         172 RRDAGVAELRALGIGPVVSTEQ----PGWQDKVREAAGGAPISVALDSVGGKL  220 (324)
T ss_pred             cCHHHHHHHHhcCCCEEEcCCC----chHHHHHHHHhCCCCCcEEEECCCChh
Confidence            8888888888899999998876    677788889998889999999999754

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=99.85  E-value=1.5e-20  Score=179.96  Aligned_cols=230  Identities=30%  Similarity=0.521  Sum_probs=183.4

Q ss_pred             cccCCCCCCcceEEEEeeeeecCCeEEEEccCcccc-ccccccccccCcceeEEEccCchHHHHhhccCCcEEEEEccCC
Q psy1413          80 QKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGS  158 (408)
Q Consensus        80 ~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~-~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~~  158 (408)
                      ..+.|.+.+..+.+.+...+++..++.+. .|.... .....+...|.++.|.+..+|+....++.              
T Consensus        17 ~~~~~~~~~~~v~v~v~~~~i~~~d~~~~-~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~--------------   81 (340)
T cd05284          17 DVPVPEPGPGQVLVRVGGAGVCHSDLHVI-DGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKE--------------   81 (340)
T ss_pred             eCCCCCCCCCeEEEEEEEEeecchhHHHH-cCCCcccccCCCCeecccceeEEEEEeCCCCCcCcC--------------
Confidence            34556666777888888888887766553 121111 11233456789999999998865333333              


Q ss_pred             CCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceee
Q psy1413         159 QDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAI  238 (408)
Q Consensus       159 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~  238 (408)
                                                                                                +|+|..
T Consensus        82 --------------------------------------------------------------------------Gd~V~~   87 (340)
T cd05284          82 --------------------------------------------------------------------------GDPVVV   87 (340)
T ss_pred             --------------------------------------------------------------------------CCEEEE
Confidence                                                                                      899988


Q ss_pred             cCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc--cCcC
Q psy1413         239 EPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR--AGVT  315 (408)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~--~~~~  315 (408)
                      .+..+|+.|..|..|.+++|...++.+. ..+|+|++|+.++++.++++|++++.++++.++ .+.++++++..  ..+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~  166 (340)
T cd05284          88 HPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLD  166 (340)
T ss_pred             cCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCC
Confidence            8888999999999999999999998877 468999999999999999999999998888777 67788888744  3578


Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      +++++||+|+|++|+.++|+++.+|+.+|+.+++++++.+.++++|++++++++.    . ..+.+++++.+.++|+++|
T Consensus       167 ~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~-~~~~i~~~~~~~~~dvvld  241 (340)
T cd05284         167 PGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASD----D-VVEEVRELTGGRGADAVID  241 (340)
T ss_pred             CCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCc----c-HHHHHHHHhCCCCCCEEEE
Confidence            8999999999779999999999999444888888999999999999999998876    4 6667788777778999999


Q ss_pred             cccchhhhh
Q psy1413         396 CSGIESTIK  404 (408)
Q Consensus       396 ~~g~~~~~~  404 (408)
                      |+|+...++
T Consensus       242 ~~g~~~~~~  250 (340)
T cd05284         242 FVGSDETLA  250 (340)
T ss_pred             cCCCHHHHH
Confidence            999754443

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.85  E-value=2.2e-20  Score=182.48  Aligned_cols=236  Identities=24%  Similarity=0.270  Sum_probs=184.6

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccc-------cccccccCcceeEEEccCchHHHHhhccC
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRL-------SDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i-------~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      +.. +..++|.+....+++.+..++++..++.+.-...+.....       .....+|.++.|.+..+|...+.++.   
T Consensus        30 ~~~-~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~---  105 (393)
T cd08246          30 IQL-EDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKV---  105 (393)
T ss_pred             eEE-eecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCC---
Confidence            445 4556777777888889999999877766532112211100       01125688999999988864332333   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus       106 --------------------------------------------------------------------------------  105 (393)
T cd08246         106 --------------------------------------------------------------------------------  105 (393)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhh
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGV  306 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~  306 (408)
                           +++|...+...|+.|..|..+.+++|....++|....+|+|++|..+++..++++|++++.++++.+. .+.+++
T Consensus       106 -----Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~  180 (393)
T cd08246         106 -----GDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAY  180 (393)
T ss_pred             -----CCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHH
Confidence                 88988888888999999999999999988888877678999999999999999999999988877665 778888


Q ss_pred             hhhhc---cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCC----------
Q psy1413         307 HACRR---AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNH----------  372 (408)
Q Consensus       307 ~~~~~---~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~----------  372 (408)
                      +++..   ..++++++++|+|+ |++|++++++++.+|++ ++++++++++.+.++++|++.++++++..          
T Consensus       181 ~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~-vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~  259 (393)
T cd08246         181 RMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGAN-PVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNS  259 (393)
T ss_pred             HHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccc
Confidence            88743   57889999999998 99999999999999998 66778899999999999999999875421          


Q ss_pred             --------ChHHHHHHHHHHhcCC-CCceEEEcccch
Q psy1413         373 --------SLEEISTHIIELLQGE-QPDKTIDCSGIE  400 (408)
Q Consensus       373 --------~~~~~~~~~~~~~~~~-~~d~i~d~~g~~  400 (408)
                              ....+.+.+.+++.++ ++|++|||+|+.
T Consensus       260 ~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~  296 (393)
T cd08246         260 EAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA  296 (393)
T ss_pred             hhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH
Confidence                    0113567788888877 899999999873

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=99.85  E-value=1.8e-20  Score=181.12  Aligned_cols=232  Identities=28%  Similarity=0.480  Sum_probs=180.9

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.. +..++|.+.+..+++.+.+++++..++.+.- |   ..........|.++.|++..+|+..+.++.          
T Consensus        15 ~~~-~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~-g---~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~----------   79 (365)
T cd08278          15 FVL-EDVELDDPRPDEVLVRIVATGICHTDLVVRD-G---GLPTPLPAVLGHEGAGVVEAVGSAVTGLKP----------   79 (365)
T ss_pred             ceE-EEeecCCCCCCeEEEEEEEeecCcccHHHhc-C---CCCCCCCcccccceeEEEEEeCCCcccCCC----------
Confidence            444 4566677777888889999999887766542 1   111223446789999999999865333333          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    +|
T Consensus        80 ------------------------------------------------------------------------------Gd   81 (365)
T cd08278          80 ------------------------------------------------------------------------------GD   81 (365)
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          88


Q ss_pred             ceeecCCCcccccccccCCccccccceeec---cc-------------------CCCCccceeEEeeccceeeeCCCCCC
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---AT-------------------PPDHGNLSRYYRHAADFCHKLPDHVS  292 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~~g~~~~~~~~~~~~~~~~p~~~~  292 (408)
                      +|...+ .+|+.|.+|..++.++|.+....   +.                   ....|+|++|+.++++.++++|++++
T Consensus        82 ~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s  160 (365)
T cd08278          82 HVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVP  160 (365)
T ss_pred             EEEEcc-cCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCC
Confidence            988866 48999999999999999764321   10                   11258999999999999999999999


Q ss_pred             cccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       293 ~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      .++++.++ ...++++++ ....++++++++|+|+|++|+.++|+++.+|++++++++++++|.+.++++|++.++++++
T Consensus       161 ~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~  240 (365)
T cd08278         161 LELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKE  240 (365)
T ss_pred             HHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCC
Confidence            88887776 556667765 5567889999999977999999999999999988999999999999999999999998866


Q ss_pred             CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                          .+..+.+++.+ ++++|+++||+|....++.
T Consensus       241 ----~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~  270 (365)
T cd08278         241 ----EDLVAAIREIT-GGGVDYALDTTGVPAVIEQ  270 (365)
T ss_pred             ----cCHHHHHHHHh-CCCCcEEEECCCCcHHHHH
Confidence                55666777777 7789999999987655443

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.85  E-value=5.6e-22  Score=184.64  Aligned_cols=184  Identities=18%  Similarity=0.213  Sum_probs=129.1

Q ss_pred             cccCCccEEEEEeCCCCC------CCCCCCEEEEccCcccccCCcceec--------------------------cceee
Q psy1413          29 IVGHEASGIVSKVGAKVK------HLKVDNQTRFVPEFRNVCLSPILRR--------------------------RFSLR   76 (408)
Q Consensus        29 i~GhE~~G~Vv~vG~~v~------~~~vGdrV~~~~~~~~~~~~~~~~~--------------------------p~~~~   76 (408)
                      ++|||++|+|+++|++|+      ++++||||++.+...|..+..|..+                          .+++.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            579999999999999999      8999999987654332211111110                          11112


Q ss_pred             ecc---cccCCCCCCcceEEE------------EeeeeecCCeEEEEccCccccccccccccccC---------------
Q psy1413          77 FRE---QKPIEDPDDHEVLLE------------MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH---------------  126 (408)
Q Consensus        77 ~~~---~~~lp~~~~~~~~~~------------~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~---------------  126 (408)
                      .++   ..++|...+.+..+.            .......+++++|+|+|++|++++|+++.+|+               
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            211   122232211111000            00111257899999999999999988887765               


Q ss_pred             --------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCC--CCcccCHHHHHhcCcEE
Q psy1413         127 --------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGS--QDVKIPLVLTMTKEIDI  175 (408)
Q Consensus       127 --------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l  175 (408)
                                                .++.+++++|...   +++++++++|+++.+|...  .+.+++...+++|++++
T Consensus       161 a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~~i  240 (280)
T TIGR03366       161 ALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWLTI  240 (280)
T ss_pred             HHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCcEE
Confidence                                      1345666666432   6799999999999999653  45688888999999999


Q ss_pred             EEeecCC-CcHHHHHHHHHc--CCCCCCCceeeeeccchH
Q psy1413         176 RGVFRYA-NDYPIALAMVAS--GKVDVKKLITHNYLLEDT  212 (408)
Q Consensus       176 ~g~~~~~-~~~~~~~~l~~~--g~~~~~~~i~~~~~l~~~  212 (408)
                      .|++..+ ++++++++++.+  ++++++++++|+|||+|+
T Consensus       241 ~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       241 RGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             EecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            9998876 789999999998  478888999999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08293 PTGR2 Prostaglandin reductase

Probab=99.85  E-value=1.9e-20  Score=179.75  Aligned_cols=123  Identities=24%  Similarity=0.268  Sum_probs=97.5

Q ss_pred             eeEEeeccceeeeCCCCCCccc-----ccccchhhhhhhhh-hccCcCCC--CEEEEEec-chhHHHHHHHHHHhCCCeE
Q psy1413         274 SRYYRHAADFCHKLPDHVSLEE-----GALLEPLSVGVHAC-RRAGVTLG--SKVLITGA-GPIGLVTLLTARALGASRV  344 (408)
Q Consensus       274 ~~~~~~~~~~~~~~p~~~~~~~-----aa~~~~~~~~~~~~-~~~~~~~~--~~~lv~G~-G~~G~~~~~~~~~~Ga~~v  344 (408)
                      ++|+.++++.++++|++++.++     ++...+..++++++ ....++++  +++||+|+ |++|++++|+++.+|+++|
T Consensus       104 ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~V  183 (345)
T cd08293         104 QTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRV  183 (345)
T ss_pred             eeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEE
Confidence            3456666677888888754332     23333677888887 45567776  89999998 9999999999999999669


Q ss_pred             EEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         345 VITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       345 v~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      +++++++++.+.+++ +|++.++++++    +++.+.++++++ +++|++||++|+..
T Consensus       184 i~~~~s~~~~~~~~~~lGa~~vi~~~~----~~~~~~i~~~~~-~gvd~vid~~g~~~  236 (345)
T cd08293         184 VGICGSDEKCQLLKSELGFDAAINYKT----DNVAERLRELCP-EGVDVYFDNVGGEI  236 (345)
T ss_pred             EEEcCCHHHHHHHHHhcCCcEEEECCC----CCHHHHHHHHCC-CCceEEEECCCcHH
Confidence            999899999988866 99999999876    667778888875 78999999999764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.85  E-value=1.1e-20  Score=181.46  Aligned_cols=229  Identities=24%  Similarity=0.341  Sum_probs=165.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |++++||++|++.+. |.+.  ...+|.++|||++|+|+++|++++.+++||||+..+...                   
T Consensus        32 v~a~~i~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (345)
T cd08286          32 MLKTTICGTDLHILK-GDVP--TVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGG  108 (345)
T ss_pred             EEEeeecchhhHHHc-CCCC--CCCCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcc
Confidence            468999999999884 4322  234588999999999999999999999999998754211                   


Q ss_pred             ---------------cccCC--cceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCcccccccccccc
Q psy1413          62 ---------------NVCLS--PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMI  123 (408)
Q Consensus        62 ---------------~~~~~--~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~  123 (408)
                                     ....+  .++..|+++...+.+.++....+++........ ..+++++|.|+|.+|++++++++.
T Consensus       109 ~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~  188 (345)
T cd08286         109 WILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQL  188 (345)
T ss_pred             cccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence                           11222  445555555554444444444444321111112 247889998999999999999888


Q ss_pred             cc-Cc------------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEccC
Q psy1413         124 VG-HE------------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVGAG  157 (408)
Q Consensus       124 ~G-~~------------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~  157 (408)
                      +| ..                                          ++.+++++|...   ..+++++++|+++.+|..
T Consensus       189 ~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~  268 (345)
T cd08286         189 YSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVH  268 (345)
T ss_pred             cCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEeccc
Confidence            87 31                                          233444444321   345899999999999977


Q ss_pred             CCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcC-CCCceEEEEE
Q psy1413         158 SQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTG-AGNAIKVMIH  232 (408)
Q Consensus       158 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~-~~~~~kvvi~  232 (408)
                      ..+..++...++.+++++.+.......+++++++++++.+++.++++++|++++++++++.+... +.+..|++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~  344 (345)
T cd08286         269 GKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIID  344 (345)
T ss_pred             CCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEe
Confidence            66667777777889999988655446789999999999998888899999999999999999876 3366888875

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.85  E-value=5.7e-21  Score=184.70  Aligned_cols=229  Identities=36%  Similarity=0.598  Sum_probs=156.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccC---------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCL---------------   65 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~---------------   65 (408)
                      |+++|||++|++.+.....+.+...+|.++|||++|+|+++|++++.|++||+|++.+...+.++               
T Consensus        48 v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~  127 (364)
T PLN02702         48 MKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMK  127 (364)
T ss_pred             EEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCcc
Confidence            46899999999987432212233346889999999999999999999999999987543322111               


Q ss_pred             -------------------CcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          66 -------------------SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        66 -------------------~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                         ..++..|+++++.+.+ ...++..++... ....+ .+++++|+|+|++|++++++++.+|
T Consensus       128 ~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G  205 (364)
T PLN02702        128 FFATPPVHGSLANQVVHPADLCFKLPENVSLEEGA-MCEPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFG  205 (364)
T ss_pred             ccCCCCCCCcccceEEcchHHeEECCCCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                               1223334444332111 111111111100 01111 4778999999999998888877666


Q ss_pred             Cc-----------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEc
Q psy1413         126 HE-----------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVG  155 (408)
Q Consensus       126 ~~-----------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G  155 (408)
                      +.                                               ++.+++++|..   .+++++++++|+++.+|
T Consensus       206 ~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
T PLN02702        206 APRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVG  285 (364)
T ss_pred             CCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEc
Confidence            42                                               23344444422   26789999999999999


Q ss_pred             cCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeecc--chHHHHHHHHHcCCCCceEEEEE
Q psy1413         156 AGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLL--EDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .......++...+.++++++.+.+.....++++++++++++++++++++++|++  +++++||+.+.+++ ..+|+++.
T Consensus       286 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~-~~~kvv~~  363 (364)
T PLN02702        286 MGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGG-NAIKVMFN  363 (364)
T ss_pred             cCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCC-CceEEEEe
Confidence            754445556677889999999988766788999999999999877778999665  89999999988764 45677763

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.84  E-value=2.8e-20  Score=181.01  Aligned_cols=236  Identities=32%  Similarity=0.526  Sum_probs=185.1

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEcc---Ccccc-ccccccccccCcceeEEEccCchHHHHhhccCCc
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTH---GQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGG  149 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~---G~vG~-~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG  149 (408)
                      .+.+ +..++|.+.+..+.+.+.+++++..++.+.-.   +.... ....+...+|.++.|++..+|+..+.++.     
T Consensus        38 ~~~~-~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~-----  111 (384)
T cd08265          38 ELRV-EDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEK-----  111 (384)
T ss_pred             CEEE-EECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCC-----
Confidence            4666 66678888888889999999998777655321   11000 01123456788999999999864333333     


Q ss_pred             EEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEE
Q psy1413         150 CLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV  229 (408)
Q Consensus       150 ~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kv  229 (408)
                                                                                                      
T Consensus       112 --------------------------------------------------------------------------------  111 (384)
T cd08265         112 --------------------------------------------------------------------------------  111 (384)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCC-------CCcccccccchh
Q psy1413         230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDH-------VSLEEGALLEPL  302 (408)
Q Consensus       230 vi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~-------~~~~~aa~~~~~  302 (408)
                         +|+|+..+..+|+.|..|..+.+++|.....+|.. .+|+|++|+.++++.++++|++       ++.+.+++..++
T Consensus       112 ---Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~-~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~  187 (384)
T cd08265         112 ---GDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFS-ADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPT  187 (384)
T ss_pred             ---CCEEEECCCCCCCCChhhhCcCcccCCCcceeeec-CCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHH
Confidence               89999999999999999999999999987666643 3799999999999999999986       345555555688


Q ss_pred             hhhhhhh-hc-cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHH
Q psy1413         303 SVGVHAC-RR-AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTH  380 (408)
Q Consensus       303 ~~~~~~~-~~-~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~  380 (408)
                      .++++++ .. ..++++++++|+|+|++|++++|+++.+|+.+|+++++++++.+.++++|++.++++++. +..+..+.
T Consensus       188 ~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~  266 (384)
T cd08265         188 SVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKM-RDCLSGEK  266 (384)
T ss_pred             HHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEccccc-ccccHHHH
Confidence            8889887 33 678999999999779999999999999999779999888889999999999999987641 11356777


Q ss_pred             HHHHhcCCCCceEEEcccch
Q psy1413         381 IIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       381 ~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++++.++++|+++||+|+.
T Consensus       267 v~~~~~g~gvDvvld~~g~~  286 (384)
T cd08265         267 VMEVTKGWGADIQVEAAGAP  286 (384)
T ss_pred             HHHhcCCCCCCEEEECCCCc
Confidence            88888888999999999863

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.84  E-value=6.2e-20  Score=178.69  Aligned_cols=236  Identities=31%  Similarity=0.521  Sum_probs=186.3

Q ss_pred             eeccceeeecccccCCCCC-CcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          69 LRRRFSLRFREQKPIEDPD-DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~-~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      +..++.+.. +..+.|.+. +..+++.+.++++++.++.+.. |....  ......+|.++.|++..+|+....++.   
T Consensus         6 ~~~~~~~~~-~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~-g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~---   78 (386)
T cd08283           6 WHGKGDVRV-EEVPDPKIEDPTDAIVRVTATAICGSDLHLYH-GYIPG--MKKGDILGHEFMGVVEEVGPEVRNLKV---   78 (386)
T ss_pred             EecCCCceE-EeCCCCCCCCCCeEEEEEEEEecchhhhhhhc-CCCCC--CCCCccccccceEEEEEeCCCCCCCCC---
Confidence            345566666 556677764 7888889999999887776642 21111  123456899999999999975433333   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        79 --------------------------------------------------------------------------------   78 (386)
T cd08283          79 --------------------------------------------------------------------------------   78 (386)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeec---------------cc----CCCCccceeEEeeccc--eeee
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---------------AT----PPDHGNLSRYYRHAAD--FCHK  286 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~g~~~~~~~~~~~--~~~~  286 (408)
                           +|+|+..+..+|++|.+|..+.++.|.+...-               +.    +..+|+|++|+.++++  .+++
T Consensus        79 -----Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~  153 (386)
T cd08283          79 -----GDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK  153 (386)
T ss_pred             -----CCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence                 89998888888999999999999999864321               11    1247999999999988  8999


Q ss_pred             CCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeE
Q psy1413         287 LPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT  365 (408)
Q Consensus       287 ~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~  365 (408)
                      +|+++++++++.++ ...++++++....+++++++||+|+|++|+.++++|+.+|+.+++.+++++++.+.+++++...+
T Consensus       154 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~v  233 (386)
T cd08283         154 IPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET  233 (386)
T ss_pred             CCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE
Confidence            99999998888776 67889998877788999999999779999999999999999779999999999999999854467


Q ss_pred             EecCCCCChH-HHHHHHHHHhcCCCCceEEEcccch
Q psy1413         366 VLIDRNHSLE-EISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       366 i~~~~~~~~~-~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++..    . ++.+.+++++.++++|++|||+|+.
T Consensus       234 i~~~~----~~~~~~~l~~~~~~~~~D~vld~vg~~  265 (386)
T cd08283         234 INFEE----VDDVVEALRELTGGRGPDVCIDAVGME  265 (386)
T ss_pred             EcCCc----chHHHHHHHHHcCCCCCCEEEECCCCc
Confidence            77655    3 4777888888777899999999864

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.84  E-value=8.3e-21  Score=181.30  Aligned_cols=223  Identities=22%  Similarity=0.263  Sum_probs=161.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP----------------------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~----------------------   58 (408)
                      +.++|||++|++.+ .|..+  ...+|.++|||++|+|+++|+++.++++||||++.+                      
T Consensus        32 v~~~~i~~~d~~~~-~g~~~--~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~  108 (333)
T cd08296          32 VEACGVCHSDAFVK-EGAMP--GLSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENG  108 (333)
T ss_pred             EEEEecchHHHHHH-hCCCC--CCCCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCC
Confidence            46899999999988 44322  135688999999999999999999999999998632                      


Q ss_pred             ------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          59 ------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        59 ------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                  ++...+...++..|+++++.+.+.++....+++.+.. ...+ .+++++|+|+|.+|++++++++.+|
T Consensus       109 ~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G  187 (333)
T cd08296         109 KVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMG  187 (333)
T ss_pred             CccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCC
Confidence                        1112223344555666665444444444444332111 1122 4788999999999999999988877


Q ss_pred             Cc---------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCccc
Q psy1413         126 HE---------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVKI  163 (408)
Q Consensus       126 ~~---------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~~  163 (408)
                      +.                                       ++.++++.|..   .+.+++++++|+++.+|......++
T Consensus       188 ~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  267 (333)
T cd08296         188 FRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAV  267 (333)
T ss_pred             CeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCc
Confidence            52                                       23444444322   1568899999999999987766777


Q ss_pred             CHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         164 PLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       164 ~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      +...++.+++++.++.... .+++++++++++++++.  ++ +.|+++|+.+||+.+.+++. .+||++
T Consensus       268 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~-~gk~v~  332 (333)
T cd08296         268 SPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKA-RFRVVL  332 (333)
T ss_pred             CHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCC-ceeEEe
Confidence            8778889999999988665 78999999998887753  44 68999999999999997644 566665

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.84  E-value=6.5e-20  Score=175.99  Aligned_cols=241  Identities=28%  Similarity=0.449  Sum_probs=187.0

Q ss_pred             ceeccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhcc
Q psy1413          68 ILRRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATR  146 (408)
Q Consensus        68 ~~~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~  146 (408)
                      ++..+..+.. ...++|.+ ....+.+.+..+++++.++.+. .|...   .......|.++.|++..+|+....++.  
T Consensus         5 ~~~~~~~~~~-~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~-~g~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~--   77 (345)
T cd08287           5 VIHGPGDIRV-EEVPDPVIEEPTDAVIRVVATCVCGSDLWPY-RGVSP---TRAPAPIGHEFVGVVEEVGSEVTSVKP--   77 (345)
T ss_pred             EEecCCceeE-EeCCCCCCCCCCeEEEEEeeeeecccchhhh-cCCCC---CCCCcccccceEEEEEEeCCCCCccCC--
Confidence            3445666666 55677775 6788888999999988776654 22211   123456799999999999965333333  


Q ss_pred             CCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCc
Q psy1413         147 PGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNA  226 (408)
Q Consensus       147 ~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~  226 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (345)
T cd08287          78 --------------------------------------------------------------------------------   77 (345)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccc--eeeeCCCCCCccccccc-----
Q psy1413         227 IKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALL-----  299 (408)
Q Consensus       227 ~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~-----  299 (408)
                            +|+|...+..+|+.|..|..+..++|.+..+++. ..+|+|++|..++.+  .++++|++++.+.+...     
T Consensus        78 ------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l  150 (345)
T cd08287          78 ------GDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGA-FVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLAL  150 (345)
T ss_pred             ------CCEEEeccccCCCCChhhhCcCcccCCCCCcccC-CCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhh
Confidence                  8888775567799999999999999998776664 478999999999875  89999999987222111     


Q ss_pred             -chhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHH
Q psy1413         300 -EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       300 -~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                       ..+.++++++....++++++++|.|+|++|+.++|+++.+|++.++++++++++.+.++++|++.++++++    .+..
T Consensus       151 ~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~----~~~~  226 (345)
T cd08287         151 SDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG----EEAV  226 (345)
T ss_pred             hcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc----ccHH
Confidence             24566777776778889999999877999999999999999987888888888889999999999999876    5666


Q ss_pred             HHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         379 THIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       379 ~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      +.+.+.+.++++|.+|||+|+...++.+
T Consensus       227 ~~i~~~~~~~~~d~il~~~g~~~~~~~~  254 (345)
T cd08287         227 ARVRELTGGVGADAVLECVGTQESMEQA  254 (345)
T ss_pred             HHHHHhcCCCCCCEEEECCCCHHHHHHH
Confidence            7788887778999999999876555443

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.84  E-value=5.3e-20  Score=176.49  Aligned_cols=237  Identities=31%  Similarity=0.526  Sum_probs=185.3

Q ss_pred             ccceeeecccccCCCCC-CcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCc
Q psy1413          71 RRFSLRFREQKPIEDPD-DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGG  149 (408)
Q Consensus        71 ~p~~~~~~~~~~lp~~~-~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG  149 (408)
                      .+..+.. +..++|.+. +..+++.+.+++++..++.+.- |..   ........|.++.|++..+|+....++.     
T Consensus         8 ~~~~~~~-~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~-g~~---~~~~~~~~g~e~~G~V~~vG~~v~~~~~-----   77 (344)
T cd08284           8 GPGDVRV-EEVPIPQIQDPTDAIVKVTAAAICGSDLHIYR-GHI---PSTPGFVLGHEFVGEVVEVGPEVRTLKV-----   77 (344)
T ss_pred             cCCCceE-EeccCCCCCCCCeEEEEEEEeeccccchhhhc-CCC---CCCCCcccccceEEEEEeeCCCccccCC-----
Confidence            3445666 566778765 7888899999999877765542 211   1223456788999999999975433333     


Q ss_pred             EEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEE
Q psy1413         150 CLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV  229 (408)
Q Consensus       150 ~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kv  229 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (344)
T cd08284          78 --------------------------------------------------------------------------------   77 (344)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEcCceeecCCCcccccccccCCccccccceeeccc---CCCCccceeEEeeccc--eeeeCCCCCCcccccccc-hhh
Q psy1413         230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCAT---PPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALLE-PLS  303 (408)
Q Consensus       230 vi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~-~~~  303 (408)
                         +|+|...+..+|+.|.+|..+.+..|++...+|.   ...+|+|++|..++++  .++++|+++++++++.++ ++.
T Consensus        78 ---Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~  154 (344)
T cd08284          78 ---GDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILP  154 (344)
T ss_pred             ---CCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchH
Confidence               8999888888999999999999999987655532   2346999999999865  999999999988887665 778


Q ss_pred             hhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413         304 VGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       304 ~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      ++++++......++++++|+|+|++|+.++|+++.+|+.+++++++++++.+.++++|++ .++.+.    .+..+.+.+
T Consensus       155 ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~----~~~~~~l~~  229 (344)
T cd08284         155 TGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED----AEPVERVRE  229 (344)
T ss_pred             HHHhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC----cCHHHHHHH
Confidence            888888777888999999997799999999999999985588888888898989999986 466654    456677888


Q ss_pred             HhcCCCCceEEEcccchhhhhh
Q psy1413         384 LLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       384 ~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      ++.++++|++|||+|+...+..
T Consensus       230 ~~~~~~~dvvid~~~~~~~~~~  251 (344)
T cd08284         230 ATEGRGADVVLEAVGGAAALDL  251 (344)
T ss_pred             HhCCCCCCEEEECCCCHHHHHH
Confidence            8877899999999997655443

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.84  E-value=2.5e-20  Score=177.95  Aligned_cols=231  Identities=25%  Similarity=0.410  Sum_probs=181.0

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ +..+.|...+.++++.+.+.++++.++.+.. |...  ....+...|.++.|++..+|+..+.++.         
T Consensus        12 ~~~~-~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~-g~~~--~~~~p~~~g~e~~G~v~~vG~~v~~~~~---------   78 (333)
T cd08296          12 PLEL-VERDVPLPGPGEVLIKVEACGVCHSDAFVKE-GAMP--GLSYPRVPGHEVVGRIDAVGEGVSRWKV---------   78 (333)
T ss_pred             CceE-EeccCCCCCCCEEEEEEEEEecchHHHHHHh-CCCC--CCCCCcccCcceeEEEEEECCCCccCCC---------
Confidence            4555 5567777777888889999999887765542 2111  1123456799999999999865333333         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        79 -------------------------------------------------------------------------------G   79 (333)
T cd08296          79 -------------------------------------------------------------------------------G   79 (333)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecC-CCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         234 DRVAIEP-GVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       234 ~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      ++|+..+ ...|+.|..|..|+++.|++....+.. .+|+|++|+.++++.++++|+++++++++.++ .+.++++++..
T Consensus        80 d~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~-~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~  158 (333)
T cd08296          80 DRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVT-RDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN  158 (333)
T ss_pred             CEEEeccccCCCCCChhhhCcCcccCCCCCccCcc-cCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh
Confidence            8887654 367999999999999999987765542 36999999999999999999999998888766 56667777766


Q ss_pred             cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ..+++++++||+|+|++|++++|+++.+|++ ++++++++++++.++++|++.+++++.    .+..+.+++.   +++|
T Consensus       159 ~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~i~~~~----~~~~~~~~~~---~~~d  230 (333)
T cd08296         159 SGAKPGDLVAVQGIGGLGHLAVQYAAKMGFR-TVAISRGSDKADLARKLGAHHYIDTSK----EDVAEALQEL---GGAK  230 (333)
T ss_pred             cCCCCCCEEEEECCcHHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHcCCcEEecCCC----ccHHHHHHhc---CCCC
Confidence            6889999999999999999999999999996 888899999999999999999998866    4455556554   3799


Q ss_pred             eEEEcccchhhhhh
Q psy1413         392 KTIDCSGIESTIKL  405 (408)
Q Consensus       392 ~i~d~~g~~~~~~~  405 (408)
                      +++|++|....++.
T Consensus       231 ~vi~~~g~~~~~~~  244 (333)
T cd08296         231 LILATAPNAKAISA  244 (333)
T ss_pred             EEEECCCchHHHHH
Confidence            99999875545443

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.84  E-value=1.4e-20  Score=180.15  Aligned_cols=230  Identities=32%  Similarity=0.539  Sum_probs=164.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |.++++|++|++.++.+..+.....+|.++|||++|+|+++|++|+.|++||+|+..+.                     
T Consensus        28 v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~  107 (339)
T cd08232          28 VAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMR  107 (339)
T ss_pred             EEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCcccc
Confidence            46899999999876434323333456889999999999999999999999999986322                     


Q ss_pred             -----------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccc
Q psy1413          60 -----------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPM  122 (408)
Q Consensus        60 -----------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~  122 (408)
                                       +...+...++..|+.++++++ ..+.++.+++..........+++++|.|+|.+|++++++++
T Consensus       108 ~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~a-a~~~~~~~a~~~l~~~~~~~~~~VLI~g~g~vG~~~~~lak  186 (339)
T cd08232         108 FLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRA-ALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAAAR  186 (339)
T ss_pred             ceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHh-hhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence                             223333445556666666332 33333333322111111126788999888999999988888


Q ss_pred             cccC-c---------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCC
Q psy1413         123 IVGH-E---------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQ  159 (408)
Q Consensus       123 ~~G~-~---------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~  159 (408)
                      .+|+ .                                       ++.++++.|..   .+.+++|+++|+++.+|....
T Consensus       187 ~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~  266 (339)
T cd08232         187 RAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG  266 (339)
T ss_pred             HcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC
Confidence            7765 1                                       23334444421   267899999999999996555


Q ss_pred             CcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         160 DVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       160 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +..+++..++.+++++.+.......+++++++++++++++.+.++++|++++++++++.+.++. ..+|++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~  338 (339)
T cd08232         267 PVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRT-RSVKVQLS  338 (339)
T ss_pred             CccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCC-CceeEEEe
Confidence            5555666667899999888766678999999999999988788899999999999999998764 46677765

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=99.84  E-value=3.2e-20  Score=178.80  Aligned_cols=235  Identities=23%  Similarity=0.347  Sum_probs=175.4

Q ss_pred             eeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          69 LRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        69 ~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      +..|. .+.. ++.++|.+.+.++++.+.++++++.++.+.- |..+.  ......+|.|+.|+|..+|+..+.++.   
T Consensus        15 ~~~~~~~~~~-~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~-g~~~~--~~~p~i~G~E~~G~Vv~vG~~v~~~~~---   87 (357)
T PLN02514         15 ARDPSGHLSP-YTYTLRKTGPEDVVIKVIYCGICHTDLHQIK-NDLGM--SNYPMVPGHEVVGEVVEVGSDVSKFTV---   87 (357)
T ss_pred             EecCCCCceE-EeecCCCCCCCcEEEEEEEeccChHHHHhhc-CCcCc--CCCCccCCceeeEEEEEECCCcccccC---
Confidence            33344 2444 5577888888899999999999988776542 22111  123556899999999999975443443   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        88 --------------------------------------------------------------------------------   87 (357)
T PLN02514         88 --------------------------------------------------------------------------------   87 (357)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCC-cccccccccCCccccccceeec-------ccCCCCccceeEEeeccceeeeCCCCCCccccccc
Q psy1413         228 KVMIHCDRVAIEPGV-PCRTCTYCKEGRYNLCRQIFFC-------ATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALL  299 (408)
Q Consensus       228 kvvi~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~  299 (408)
                           +|+|...+.. +|++|..|..++++.|++..+.       |. ..+|+|++|+.++++.++++|+++++++++.+
T Consensus        88 -----Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  161 (357)
T PLN02514         88 -----GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGK-PTQGGFASAMVVDQKFVVKIPEGMAPEQAAPL  161 (357)
T ss_pred             -----CCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCc-cCCCccccEEEEchHHeEECCCCCCHHHhhhh
Confidence                 8898766543 6999999999999999875321       11 23699999999999999999999999888877


Q ss_pred             c-hhhhhhhhhhc-cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHH
Q psy1413         300 E-PLSVGVHACRR-AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEE  376 (408)
Q Consensus       300 ~-~~~~~~~~~~~-~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~  376 (408)
                      + .+.++++++.. ...+++++++|+|+|++|+.++|+++.+|++ ++++++++++.+.+ +++|++.+++..+    . 
T Consensus       162 ~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~-vi~~~~~~~~~~~~~~~~Ga~~~i~~~~----~-  235 (357)
T PLN02514        162 LCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSDKKREEALEHLGADDYLVSSD----A-  235 (357)
T ss_pred             hhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHhcCCcEEecCCC----h-
Confidence            6 55677877754 3457899999997799999999999999997 77777777666554 6799998887543    2 


Q ss_pred             HHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         377 ISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       377 ~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                        +.+.+.+  .++|++|||+|...+++.+
T Consensus       236 --~~~~~~~--~~~D~vid~~g~~~~~~~~  261 (357)
T PLN02514        236 --AEMQEAA--DSLDYIIDTVPVFHPLEPY  261 (357)
T ss_pred             --HHHHHhc--CCCcEEEECCCchHHHHHH
Confidence              2344444  3799999999976665544

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.84  E-value=1.8e-20  Score=181.79  Aligned_cols=225  Identities=22%  Similarity=0.290  Sum_probs=158.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++|||++|++.+. |.   .+..+|.++|||++|+|+++|+++..+++||||+..+...                   
T Consensus        32 v~a~~i~~~D~~~~~-g~---~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~  107 (375)
T cd08282          32 ITTTAICGSDLHMYR-GR---TGAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVN  107 (375)
T ss_pred             EEEEeeCHHHHHHHc-CC---CCCCCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCC
Confidence            468999999999884 32   2245689999999999999999999999999998633211                   


Q ss_pred             ------------------------cccCC--cceeccceeeec---ccccCCCCCCcceEEEEeeeee-cCCeEEEEccC
Q psy1413          62 ------------------------NVCLS--PILRRRFSLRFR---EQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHG  111 (408)
Q Consensus        62 ------------------------~~~~~--~~~~~p~~~~~~---~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G  111 (408)
                                              ..+..  .++..|+++++.   ..+.++.+..+++.+. ....+ .+++++|.|+|
T Consensus       108 ~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g  186 (375)
T cd08282         108 PGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAG  186 (375)
T ss_pred             cccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCC
Confidence                                    11111  344555555553   1233333333333221 11122 47889998999


Q ss_pred             ccccccccccccccC-c----------------------------------------ceeEEEccCch------------
Q psy1413         112 QIGDFRLSDPMIVGH-E----------------------------------------ASGIVSKVGAK------------  138 (408)
Q Consensus       112 ~vG~~~i~~a~~~G~-~----------------------------------------~~~vv~~~g~~------------  138 (408)
                      ++|++++++++.+|+ .                                        ++.+++++|..            
T Consensus       187 ~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~  266 (375)
T cd08282         187 PVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDFSDGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNL  266 (375)
T ss_pred             HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCeEeccCcccHHHHHHHhhCCCCCEEEECCCCcccccccccchHH
Confidence            999999988887775 1                                        22334444432            


Q ss_pred             --HHHHhhccCCcEEEEEccCCC-------------CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCc
Q psy1413         139 --VKHLKATRPGGCLVIVGAGSQ-------------DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKL  202 (408)
Q Consensus       139 --~~~~~~l~~gG~iv~~G~~~~-------------~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~  202 (408)
                        .+++++++++|+++.+|....             ...+++..++.++..+.+..... ..+++++++++++++++.++
T Consensus       267 ~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~  346 (375)
T cd08282         267 VLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFV  346 (375)
T ss_pred             HHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHc
Confidence              256789999999999886431             13456667788888888876544 67899999999999988778


Q ss_pred             eeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         203 ITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       203 i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      ++++|+++++++||+.+.+++  ..|++++
T Consensus       347 ~~~~~~l~~~~~a~~~~~~~~--~~kvvv~  374 (375)
T cd08282         347 VSHVISLEDAPEAYARFDKRL--ETKVVIK  374 (375)
T ss_pred             EEEEeeHHHHHHHHHHHhcCC--ceEEEeC
Confidence            999999999999999999876  5577764

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.84  E-value=6.4e-20  Score=179.87  Aligned_cols=236  Identities=24%  Similarity=0.356  Sum_probs=177.1

Q ss_pred             ceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCcc-cc---ccccccccccCcceeEEEccCchHH-HH
Q psy1413          68 ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQI-GD---FRLSDPMIVGHEASGIVSKVGAKVK-HL  142 (408)
Q Consensus        68 ~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~v-G~---~~i~~a~~~G~~~~~vv~~~g~~~~-~~  142 (408)
                      ++..|..+.+ +..+.|.+.+.++++.+.++++++.++.++..|.. ..   .....+..+|+|+.|+|..+|+..+ .+
T Consensus         7 ~~~~~~~l~~-~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~   85 (410)
T cd08238           7 RMYGKGDLRL-EKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKY   85 (410)
T ss_pred             EEEcCCceEE-EecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCC
Confidence            4456667777 66788888888999999999999998875422211 00   0012456789999999999997533 24


Q ss_pred             hhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcC
Q psy1413         143 KATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTG  222 (408)
Q Consensus       143 ~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~  222 (408)
                      +.                                                                              
T Consensus        86 ~v------------------------------------------------------------------------------   87 (410)
T cd08238          86 KP------------------------------------------------------------------------------   87 (410)
T ss_pred             CC------------------------------------------------------------------------------
Confidence            43                                                                              


Q ss_pred             CCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccc----eeeeCCCCCCcccccc
Q psy1413         223 AGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD----FCHKLPDHVSLEEGAL  298 (408)
Q Consensus       223 ~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~  298 (408)
                                +|+|+..+...|+.|..|.        +   ++. ..+|+|++|+.++++    .++++|++++++++++
T Consensus        88 ----------GdrV~~~~~~~c~~~~~c~--------~---~g~-~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal  145 (410)
T cd08238          88 ----------GQRFVIQPALILPDGPSCP--------G---YSY-TYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASL  145 (410)
T ss_pred             ----------CCEEEEcCCcCCCCCCCCC--------C---ccc-cCCCcceEEEEecHHhccCCeEECCCCCCHHHHhh
Confidence                      8999888888888877662        1   122 247999999999987    5899999999988887


Q ss_pred             cchhhhh---hhhh---------hccCcCCCCEEEEEec-chhHHHHHHHHHHhC--CCeEEEEecChhhHHHHHHc---
Q psy1413         299 LEPLSVG---VHAC---------RRAGVTLGSKVLITGA-GPIGLVTLLTARALG--ASRVVITDILEHKLKTAKEM---  360 (408)
Q Consensus       299 ~~~~~~~---~~~~---------~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~G--a~~vv~~~~~~~~~~~~~~~---  360 (408)
                      +.+++++   +.+.         .+..++++++++|+|+ |++|++++|+++.+|  +.+|++++++++|++.++++   
T Consensus       146 ~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~  225 (410)
T cd08238         146 VEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPP  225 (410)
T ss_pred             cchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccc
Confidence            6554332   2221         3467889999999997 999999999999975  45699999999999999887   


Q ss_pred             -----CCC-eEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         361 -----GAD-ATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       361 -----ga~-~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                           |++ .++++++   .+++.+.++++++++++|++||++|+..+++.++
T Consensus       226 ~~~~~Ga~~~~i~~~~---~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~  275 (410)
T cd08238         226 EAASRGIELLYVNPAT---IDDLHATLMELTGGQGFDDVFVFVPVPELVEEAD  275 (410)
T ss_pred             cccccCceEEEECCCc---cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHH
Confidence                 776 4676543   1457778888888889999999999877766553

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.84  E-value=1.3e-20  Score=180.80  Aligned_cols=231  Identities=42%  Similarity=0.659  Sum_probs=167.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |.++++|++|++.+..+..+.....+|.++|||++|+|+++|++++++++||+|++.+.                     
T Consensus        29 v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (343)
T cd05285          29 VRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMR  108 (343)
T ss_pred             EEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCcc
Confidence            46899999999987433333333356888999999999999999999999999986321                     


Q ss_pred             -------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC
Q psy1413          60 -------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        60 -------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                                   +.......++..|+++++++.+.+ .+..++..+.....-..+++++|.|+|++|++++++++.+|+
T Consensus       109 ~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~  187 (343)
T cd05285         109 FAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGA  187 (343)
T ss_pred             ccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                         122333345555666665333322 222222221111111247889998889999999888887775


Q ss_pred             c----------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccC
Q psy1413         127 E----------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAG  157 (408)
Q Consensus       127 ~----------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~  157 (408)
                      .                                              ++.++++.|..   ...+++++++|+++.+|..
T Consensus       188 ~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  267 (343)
T cd05285         188 TKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMG  267 (343)
T ss_pred             cEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccC
Confidence            3                                              23334444432   1578899999999999976


Q ss_pred             CCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         158 SQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       158 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .....+++..+.++++++.+.+...+.+++++++++++++++.+++.++|+++++.+|++.+.+++...+||+|.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  342 (343)
T cd05285         268 KPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIE  342 (343)
T ss_pred             CCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence            655666777888999999998776688999999999999876667889999999999999999887777999884

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=99.84  E-value=2.2e-20  Score=180.63  Aligned_cols=224  Identities=22%  Similarity=0.328  Sum_probs=160.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP----------------------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~----------------------   58 (408)
                      |.++|+|++|++.+. +.   ++..+|.++|||++|+|+++|+++..+++||||++.+                      
T Consensus        34 v~a~gi~~~d~~~~~-g~---~~~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (365)
T cd08278          34 IVATGICHTDLVVRD-GG---LPTPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFP  109 (365)
T ss_pred             EEEeecCcccHHHhc-CC---CCCCCCcccccceeEEEEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCccc
Confidence            468999999999884 32   2245688999999999999999999999999998532                      


Q ss_pred             ---------------------------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCe
Q psy1413          59 ---------------------------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSD  104 (408)
Q Consensus        59 ---------------------------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~  104 (408)
                                                       ++...+.+.++..|+.+++++.++++....+++........+ .+++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~  189 (365)
T cd08278         110 LNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSS  189 (365)
T ss_pred             ccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCE
Confidence                                             111222334455566555544444444444443222111222 4788


Q ss_pred             EEEEccCccccccccccccccCc------------------------------------------ceeEEEccCch---H
Q psy1413         105 VHYLTHGQIGDFRLSDPMIVGHE------------------------------------------ASGIVSKVGAK---V  139 (408)
Q Consensus       105 vlv~g~G~vG~~~i~~a~~~G~~------------------------------------------~~~vv~~~g~~---~  139 (408)
                      ++|+|+|++|++++++++.+|++                                          ++.+++++|..   .
T Consensus       190 vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~  269 (365)
T cd08278         190 IAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIE  269 (365)
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHH
Confidence            99999999999999988877762                                          34455555532   2


Q ss_pred             HHHhhccCCcEEEEEccC--CCCcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccchHH
Q psy1413         140 KHLKATRPGGCLVIVGAG--SQDVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLEDTL  213 (408)
Q Consensus       140 ~~~~~l~~gG~iv~~G~~--~~~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~  213 (408)
                      +++++++++|+++.+|..  .....+++..+..+++++.+....    .+.+++++++++++++++.+++ +.|+++++.
T Consensus       270 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~  348 (365)
T cd08278         270 QAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDIN  348 (365)
T ss_pred             HHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHH
Confidence            678999999999999975  345667777777899999887643    1457889999999998765444 479999999


Q ss_pred             HHHHHHHcCCCCceEEEE
Q psy1413         214 HAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       214 ~a~~~~~~~~~~~~kvvi  231 (408)
                      +|++.+.+++  ..|+++
T Consensus       349 ~a~~~~~~~~--~~k~~~  364 (365)
T cd08278         349 QAIADSESGK--VIKPVL  364 (365)
T ss_pred             HHHHHHHCCC--ceEEEE
Confidence            9999998764  457665

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>KOG0025|consensus

Probab=99.84  E-value=8.5e-21  Score=166.77  Aligned_cols=223  Identities=18%  Similarity=0.192  Sum_probs=170.1

Q ss_pred             CeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCCcceeccce
Q psy1413           2 HCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         2 ~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~~~~~~p~~   74 (408)
                      .|+-||++|+..+++-| + ..+++|.+-|.|++|+|+.+|++|++||+||+|+...       ++.....+..+..++.
T Consensus        55 LAaPINPsDIN~IQGvY-p-vrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~  132 (354)
T KOG0025|consen   55 LAAPINPSDINQIQGVY-P-VRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKD  132 (354)
T ss_pred             eecCCChHHhhhhcccc-C-CCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCc
Confidence            47889999999996443 3 3346789999999999999999999999999998544       2334555566666777


Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEE-Ec-cCccccccccccccccCc-------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHY-LT-HGQIGDFRLSDPMIVGHE-------------------------  127 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv-~g-~G~vG~~~i~~a~~~G~~-------------------------  127 (408)
                      ++++.++++....++++.+.-....++..+.+| .| ..++|+..+|+|+++|..                         
T Consensus       133 ~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~  212 (354)
T KOG0025|consen  133 IPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATE  212 (354)
T ss_pred             CChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCce
Confidence            777677777777788886655556665444445 45 558999999999999872                         


Q ss_pred             ---------------------ceeEEEccCchH--HHHhhccCCcEEEEEc-cCCCCcccCHHHHHhcCcEEEEeecCC-
Q psy1413         128 ---------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVG-AGSQDVKIPLVLTMTKEIDIRGVFRYA-  182 (408)
Q Consensus       128 ---------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G-~~~~~~~~~~~~~~~~~~~l~g~~~~~-  182 (408)
                                           .-..+.++|...  +..+.|.+||+++.+| +...|++++...++||++.++|.|..+ 
T Consensus       213 ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W  292 (354)
T KOG0025|consen  213 VITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRW  292 (354)
T ss_pred             EecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeeh
Confidence                                 223455665443  5689999999999998 788999999999999999999998542 


Q ss_pred             -----------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceE
Q psy1413         183 -----------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIK  228 (408)
Q Consensus       183 -----------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~k  228 (408)
                                 +.+.++.+|++.|++....  ....+|++...|++...+.....+|
T Consensus       293 ~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~L~~~~tald~~L~~~~~~~K  347 (354)
T KOG0025|consen  293 KKEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVPLADHKTALDAALSKFGKSGK  347 (354)
T ss_pred             hhccCCcHHHHHHHHHHHHHHHcCeecccc--ceeeechhhhHHHHHHHHHhccCCc
Confidence                       1257788999999997543  4567999999999887766554333

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.84  E-value=8.4e-20  Score=174.78  Aligned_cols=239  Identities=41%  Similarity=0.737  Sum_probs=183.6

Q ss_pred             ceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          68 ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        68 ~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      ++.+++.+.+ +..++|.+.+..+.+.+...+++..++.+.-.|..+......+...|.++.|++..+|.....++.   
T Consensus         2 ~~~~~~~~~~-~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~---   77 (339)
T cd08232           2 VIHAAGDLRV-EERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAP---   77 (339)
T ss_pred             eeccCCceEE-EEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCC---
Confidence            4566778888 556788888888899999999887776543222222211233456789999999999864333333   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (339)
T cd08232          78 --------------------------------------------------------------------------------   77 (339)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeeccc----CCCCccceeEEeeccceeeeCCCCCCcccccccchhh
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCAT----PPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLS  303 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~  303 (408)
                           +++|...+..+|+.|.+|..|.++.|.+..+++.    ...+|+|++|+.++++.++++|++++.++++...++.
T Consensus        78 -----Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~  152 (339)
T cd08232          78 -----GQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLA  152 (339)
T ss_pred             -----CCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHH
Confidence                 8899888888999999999999999998644442    1247999999999999999999999988887655777


Q ss_pred             hhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413         304 VGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       304 ~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      ++++++......+++++||.|+|++|+.++|+++.+|+++++++++++++.+.++++|++.++++++    .+.    .+
T Consensus       153 ~a~~~l~~~~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~----~~~----~~  224 (339)
T cd08232         153 VALHAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR----DPL----AA  224 (339)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc----hhh----hh
Confidence            8888885554448999999877999999999999999976888888888888889999999998765    332    22


Q ss_pred             Hh-cCCCCceEEEcccchhhh
Q psy1413         384 LL-QGEQPDKTIDCSGIESTI  403 (408)
Q Consensus       384 ~~-~~~~~d~i~d~~g~~~~~  403 (408)
                      .. ...++|++|||+|+...+
T Consensus       225 ~~~~~~~vd~vld~~g~~~~~  245 (339)
T cd08232         225 YAADKGDFDVVFEASGAPAAL  245 (339)
T ss_pred             hhccCCCccEEEECCCCHHHH
Confidence            22 234699999999865443

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.84  E-value=1.3e-19  Score=174.06  Aligned_cols=238  Identities=32%  Similarity=0.511  Sum_probs=185.7

Q ss_pred             eeccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          69 LRRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      +..++.+.. ...+.|.+ .+..++++..+++++..++.+. .|...  ........|.++.|++..+|+....++.   
T Consensus         6 ~~~~~~~~~-~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~-~g~~~--~~~~~~~~g~e~~G~V~~vG~~v~~~~~---   78 (347)
T cd05278           6 YLGPGKIGL-EEVPDPKIQGPHDAIVRVTATSICGSDLHIY-RGGVP--GAKHGMILGHEFVGEVVEVGSDVKRLKP---   78 (347)
T ss_pred             EecCCceEE-EEcCCCCCCCCCeEEEEEEEEEechhhHHHH-cCCCC--CCCCCceeccceEEEEEEECCCccccCC---
Confidence            344555555 44566666 6778888888888877665443 12111  1233456889999999999865333333   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        79 --------------------------------------------------------------------------------   78 (347)
T cd05278          79 --------------------------------------------------------------------------------   78 (347)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeecc--cCCCCccceeEEeeccc--eeeeCCCCCCcccccccc-hh
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCA--TPPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALLE-PL  302 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~-~~  302 (408)
                           +|+|...+..+|+.|.+|.++...+|++.....  ....+|+|++|..++++  .++++|++++.++++.++ ..
T Consensus        79 -----Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~  153 (347)
T cd05278          79 -----GDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL  153 (347)
T ss_pred             -----CCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence                 899988888899999999999999998754321  11246899999999987  899999999988888776 67


Q ss_pred             hhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHH
Q psy1413         303 SVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHII  382 (408)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~  382 (408)
                      .++++++....+++++++||.|+|++|+.++|+|+.+|+.+++.+++++++.+.++++|++.++++++    .++.+.++
T Consensus       154 ~ta~~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~----~~~~~~i~  229 (347)
T cd05278         154 PTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN----GDIVEQIL  229 (347)
T ss_pred             hheeehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc----chHHHHHH
Confidence            88888886678889999999766999999999999999855888888888889999999999999876    56777788


Q ss_pred             HHhcCCCCceEEEcccchhh
Q psy1413         383 ELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       383 ~~~~~~~~d~i~d~~g~~~~  402 (408)
                      +.+.++++|++||++|+...
T Consensus       230 ~~~~~~~~d~vld~~g~~~~  249 (347)
T cd05278         230 ELTGGRGVDCVIEAVGFEET  249 (347)
T ss_pred             HHcCCCCCcEEEEccCCHHH
Confidence            88777899999999987433

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.83  E-value=2.1e-20  Score=180.68  Aligned_cols=224  Identities=21%  Similarity=0.296  Sum_probs=159.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      +.++++|++|++.+. +.   ....+|.++|||++|+|+++|++++.+++||||+..+.                     
T Consensus        32 v~~~~i~~~d~~~~~-g~---~~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~  107 (365)
T cd05279          32 VVATGVCHTDLHVID-GK---LPTPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSR  107 (365)
T ss_pred             EEEeeecchhHHHhc-CC---CCCCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcc
Confidence            458999999999885 32   23456889999999999999999999999999987532                     


Q ss_pred             ---------------------------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeE
Q psy1413          60 ---------------------------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDV  105 (408)
Q Consensus        60 ---------------------------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~v  105 (408)
                                                       +.......++..|+++++++.+.++.++.+++.+...... ..++++
T Consensus       108 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~v  187 (365)
T cd05279         108 GTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTC  187 (365)
T ss_pred             cccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEE
Confidence                                             1122233444555555554344444344333321111112 247899


Q ss_pred             EEEccCccccccccccccccCc--------------------------------------------ceeEEEccCch---
Q psy1413         106 HYLTHGQIGDFRLSDPMIVGHE--------------------------------------------ASGIVSKVGAK---  138 (408)
Q Consensus       106 lv~g~G~vG~~~i~~a~~~G~~--------------------------------------------~~~vv~~~g~~---  138 (408)
                      +|+|+|++|++++++++.+|+.                                            ++.+++++|..   
T Consensus       188 lI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~  267 (365)
T cd05279         188 AVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTL  267 (365)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHH
Confidence            9999999999998888877752                                            22334444321   


Q ss_pred             HHHHhhcc-CCcEEEEEccCC--CCcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413         139 VKHLKATR-PGGCLVIVGAGS--QDVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLED  211 (408)
Q Consensus       139 ~~~~~~l~-~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~  211 (408)
                      .+++++++ ++|+++.+|...  ....++...+ .++.++.|.+..    ...+.+++++++++++++.++++++|+++|
T Consensus       268 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~  346 (365)
T cd05279         268 KQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEE  346 (365)
T ss_pred             HHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHH
Confidence            15688999 999999999754  4566777677 788888887643    367899999999999998888999999999


Q ss_pred             HHHHHHHHHcCCCCceEEEE
Q psy1413         212 TLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       212 ~~~a~~~~~~~~~~~~kvvi  231 (408)
                      +++||+.+.+++  ..|+++
T Consensus       347 ~~~a~~~~~~~~--~~~~~~  364 (365)
T cd05279         347 INDGFDLMRSGE--SIRTIL  364 (365)
T ss_pred             HHHHHHHHhCCC--ceeeee
Confidence            999999988653  345544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.83  E-value=1.1e-19  Score=177.82  Aligned_cols=167  Identities=24%  Similarity=0.216  Sum_probs=141.6

Q ss_pred             cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-  310 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-  310 (408)
                      +++|...+..+|++|+.|..+++++|.....+|....+|+|++|+.++++.++++|++++.++++.+. ...++++++. 
T Consensus       102 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~  181 (398)
T TIGR01751       102 GDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVG  181 (398)
T ss_pred             CCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhh
Confidence            89998888889999999999999999887777765678999999999999999999999988887666 6677888764 


Q ss_pred             --ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCC---------------
Q psy1413         311 --RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNH---------------  372 (408)
Q Consensus       311 --~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~---------------  372 (408)
                        ...++++++++|+|+ |++|++++|+++.+|++ ++.+++++++.+.++++|++.++|+++..               
T Consensus       182 ~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~-vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~  260 (398)
T TIGR01751       182 WNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGN-PVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKE  260 (398)
T ss_pred             hhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccch
Confidence              367889999999999 99999999999999998 67777888899999999999999875420               


Q ss_pred             ---ChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         373 ---SLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       373 ---~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                         ......+.+.+++.++++|++|||+|..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~  291 (398)
T TIGR01751       261 WTKSFKRFGKRIRELTGGEDPDIVFEHPGRA  291 (398)
T ss_pred             hhhcchhHHHHHHHHcCCCCceEEEECCcHH
Confidence               0123556777888778999999999864

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.83  E-value=1.5e-19  Score=175.41  Aligned_cols=234  Identities=30%  Similarity=0.511  Sum_probs=181.8

Q ss_pred             eeccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          69 LRRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      +..|+.+.. +..++|.+ .+..+++.+.++++++.++.+. .|...   .......|.++.|++..+|...+.++.   
T Consensus         6 ~~~~~~~~~-~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~-~g~~~---~~~p~~~g~e~~G~V~~vG~~v~~~~~---   77 (375)
T cd08282           6 YGGPGNVAV-EDVPDPKIEHPTDAIVRITTTAICGSDLHMY-RGRTG---AEPGLVLGHEAMGEVEEVGSAVESLKV---   77 (375)
T ss_pred             EecCCceeE-EeCCCCCCCCCCeEEEEEEEEeeCHHHHHHH-cCCCC---CCCCceeccccEEEEEEeCCCCCcCCC---
Confidence            445666777 66677774 6788888999999987766553 12111   223556799999999999865333333   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (375)
T cd08282          78 --------------------------------------------------------------------------------   77 (375)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCcccccccee---------ecccCCCCccceeEEeeccc--eeeeCCCCCCcc--
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIF---------FCATPPDHGNLSRYYRHAAD--FCHKLPDHVSLE--  294 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~--  294 (408)
                           +++|+..+..+|+.|..|..++.++|.+..         +++....+|+|++|..++.+  .++++|++++.+  
T Consensus        78 -----Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~  152 (375)
T cd08282          78 -----GDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK  152 (375)
T ss_pred             -----CCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence                 899988888899999999999999997521         12223357999999999976  899999999987  


Q ss_pred             -cccccc-hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCC
Q psy1413         295 -EGALLE-PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNH  372 (408)
Q Consensus       295 -~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~  372 (408)
                       .++.+. .+.++++++....++++++++|.|+|++|++++|+++.+|+++|++++++++|.+.++++|++ .+++++  
T Consensus       153 ~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~--  229 (375)
T cd08282         153 DDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSD--  229 (375)
T ss_pred             hheeeecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCc--
Confidence             344444 678899988778889999999987799999999999999997788898999999999999984 566655  


Q ss_pred             ChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         373 SLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                        ++..+.+++++. +++|++|||+|+..
T Consensus       230 --~~~~~~i~~~~~-~~~d~v~d~~g~~~  255 (375)
T cd08282         230 --GDPVEQILGLEP-GGVDRAVDCVGYEA  255 (375)
T ss_pred             --ccHHHHHHHhhC-CCCCEEEECCCCcc
Confidence              566677777776 68999999999763

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.83  E-value=1.7e-20  Score=180.27  Aligned_cols=227  Identities=18%  Similarity=0.206  Sum_probs=163.5

Q ss_pred             CCeeeecccchhhhhcCCCCC------------------CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---
Q psy1413           1 MHCVGICGSDVHYLTHGQIGD------------------FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~------------------~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---   59 (408)
                      |.++|+|++|++.+ .|.++.                  ...++|.++|||++|+|+++|+++++|++||||+..+.   
T Consensus        35 v~~~~~~~~d~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~  113 (350)
T cd08274          35 VGACGVNNTDINTR-EGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRD  113 (350)
T ss_pred             EEeccCCHHHHHHh-cCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCC
Confidence            46899999999987 332210                  12457899999999999999999999999999987431   


Q ss_pred             ----------------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-Ccccc
Q psy1413          60 ----------------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGD  115 (408)
Q Consensus        60 ----------------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~  115 (408)
                                            +...+...++..|+++++.+.+.++....+++.+. ....+ .+++++|+|+ |++|+
T Consensus       114 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~  192 (350)
T cd08274         114 PPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGS  192 (350)
T ss_pred             CCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHH
Confidence                                  12233334555666666644455555444443221 11222 4789999996 99999


Q ss_pred             ccccccccccCcc---------------------------------------eeEEEccCch--HHHHhhccCCcEEEEE
Q psy1413         116 FRLSDPMIVGHEA---------------------------------------SGIVSKVGAK--VKHLKATRPGGCLVIV  154 (408)
Q Consensus       116 ~~i~~a~~~G~~~---------------------------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~  154 (408)
                      +++++++.+|+..                                       +.+++++|..  ..++++++++|+++.+
T Consensus       193 ~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~  272 (350)
T cd08274         193 ALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLADAKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTA  272 (350)
T ss_pred             HHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEe
Confidence            9999888777642                                       2233333321  1578999999999999


Q ss_pred             ccCCCC-cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         155 GAGSQD-VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       155 G~~~~~-~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      |..... ..++...++.+++++.++.... ..++++++++.+++++  ++++++|+++++.++|+.+..++ ...|++++
T Consensus       273 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~-~~~kvvi~  349 (350)
T cd08274         273 GAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEIR--PVVAKTFPLSEIREAQAEFLEKR-HVGKLVLV  349 (350)
T ss_pred             cccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHHHCCCcc--cccccccCHHHHHHHHHHHhcCC-CceEEEEe
Confidence            965444 6777888889999999988765 7799999999999875  45889999999999999998754 45566654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.83  E-value=2.1e-19  Score=171.98  Aligned_cols=233  Identities=40%  Similarity=0.673  Sum_probs=185.1

Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL  151 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i  151 (408)
                      +..+.+ ...++|.+.+..+.+.+.+++++..++.+.- |....  .......|.++.|++..+|...+.++.       
T Consensus         9 ~~~~~~-~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~-~~~~~--~~~~~~~g~e~~G~V~~~G~~v~~~~~-------   77 (337)
T cd08261           9 PGRLEV-VDIPEPVPGAGEVLVRVKRVGICGSDLHIYH-GRNPF--ASYPRILGHELSGEVVEVGEGVAGLKV-------   77 (337)
T ss_pred             CCceEE-EECCCCCCCCCeEEEEEEEEeEcccChHHHc-CCCCc--CCCCcccccccEEEEEEeCCCCCCCCC-------
Confidence            345555 5567777778888889999999877765532 11111  122456789999999999864333333       


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (337)
T cd08261          78 --------------------------------------------------------------------------------   77 (337)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhc
Q psy1413         232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRR  311 (408)
Q Consensus       232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~  311 (408)
                       +|+|+..+..+|+.|..|..++++.|...+.++.. ..|+|++|+.++++ ++++|+++++++++.+.++.++++.+..
T Consensus        78 -Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~~~~~  154 (337)
T cd08261          78 -GDRVVVDPYISCGECYACRKGRPNCCENLQVLGVH-RDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRR  154 (337)
T ss_pred             -CCEEEECCCCCCCCChhhhCcCcccCCCCCeeeec-CCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHHHHHh
Confidence             88998877889999999999999999765554432 47999999999999 9999999999888876677777777766


Q ss_pred             cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ..+++++++||+|+|++|+.++|+|+.+|++ ++++.+++++.+.++++|+++++++++    .++.+.+.+++.++++|
T Consensus       155 ~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~-v~~~~~s~~~~~~~~~~g~~~v~~~~~----~~~~~~l~~~~~~~~vd  229 (337)
T cd08261         155 AGVTAGDTVLVVGAGPIGLGVIQVAKARGAR-VIVVDIDDERLEFARELGADDTINVGD----EDVAARLRELTDGEGAD  229 (337)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEECCCHHHHHHHHHhCCCEEecCcc----cCHHHHHHHHhCCCCCC
Confidence            7889999999997799999999999999998 888888889999999999999999876    56777788888778899


Q ss_pred             eEEEcccchhhh
Q psy1413         392 KTIDCSGIESTI  403 (408)
Q Consensus       392 ~i~d~~g~~~~~  403 (408)
                      ++|||+|+....
T Consensus       230 ~vld~~g~~~~~  241 (337)
T cd08261         230 VVIDATGNPASM  241 (337)
T ss_pred             EEEECCCCHHHH
Confidence            999999875443

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.83  E-value=2.5e-19  Score=171.90  Aligned_cols=240  Identities=31%  Similarity=0.531  Sum_probs=186.1

Q ss_pred             eeccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          69 LRRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      +..++.+.+ +..++|.+ ....+++++.+++++..++.+.- |...  ........|.++.|.+..+|+....++.   
T Consensus         6 ~~~~~~~~~-~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~V~~~G~~v~~~~~---   78 (345)
T cd08286           6 YHGPGKISW-EDRPKPTIQEPTDAIVKMLKTTICGTDLHILK-GDVP--TVTPGRILGHEGVGVVEEVGSAVTNFKV---   78 (345)
T ss_pred             EecCCceeE-EecCCCCCCCCCeEEEEEEEeeecchhhHHHc-CCCC--CCCCCceecccceEEEEEeccCccccCC---
Confidence            334455666 55677764 56788888999999877765542 2111  1123456789999999998864333333   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        79 --------------------------------------------------------------------------------   78 (345)
T cd08286          79 --------------------------------------------------------------------------------   78 (345)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccc--eeeeCCCCCCcccccccc-hhhh
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALLE-PLSV  304 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~-~~~~  304 (408)
                           +|+|+..+...|++|.+|..+.++.|....++.....+|+|++|+.++++  .++++|++++..+++.+. ...+
T Consensus        79 -----Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t  153 (345)
T cd08286          79 -----GDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT  153 (345)
T ss_pred             -----CCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence                 89998888888999999999999999876554333457999999999987  899999999988888776 5567


Q ss_pred             hhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413         305 GVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       305 ~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      +++.+ ....+++++++||+|+|++|++++|+++.+|+.+++++++++++.+.++++|++.++++++    .+..+.+.+
T Consensus       154 a~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~----~~~~~~i~~  229 (345)
T cd08286         154 GYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK----GDAIEQVLE  229 (345)
T ss_pred             HHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc----ccHHHHHHH
Confidence            77754 5667899999999877999999999999999656888888899999999999999999876    456667777


Q ss_pred             HhcCCCCceEEEcccchhhhh
Q psy1413         384 LLQGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       384 ~~~~~~~d~i~d~~g~~~~~~  404 (408)
                      ++.++++|++|||+|+...++
T Consensus       230 ~~~~~~~d~vld~~g~~~~~~  250 (345)
T cd08286         230 LTDGRGVDVVIEAVGIPATFE  250 (345)
T ss_pred             HhCCCCCCEEEECCCCHHHHH
Confidence            777788999999998755543

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.83  E-value=7.6e-20  Score=175.42  Aligned_cols=226  Identities=23%  Similarity=0.332  Sum_probs=166.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++++|++|++.+. +.   ++..+|.++|||++|+|+++|++|+.+++||+|+..+...                   
T Consensus        32 v~~~~i~~~d~~~~~-g~---~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (344)
T cd08284          32 VTAAAICGSDLHIYR-GH---IPSTPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGG  107 (344)
T ss_pred             EEEeeccccchhhhc-CC---CCCCCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCc
Confidence            468999999999874 32   3345688999999999999999999999999998754111                   


Q ss_pred             ------------------cccC--CcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCcccccccccc
Q psy1413          62 ------------------NVCL--SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDP  121 (408)
Q Consensus        62 ------------------~~~~--~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a  121 (408)
                                        ....  ..++..|+++++++.+.++..+.+++.+.....-..++.++|+|+|.+|+++++++
T Consensus       108 ~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a  187 (344)
T cd08284         108 LFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSA  187 (344)
T ss_pred             cccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhHhcCCccCCEEEEECCcHHHHHHHHHH
Confidence                              1111  36667777777755666666666665433222222578899999999999999988


Q ss_pred             ccccC-c-----------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEcc
Q psy1413         122 MIVGH-E-----------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGA  156 (408)
Q Consensus       122 ~~~G~-~-----------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~  156 (408)
                      +.+|+ .                                         ++.++++++..   ...+++++++|+++.+|.
T Consensus       188 ~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~  267 (344)
T cd08284         188 QVLGAARVFAVDPVPERLERAAALGAEPINFEDAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGV  267 (344)
T ss_pred             HHcCCceEEEEcCCHHHHHHHHHhCCeEEecCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECc
Confidence            88874 2                                         22233333321   156899999999999997


Q ss_pred             CC-CCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         157 GS-QDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       157 ~~-~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .. ....++....+.+++++.+..... ..+++++++++++++++.++++++|++++++++|+.+.+++.  .|++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~--~k~Vi~  343 (344)
T cd08284         268 HTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV--LKVVLD  343 (344)
T ss_pred             CCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc--eEEEec
Confidence            65 344555666778889987654333 789999999999999877788999999999999999887544  677764

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.83  E-value=2.3e-20  Score=178.56  Aligned_cols=224  Identities=21%  Similarity=0.239  Sum_probs=160.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP----------------------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~----------------------   58 (408)
                      |.++|||++|++.+. +.+  ...++|.++|||++|+|+++|++++.|++||+|++.+                      
T Consensus        31 v~a~~i~~~d~~~~~-g~~--~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (337)
T cd05283          31 ITYCGVCHSDLHTLR-NEW--GPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKG  107 (337)
T ss_pred             EEEecccchHHHHhc-CCc--CCCCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcch
Confidence            468999999999884 332  2345689999999999999999999999999997421                      


Q ss_pred             -------------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCcccccccc
Q psy1413          59 -------------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLS  119 (408)
Q Consensus        59 -------------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~  119 (408)
                                         ++...+...++..|+++++++.+.++....+++.+.....-..+++++|.|+|.+|+++++
T Consensus       108 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~  187 (337)
T cd05283         108 VVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVGPGKRVGVVGIGGLGHLAVK  187 (337)
T ss_pred             hhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHH
Confidence                               1112223344455555555433434333333332111111124778999889999998888


Q ss_pred             ccccccC-------------------------------------cceeEEEccCch---HHHHhhccCCcEEEEEccCCC
Q psy1413         120 DPMIVGH-------------------------------------EASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQ  159 (408)
Q Consensus       120 ~a~~~G~-------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~  159 (408)
                      +++.+|+                                     .++.++++++..   .+.+++++++|+++.+|....
T Consensus       188 ~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  267 (337)
T cd05283         188 FAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEE  267 (337)
T ss_pred             HHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCC
Confidence            8876664                                     134455555533   367899999999999998766


Q ss_pred             CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         160 DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       160 ~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      ...++...++.+++++.+.+... +++++++++++++++++  . .+.|+++++++||+.+++++. .+|+|+
T Consensus       268 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~-~~k~v~  336 (337)
T cd05283         268 PLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKP--W-VEVIPMDGINEALERLEKGDV-RYRFVL  336 (337)
T ss_pred             CCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCcc--c-eEEEEHHHHHHHHHHHHcCCC-cceEee
Confidence            55777778888999999988766 78999999999999864  3 478999999999999998754 456654

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.83  E-value=3.6e-20  Score=177.50  Aligned_cols=229  Identities=24%  Similarity=0.360  Sum_probs=158.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      ++++++|++|++++..+........+|.++|||++|+|+++|++++.+++||+|+..+.+                    
T Consensus        32 v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (341)
T PRK05396         32 VKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTK  111 (341)
T ss_pred             EEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcc
Confidence            468999999999874332222233578899999999999999999999999999875322                    


Q ss_pred             -------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCc
Q psy1413          61 -------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE  127 (408)
Q Consensus        61 -------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~  127 (408)
                                   ...+...++..|+++++++.+ ...++..+...... ....+++++|.++|.+|++++++++.+|+.
T Consensus       112 ~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~-~~~~~~~~~~~~~~-~~~~g~~vlV~~~g~vg~~~~~la~~~G~~  189 (341)
T PRK05396        112 GVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAA-IFDPFGNAVHTALS-FDLVGEDVLITGAGPIGIMAAAVAKHVGAR  189 (341)
T ss_pred             eeeecCCCcceeeEEechHHeEECcCCCCHHHhH-hhhHHHHHHHHHHc-CCCCCCeEEEECCCHHHHHHHHHHHHcCCC
Confidence                         122223344455555542222 22221111110011 123588999988999999998888877752


Q ss_pred             -------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCc
Q psy1413         128 -------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDV  161 (408)
Q Consensus       128 -------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~  161 (408)
                                                                 ++.++++.|+.   ...+++++++|+++.+|......
T Consensus       190 ~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~  269 (341)
T PRK05396        190 HVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDM  269 (341)
T ss_pred             EEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC
Confidence                                                       22233334322   15688999999999999876666


Q ss_pred             ccCHHHHHhcCcEEEEeecCC--CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         162 KIPLVLTMTKEIDIRGVFRYA--NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       162 ~~~~~~~~~~~~~l~g~~~~~--~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      +++...+.++++++.+.....  ..+..++++++++ +++.+++.+.|+++++.+||+.+.+++  .+|++++++
T Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~--~gk~vv~~~  341 (341)
T PRK05396        270 AIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQ--SGKVILDWD  341 (341)
T ss_pred             cccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCC--CceEEEecC
Confidence            666677889999998875332  4567789999998 656677899999999999999998764  588888764

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=99.82  E-value=8e-20  Score=177.04  Aligned_cols=225  Identities=21%  Similarity=0.245  Sum_probs=149.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |.++|||++|++.+. |.   .+..+|+++|||++|+|+++|++++.+++||||+..+...                   
T Consensus        39 v~~~gi~~~D~~~~~-g~---~~~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~  114 (373)
T cd08299          39 IVATGICRSDDHVVS-GK---LVTPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKND  114 (373)
T ss_pred             EEEEEcCcccHHHhc-CC---CCCCCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcc
Confidence            468999999999984 33   2346789999999999999999999999999998753211                   


Q ss_pred             -----------------------------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeE
Q psy1413          62 -----------------------------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDV  105 (408)
Q Consensus        62 -----------------------------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~v  105 (408)
                                                         ..+...++..|+.+++++.+.++.++.+++.+......+ .++++
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~V  194 (373)
T cd08299         115 LGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTC  194 (373)
T ss_pred             cccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEE
Confidence                                               111222333344444433333332333322111111122 47889


Q ss_pred             EEEccCccccccccccccccC-c-------------------------------------------ceeEEEccCchH--
Q psy1413         106 HYLTHGQIGDFRLSDPMIVGH-E-------------------------------------------ASGIVSKVGAKV--  139 (408)
Q Consensus       106 lv~g~G~vG~~~i~~a~~~G~-~-------------------------------------------~~~vv~~~g~~~--  139 (408)
                      +|+|+|++|++++++++.+|+ .                                           ++.+++++|...  
T Consensus       195 lV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~  274 (373)
T cd08299         195 AVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTM  274 (373)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHH
Confidence            999999999998888777665 1                                           223444444321  


Q ss_pred             -HHHhhc-cCCcEEEEEccCCCC--cccCHHHHHhcCcEEEEeecCC----CcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413         140 -KHLKAT-RPGGCLVIVGAGSQD--VKIPLVLTMTKEIDIRGVFRYA----NDYPIALAMVASGKVDVKKLITHNYLLED  211 (408)
Q Consensus       140 -~~~~~l-~~gG~iv~~G~~~~~--~~~~~~~~~~~~~~l~g~~~~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~  211 (408)
                       ++++.+ +++|+++.+|.....  .+++.. .+.++.++.+.+...    .++.++++++.++.++++++++++|+++|
T Consensus       275 ~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e  353 (373)
T cd08299         275 KAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEK  353 (373)
T ss_pred             HHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHH
Confidence             334444 579999999976543  344443 345778888876542    46778888888888888888999999999


Q ss_pred             HHHHHHHHHcCCCCceEEEEE
Q psy1413         212 TLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       212 ~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +.+||+.+.+++  ..|++++
T Consensus       354 ~~~a~~~~~~~~--~~k~~~~  372 (373)
T cd08299         354 INEGFDLLRSGK--SIRTVLT  372 (373)
T ss_pred             HHHHHHHHhCCC--cceEEEe
Confidence            999999988754  3566653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.82  E-value=2.1e-19  Score=170.59  Aligned_cols=223  Identities=26%  Similarity=0.451  Sum_probs=180.0

Q ss_pred             eccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCc
Q psy1413          70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGG  149 (408)
Q Consensus        70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG  149 (408)
                      ..+..+.+ ...++|.+.+..+++++.+.+++..++.+. .|..     ..+...|.++.|++..+|+.   +..     
T Consensus         7 ~~~~~~~~-~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~-~g~~-----~~~~~~G~e~~G~Vv~~G~~---~~~-----   71 (319)
T cd08242           7 DGGLDLRV-EDLPKPEPPPGEALVRVLLAGICNTDLEIY-KGYY-----PFPGVPGHEFVGIVEEGPEA---ELV-----   71 (319)
T ss_pred             eCCCcEEE-EECCCCCCCCCeEEEEEEEEEEccccHHHH-cCCC-----CCCCccCceEEEEEEEeCCC---CCC-----
Confidence            33445666 567788888888999999999987776554 2221     13456799999999999863   222     


Q ss_pred             EEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEE
Q psy1413         150 CLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV  229 (408)
Q Consensus       150 ~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kv  229 (408)
                                                                                                      
T Consensus        72 --------------------------------------------------------------------------------   71 (319)
T cd08242          72 --------------------------------------------------------------------------------   71 (319)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhh
Q psy1413         230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHAC  309 (408)
Q Consensus       230 vi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~  309 (408)
                         +|+|...+..+|+.|.+|..+.+++|.+...++....+|+|++|..++.+.++++|++++.++++.+.++.+++..+
T Consensus        72 ---G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~  148 (319)
T cd08242          72 ---GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEIL  148 (319)
T ss_pred             ---CCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHH
Confidence               89998888889999999999999999998877765568999999999999999999999988877644455556556


Q ss_pred             hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         310 RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       310 ~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      +...++++++++|+|+|++|++++|+++.+|++ ++++++++++.+.++++|++.++++++    .         +.+++
T Consensus       149 ~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~----~---------~~~~~  214 (319)
T cd08242         149 EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEA----E---------SEGGG  214 (319)
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCccc----c---------ccCCC
Confidence            777889999999997799999999999999999 888888899999999999998887643    1         35678


Q ss_pred             CceEEEcccchhhhh
Q psy1413         390 PDKTIDCSGIESTIK  404 (408)
Q Consensus       390 ~d~i~d~~g~~~~~~  404 (408)
                      +|.+|||+|+...+.
T Consensus       215 ~d~vid~~g~~~~~~  229 (319)
T cd08242         215 FDVVVEATGSPSGLE  229 (319)
T ss_pred             CCEEEECCCChHHHH
Confidence            999999998755443

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.82  E-value=2.6e-19  Score=171.62  Aligned_cols=235  Identities=38%  Similarity=0.659  Sum_probs=186.4

Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL  151 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i  151 (408)
                      +..+.+ ...++|...+..+++++.+++++..++.+.- |..+  ........|.++.|++..+|+..+.++.       
T Consensus         9 ~~~~~~-~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~-g~~~--~~~~~~~~g~~~~G~V~~~G~~v~~~~~-------   77 (343)
T cd08235           9 PNDVRL-EEVPVPEPGPGEVLVKVRACGICGTDVKKIR-GGHT--DLKPPRILGHEIAGEIVEVGDGVTGFKV-------   77 (343)
T ss_pred             CCceEE-EEccCCCCCCCeEEEEEEEeeeccccHHHHc-CCCc--cCCCCcccccceEEEEEeeCCCCCCCCC-------
Confidence            334555 4456666667778888888888877665531 1111  1123446789999999999865333333       


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (343)
T cd08235          78 --------------------------------------------------------------------------------   77 (343)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccce-----eeeCCCCCCcccccccchhhhhh
Q psy1413         232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF-----CHKLPDHVSLEEGALLEPLSVGV  306 (408)
Q Consensus       232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa~~~~~~~~~  306 (408)
                       +|+|...+..+|++|..|..++.++|.+..+++.. .+|+|++|+.++++.     ++++|++++..+++.+.++.+++
T Consensus        78 -Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~a~  155 (343)
T cd08235          78 -GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNL-YDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCI  155 (343)
T ss_pred             -CCEEEEccCCCCCCChHHHCcCcccCCCcceeccC-CCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHHHHHH
Confidence             88998888888999999999999999988776653 579999999999998     99999999988887666777888


Q ss_pred             hhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         307 HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       307 ~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      +++....++++++++|+|+|++|+.++|+++.+|++.++++++++++.+.++++|++.++++++    .++.+.+++.+.
T Consensus       156 ~~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~----~~~~~~i~~~~~  231 (343)
T cd08235         156 NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE----EDLVEKVRELTD  231 (343)
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc----cCHHHHHHHHhC
Confidence            8886668899999999977999999999999999997788888889998888999999998876    566677777787


Q ss_pred             CCCCceEEEcccchhhh
Q psy1413         387 GEQPDKTIDCSGIESTI  403 (408)
Q Consensus       387 ~~~~d~i~d~~g~~~~~  403 (408)
                      ++++|++|||+|+....
T Consensus       232 ~~~vd~vld~~~~~~~~  248 (343)
T cd08235         232 GRGADVVIVATGSPEAQ  248 (343)
T ss_pred             CcCCCEEEECCCChHHH
Confidence            78899999999965443

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.82  E-value=2.7e-19  Score=172.91  Aligned_cols=233  Identities=32%  Similarity=0.540  Sum_probs=181.4

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ ...++|.+.+..+.+.+.+++++..++.+. .|..+   .......|.++.|++..+|.....++.          
T Consensus        13 ~~~-~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~-~g~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~----------   77 (363)
T cd08279          13 LEI-EEVELDDPGPGEVLVRIAAAGLCHSDLHVV-TGDLP---APLPAVLGHEGAGVVEEVGPGVTGVKP----------   77 (363)
T ss_pred             ceE-EEeeCCCCCCCeEEEEEEEeecCcHHHHHh-cCCCC---CCCCccccccceEEEEEeCCCccccCC----------
Confidence            344 445667777778888888888877665543 22222   122346788999999998865333333          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    ++
T Consensus        78 ------------------------------------------------------------------------------Gd   79 (363)
T cd08279          78 ------------------------------------------------------------------------------GD   79 (363)
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          89


Q ss_pred             ceeecCCCcccccccccCCccccccceeec--cc-------------C----CCCccceeEEeeccceeeeCCCCCCccc
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFC--AT-------------P----PDHGNLSRYYRHAADFCHKLPDHVSLEE  295 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------------~----~~~g~~~~~~~~~~~~~~~~p~~~~~~~  295 (408)
                      +|...+..+|++|.+|.+++.+.|.+....  +.             .    ...|+|++|+.++++.++++|+++++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~  159 (363)
T cd08279          80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR  159 (363)
T ss_pred             EEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence            998888889999999999999999765321  10             0    1358999999999999999999999988


Q ss_pred             ccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCC
Q psy1413         296 GALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHS  373 (408)
Q Consensus       296 aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~  373 (408)
                      ++.++ .+.++++++ ....++++++++|+|+|++|++++++++.+|+++|+.+++++++.+.++++|++++++.+.   
T Consensus       160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~---  236 (363)
T cd08279         160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE---  236 (363)
T ss_pred             eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC---
Confidence            88777 566777775 5577899999999966999999999999999987888889999999999999999998776   


Q ss_pred             hHHHHHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413         374 LEEISTHIIELLQGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       374 ~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~  404 (408)
                       .+..+.+++++.++++|++||++|+.....
T Consensus       237 -~~~~~~l~~~~~~~~vd~vld~~~~~~~~~  266 (363)
T cd08279         237 -DDAVEAVRDLTDGRGADYAFEAVGRAATIR  266 (363)
T ss_pred             -ccHHHHHHHHcCCCCCCEEEEcCCChHHHH
Confidence             566677777776778999999999654433

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=99.82  E-value=2.9e-20  Score=178.37  Aligned_cols=227  Identities=14%  Similarity=0.087  Sum_probs=161.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccC--CccEEEEEeCCCCCCCCCCCEEEEcc---CcccccCC--cc--eec
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH--EASGIVSKVGAKVKHLKVDNQTRFVP---EFRNVCLS--PI--LRR   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~Gh--E~~G~Vv~vG~~v~~~~vGdrV~~~~---~~~~~~~~--~~--~~~   71 (408)
                      |++++||+.|.... .++..  ...+|.++|+  |++|+|..+|++|++|++||||....   ++......  .+  +..
T Consensus        50 v~a~~inp~~~~~~-~~~~~--~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~  126 (348)
T PLN03154         50 NLYLSCDPYMRGRM-RDFHD--SYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQL  126 (348)
T ss_pred             EEEEccCHHHHHhh-hccCC--CCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEecCCcEEEEEEeccccceEEccC
Confidence            46899999987643 22111  1235889998  88999999999999999999998543   33333332  23  234


Q ss_pred             cceeeec-ccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccCc---------------------
Q psy1413          72 RFSLRFR-EQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGHE---------------------  127 (408)
Q Consensus        72 p~~~~~~-~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~~---------------------  127 (408)
                      |+.++++ +.+.++.+..+++.+......+ .+++++|.|+ |++|++++|+++.+|+.                     
T Consensus       127 P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~  206 (348)
T PLN03154        127 QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD  206 (348)
T ss_pred             cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCC
Confidence            7777774 3456676666665432222222 4789999986 99999999988877651                     


Q ss_pred             ----------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-Cc-----ccCHHHHHhcCcEEEE
Q psy1413         128 ----------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DV-----KIPLVLTMTKEIDIRG  177 (408)
Q Consensus       128 ----------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~-----~~~~~~~~~~~~~l~g  177 (408)
                                            ++.+++++|...  +++++++++|+++.+|.... +.     .++...+++|++++.|
T Consensus       207 ~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g  286 (348)
T PLN03154        207 EAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQG  286 (348)
T ss_pred             EEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEE
Confidence                                  233444444322  57899999999999997543 22     1356678899999999


Q ss_pred             eecCC------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         178 VFRYA------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       178 ~~~~~------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      ++...      +.++++++++++|++++  .++++|+|+|+++||+.+.+++. .+|++++.
T Consensus       287 ~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l~~g~~-~GKvVl~~  345 (348)
T PLN03154        287 FLQSDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGLFSGKN-VGKQVIRV  345 (348)
T ss_pred             EEHHHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHHHcCCC-CceEEEEe
Confidence            87542      45788999999999974  47789999999999999999864 56777764

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.82  E-value=3.8e-19  Score=170.33  Aligned_cols=235  Identities=32%  Similarity=0.568  Sum_probs=181.8

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ ++.+.|.+.+..+.+++.+.+++..++.+...+.............|.++.|.+..+|+....++.          
T Consensus        11 ~~l-~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~----------   79 (340)
T TIGR00692        11 AEL-TEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKV----------   79 (340)
T ss_pred             cEE-EECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCC----------
Confidence            444 445667777788888888998887776553211111111223445789999999999865333333          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    +|
T Consensus        80 ------------------------------------------------------------------------------Gd   81 (340)
T TIGR00692        80 ------------------------------------------------------------------------------GD   81 (340)
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          89


Q ss_pred             ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCc
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGV  314 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~  314 (408)
                      +|...+...|+.|..|..+.++.|.+..+++.. ..|+|++|..++++.++++|++++.+.++...++.++++++ ....
T Consensus        82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~  159 (340)
T TIGR00692        82 YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVD-TDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGP  159 (340)
T ss_pred             EEEECCcCCCCCChhhhCcChhhCcCcceEeec-CCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccC
Confidence            998888889999999999999999997665432 57999999999999999999999987666555777777765 2346


Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .++++++|.|+|++|+.++|+++.+|+++|+++++++++.+.++++|++.+++.+.    .++.+.+.+++.++++|++|
T Consensus       160 ~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~----~~~~~~l~~~~~~~~~d~vl  235 (340)
T TIGR00692       160 ISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK----EDVVKEVADLTDGEGVDVFL  235 (340)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc----cCHHHHHHHhcCCCCCCEEE
Confidence            78999999777999999999999999987888888888899999999999998766    56777777777778999999


Q ss_pred             Ecccchhhhh
Q psy1413         395 DCSGIESTIK  404 (408)
Q Consensus       395 d~~g~~~~~~  404 (408)
                      ||+|+...++
T Consensus       236 d~~g~~~~~~  245 (340)
T TIGR00692       236 EMSGAPKALE  245 (340)
T ss_pred             ECCCCHHHHH
Confidence            9988755444

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.82  E-value=1.1e-19  Score=174.47  Aligned_cols=225  Identities=20%  Similarity=0.278  Sum_probs=156.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      +.++|+|++|++.+. |.   ++..+|.++|||++|+|+++|++|+.+++||||+.....                    
T Consensus        32 v~~~~i~~~d~~~~~-g~---~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (345)
T cd08287          32 VVATCVCGSDLWPYR-GV---SPTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGG  107 (345)
T ss_pred             Eeeeeecccchhhhc-CC---CCCCCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCC
Confidence            468999999999884 33   223458899999999999999999999999999862111                    


Q ss_pred             -------------ccccC--CcceeccceeeecccccCC------CCCCcceEEEEeeeeecCCeEEEEccCcccccccc
Q psy1413          61 -------------RNVCL--SPILRRRFSLRFREQKPIE------DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLS  119 (408)
Q Consensus        61 -------------~~~~~--~~~~~~p~~~~~~~~~~lp------~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~  119 (408)
                                   ...+.  +.+++.|+++++ +....+      ..+.+++.+.....-..+++++|.|+|.+|+++++
T Consensus       108 ~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~-~~~~~~~~~~l~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~  186 (345)
T cd08287         108 FWGAFVDGGQGEYVRVPLADGTLVKVPGSPSD-DEDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVL  186 (345)
T ss_pred             cccCCCCCceEEEEEcchhhCceEECCCCCCh-hhhhhhhhHhhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH
Confidence                         11111  133444444443 111111      11111111110111124788999899999999999


Q ss_pred             ccccccCc-------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEE
Q psy1413         120 DPMIVGHE-------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVI  153 (408)
Q Consensus       120 ~a~~~G~~-------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~  153 (408)
                      +++.+|..                                           ++.+++++|+.   ..++++++++|+++.
T Consensus       187 lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~  266 (345)
T cd08287         187 AAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGY  266 (345)
T ss_pred             HHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEE
Confidence            88877752                                           33445555432   257899999999999


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +|.+..+..++....+.+++++.+..... ..+++++++++++++++.++++++++++++.+|++.+.+++  ..|++++
T Consensus       267 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~--~~k~~~~  344 (345)
T cd08287         267 VGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERR--AIKVLLR  344 (345)
T ss_pred             ecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCC--ceEEEeC
Confidence            99776556666666788999998866554 67999999999999988778899999999999999988654  3477764

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.81  E-value=7.7e-19  Score=166.86  Aligned_cols=127  Identities=26%  Similarity=0.274  Sum_probs=107.2

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      |+|++|..++.+.++++|++++.++++.++ ...+++.......++++++++|+|+ |++|+.++++++.+|++ ++.++
T Consensus        96 g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~-v~~~~  174 (324)
T cd08244          96 GGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGAT-VVGAA  174 (324)
T ss_pred             ceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEe
Confidence            567889999999999999999988887666 4555643446678899999999998 99999999999999997 88888


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      +++++.+.++++|++.+++.++    .+..+.+.+.++++++|+++||+|+...
T Consensus       175 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vl~~~g~~~~  224 (324)
T cd08244         175 GGPAKTALVRALGADVAVDYTR----PDWPDQVREALGGGGVTVVLDGVGGAIG  224 (324)
T ss_pred             CCHHHHHHHHHcCCCEEEecCC----ccHHHHHHHHcCCCCceEEEECCChHhH
Confidence            8999999999999999998776    5566677777777889999999997653

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=99.81  E-value=1.2e-19  Score=173.80  Aligned_cols=225  Identities=25%  Similarity=0.339  Sum_probs=164.6

Q ss_pred             CCeeeecccchhhhhcCCCCC-CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------------------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~-~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------------------   58 (408)
                      |.++++|++|++.+. |.+.. .+..+|.++|||++|+|+++|++|..+++||||+..+                     
T Consensus        32 v~~~~i~~~d~~~~~-g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~  110 (340)
T cd05284          32 VGGAGVCHSDLHVID-GVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENA  110 (340)
T ss_pred             EEEEeecchhHHHHc-CCCcccccCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCC
Confidence            468999999999874 33222 3456789999999999999999999999999998654                     


Q ss_pred             ------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEee--eeecCCeEEEEccCccccccccccccc
Q psy1413          59 ------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHC--VGICGSDVHYLTHGQIGDFRLSDPMIV  124 (408)
Q Consensus        59 ------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~--~~~~g~~vlv~g~G~vG~~~i~~a~~~  124 (408)
                                  ++...+..+++..|+++++++.+.++..+.+++.+....  ....+++++|+|+|++|++++++++.+
T Consensus       111 ~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~  190 (340)
T cd05284         111 RFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRAL  190 (340)
T ss_pred             cccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHh
Confidence                        222344456667777777766666666655555322111  112478899999888999998888877


Q ss_pred             c-Cc-----------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCC
Q psy1413         125 G-HE-----------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQ  159 (408)
Q Consensus       125 G-~~-----------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~  159 (408)
                      | ..                                         ++.+++++|..   .+.+++++++|+++.+|....
T Consensus       191 g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~  270 (340)
T cd05284         191 TPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH  270 (340)
T ss_pred             CCCcEEEEeCCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC
Confidence            6 32                                         33445555532   257899999999999997654


Q ss_pred             CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         160 DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       160 ~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                       ..++...++.+++++.+..... ..+.+++++++++.+++   ..+.|+++++++||+.+++++. .+|+++
T Consensus       271 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~-~gkvv~  338 (340)
T cd05284         271 -GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRV-TGRAVL  338 (340)
T ss_pred             -CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCc-cceEEe
Confidence             4555555568999999876544 78899999999998864   4568999999999999997753 445544

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=99.81  E-value=1.2e-19  Score=175.54  Aligned_cols=226  Identities=26%  Similarity=0.398  Sum_probs=165.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCC---CCCCCEEEEccC------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH---LKVDNQTRFVPE------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~---~~vGdrV~~~~~------------------   59 (408)
                      |.++|||++|++.+. +.   ++..+|.++|||++|+|+++|+++..   +++||+|+..+.                  
T Consensus        32 v~~~~l~~~d~~~~~-~~---~~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~  107 (367)
T cd08263          32 VAACGVCHSDLHVLK-GE---LPFPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCE  107 (367)
T ss_pred             EEEeeeCcchHHHhc-CC---CCCCCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCc
Confidence            458999999999874 32   33467889999999999999999988   999999987321                  


Q ss_pred             -------------------------------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ec
Q psy1413          60 -------------------------------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-IC  101 (408)
Q Consensus        60 -------------------------------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~  101 (408)
                                                           +...+...++..|+++++.+.+.++..+.+++.+...... ..
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~  187 (367)
T cd08263         108 DFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRP  187 (367)
T ss_pred             CccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCC
Confidence                                                 1122234556667777775666666655555433222222 24


Q ss_pred             CCeEEEEccCccccccccccccccCc-------------------------------------------ceeEEEccCch
Q psy1413         102 GSDVHYLTHGQIGDFRLSDPMIVGHE-------------------------------------------ASGIVSKVGAK  138 (408)
Q Consensus       102 g~~vlv~g~G~vG~~~i~~a~~~G~~-------------------------------------------~~~vv~~~g~~  138 (408)
                      +++++|.|+|.+|++++++++.+|+.                                           ++.++++++..
T Consensus       188 g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~  267 (367)
T cd08263         188 GETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKP  267 (367)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCH
Confidence            77899999999999988888877653                                           33344554433


Q ss_pred             ---HHHHhhccCCcEEEEEccCCC--CcccCHHHHHhcCcEEEEeecCC--CcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413         139 ---VKHLKATRPGGCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRYA--NDYPIALAMVASGKVDVKKLITHNYLLED  211 (408)
Q Consensus       139 ---~~~~~~l~~gG~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~~--~~~~~~~~l~~~g~~~~~~~i~~~~~l~~  211 (408)
                         .+++++++++|+++.+|....  ...++...++.+++++.+.+...  +.+++++++++++++++.+++++.|++++
T Consensus       268 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~  347 (367)
T cd08263         268 ETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEE  347 (367)
T ss_pred             HHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHH
Confidence               257899999999999996543  45566777778999998865443  57899999999999988778899999999


Q ss_pred             HHHHHHHHHcCCCCceEEEE
Q psy1413         212 TLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       212 ~~~a~~~~~~~~~~~~kvvi  231 (408)
                      +.++|+.+++++. .+|+++
T Consensus       348 ~~~a~~~~~~~~~-~g~~~~  366 (367)
T cd08263         348 INEAYENLRKGLI-HGRAIV  366 (367)
T ss_pred             HHHHHHHHhcCCc-cceeee
Confidence            9999999988764 455554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.81  E-value=1.1e-19  Score=174.06  Aligned_cols=228  Identities=25%  Similarity=0.385  Sum_probs=160.0

Q ss_pred             CCeeeecccchhhhhcCCC--------CCCCCCCCccccCCccEEEEEeCCCCCC-CCCCCEEEEccC------------
Q psy1413           1 MHCVGICGSDVHYLTHGQI--------GDFRLSDPMIVGHEASGIVSKVGAKVKH-LKVDNQTRFVPE------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~--------~~~~~~~P~i~GhE~~G~Vv~vG~~v~~-~~vGdrV~~~~~------------   59 (408)
                      |.++|+|++|++.+.+...        ......+|.++|||++|+|+++|++++. +++||+|+..+.            
T Consensus        30 v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~  109 (341)
T cd08262          30 VLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIG  109 (341)
T ss_pred             EEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCC
Confidence            4689999999998843110        0112346889999999999999999987 999999997642            


Q ss_pred             -----------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccCc
Q psy1413          60 -----------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGHE  127 (408)
Q Consensus        60 -----------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~~  127 (408)
                                 +...+.+.++..|++++++ .+.++.++.+++.. .....+ .+++++|+|+|++|.+++++++.+|+.
T Consensus       110 ~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~-~a~~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~  187 (341)
T cd08262         110 LSPEAPGGYAEYMLLSEALLLRVPDGLSME-DAALTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVG  187 (341)
T ss_pred             CCcCCCCceeeeEEechHHeEECCCCCCHH-HhhhhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence                       2233344556667766663 33343343333322 111222 478899999999999998888877752


Q ss_pred             ----------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCC
Q psy1413         128 ----------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGS  158 (408)
Q Consensus       128 ----------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~  158 (408)
                                                                    ++.+++++|..   .+++++++++|+++.+|...
T Consensus       188 ~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~  267 (341)
T cd08262         188 PIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCM  267 (341)
T ss_pred             EEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCC
Confidence                                                          22333333331   25688999999999999765


Q ss_pred             CCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         159 QDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       159 ~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      ....+......++++++.+....+ +.+++++++++++++++.++++++|++++++++++.+.+++ ..+|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~~~kvvv  340 (341)
T cd08262         268 ESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPE-HHCKILV  340 (341)
T ss_pred             CCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCC-CceEEEe
Confidence            443344444467888888776665 68999999999999987778899999999999999999765 4566664

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.81  E-value=1.1e-18  Score=161.11  Aligned_cols=125  Identities=41%  Similarity=0.574  Sum_probs=104.7

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhcc-CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRA-GVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~-~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      .|+|++|..++++.++++|+++++++++.++ +..++++++... .++++++++|+|+|++|+.++++++.+|.+ |+++
T Consensus        86 ~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~~-v~~~  164 (271)
T cd05188          86 DGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGAR-VIVT  164 (271)
T ss_pred             CCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEE
Confidence            5789999999999999999999998888875 788888888544 448999999999955999999999999976 8889


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ++++++.+.++++|++.+++..+    .+..+.+. .+.++++|++||++|+.
T Consensus       165 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~-~~~~~~~d~vi~~~~~~  212 (271)
T cd05188         165 DRSDEKLELAKELGADHVIDYKE----EDLEEELR-LTGGGGADVVIDAVGGP  212 (271)
T ss_pred             cCCHHHHHHHHHhCCceeccCCc----CCHHHHHH-HhcCCCCCEEEECCCCH
Confidence            99999999999999999988766    33444444 55567899999999973

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.81  E-value=8.5e-20  Score=173.24  Aligned_cols=217  Identities=25%  Similarity=0.307  Sum_probs=152.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++++|++|++.+. |.   .  ++|.++|||++|+|+++|++   +++||||...+...                   
T Consensus        31 v~a~~i~~~d~~~~~-g~---~--~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (319)
T cd08242          31 VLLAGICNTDLEIYK-GY---Y--PFPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRT  101 (319)
T ss_pred             EEEEEEccccHHHHc-CC---C--CCCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCc
Confidence            468999999999884 32   2  36889999999999999997   78999997543221                   


Q ss_pred             ---------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          62 ---------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        62 ---------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                     ..+...++..|+.+++++.+.+ .+...++ .......+ .+++++|+|+|.+|++++++++.+|
T Consensus       102 ~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~-~~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G  179 (319)
T cd08242         102 VLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAAL-EILEQVPITPGDKVAVLGDGKLGLLIAQVLALTG  179 (319)
T ss_pred             ccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHH-HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                           1111122333333333211111 1111111 00011111 4788999999999999999988877


Q ss_pred             Cc---------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcccCHHHHH
Q psy1413         126 HE---------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVKIPLVLTM  169 (408)
Q Consensus       126 ~~---------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~  169 (408)
                      ++                                 ++.+++++|..   ...+++++++|+++..+.......++...+.
T Consensus       180 ~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~  259 (319)
T cd08242         180 PDVVLVGRHSEKLALARRLGVETVLPDEAESEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAV  259 (319)
T ss_pred             CeEEEEcCCHHHHHHHHHcCCcEEeCccccccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHhe
Confidence            53                                 34556666542   2568899999999998876666777777888


Q ss_pred             hcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         170 TKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       170 ~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +++.++.+.+..  .+++++++++++++++.++++++|+++++++||+.++.+.  .+|++++
T Consensus       260 ~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~--~~k~vi~  318 (319)
T cd08242         260 VNEITLVGSRCG--PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG--ALKVLLR  318 (319)
T ss_pred             ecceEEEEEecc--cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC--ceEEEeC
Confidence            999999887543  3899999999999987778999999999999999998664  4687765

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.81  E-value=2.2e-19  Score=172.64  Aligned_cols=227  Identities=20%  Similarity=0.255  Sum_probs=161.5

Q ss_pred             CCeeeecccchhhhhcCCCCC----------CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc---------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGD----------FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR---------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~----------~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~---------   61 (408)
                      +.++|+|++|++.+. +.++.          ....+|.++|||++|+|+++|++++.+++||+|+..+...         
T Consensus        32 v~~~~i~~~d~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~  110 (350)
T cd08240          32 VTACGVCHSDLHIWD-GGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLA  110 (350)
T ss_pred             EEEEecCchhHHHHc-CCCCccccccccccccCCCCCcccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHC
Confidence            468999999999874 33221          0224578999999999999999999999999998764221         


Q ss_pred             ------------------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccc
Q psy1413          62 ------------------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDF  116 (408)
Q Consensus        62 ------------------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~  116 (408)
                                              ..+...++..|+++++.+++.++..+.+++.+....... .+++++|+|+|.+|++
T Consensus       111 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~  190 (350)
T cd08240         111 GDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLM  190 (350)
T ss_pred             cCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHH
Confidence                                    222233445566665544444444444443221111122 4788999999999999


Q ss_pred             cccccccccCc------------------------------------------ceeEEEccCch---HHHHhhccCCcEE
Q psy1413         117 RLSDPMIVGHE------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCL  151 (408)
Q Consensus       117 ~i~~a~~~G~~------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~i  151 (408)
                      ++++++.+|++                                          ++.+++++|..   ..++++|+++|++
T Consensus       191 ~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~  270 (350)
T cd08240         191 ALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKL  270 (350)
T ss_pred             HHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeE
Confidence            99988887762                                          23344444432   2578999999999


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                      +.+|.......++...+.++++++.+.+... +++.+++++++++.+++.  ..+.|+++++++||+.+.+++ ..+|++
T Consensus       271 v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~-~~gkvv  347 (350)
T cd08240         271 VLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGK-VVGRAV  347 (350)
T ss_pred             EEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCC-ccceEE
Confidence            9999876655566666777999999988766 789999999999988643  677899999999999998775 345665


Q ss_pred             E
Q psy1413         231 I  231 (408)
Q Consensus       231 i  231 (408)
                      +
T Consensus       348 v  348 (350)
T cd08240         348 L  348 (350)
T ss_pred             e
Confidence            4

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.81  E-value=1.4e-19  Score=174.06  Aligned_cols=226  Identities=23%  Similarity=0.274  Sum_probs=155.8

Q ss_pred             CCeeeecccchhhhhcCCCCC-------CCCCCCccccCCccEEEEEeCCCCC--CCCCCCEEEEccCcccc--------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGD-------FRLSDPMIVGHEASGIVSKVGAKVK--HLKVDNQTRFVPEFRNV--------   63 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~-------~~~~~P~i~GhE~~G~Vv~vG~~v~--~~~vGdrV~~~~~~~~~--------   63 (408)
                      +.++|||++|++.+. |....       ...++|.++|||++|+|+++|++|+  .|++||+|+..+...+.        
T Consensus        31 v~a~~i~~~d~~~~~-g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~  109 (350)
T cd08256          31 VEACGICAGDIKCYH-GAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRG  109 (350)
T ss_pred             EEEEEEcccchhhhc-CCCccccccccCccCCCCcccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCc
Confidence            468999999999874 32110       1124688999999999999999999  89999999874322111        


Q ss_pred             ---------------------------cCC-cceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccc
Q psy1413          64 ---------------------------CLS-PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIG  114 (408)
Q Consensus        64 ---------------------------~~~-~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG  114 (408)
                                                 +.+ .++..|+++++++.+.+ .++.+++.+. ....+ .+++++|.|+|.+|
T Consensus       110 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG  187 (350)
T cd08256         110 QYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLG  187 (350)
T ss_pred             CcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHH
Confidence                                       111 22334444443222222 2222222111 11112 47788888899999


Q ss_pred             cccccccccccC-------------------------------------------cceeEEEccCch---HHHHhhccCC
Q psy1413         115 DFRLSDPMIVGH-------------------------------------------EASGIVSKVGAK---VKHLKATRPG  148 (408)
Q Consensus       115 ~~~i~~a~~~G~-------------------------------------------~~~~vv~~~g~~---~~~~~~l~~g  148 (408)
                      ++++++++.+|+                                           .++.+++++|..   ...+++++++
T Consensus       188 ~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~  267 (350)
T cd08256         188 LGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL  267 (350)
T ss_pred             HHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC
Confidence            999888887774                                           145556666532   2578999999


Q ss_pred             cEEEEEccCCCCcccCHHHH-HhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         149 GCLVIVGAGSQDVKIPLVLT-MTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       149 G~iv~~G~~~~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                      |+++.+|.......++...+ ..+++++.++......+.+++++++++.+++.++++++|+++++.+||+.+.++.. ..
T Consensus       268 G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~  346 (350)
T cd08256         268 GRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDD-SI  346 (350)
T ss_pred             CEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCC-ce
Confidence            99999997665555555544 46788898887766789999999999999887778999999999999999997653 44


Q ss_pred             EEE
Q psy1413         228 KVM  230 (408)
Q Consensus       228 kvv  230 (408)
                      |++
T Consensus       347 kvv  349 (350)
T cd08256         347 KVV  349 (350)
T ss_pred             EEe
Confidence            544

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=99.81  E-value=8.1e-19  Score=169.86  Aligned_cols=231  Identities=33%  Similarity=0.554  Sum_probs=181.6

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHH---HhhccCCcEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH---LKATRPGGCL  151 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~---~~~l~~gG~i  151 (408)
                      +.+ +..++|.+.+..+.+.+..++++..++.+. .|...   .......|.++.|++..+|+..+.   ++.       
T Consensus        13 ~~~-~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~-~~~~~---~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~-------   80 (367)
T cd08263          13 LTI-EEIPVPRPKEGEILIRVAACGVCHSDLHVL-KGELP---FPPPFVLGHEISGEVVEVGPNVENPYGLSV-------   80 (367)
T ss_pred             cEE-EEeeCCCCCCCeEEEEEEEeeeCcchHHHh-cCCCC---CCCCcccccccceEEEEeCCCCCCCCcCCC-------
Confidence            455 445667667778888888999887766553 22211   123446789999999999864222   222       


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                                                                                                      
T Consensus        81 --------------------------------------------------------------------------------   80 (367)
T cd08263          81 --------------------------------------------------------------------------------   80 (367)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCceeecCCCcccccccccCCccccccceeec---------------cc------CCCCccceeEEeeccceeeeCCCC
Q psy1413         232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---------------AT------PPDHGNLSRYYRHAADFCHKLPDH  290 (408)
Q Consensus       232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~------~~~~g~~~~~~~~~~~~~~~~p~~  290 (408)
                       +++|...+..+|+.|.+|..+.+++|.+...+               ..      ...+|+|++|+.++++.++++|++
T Consensus        81 -Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~  159 (367)
T cd08263          81 -GDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPES  159 (367)
T ss_pred             -CCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCC
Confidence             88888877889999999999999999986521               00      023689999999999999999999


Q ss_pred             CCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEec
Q psy1413         291 VSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLI  368 (408)
Q Consensus       291 ~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~  368 (408)
                      +++.+++.++ ...++++++ ....++++++++|+|+|++|++++++|+.+|+++++.+++++++.+.++++|++.+++.
T Consensus       160 is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~  239 (367)
T cd08263         160 LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA  239 (367)
T ss_pred             CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecC
Confidence            9998888777 677788887 34566899999999669999999999999999878888888999999999999999998


Q ss_pred             CCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         369 DRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      +.    .+..+.+++.+.++++|++||++|+...
T Consensus       240 ~~----~~~~~~l~~~~~~~~~d~vld~vg~~~~  269 (367)
T cd08263         240 AK----EDAVAAIREITGGRGVDVVVEALGKPET  269 (367)
T ss_pred             Cc----ccHHHHHHHHhCCCCCCEEEEeCCCHHH
Confidence            76    5566777777777889999999998633

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.81  E-value=1e-18  Score=167.58  Aligned_cols=232  Identities=41%  Similarity=0.714  Sum_probs=184.2

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV  152 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv  152 (408)
                      +.+.+ +..++|...+..+++.+.+.+++..++.+.- |.   .........|.++.|.+..+|+....++.        
T Consensus        10 ~~l~~-~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~-~~---~~~~~~~~~g~~~~G~V~~~g~~v~~~~~--------   76 (343)
T cd08236          10 GDLRY-EDIPKPEPGPGEVLVKVKACGICGSDIPRYL-GT---GAYHPPLVLGHEFSGTVEEVGSGVDDLAV--------   76 (343)
T ss_pred             CceeE-EecCCCCCCCCeEEEEEEEEEECccchHhhc-CC---CCCCCCcccCcceEEEEEEECCCCCcCCC--------
Confidence            34555 5556676677788888888888877665531 11   11123456788999999998864333333        


Q ss_pred             EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                                                                                                      
T Consensus        77 --------------------------------------------------------------------------------   76 (343)
T cd08236          77 --------------------------------------------------------------------------------   76 (343)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhcc
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRA  312 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~  312 (408)
                      +|+|...+...|+.|.+|..+++..|++....+. ...|+|++|+.++++.++++|++++.++++.+....++++++...
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~  155 (343)
T cd08236          77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLA  155 (343)
T ss_pred             CCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHHHHHhc
Confidence            8899887778899999999999999998766654 367999999999999999999999998888777777888888777


Q ss_pred             CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         313 GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       313 ~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .++++++++|+|+|.+|++++|+++.+|++.++++++++++.+.++++|++.++++++    .. .+.++..++++++|+
T Consensus       156 ~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~----~~-~~~~~~~~~~~~~d~  230 (343)
T cd08236         156 GITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE----ED-VEKVRELTEGRGADL  230 (343)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc----cc-HHHHHHHhCCCCCCE
Confidence            7899999999977999999999999999987888888888888889999999998876    34 556667777778999


Q ss_pred             EEEcccchhhh
Q psy1413         393 TIDCSGIESTI  403 (408)
Q Consensus       393 i~d~~g~~~~~  403 (408)
                      +|||+|.....
T Consensus       231 vld~~g~~~~~  241 (343)
T cd08236         231 VIEAAGSPATI  241 (343)
T ss_pred             EEECCCCHHHH
Confidence            99999865443

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.81  E-value=2.3e-19  Score=171.81  Aligned_cols=229  Identities=25%  Similarity=0.380  Sum_probs=158.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      |.++++|++|+.++..........++|.++|||++|+|+++|++|+++++||+|...+.+                    
T Consensus        30 v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (340)
T TIGR00692        30 VLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTK  109 (340)
T ss_pred             EEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcc
Confidence            468899999998864322112233568889999999999999999999999999874321                    


Q ss_pred             -------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCc
Q psy1413          61 -------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE  127 (408)
Q Consensus        61 -------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~  127 (408)
                                   .......++..|+++++ +.+.++.++.+++.... .....+++++|.++|++|.+++++++.+|..
T Consensus       110 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~-~~a~~~~~~~~a~~~~~-~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~  187 (340)
T TIGR00692       110 IFGVDTDGCFAEYAVVPAQNIWKNPKSIPP-EYATIQEPLGNAVHTVL-AGPISGKSVLVTGAGPIGLMAIAVAKASGAY  187 (340)
T ss_pred             eEeecCCCcceeEEEeehHHcEECcCCCCh-HhhhhcchHHHHHHHHH-ccCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence                         12223344445555554 33334333333221111 1112578899988889999998888877753


Q ss_pred             -------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCc
Q psy1413         128 -------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDV  161 (408)
Q Consensus       128 -------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~  161 (408)
                                                                 ++.+++++|..   .+.+++++++|+++.+|......
T Consensus       188 ~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~  267 (340)
T TIGR00692       188 PVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKV  267 (340)
T ss_pred             EEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCc
Confidence                                                       22333333322   15688999999999999765545


Q ss_pred             ccCHH-HHHhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         162 KIPLV-LTMTKEIDIRGVFRY--ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       162 ~~~~~-~~~~~~~~l~g~~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      .+++. .++++++++.+....  .+.+.+++++++++++++.+++++.++++++.++++.+.+++ . +|+++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~-gkvvv~~  340 (340)
T TIGR00692       268 TIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQ-T-GKVILSL  340 (340)
T ss_pred             ccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCC-C-ceEEEeC
Confidence            55555 678889998876532  256788999999999987777999999999999999998764 3 7887753

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.80  E-value=8.7e-19  Score=167.51  Aligned_cols=127  Identities=19%  Similarity=0.243  Sum_probs=104.2

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCC-----CCEEEEEec-chhHHHHHHHHHHh-C
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTL-----GSKVLITGA-GPIGLVTLLTARAL-G  340 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~-----~~~~lv~G~-G~~G~~~~~~~~~~-G  340 (408)
                      .|+|++|..++++.++++|++++.++++..+ ...++++++ ....+++     ++++||+|+ |++|++++|+++.+ |
T Consensus        95 ~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G  174 (336)
T TIGR02817        95 PGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTG  174 (336)
T ss_pred             CCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCC
Confidence            4778899999999999999999998888777 566678776 4566666     899999998 99999999999998 9


Q ss_pred             CCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhh
Q psy1413         341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI  403 (408)
Q Consensus       341 a~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~  403 (408)
                      ++ |+.+++++++.+.++++|+++++++..     +..+.+++. .++++|+++|++++...+
T Consensus       175 ~~-vi~~~~~~~~~~~l~~~g~~~~~~~~~-----~~~~~i~~~-~~~~vd~vl~~~~~~~~~  230 (336)
T TIGR02817       175 LT-VIATASRPESQEWVLELGAHHVIDHSK-----PLKAQLEKL-GLEAVSYVFSLTHTDQHF  230 (336)
T ss_pred             CE-EEEEcCcHHHHHHHHHcCCCEEEECCC-----CHHHHHHHh-cCCCCCEEEEcCCcHHHH
Confidence            87 888888889999999999999998643     355556664 456899999998654443

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.80  E-value=6.6e-19  Score=168.72  Aligned_cols=129  Identities=20%  Similarity=0.215  Sum_probs=102.9

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |+|++|..++++.++++|+++++++++.++ ...++++++. ...+++++++||+|+ |++|+.++|+|+.+|++ ++++
T Consensus        99 g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~  177 (341)
T cd08290          99 GTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINV  177 (341)
T ss_pred             ccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEE
Confidence            346677888888899999999988888766 6677888873 467899999999998 99999999999999998 6666


Q ss_pred             ecCh----hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         348 DILE----HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       348 ~~~~----~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      .+++    ++.+.++++|++++++++.. +..+..+.++..+.+ ++|.+|||+|+...
T Consensus       178 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~i~~~~~~-~~d~vld~~g~~~~  234 (341)
T cd08290         178 VRDRPDLEELKERLKALGADHVLTEEEL-RSLLATELLKSAPGG-RPKLALNCVGGKSA  234 (341)
T ss_pred             EcCCCcchhHHHHHHhcCCCEEEeCccc-ccccHHHHHHHHcCC-CceEEEECcCcHhH
Confidence            5554    56788888999999987651 001566777777766 89999999997654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.80  E-value=4.8e-19  Score=170.08  Aligned_cols=228  Identities=27%  Similarity=0.395  Sum_probs=163.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |.++|+|++|++.+. +.+..  .++|.++|||++|+|+++|++++++++||+|...+.                     
T Consensus        32 v~~~~i~~~d~~~~~-g~~~~--~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (347)
T cd05278          32 VTATSICGSDLHIYR-GGVPG--AKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGL  108 (347)
T ss_pred             EEEEEechhhHHHHc-CCCCC--CCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCC
Confidence            468999999999884 33222  466899999999999999999999999999986321                     


Q ss_pred             ---------------cccccCC--cceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccc
Q psy1413          60 ---------------FRNVCLS--PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDP  121 (408)
Q Consensus        60 ---------------~~~~~~~--~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a  121 (408)
                                     +...+..  .++..|+++++.+.+.++..+.+++... ....+ .+++++|.|+|.+|+++++++
T Consensus       109 ~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqla  187 (347)
T cd05278         109 WGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGA  187 (347)
T ss_pred             cccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence                           1222332  5667777777755666666666666443 22222 478888888888999998888


Q ss_pred             ccccC-c------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEc
Q psy1413         122 MIVGH-E------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVG  155 (408)
Q Consensus       122 ~~~G~-~------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G  155 (408)
                      +.+|. .                                          ++.++++++..   .+.+++|+++|+++.+|
T Consensus       188 k~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  267 (347)
T cd05278         188 RLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVG  267 (347)
T ss_pred             HHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEc
Confidence            87774 1                                          23344444431   25689999999999999


Q ss_pred             cCCCCcccCH-HHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         156 AGSQDVKIPL-VLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       156 ~~~~~~~~~~-~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .......... ...+.+++++.+..... ..+++++++++++++++.+++...|+++++.++++.+..++....|++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         268 VYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             CCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence            6544322212 23346788887765443 67899999999999987667889999999999999998776545577654

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.80  E-value=1.8e-19  Score=175.97  Aligned_cols=228  Identities=17%  Similarity=0.174  Sum_probs=157.6

Q ss_pred             CCeeeecccchhhhhcCCCCCC------C-CCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc-------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDF------R-LSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~------~-~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------   60 (408)
                      |.++|||++|++.+.+.....+      + ..++.++|||++|+|+++|++++.+++||+|++.+..             
T Consensus        49 v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~  128 (393)
T cd08246          49 VMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDP  128 (393)
T ss_pred             EEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccc
Confidence            4689999999998743211000      0 1234689999999999999999999999999876521             


Q ss_pred             ---------------------ccccCCcceeccceeeecccccCCCCCCcceEEEEee--ee-ecCCeEEEEcc-Ccccc
Q psy1413          61 ---------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHC--VG-ICGSDVHYLTH-GQIGD  115 (408)
Q Consensus        61 ---------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~--~~-~~g~~vlv~g~-G~vG~  115 (408)
                                           ...+...++..|+++++.+.+.++.++.+++.+....  .. ..+++++|+|+ |++|+
T Consensus       129 ~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~  208 (393)
T cd08246         129 MFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGS  208 (393)
T ss_pred             ccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHH
Confidence                                 1222234444555555544444444444444221111  12 24789999985 99999


Q ss_pred             ccccccccccCc-----------------------------------------------------------------cee
Q psy1413         116 FRLSDPMIVGHE-----------------------------------------------------------------ASG  130 (408)
Q Consensus       116 ~~i~~a~~~G~~-----------------------------------------------------------------~~~  130 (408)
                      +++++++.+|++                                                                 ++.
T Consensus       209 a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~  288 (393)
T cd08246         209 MAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDI  288 (393)
T ss_pred             HHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeE
Confidence            988888776653                                                                 223


Q ss_pred             EEEccCch--HHHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeee
Q psy1413         131 IVSKVGAK--VKHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHN  206 (408)
Q Consensus       131 vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~  206 (408)
                      +++++|..  .+++++++++|+++.+|.... ...++...+++++.++.+.+..+ +++++++++++++++++  +++++
T Consensus       289 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~~~~~  366 (393)
T cd08246         289 VFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDP--CLSKV  366 (393)
T ss_pred             EEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCcee--eeeEE
Confidence            34444432  257899999999999996543 45567777889999999988776 78999999999998864  48899


Q ss_pred             eccchHHHHHHHHHcCCCCceEEE
Q psy1413         207 YLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       207 ~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                      |+++|+++||+.+.++....+|++
T Consensus       367 ~~l~~~~~a~~~~~~~~~~~gkvv  390 (393)
T cd08246         367 FSLDETPDAHQLMHRNQHHVGNMA  390 (393)
T ss_pred             EeHHHHHHHHHHHHhCccccceEE
Confidence            999999999999987622334444

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.80  E-value=3.4e-19  Score=170.53  Aligned_cols=224  Identities=24%  Similarity=0.293  Sum_probs=158.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      |+++++|++|++.+. +.   .+...|.++|||++|+|+++|++++.|++||+|++.+..                    
T Consensus        32 v~~~~i~~~d~~~~~-g~---~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (338)
T PRK09422         32 MEYCGVCHTDLHVAN-GD---FGDKTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSV  107 (338)
T ss_pred             EEEEeechhHHHHHc-CC---CCCCCCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCc
Confidence            468999999999874 32   222347899999999999999999999999999863211                    


Q ss_pred             --------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccc-
Q psy1413          61 --------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIV-  124 (408)
Q Consensus        61 --------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~-  124 (408)
                                    ...+...++..|+++++.+.+.++....+++... .... ..+++++|.|+|++|++++++++.. 
T Consensus       108 ~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~  186 (338)
T PRK09422        108 KNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVF  186 (338)
T ss_pred             cccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhC
Confidence                          1112234455666666655555555545544221 1112 2478899999999999999999874 


Q ss_pred             cCccee-----------------------------------------EEEccCch---HHHHhhccCCcEEEEEccCCCC
Q psy1413         125 GHEASG-----------------------------------------IVSKVGAK---VKHLKATRPGGCLVIVGAGSQD  160 (408)
Q Consensus       125 G~~~~~-----------------------------------------vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~  160 (408)
                      |+....                                         ++.+.++.   .+++++++++|+++.+|.....
T Consensus       187 g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~  266 (338)
T PRK09422        187 NAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPES  266 (338)
T ss_pred             CCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCC
Confidence            753211                                         11111111   1568889999999999987666


Q ss_pred             cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         161 VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       161 ~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      ..++...+..++.++.+.+... ++++++++++++++++.  .++ .++++++++||+.+.++. ..+|+++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~v~-~~~~~~~~~a~~~~~~~~-~~gkvvv~~  336 (338)
T PRK09422        267 MDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVP--KVQ-LRPLEDINDIFDEMEQGK-IQGRMVIDF  336 (338)
T ss_pred             ceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCc--cEE-EEcHHHHHHHHHHHHcCC-ccceEEEec
Confidence            6677778888999998877554 77899999999998854  354 589999999999998875 456776654

>cd05281 TDH Threonine dehydrogenase

Probab=99.80  E-value=1.1e-18  Score=167.16  Aligned_cols=233  Identities=32%  Similarity=0.540  Sum_probs=177.0

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ ...+.|.+.+..+.+++...+++..++.+.............+...|.++.|++..+|.....++.          
T Consensus        13 ~~~-~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~----------   81 (341)
T cd05281          13 AEL-VEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKV----------   81 (341)
T ss_pred             eEE-EeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCC----------
Confidence            444 445667777788888888888877665542110000011223445788999999998864322222          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    ++
T Consensus        82 ------------------------------------------------------------------------------Gd   83 (341)
T cd05281          82 ------------------------------------------------------------------------------GD   83 (341)
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          78


Q ss_pred             ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCc
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGV  314 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~  314 (408)
                      +|...+..+|+.|..|..+++++|....+.+. ..+|+|++|+.++++.++++|++++.+.++++.++.++++++. ...
T Consensus        84 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~-~~~  161 (341)
T cd05281          84 YVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL-AGD  161 (341)
T ss_pred             EEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-hcC
Confidence            88777777999999999999999977544443 2468999999999999999999999866666667778877664 345


Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      +++++++|+|+|++|+.++|+++.+|++++++++++++|.+.++++|++++++.+.    .+.. .++++++++++|++|
T Consensus       162 ~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~-~~~~~~~~~~vd~vl  236 (341)
T cd05281         162 VSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE----EDVV-EVKSVTDGTGVDVVL  236 (341)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccc----ccHH-HHHHHcCCCCCCEEE
Confidence            78999999877999999999999999976888888889999999999999988765    4556 677777778999999


Q ss_pred             Ecccchhhh
Q psy1413         395 DCSGIESTI  403 (408)
Q Consensus       395 d~~g~~~~~  403 (408)
                      ||+|+....
T Consensus       237 d~~g~~~~~  245 (341)
T cd05281         237 EMSGNPKAI  245 (341)
T ss_pred             ECCCCHHHH
Confidence            999875443

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.80  E-value=2.2e-18  Score=165.09  Aligned_cols=228  Identities=31%  Similarity=0.521  Sum_probs=171.5

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEE-ccCc-c----cc--ccccccccccCcceeEEEccCchHHH-Hhh
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYL-THGQ-I----GD--FRLSDPMIVGHEASGIVSKVGAKVKH-LKA  144 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~-g~G~-v----G~--~~i~~a~~~G~~~~~vv~~~g~~~~~-~~~  144 (408)
                      .+.+ +..+.|.+.+..+++.+.+.+++..++.+. |... +    +.  .........|.++.|++..+|...+. ++.
T Consensus        10 ~~~~-~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~   88 (341)
T cd08262          10 PLVV-RDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKV   88 (341)
T ss_pred             ceEE-EecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCC
Confidence            4555 556778888888899999999987776553 2100 0    00  01112345788999999999864332 333


Q ss_pred             ccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         145 TRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       145 l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                                                                                                      
T Consensus        89 --------------------------------------------------------------------------------   88 (341)
T cd08262          89 --------------------------------------------------------------------------------   88 (341)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhh
Q psy1413         225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSV  304 (408)
Q Consensus       225 ~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~  304 (408)
                              +|+|+..+...|+.|..|..|.           .+...|+|++|+.++++.++++|++++.+++++..++.+
T Consensus        89 --------Gd~V~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~~  149 (341)
T cd08262          89 --------GTRVTSLPLLLCGQGASCGIGL-----------SPEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAV  149 (341)
T ss_pred             --------CCEEEecCCcCCCCChhhhCCC-----------CcCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHHH
Confidence                    8999988888999999995322           123569999999999999999999999888775557778


Q ss_pred             hhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413         305 GVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       305 ~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      +++++....++++++++|+|+|++|++++|+++.+|++.++++++++++.+.++++|++.+++++.....++.. .+.+.
T Consensus       150 a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~~  228 (341)
T cd08262         150 GLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELAR  228 (341)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHHH
Confidence            88887778899999999997799999999999999999788888889999999999999999876521112333 34455


Q ss_pred             hcCCCCceEEEcccchhh
Q psy1413         385 LQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       385 ~~~~~~d~i~d~~g~~~~  402 (408)
                      +.++++|++||++|+...
T Consensus       229 ~~~~~~d~vid~~g~~~~  246 (341)
T cd08262         229 AGGPKPAVIFECVGAPGL  246 (341)
T ss_pred             hCCCCCCEEEECCCCHHH
Confidence            566789999999987433

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.80  E-value=1.1e-18  Score=167.81  Aligned_cols=166  Identities=27%  Similarity=0.365  Sum_probs=140.1

Q ss_pred             cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      +++|+..|...|+.|..|.+++++.|....+.+.. ..|+|++|+.++++.++++|+++++.+++.+. ...++++++..
T Consensus        91 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~  169 (350)
T cd08240          91 GDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIF-QDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKK  169 (350)
T ss_pred             CCEEEECCcCCCCCChHHHCcCcccCCCCCceeee-ccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHh
Confidence            89999888899999999999999999887666543 57999999999999999999999998888766 66778888744


Q ss_pred             c-CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         312 A-GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       312 ~-~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      . .++++++++|+|+|++|++++|+++.+|+++|+++++++++.+.++++|++.+++.++    .+..+.+.+...+ ++
T Consensus       170 ~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~-~~  244 (350)
T cd08240         170 LMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSD----PDAAKRIIKAAGG-GV  244 (350)
T ss_pred             cccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCC----ccHHHHHHHHhCC-CC
Confidence            3 4458899999977999999999999999988999989999999999999998888765    4455666666655 89


Q ss_pred             ceEEEcccchhhhh
Q psy1413         391 DKTIDCSGIESTIK  404 (408)
Q Consensus       391 d~i~d~~g~~~~~~  404 (408)
                      |++||++|.....+
T Consensus       245 d~vid~~g~~~~~~  258 (350)
T cd08240         245 DAVIDFVNNSATAS  258 (350)
T ss_pred             cEEEECCCCHHHHH
Confidence            99999998654443

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.80  E-value=1.8e-18  Score=165.64  Aligned_cols=235  Identities=29%  Similarity=0.472  Sum_probs=184.2

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ +..++|.+.+..+++.+...+++..++.+. .|..+. ........|.++.|.+..+|+....++.         
T Consensus        13 ~~~~-~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~-~g~~~~-~~~~~~~~g~e~~G~V~~vG~~~~~~~~---------   80 (341)
T cd08297          13 PYEV-KDVPVPEPGPGEVLVKLEASGVCHTDLHAA-LGDWPV-KPKLPLIGGHEGAGVVVAVGPGVSGLKV---------   80 (341)
T ss_pred             CceE-EEeeCCCCCCCeEEEEEEEeecchhHHHHH-cCCCCc-CCCCCccCCcccceEEEEeCCCCCCCCC---------
Confidence            5555 455667777788888888888877665443 122111 0123345688999999998865332333         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        81 -------------------------------------------------------------------------------G   81 (341)
T cd08297          81 -------------------------------------------------------------------------------G   81 (341)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           7


Q ss_pred             CceeecC-CCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         234 DRVAIEP-GVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       234 ~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      ++|...| ..+|+.|++|..++++.|......+. ...|+|++|+.++++.++++|+++++.+++.++ ...++++++..
T Consensus        82 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~  160 (341)
T cd08297          82 DRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK  160 (341)
T ss_pred             CEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh
Confidence            8887665 36799999999999999988876665 246899999999999999999999988877665 66778888866


Q ss_pred             cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         312 AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       312 ~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      ..+++++++||+|+ +++|++++++++++|++ ++.+++++++.+.++++|++.++++++    .+..+.+.+.++++++
T Consensus       161 ~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~----~~~~~~~~~~~~~~~v  235 (341)
T cd08297         161 AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLR-VIAIDVGDEKLELAKELGADAFVDFKK----SDDVEAVKELTGGGGA  235 (341)
T ss_pred             cCCCCCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHcCCcEEEcCCC----ccHHHHHHHHhcCCCC
Confidence            68899999999998 78999999999999996 888889999999999999999999876    5677778888878899


Q ss_pred             ceEEEcccchhhhhh
Q psy1413         391 DKTIDCSGIESTIKL  405 (408)
Q Consensus       391 d~i~d~~g~~~~~~~  405 (408)
                      |++||+.++....+.
T Consensus       236 d~vl~~~~~~~~~~~  250 (341)
T cd08297         236 HAVVVTAVSAAAYEQ  250 (341)
T ss_pred             CEEEEcCCchHHHHH
Confidence            999998876555443

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.79  E-value=4.6e-19  Score=172.51  Aligned_cols=227  Identities=25%  Similarity=0.313  Sum_probs=153.7

Q ss_pred             CCeeeecccchhhhhcCCCC----CCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc--------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIG----DFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN--------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~----~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~--------------   62 (408)
                      |+++|+|++|++.+..+..+    +...++|.++|||++|+|+++|++++.|++||||++.+...|              
T Consensus        58 v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~  137 (384)
T cd08265          58 VKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHC  137 (384)
T ss_pred             EEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccC
Confidence            46899999999987522101    112356889999999999999999999999999986442211              


Q ss_pred             -------------------ccCCcceecccee-------eecccccCCCCCCcceEEEEee-eee-cCCeEEEEccCccc
Q psy1413          63 -------------------VCLSPILRRRFSL-------RFREQKPIEDPDDHEVLLEMHC-VGI-CGSDVHYLTHGQIG  114 (408)
Q Consensus        63 -------------------~~~~~~~~~p~~~-------~~~~~~~lp~~~~~~~~~~~~~-~~~-~g~~vlv~g~G~vG  114 (408)
                                         .....++..|+++       .+ +.+.++.++.+++.+.... ..+ .+++++|.|+|++|
T Consensus       138 ~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~-~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG  216 (384)
T cd08265         138 KNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAF-EAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIG  216 (384)
T ss_pred             CCcceeeecCCCcceeeEEechHHeEECCccccccccCCCH-HHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHH
Confidence                               1122223333321       11 1222222222222111001 122 47889999999999


Q ss_pred             cccccccccccCc----------------------------------------------ceeEEEccCch----HHHHhh
Q psy1413         115 DFRLSDPMIVGHE----------------------------------------------ASGIVSKVGAK----VKHLKA  144 (408)
Q Consensus       115 ~~~i~~a~~~G~~----------------------------------------------~~~vv~~~g~~----~~~~~~  144 (408)
                      ++++++++.+|+.                                              ++.++++.|..    .+.+++
T Consensus       217 ~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~  296 (384)
T cd08265         217 LAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKS  296 (384)
T ss_pred             HHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHH
Confidence            9998888877751                                              22334444421    256789


Q ss_pred             ccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcC
Q psy1413         145 TRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY--ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTG  222 (408)
Q Consensus       145 l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~  222 (408)
                      |+++|+++.+|......+++...+.++..++.+.+..  ...+++++++++++++++.+++++.|+++++.+||+.+.++
T Consensus       297 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~  376 (384)
T cd08265         297 IAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER  376 (384)
T ss_pred             HHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC
Confidence            9999999999976555556666778888899988753  35799999999999998877899999999999999997654


Q ss_pred             CCCceEEE
Q psy1413         223 AGNAIKVM  230 (408)
Q Consensus       223 ~~~~~kvv  230 (408)
                        ..+|++
T Consensus       377 --~~~kvv  382 (384)
T cd08265         377 --TDGKIT  382 (384)
T ss_pred             --CCceEE
Confidence              345554

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.79  E-value=2.8e-18  Score=164.64  Aligned_cols=232  Identities=31%  Similarity=0.530  Sum_probs=178.3

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ ...+.|.+.+..+.+++.+.+++..++.+. .|....  .......|.++.|++..+|+....++.          
T Consensus        13 ~~~-~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~-~g~~~~--~~~~~~~g~e~~G~V~~~G~~~~~~~~----------   78 (345)
T cd08260          13 LEI-REVPDPEPPPDGVVVEVEACGVCRSDWHGW-QGHDPD--VTLPHVPGHEFAGVVVEVGEDVSRWRV----------   78 (345)
T ss_pred             cEE-EEccCCCCCCCeEEEEEEEeeccHHHHHHh-cCCCCC--CCCCeeeccceeEEEEEECCCCccCCC----------
Confidence            444 334556666777888888888877665443 121111  223456788999999988864332333          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    ++
T Consensus        79 ------------------------------------------------------------------------------Gd   80 (345)
T cd08260          79 ------------------------------------------------------------------------------GD   80 (345)
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          78


Q ss_pred             ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccc--eeeeCCCCCCcccccccc-hhhhhhhhh-h
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALLE-PLSVGVHAC-R  310 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~  310 (408)
                      +|+..+..+|++|..|..|..++|.++.+.+.. .+|+|++|+.+++.  .++++|++++.++++.++ ...++++++ .
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~  159 (345)
T cd08260          81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFT-HPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVH  159 (345)
T ss_pred             EEEECCCCCCCCCccccCcCcccCCCCcccccC-CCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHH
Confidence            887756668999999999999999997655543 37999999999974  899999999988888776 677888887 5


Q ss_pred             ccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         311 RAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       311 ~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      ...++++++++|+|+|++|++++|+++.+|++ |+++.+++++.+.++++|++.+++.+.   ..+..+.+..++.+ ++
T Consensus       160 ~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~-~~  234 (345)
T cd08260         160 QARVKPGEWVAVHGCGGVGLSAVMIASALGAR-VIAVDIDDDKLELARELGAVATVNASE---VEDVAAAVRDLTGG-GA  234 (345)
T ss_pred             ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHhCCCEEEcccc---chhHHHHHHHHhCC-CC
Confidence            67788999999999999999999999999997 888888999999999999999998753   23556667777666 89


Q ss_pred             ceEEEcccchhhhh
Q psy1413         391 DKTIDCSGIESTIK  404 (408)
Q Consensus       391 d~i~d~~g~~~~~~  404 (408)
                      |.+|||+|+...+.
T Consensus       235 d~vi~~~g~~~~~~  248 (345)
T cd08260         235 HVSVDALGIPETCR  248 (345)
T ss_pred             CEEEEcCCCHHHHH
Confidence            99999998654443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.79  E-value=7.1e-19  Score=169.97  Aligned_cols=220  Identities=24%  Similarity=0.386  Sum_probs=157.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |.+++||++|++.+. +.   ++..+|.++|||++|+|+++|+++..+++||+|+..+.                     
T Consensus        32 v~~~~i~~~d~~~~~-g~---~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (363)
T cd08279          32 IAAAGLCHSDLHVVT-GD---LPAPLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGA  107 (363)
T ss_pred             EEEeecCcHHHHHhc-CC---CCCCCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccc
Confidence            468999999999874 33   33467889999999999999999999999999987431                     


Q ss_pred             --------------------------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEE
Q psy1413          60 --------------------------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVH  106 (408)
Q Consensus        60 --------------------------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vl  106 (408)
                                                      +...+...++..|+++++++.+.++....+++........+ .+++++
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vL  187 (363)
T cd08279         108 GILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVA  187 (363)
T ss_pred             cccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEE
Confidence                                            12233345555666666544444443333333111111222 478899


Q ss_pred             EEccCccccccccccccccCc-------------------------------------------ceeEEEccCch---HH
Q psy1413         107 YLTHGQIGDFRLSDPMIVGHE-------------------------------------------ASGIVSKVGAK---VK  140 (408)
Q Consensus       107 v~g~G~vG~~~i~~a~~~G~~-------------------------------------------~~~vv~~~g~~---~~  140 (408)
                      |+|+|.+|++++++++.+|+.                                           ++.++++++..   .+
T Consensus       188 I~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~  267 (363)
T cd08279         188 VIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQ  267 (363)
T ss_pred             EECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHH
Confidence            999899999988888877753                                           22333444421   25


Q ss_pred             HHhhccCCcEEEEEccCC--CCcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccchHHH
Q psy1413         141 HLKATRPGGCLVIVGAGS--QDVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLEDTLH  214 (408)
Q Consensus       141 ~~~~l~~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~  214 (408)
                      .+++++++|+++.+|...  ....++...+..++.++.+.+..    .+.+++++++++++++++.++++++|+++|+.+
T Consensus       268 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~  347 (363)
T cd08279         268 ALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINE  347 (363)
T ss_pred             HHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHH
Confidence            689999999999999765  35566777777788888876532    267899999999999988778899999999999


Q ss_pred             HHHHHHcCCC
Q psy1413         215 AFETAKTGAG  224 (408)
Q Consensus       215 a~~~~~~~~~  224 (408)
                      |++.+.+++.
T Consensus       348 a~~~~~~~~~  357 (363)
T cd08279         348 AFADMLAGEN  357 (363)
T ss_pred             HHHHHhcCCc
Confidence            9999987653

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.79  E-value=2.9e-18  Score=162.88  Aligned_cols=126  Identities=21%  Similarity=0.250  Sum_probs=104.8

Q ss_pred             cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      +|++|..++.+.++++|++++.++++.++ ...++++++ ....+.++++++|+|+ |++|+.++|+|+.+|++ ++++.
T Consensus        92 ~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~-v~~~~  170 (323)
T cd05282          92 TWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFK-TINVV  170 (323)
T ss_pred             cceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEe
Confidence            35667777778899999999987777655 556677776 3356789999999998 99999999999999998 77788


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      +++++.+.++++|++.++++++    .+..+.+.+.+.++++|.+|||+|+...
T Consensus       171 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vl~~~g~~~~  220 (323)
T cd05282         171 RRDEQVEELKALGADEVIDSSP----EDLAQRVKEATGGAGARLALDAVGGESA  220 (323)
T ss_pred             cChHHHHHHHhcCCCEEecccc----hhHHHHHHHHhcCCCceEEEECCCCHHH
Confidence            8888899999999999998876    5677778888888899999999997654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.79  E-value=8.6e-19  Score=167.69  Aligned_cols=226  Identities=31%  Similarity=0.423  Sum_probs=164.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP----------------------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~----------------------   58 (408)
                      |+++++|++|+..+. +..+.  ..+|.++|+|++|+|+++|++++++++||+|+..+                      
T Consensus        31 v~~~~l~~~d~~~~~-~~~~~--~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (337)
T cd08261          31 VKRVGICGSDLHIYH-GRNPF--ASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQ  107 (337)
T ss_pred             EEEEeEcccChHHHc-CCCCc--CCCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCC
Confidence            468999999999874 32221  24578899999999999999999999999998631                      


Q ss_pred             -----------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC
Q psy1413          59 -----------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        59 -----------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                                 .+...... ++..|+++++++.+.+ ....++.... ....+ .+++++|+|+|.+|.+++++++.+|.
T Consensus       108 ~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~  184 (337)
T cd08261         108 VLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA  184 (337)
T ss_pred             eeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                       22344445 6677777777444333 2222222111 11122 47789999988999999988887765


Q ss_pred             c------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCc
Q psy1413         127 E------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDV  161 (408)
Q Consensus       127 ~------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~  161 (408)
                      .                                          ++.+++++|..   .+.+++++++|+++.+|....+.
T Consensus       185 ~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~  264 (337)
T cd08261         185 RVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPV  264 (337)
T ss_pred             eEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCC
Confidence            2                                          34445555432   25788999999999999776666


Q ss_pred             ccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         162 KIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       162 ~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .++...+..+++++.+..... +.+++++++++++++++.+.+.+.++++++.++++.+.+++....|++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~  336 (337)
T cd08261         265 TFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIE  336 (337)
T ss_pred             ccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEe
Confidence            667777788899988875444 57899999999999987555889999999999999998776666777765

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.79  E-value=1.1e-18  Score=164.57  Aligned_cols=212  Identities=20%  Similarity=0.254  Sum_probs=155.0

Q ss_pred             cceeccceeeecccccCCCCCCcceEEEEeeeeec-CCeEEEEccCcccccc-ccccccccCcceeEEEccCchHHHHhh
Q psy1413          67 PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGIC-GSDVHYLTHGQIGDFR-LSDPMIVGHEASGIVSKVGAKVKHLKA  144 (408)
Q Consensus        67 ~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~-g~~vlv~g~G~vG~~~-i~~a~~~G~~~~~vv~~~g~~~~~~~~  144 (408)
                      .++..|+.+.+ +..++|.+.+.++++.+.+++++ ++++.+.. |...... ..++..+|+|+.|+|+.+|+.. .++.
T Consensus         5 ~~~~~~~~l~~-~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~-G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~v   81 (308)
T TIGR01202         5 IVLSGPNQIEL-REVTLTPPSPGDLVVEIWYSGISTGTEKLFWN-GLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRP   81 (308)
T ss_pred             EEEeCCCeEEE-EEecCCCCCCCeEEEEEEEEeeccCchhHHhc-CCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCC
Confidence            44566777888 67888888899999999999995 77766542 2111111 2457788999999999999753 2333


Q ss_pred             ccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         145 TRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       145 l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                                                                                                      
T Consensus        82 --------------------------------------------------------------------------------   81 (308)
T TIGR01202        82 --------------------------------------------------------------------------------   81 (308)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhh
Q psy1413         225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSV  304 (408)
Q Consensus       225 ~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~  304 (408)
                              +|+|...    +..|..|.               ....|+|++|+.++++.++++|++++.+. +.+++..+
T Consensus        82 --------GdrV~~~----~~~c~~~~---------------~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~  133 (308)
T TIGR01202        82 --------GDRVFVP----GSNCYEDV---------------RGLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAAT  133 (308)
T ss_pred             --------CCEEEEe----Cccccccc---------------cccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHH
Confidence                    7888752    12232221               11369999999999999999999998754 55666788


Q ss_pred             hhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413         305 GVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       305 ~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      +++++.+. ..++++++|+|+|++|++++|+++.+|++.|+++++++++++.++++   .++|+.+    .         
T Consensus       134 a~~~~~~~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~----~---------  196 (308)
T TIGR01202       134 ARHAVAGA-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK----D---------  196 (308)
T ss_pred             HHHHHHhc-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh----c---------
Confidence            89888654 34578899998899999999999999999888888877777766543   4555422    1         


Q ss_pred             hcCCCCceEEEcccchhhhhhcC
Q psy1413         385 LQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       385 ~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                       .++++|++|||+|+..+++.++
T Consensus       197 -~~~g~Dvvid~~G~~~~~~~~~  218 (308)
T TIGR01202       197 -PRRDYRAIYDASGDPSLIDTLV  218 (308)
T ss_pred             -cCCCCCEEEECCCCHHHHHHHH
Confidence             2468999999999987766654

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.78  E-value=1.1e-18  Score=164.92  Aligned_cols=228  Identities=24%  Similarity=0.270  Sum_probs=164.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----CcccccCCcceecccee
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----EFRNVCLSPILRRRFSL   75 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----~~~~~~~~~~~~~p~~~   75 (408)
                      +.++++|++|++.++.+........+|.++|||++|+|+++|++++.+++||+|+..+     ++...+.+.++..|+++
T Consensus        26 v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~lP~~~  105 (312)
T cd08269          26 VEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLSGGAFAEYDLADADHAVPLPSLL  105 (312)
T ss_pred             EEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEecCCcceeeEEEchhheEECCCch
Confidence            4589999999987622221111223588999999999999999999999999999754     44566667788888877


Q ss_pred             eecccccCC-CCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCc---------------------------
Q psy1413          76 RFREQKPIE-DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE---------------------------  127 (408)
Q Consensus        76 ~~~~~~~lp-~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~---------------------------  127 (408)
                       . . ..++ .++.+++.+....--..+++++|+|+|.+|.+++++++.+|++                           
T Consensus       106 -~-~-~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~  182 (312)
T cd08269         106 -D-G-QAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDD  182 (312)
T ss_pred             -h-h-hHHhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCC
Confidence             2 2 1222 2322222111111112478899999889999998888877764                           


Q ss_pred             ----------------ceeEEEccCch---HHHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecCC-----
Q psy1413         128 ----------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRYA-----  182 (408)
Q Consensus       128 ----------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~~-----  182 (408)
                                      ++.++++.|..   ...+++++++|+++.+|... .+..+++..+.++++++.+.....     
T Consensus       183 ~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (312)
T cd08269         183 SEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGL  262 (312)
T ss_pred             CcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchh
Confidence                            33344444432   25689999999999999654 345666667889999988765332     


Q ss_pred             CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         183 NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       183 ~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      +.+++++++++++++++.+++++.|++++++++++.+.+++...+|+++
T Consensus       263 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         263 EGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             hHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            4689999999999998766788999999999999999999877788876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.78  E-value=2e-18  Score=164.26  Aligned_cols=220  Identities=29%  Similarity=0.401  Sum_probs=168.7

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ +..+.+.+.+..+++++...++++.++.+.- +   ...-.....+|.++.|.+..+|+..+.++.         
T Consensus        13 ~~~~-~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~-~---~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~---------   78 (325)
T cd08264          13 NLKV-EDVKDPKPGPGEVLIRVKMAGVNPVDYNVIN-A---VKVKPMPHIPGAEFAGVVEEVGDHVKGVKK---------   78 (325)
T ss_pred             ceEE-EeccCCCCCCCeEEEEEEEEEechHHHHHHh-C---CCCCCCCeecccceeEEEEEECCCCCCCCC---------
Confidence            4444 3334455666778888888888776654421 1   111112446789999999999975433333         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        79 -------------------------------------------------------------------------------G   79 (325)
T cd08264          79 -------------------------------------------------------------------------------G   79 (325)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhcc
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRA  312 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~  312 (408)
                      |+|...+..+|++|.+|..|++++|++..+.+.. ..|+|++|..++++.++++|+++++++++.++ ...++++++...
T Consensus        80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~  158 (325)
T cd08264          80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVV-SNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTA  158 (325)
T ss_pred             CEEEECCCcCCCCChhhcCCCccccCccceeecc-CCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHhc
Confidence            8988888889999999999999999986655542 46899999999999999999999988888776 557788888668


Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      .++++++++|+|+ |++|++++++|+.+|++ ++++++    .+.++++|++++++.++      ..+.+++++  +++|
T Consensus       159 ~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~~----~~~~~~~g~~~~~~~~~------~~~~l~~~~--~~~d  225 (325)
T cd08264         159 GLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVSR----KDWLKEFGADEVVDYDE------VEEKVKEIT--KMAD  225 (325)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEeH----HHHHHHhCCCeeecchH------HHHHHHHHh--CCCC
Confidence            8999999999999 99999999999999997 666653    36667899999987643      245566666  5899


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +++|++|+.
T Consensus       226 ~vl~~~g~~  234 (325)
T cd08264         226 VVINSLGSS  234 (325)
T ss_pred             EEEECCCHH
Confidence            999999964

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>KOG1198|consensus

Probab=99.78  E-value=3e-18  Score=161.98  Aligned_cols=127  Identities=29%  Similarity=0.430  Sum_probs=115.7

Q ss_pred             CCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hcc------CcCCCCEEEEEec-chhHHHHHHHHHH
Q psy1413         268 PDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRA------GVTLGSKVLITGA-GPIGLVTLLTARA  338 (408)
Q Consensus       268 ~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~------~~~~~~~~lv~G~-G~~G~~~~~~~~~  338 (408)
                      ...|+|++|.++++..++++|+++++.++|.++ .+.|+|.++ ...      .++++.++||+|+ |++|++++|+|+.
T Consensus       101 ~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~  180 (347)
T KOG1198|consen  101 LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKH  180 (347)
T ss_pred             cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHh
Confidence            357999999999999999999999999999888 677788888 445      6999999999998 9999999999999


Q ss_pred             hCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         339 LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       339 ~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +|+. .+++.+++++++.++++|||+++|+++    ++..++++..+ +++||+||||+|+.
T Consensus       181 ~~~~-~v~t~~s~e~~~l~k~lGAd~vvdy~~----~~~~e~~kk~~-~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  181 AGAI-KVVTACSKEKLELVKKLGADEVVDYKD----ENVVELIKKYT-GKGVDVVLDCVGGS  236 (347)
T ss_pred             cCCc-EEEEEcccchHHHHHHcCCcEeecCCC----HHHHHHHHhhc-CCCccEEEECCCCC
Confidence            9976 555668999999999999999999998    99999999999 88999999999985

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.78  E-value=3.1e-18  Score=163.85  Aligned_cols=229  Identities=26%  Similarity=0.346  Sum_probs=176.0

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ ...++|.+.+.++++.+.++++++.++.+.- |..  .........|.++.|.+..+|.....++.         
T Consensus        11 ~~~~-~~~~~p~~~~~evlirv~a~~i~~~d~~~~~-g~~--~~~~~p~~~g~e~~G~V~~vG~~v~~~~~---------   77 (337)
T cd05283          11 KLEP-FTFERRPLGPDDVDIKITYCGVCHSDLHTLR-NEW--GPTKYPLVPGHEIVGIVVAVGSKVTKFKV---------   77 (337)
T ss_pred             CceE-EeccCCCCCCCeEEEEEEEecccchHHHHhc-CCc--CCCCCCcccCcceeeEEEEECCCCcccCC---------
Confidence            4445 5667888888899999999999877665532 111  11233556789999999999865443443         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        78 -------------------------------------------------------------------------------G   78 (337)
T cd05283          78 -------------------------------------------------------------------------------G   78 (337)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecC-CCcccccccccCCccccccceeecc------cCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhh
Q psy1413         234 DRVAIEP-GVPCRTCTYCKEGRYNLCRQIFFCA------TPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVG  305 (408)
Q Consensus       234 ~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~  305 (408)
                      ++|.+.+ ..+|++|..|..+..++|.+..+..      .....|+|++|+.++++.++++|++++.++++.+. ...++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta  158 (337)
T cd05283          79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITV  158 (337)
T ss_pred             CEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHH
Confidence            8886444 3589999999999999998865542      12346999999999999999999999998888766 55677


Q ss_pred             hhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHh
Q psy1413         306 VHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       306 ~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~  385 (408)
                      ++++....++++++++|.|+|++|++++|+++.+|++ ++.+++++++.+.++++|++.+++.+.    .+..+   .. 
T Consensus       159 ~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~vi~~~~----~~~~~---~~-  229 (337)
T cd05283         159 YSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGAE-VTAFSRSPSKKEDALKLGADEFIATKD----PEAMK---KA-  229 (337)
T ss_pred             HHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEecCcc----hhhhh---hc-
Confidence            8787666789999999977799999999999999995 888889999999999999999988755    22211   11 


Q ss_pred             cCCCCceEEEcccchhhhh
Q psy1413         386 QGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       386 ~~~~~d~i~d~~g~~~~~~  404 (408)
                       ++++|.+|||+|......
T Consensus       230 -~~~~d~v~~~~g~~~~~~  247 (337)
T cd05283         230 -AGSLDLIIDTVSASHDLD  247 (337)
T ss_pred             -cCCceEEEECCCCcchHH
Confidence             468999999999764333

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.77  E-value=6.4e-18  Score=161.79  Aligned_cols=128  Identities=26%  Similarity=0.392  Sum_probs=105.5

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccC----------cCCCCEEEEEec-chhHHHHHHHH
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAG----------VTLGSKVLITGA-GPIGLVTLLTA  336 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~----------~~~~~~~lv~G~-G~~G~~~~~~~  336 (408)
                      +|+|++|..++.+.++++|++++.++++.++ +..++++++. ...          .+++++++|+|+ |++|+.+++++
T Consensus        96 ~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a  175 (339)
T cd08249          96 NGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLA  175 (339)
T ss_pred             CCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHH
Confidence            5778999999999999999999988888777 6778888873 333          378999999998 99999999999


Q ss_pred             HHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413         337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       337 ~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~  404 (408)
                      +.+|++ ++.+. ++++.+.++++|++.+++.++    .+..+.+++.+. +++|++||++|+...+.
T Consensus       176 ~~~G~~-v~~~~-~~~~~~~~~~~g~~~v~~~~~----~~~~~~l~~~~~-~~~d~vl~~~g~~~~~~  236 (339)
T cd08249         176 KLAGYK-VITTA-SPKNFDLVKSLGADAVFDYHD----PDVVEDIRAATG-GKLRYALDCISTPESAQ  236 (339)
T ss_pred             HHcCCe-EEEEE-CcccHHHHHhcCCCEEEECCC----chHHHHHHHhcC-CCeeEEEEeeccchHHH
Confidence            999997 66665 568888889999999999876    566667777764 68999999999744433

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.77  E-value=1.7e-18  Score=165.96  Aligned_cols=225  Identities=31%  Similarity=0.475  Sum_probs=160.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |+++++|++|+..+. +..+  +..+|.++|||++|+|+++|++++.+++||+|+..+.                     
T Consensus        31 v~~~~l~~~d~~~~~-g~~~--~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (343)
T cd08235          31 VRACGICGTDVKKIR-GGHT--DLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYK  107 (343)
T ss_pred             EEEeeeccccHHHHc-CCCc--cCCCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcc
Confidence            468999999999874 3222  2345789999999999999999999999999997531                     


Q ss_pred             ------------cccccCCc-----ceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccc
Q psy1413          60 ------------FRNVCLSP-----ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPM  122 (408)
Q Consensus        60 ------------~~~~~~~~-----~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~  122 (408)
                                  +...+...     ++..|+++++.+++ ...+..+++.+.....-..+++++|+|+|.+|++++++++
T Consensus       108 ~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa-~~~~~~~a~~~l~~~~~~~g~~VlV~g~g~vg~~~~~la~  186 (343)
T cd08235         108 KFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAA-LVEPLACCINAQRKAGIKPGDTVLVIGAGPIGLLHAMLAK  186 (343)
T ss_pred             eeccCCCCcceeeEEecccccccccEEECCCCCCHHHHH-hhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence                        12233333     56666666663332 2223222221111111124788999998899999888887


Q ss_pred             cccCc-------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEcc
Q psy1413         123 IVGHE-------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGA  156 (408)
Q Consensus       123 ~~G~~-------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~  156 (408)
                      .+|..                                           ++.++++++..   ...+++++++|+++.+|.
T Consensus       187 ~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~  266 (343)
T cd08235         187 ASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGG  266 (343)
T ss_pred             HcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEec
Confidence            76653                                           34445555432   256899999999999996


Q ss_pred             CCC--CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         157 GSQ--DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       157 ~~~--~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      ...  ...++...+.++++++.+.+... +.+++++++++++++++.+.+.+.|+++++.++++.+.+++  ..|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~--~~k~vi  342 (343)
T cd08235         267 LPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK--SLKIVI  342 (343)
T ss_pred             cCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC--cEEEEe
Confidence            543  35566677888999998877665 77899999999999987666888999999999999999876  567765

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=99.77  E-value=1.2e-18  Score=166.67  Aligned_cols=227  Identities=15%  Similarity=0.066  Sum_probs=159.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCc--cEEEEEeCCCCCCCCCCCEEEEc---cCcccccC-Ccceecc-c
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA--SGIVSKVGAKVKHLKVDNQTRFV---PEFRNVCL-SPILRRR-F   73 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~--~G~Vv~vG~~v~~~~vGdrV~~~---~~~~~~~~-~~~~~~p-~   73 (408)
                      |+++|||+.|++.+. |+.+ ....+|.++|+++  .|.+..+|++++.|++||||+..   .+|...+. ..++..| +
T Consensus        44 v~~~~inp~d~~~~~-g~~~-~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~~~~lp~~  121 (338)
T cd08295          44 NLYLSCDPYMRGRMK-GHDD-SLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDHT  121 (338)
T ss_pred             EEEEeeCHHHHHhhc-cCCc-cccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEecCCceeEEEecchhceeecCCC
Confidence            579999999999874 4311 1235688899864  56666688999999999999853   45556666 5677774 5


Q ss_pred             eeeec-ccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccCcc----------------------
Q psy1413          74 SLRFR-EQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGHEA----------------------  128 (408)
Q Consensus        74 ~~~~~-~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~~~----------------------  128 (408)
                      .+++. +.+.++.+..+++.+......+ .|++++|.|+ |++|++++|+++.+|+..                      
T Consensus       122 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v  201 (338)
T cd08295         122 DVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA  201 (338)
T ss_pred             CCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee
Confidence            66664 5666776666665432222223 4789999985 999999999988777631                      


Q ss_pred             ---------------------eeEEEccCchH--HHHhhccCCcEEEEEccCCCC-c-----ccCHHHHHhcCcEEEEee
Q psy1413         129 ---------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-V-----KIPLVLTMTKEIDIRGVF  179 (408)
Q Consensus       129 ---------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~-----~~~~~~~~~~~~~l~g~~  179 (408)
                                           +.+++++|...  +++++++++|+++.+|..... .     .++...++++++++.+.+
T Consensus       202 i~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~  281 (338)
T cd08295         202 FNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFL  281 (338)
T ss_pred             EEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEE
Confidence                                 22233333211  568999999999999965431 1     234567788999998865


Q ss_pred             cCC------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         180 RYA------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       180 ~~~------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      ...      ..++++++++++|++++.  +.+.|+|+++.+|++.+.+++. .+|++++
T Consensus       282 ~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~-~GkvVl~  337 (338)
T cd08295         282 VGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSN-IGKQVVK  337 (338)
T ss_pred             ehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCC-CceEEEE
Confidence            432      236888999999998764  5566999999999999988754 5677664

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.77  E-value=3.3e-18  Score=163.39  Aligned_cols=226  Identities=21%  Similarity=0.282  Sum_probs=155.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      +.+++||++|++.+ .|.+.  ..++|.++|||++|+|+++|++++.+++||+|++.+..                    
T Consensus        32 v~~~~i~~~d~~~~-~g~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (334)
T PRK13771         32 VNYAGLCYRDLLQL-QGFYP--RMKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRL  108 (334)
T ss_pred             EEEEeechhhHHHh-cCCCC--CCCCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCcccc
Confidence            46899999999877 44322  23568899999999999999999899999999876421                    


Q ss_pred             -------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEcc-CccccccccccccccC
Q psy1413          61 -------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTH-GQIGDFRLSDPMIVGH  126 (408)
Q Consensus        61 -------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~-G~vG~~~i~~a~~~G~  126 (408)
                                   ...+...++..|+++.+.+.+.++....+++.......-..+++++|.|+ |.+|++++++++.+|+
T Consensus       109 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~  188 (334)
T PRK13771        109 GYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGA  188 (334)
T ss_pred             ccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCC
Confidence                         12222334444555544333333333333321111111124788999985 8999999998888776


Q ss_pred             cc------------------------------------eeEEEccCchH--HHHhhccCCcEEEEEccCCCCc--ccCHH
Q psy1413         127 EA------------------------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDV--KIPLV  166 (408)
Q Consensus       127 ~~------------------------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~--~~~~~  166 (408)
                      ..                                    +.+++++|...  +.+++++++|+++.+|......  .++..
T Consensus       189 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  268 (334)
T PRK13771        189 KVIAVTSSESKAKIVSKYADYVIVGSKFSEEVKKIGGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLG  268 (334)
T ss_pred             EEEEEeCCHHHHHHHHHHHHHhcCchhHHHHHHhcCCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHH
Confidence            42                                    23344443221  5788999999999999764422  34555


Q ss_pred             HHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         167 LTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       167 ~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      ..+.+++++.+..... +++++++++++++.++  +++++.|+++++++||+.+.++. ..+|++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~-~~~kvv~~  332 (334)
T PRK13771        269 YIILKDIEIIGHISATKRDVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKS-RIGKILVK  332 (334)
T ss_pred             HHHhcccEEEEecCCCHHHHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCC-CcceEEEe
Confidence            5567899999876554 7899999999999886  45889999999999999998764 34566554

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.77  E-value=1e-17  Score=160.05  Aligned_cols=232  Identities=38%  Similarity=0.652  Sum_probs=178.9

Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL  151 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i  151 (408)
                      +..+.. ...+.|...+..+++++.+.+++..++.+. .|...   -..+...|.++.|.+..+|...+.++.       
T Consensus         9 ~~~~~~-~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~-~g~~~---~~~p~~~g~~~~G~v~~vG~~v~~~~~-------   76 (334)
T cd08234           9 PGELEV-EEVPVPEPGPDEVLIKVAACGICGTDLHIY-EGEFG---AAPPLVPGHEFAGVVVAVGSKVTGFKV-------   76 (334)
T ss_pred             CCceEE-EeccCCCCCCCeEEEEEEEEeEchhhhHHh-cCCCC---CCCCcccccceEEEEEEeCCCCCCCCC-------
Confidence            334444 455667777778888888988887665543 12111   113456788999999988864333333       


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                                                                                                      
T Consensus        77 --------------------------------------------------------------------------------   76 (334)
T cd08234          77 --------------------------------------------------------------------------------   76 (334)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhc
Q psy1413         232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRR  311 (408)
Q Consensus       232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~  311 (408)
                       +|+|...+...|+.|..|..+++++|.....++.. .+|+|++|+.++++.++++|++++..+++......++++++..
T Consensus        77 -Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~  154 (334)
T cd08234          77 -GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVT-RNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDL  154 (334)
T ss_pred             -CCEEEEcCCcCCCCCccccCcChhhCCCcceeccC-CCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHHh
Confidence             88988888888999999999999999887655432 4799999999999999999999998887766666778887777


Q ss_pred             cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ..++++++++|+|+|.+|++++++++.+|+++++++++++++.+.++++|++.+++.++    .+..+.  +.+.++++|
T Consensus       155 ~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~--~~~~~~~vd  228 (334)
T cd08234         155 LGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR----EDPEAQ--KEDNPYGFD  228 (334)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC----CCHHHH--HHhcCCCCc
Confidence            78899999999977999999999999999987888888999999999999988888765    223222  344567899


Q ss_pred             eEEEcccchhhh
Q psy1413         392 KTIDCSGIESTI  403 (408)
Q Consensus       392 ~i~d~~g~~~~~  403 (408)
                      ++|||+|.....
T Consensus       229 ~v~~~~~~~~~~  240 (334)
T cd08234         229 VVIEATGVPKTL  240 (334)
T ss_pred             EEEECCCChHHH
Confidence            999999865443

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.77  E-value=1.1e-17  Score=159.35  Aligned_cols=124  Identities=25%  Similarity=0.239  Sum_probs=104.8

Q ss_pred             cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      +|++|+.++.+.++++|++++.++++.++ ...++++.+ ....++++++++|+|+ |.+|+.++|+++.+|++ ++.++
T Consensus        94 ~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~-v~~~~  172 (327)
T PRK10754         94 AYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTV  172 (327)
T ss_pred             ceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCE-EEEEe
Confidence            45677777778889999999988877655 556677776 4467889999999987 99999999999999998 78888


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++++.+.++++|++.+++.+.    .+..+.+++++.++++|++|||+|+.
T Consensus       173 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vl~~~~~~  220 (327)
T PRK10754        173 GSAQKAQRAKKAGAWQVINYRE----ENIVERVKEITGGKKVRVVYDSVGKD  220 (327)
T ss_pred             CCHHHHHHHHHCCCCEEEcCCC----CcHHHHHHHHcCCCCeEEEEECCcHH
Confidence            8899999999999999998765    56777788888888999999999874

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.77  E-value=3.1e-18  Score=163.73  Aligned_cols=226  Identities=24%  Similarity=0.356  Sum_probs=162.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |.++++|++|++.+ .+.+. ...++|.++|||++|+|+++|++++.+++||||+..+.                     
T Consensus        33 v~~~~~~~~d~~~~-~g~~~-~~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (338)
T cd08254          33 VKAAGVCHSDLHIL-DGGVP-TLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQG  110 (338)
T ss_pred             EEEEeeccHhHHHH-cCCCc-ccCCCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCC
Confidence            46889999999988 44322 23456889999999999999999999999999986322                     


Q ss_pred             ------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccccC
Q psy1413          60 ------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        60 ------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                                  +.......++..|+++++.+.+.++.++.+++.+...... ..+++++|.|+|.+|++++++++.+|.
T Consensus       111 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~  190 (338)
T cd08254         111 MPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA  190 (338)
T ss_pred             ccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC
Confidence                        1122223444556665554444455554444422111111 246788888888899998888876665


Q ss_pred             c-----------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcc
Q psy1413         127 E-----------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVK  162 (408)
Q Consensus       127 ~-----------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~  162 (408)
                      .                                         ++.+++++|..   .+.+++|+++|+++.+|.......
T Consensus       191 ~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~  270 (338)
T cd08254         191 AVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLT  270 (338)
T ss_pred             EEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCc
Confidence            2                                         34455555532   267899999999999998766666


Q ss_pred             cCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         163 IPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       163 ~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      ++...+..++.++.+.+... ..+++++++++++.+++.   .+.++++++.++++.+.+++. .+|+++.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~-~~kvv~~  337 (338)
T cd08254         271 VDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKV-KGRVVLV  337 (338)
T ss_pred             cCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCc-cceEEEe
Confidence            77778889999999987665 789999999999998864   578999999999999987654 3555543

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.77  E-value=3.4e-18  Score=164.06  Aligned_cols=227  Identities=23%  Similarity=0.297  Sum_probs=162.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP----------------------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~----------------------   58 (408)
                      +.+++||++|+..+. |...  ...+|.++|||++|+|+++|+++..+++||+|+..+                      
T Consensus        32 v~~~~i~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (345)
T cd08260          32 VEACGVCRSDWHGWQ-GHDP--DVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQV  108 (345)
T ss_pred             EEEeeccHHHHHHhc-CCCC--CCCCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCc
Confidence            468999999999884 3322  235688999999999999999999999999998611                      


Q ss_pred             -----------CcccccC--CcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccc
Q psy1413          59 -----------EFRNVCL--SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIV  124 (408)
Q Consensus        59 -----------~~~~~~~--~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~  124 (408)
                                 ++...+.  ..++..|+++...+.+.++....+++........+ .+++++|.|+|.+|++++++++.+
T Consensus       109 ~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~  188 (345)
T cd08260         109 QPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASAL  188 (345)
T ss_pred             ccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHc
Confidence                       1112222  14555666666544444444444443221111122 467899999999999998888876


Q ss_pred             cCc------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCC
Q psy1413         125 GHE------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQ  159 (408)
Q Consensus       125 G~~------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~  159 (408)
                      |..                                          ++.+++++|..   ...+++++++|+++.+|....
T Consensus       189 G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~  268 (345)
T cd08260         189 GARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLG  268 (345)
T ss_pred             CCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCC
Confidence            642                                          33445555432   156899999999999997653


Q ss_pred             C---cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         160 D---VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       160 ~---~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      .   ..+++..++.+++++.+..... ..+++++++++++++++.+++++.++++++++||+.+.+++. ..|+++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~v~  343 (345)
T cd08260         269 EEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYAT-AGITVI  343 (345)
T ss_pred             CCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCC-CceEEe
Confidence            2   4566667779999999987655 789999999999999877778999999999999999997654 334443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.77  E-value=9.6e-18  Score=160.46  Aligned_cols=229  Identities=30%  Similarity=0.472  Sum_probs=175.6

Q ss_pred             ccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEEccCC
Q psy1413          79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGS  158 (408)
Q Consensus        79 ~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~~  158 (408)
                      ++.++|.+.+.++++++.+++++..++.+. .|..+.   ......|.++.|++..+|+..+.++.              
T Consensus        16 ~~~~~p~~~~~evlv~v~~~~i~~~d~~~~-~g~~~~---~~~~~~g~e~~G~V~~~G~~v~~~~~--------------   77 (338)
T PRK09422         16 VEKTLRPLKHGEALVKMEYCGVCHTDLHVA-NGDFGD---KTGRILGHEGIGIVKEVGPGVTSLKV--------------   77 (338)
T ss_pred             EEecCCCCCCCeEEEEEEEEeechhHHHHH-cCCCCC---CCCccCCcccceEEEEECCCCccCCC--------------
Confidence            556778788888899999999987766543 111111   12345788999999998865332333              


Q ss_pred             CCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceee
Q psy1413         159 QDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAI  238 (408)
Q Consensus       159 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~  238 (408)
                                                                                                +++|..
T Consensus        78 --------------------------------------------------------------------------Gd~V~~   83 (338)
T PRK09422         78 --------------------------------------------------------------------------GDRVSI   83 (338)
T ss_pred             --------------------------------------------------------------------------CCEEEE
Confidence                                                                                      788876


Q ss_pred             cC-CCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCC
Q psy1413         239 EP-GVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTL  316 (408)
Q Consensus       239 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~  316 (408)
                      .+ ..+|+.|..|..+.++.|.+....+.. .+|+|++|+.++.+.++++|+++++++++.++ ...++++++....+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~~~~~~~~  162 (338)
T PRK09422         84 AWFFEGCGHCEYCTTGRETLCRSVKNAGYT-VDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAIKVSGIKP  162 (338)
T ss_pred             ccCCCCCCCChhhcCCCcccCCCccccCcc-ccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHHHhcCCCC
Confidence            54 357999999999999999876655442 47999999999999999999999998888776 5677888887788999


Q ss_pred             CCEEEEEecchhHHHHHHHHHH-hCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         317 GSKVLITGAGPIGLVTLLTARA-LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~-~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      ++++||+|+|++|+.++|+++. +|++ |+++++++++.+.++++|++.++++++.   .+..+.+++.++  ++|.+|+
T Consensus       163 g~~vlV~g~g~vG~~~~~la~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~v~~~~~--~~d~vi~  236 (338)
T PRK09422        163 GQWIAIYGAGGLGNLALQYAKNVFNAK-VIAVDINDDKLALAKEVGADLTINSKRV---EDVAKIIQEKTG--GAHAAVV  236 (338)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHhCCCe-EEEEeCChHHHHHHHHcCCcEEeccccc---ccHHHHHHHhcC--CCcEEEE
Confidence            9999999999999999999998 4996 8889999999999999999999887531   334556666664  6896666


Q ss_pred             cccchhhhhhc
Q psy1413         396 CSGIESTIKLG  406 (408)
Q Consensus       396 ~~g~~~~~~~~  406 (408)
                      ++++...++.+
T Consensus       237 ~~~~~~~~~~~  247 (338)
T PRK09422        237 TAVAKAAFNQA  247 (338)
T ss_pred             eCCCHHHHHHH
Confidence            55555555443

>cd05281 TDH Threonine dehydrogenase

Probab=99.77  E-value=2.5e-18  Score=164.75  Aligned_cols=228  Identities=28%  Similarity=0.401  Sum_probs=157.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |.++|+|++|++.+...........+|.++|||++|+|+++|+++..+++||+|...+.                     
T Consensus        32 v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (341)
T cd05281          32 VLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTK  111 (341)
T ss_pred             EEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccc
Confidence            45889999999876322111122356788999999999999999999999999987421                     


Q ss_pred             ------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCc
Q psy1413          60 ------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE  127 (408)
Q Consensus        60 ------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~  127 (408)
                                  +...+...++..|++++. +.+.++.++..++.... .....+++++|.|+|.+|++++++++.+|..
T Consensus       112 ~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~-~~a~~~~~~~~a~~~~~-~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~  189 (341)
T cd05281         112 ILGVDTDGCFAEYVVVPEENLWKNDKDIPP-EIASIQEPLGNAVHTVL-AGDVSGKSVLITGCGPIGLMAIAVAKAAGAS  189 (341)
T ss_pred             eEeccCCCcceEEEEechHHcEECcCCCCH-HHhhhhhHHHHHHHHHH-hcCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence                        223333445555665554 33333333322221111 1112578899988889999988888777652


Q ss_pred             ------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcc
Q psy1413         128 ------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVK  162 (408)
Q Consensus       128 ------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~  162 (408)
                                                                ++.+++++|+.   .+.+++|+++|+++.+|.......
T Consensus       190 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~  269 (341)
T cd05281         190 LVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVD  269 (341)
T ss_pred             EEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcc
Confidence                                                      22334444332   256899999999999997665544


Q ss_pred             cCHH-HHHhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         163 IPLV-LTMTKEIDIRGVFRY--ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       163 ~~~~-~~~~~~~~l~g~~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +++. .+.++++++.+....  .+.+.+++++++++.+++.+++.+.++++++++||+.+.+++  .+|++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~--~gk~vv~  340 (341)
T cd05281         270 IDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK--CGKVVLY  340 (341)
T ss_pred             cccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC--CceEEec
Confidence            4433 477788888876633  256889999999999988777889999999999999998876  5677654

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.76  E-value=1.3e-17  Score=159.46  Aligned_cols=230  Identities=33%  Similarity=0.520  Sum_probs=178.0

Q ss_pred             ccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEEccCC
Q psy1413          79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGS  158 (408)
Q Consensus        79 ~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~~  158 (408)
                      ...+.|...+..+++.+.+.+++..++.+. .|... .........|.++.|.+..+|+..+.++.              
T Consensus        17 ~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~-~g~~~-~~~~~~~~~g~~~~G~v~~~G~~v~~~~~--------------   80 (338)
T cd08254          17 EEVPVPEPGPGEVLVKVKAAGVCHSDLHIL-DGGVP-TLTKLPLTLGHEIAGTVVEVGAGVTNFKV--------------   80 (338)
T ss_pred             eccCCCCCCCCeEEEEEEEEeeccHhHHHH-cCCCc-ccCCCCEeccccccEEEEEECCCCccCCC--------------
Confidence            445666667778888888888877665543 11111 11123446788899999888865333333              


Q ss_pred             CCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceee
Q psy1413         159 QDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAI  238 (408)
Q Consensus       159 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~  238 (408)
                                                                                                +++|..
T Consensus        81 --------------------------------------------------------------------------Gd~V~~   86 (338)
T cd08254          81 --------------------------------------------------------------------------GDRVAV   86 (338)
T ss_pred             --------------------------------------------------------------------------CCEEEE
Confidence                                                                                      899988


Q ss_pred             cCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCC
Q psy1413         239 EPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTL  316 (408)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~  316 (408)
                      .|..+|+.|..|..++.++|......+.. ..|+|++|+.++.+.++++|++++.++++.+. .+.++++++ ....+++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~  165 (338)
T cd08254          87 PAVIPCGACALCRRGRGNLCLNQGMPGLG-IDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKP  165 (338)
T ss_pred             CCCCCCCCChhhhCcCcccCCCCCccccc-cCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCC
Confidence            88889999999999999999766555553 57999999999999999999999988877665 788888887 4456899


Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ++++||.|+|++|+.++++++.+|++ |+.+++++++.+.++++|++.+++.++    ....+.+ +.+.++++|+++||
T Consensus       166 ~~~vli~g~g~vG~~~~~la~~~G~~-V~~~~~s~~~~~~~~~~g~~~~~~~~~----~~~~~~~-~~~~~~~~D~vid~  239 (338)
T cd08254         166 GETVLVIGLGGLGLNAVQIAKAMGAA-VIAVDIKEEKLELAKELGADEVLNSLD----DSPKDKK-AAGLGGGFDVIFDF  239 (338)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCCC----cCHHHHH-HHhcCCCceEEEEC
Confidence            99999986699999999999999998 888889999999999999999888765    3444445 55667789999999


Q ss_pred             ccchhhhhh
Q psy1413         397 SGIESTIKL  405 (408)
Q Consensus       397 ~g~~~~~~~  405 (408)
                      +|....++.
T Consensus       240 ~g~~~~~~~  248 (338)
T cd08254         240 VGTQPTFED  248 (338)
T ss_pred             CCCHHHHHH
Confidence            986654443

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08251 polyketide_synthase polyketide synthase

Probab=99.76  E-value=2.5e-17  Score=154.65  Aligned_cols=125  Identities=27%  Similarity=0.358  Sum_probs=109.3

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      |+|++|..++++.++++|++++.++++.++ .+.++++++....++++++++|+|+ |++|+.++|+++.+|++ ++.++
T Consensus        74 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~-v~~~~  152 (303)
T cd08251          74 GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGAE-IYATA  152 (303)
T ss_pred             cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEc
Confidence            567888899999999999999988888776 6777888887788999999999988 99999999999999997 88888


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++++.+.++++|++.+++...    .+..+.+++++.++++|.++|++++.
T Consensus       153 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~i~~~~~~~~~d~v~~~~~~~  200 (303)
T cd08251         153 SSDDKLEYLKQLGVPHVINYVE----EDFEEEIMRLTGGRGVDVVINTLSGE  200 (303)
T ss_pred             CCHHHHHHHHHcCCCEEEeCCC----ccHHHHHHHHcCCCCceEEEECCcHH
Confidence            8888999999999999998766    66777788888888999999999754

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.76  E-value=1.9e-18  Score=162.82  Aligned_cols=222  Identities=18%  Similarity=0.201  Sum_probs=164.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      +.++|+|++|++... .      ..+|.++|||++|+|+++|++++.|++||+|+...      ++...+...++..|++
T Consensus        33 v~~~~i~~~d~~~~~-~------~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~  105 (305)
T cd08270          33 VAAISLNRGELKFAA-E------RPDGAVPGWDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDG  105 (305)
T ss_pred             EEEEecCHHHHHhhc-c------CCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecCCcceeeEEEEchHHeEECCCC
Confidence            468999999998763 2      13367899999999999999999999999998653      3446666788889998


Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEcc-CccccccccccccccCc--------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTH-GQIGDFRLSDPMIVGHE--------------------------  127 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~-G~vG~~~i~~a~~~G~~--------------------------  127 (408)
                      +++.+.+.++..+.+++.+........+++++|.|+ |++|++++++++.+|+.                          
T Consensus       106 ~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~  185 (305)
T cd08270         106 VSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGG  185 (305)
T ss_pred             CCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecc
Confidence            888666666666555543221112234889999985 89999998888877653                          


Q ss_pred             -------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHh--cCcEEEEeecCC-----CcHHHHHH
Q psy1413         128 -------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMT--KEIDIRGVFRYA-----NDYPIALA  190 (408)
Q Consensus       128 -------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~--~~~~l~g~~~~~-----~~~~~~~~  190 (408)
                             ++.+++++|...  +.+++++++|+++.+|.... ...++...+..  ++.++.+.+...     ..++.+++
T Consensus       186 ~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
T cd08270         186 SELSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLG  265 (305)
T ss_pred             ccccCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHH
Confidence                   234445554332  67899999999999996543 34566666655  789988877552     56888999


Q ss_pred             HHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         191 MVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       191 l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +++++++++.  +.+++++++++++|+.+.+++ ..+|++++
T Consensus       266 ~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~-~~gkvvi~  304 (305)
T cd08270         266 LVAAGRLDPR--IGWRGSWTEIDEAAEALLARR-FRGKAVLD  304 (305)
T ss_pred             HHHCCCccce--eccEEcHHHHHHHHHHHHcCC-CCceEEEe
Confidence            9999999753  788999999999999998764 34566654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=99.76  E-value=1.9e-17  Score=154.01  Aligned_cols=124  Identities=26%  Similarity=0.310  Sum_probs=104.6

Q ss_pred             cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      +|++|..++.+.++++|+++++++++.++ ...++++++ ....++++++++|+|+ |++|++++++++.+|++ |+.++
T Consensus        58 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~-v~~~~  136 (288)
T smart00829       58 SFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAE-VFATA  136 (288)
T ss_pred             ceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEe
Confidence            45677777778899999999988888776 566777776 5677889999999997 99999999999999997 88888


Q ss_pred             cChhhHHHHHHcCC--CeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         349 ILEHKLKTAKEMGA--DATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       349 ~~~~~~~~~~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++++.+.++++|+  +.++++++    .+..+.+.+.+.++++|.++|++|+.
T Consensus       137 ~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~~~~  186 (288)
T smart00829      137 GSPEKRDFLRELGIPDDHIFSSRD----LSFADEILRATGGRGVDVVLNSLAGE  186 (288)
T ss_pred             CCHHHHHHHHHcCCChhheeeCCC----ccHHHHHHHHhCCCCcEEEEeCCCHH
Confidence            89999999999998  78888766    56677788877777899999999853

Enoylreductase in Polyketide synthases.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.75  E-value=3.6e-17  Score=156.01  Aligned_cols=126  Identities=21%  Similarity=0.311  Sum_probs=105.8

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |+|++|+.++++.++++|++++.++++.+. ...++++++. ...++++++++|+|+ |++|+.++++++.+|++ ++++
T Consensus        93 g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~  171 (334)
T PTZ00354         93 GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIIT  171 (334)
T ss_pred             CceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEE
Confidence            456788888888999999999988777665 6677888874 367899999999998 99999999999999998 5667


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHH-HHHHHHHHhcCCCCceEEEcccchh
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEE-ISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~-~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      .+++++.+.++++|++.+++...    .+ ..+.+++.+.++++|.+|||+|+..
T Consensus       172 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~i~~~~~~~  222 (334)
T PTZ00354        172 TSSEEKVDFCKKLAAIILIRYPD----EEGFAPKVKKLTGEKGVNLVLDCVGGSY  222 (334)
T ss_pred             eCCHHHHHHHHHcCCcEEEecCC----hhHHHHHHHHHhCCCCceEEEECCchHH
Confidence            88899999998999999998765    33 6777888887789999999998643

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.75  E-value=3.1e-17  Score=156.71  Aligned_cols=231  Identities=31%  Similarity=0.493  Sum_probs=179.1

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV  152 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv  152 (408)
                      ..+.+ ...+.|.+.+..+.+.+..++++..++.+.. |... ........+|.++.|.+..+|+..+.++.        
T Consensus        13 ~~~~~-~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~v~~~G~~~~~~~~--------   81 (342)
T cd08266          13 EVLEY-GDLPEPEPGPDEVLVRVKAAALNHLDLWVRR-GMPG-IKLPLPHILGSDGAGVVEAVGPGVTNVKP--------   81 (342)
T ss_pred             cceeE-eecCCCCCCCCeEEEEEEeeecCHHHHHHhc-CCCC-CCCCCCeecccceEEEEEEeCCCCCCCCC--------
Confidence            34445 3334454556677888888888876665532 2111 01233456788999999988864332333        


Q ss_pred             EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                                                                                                      
T Consensus        82 --------------------------------------------------------------------------------   81 (342)
T cd08266          82 --------------------------------------------------------------------------------   81 (342)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-h
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-R  310 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~  310 (408)
                      +|+|+..+..+|+.|.+|.++.+++|.+..++|.. ..|+|++|..++++.++++|+++++++++.++ ...++++++ .
T Consensus        82 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~  160 (342)
T cd08266          82 GQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEH-VDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT  160 (342)
T ss_pred             CCEEEEccccccccchhhccccccccccccccccc-cCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence            89999888889999999999999999987776653 47899999999999999999999988887776 566777776 5


Q ss_pred             ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         311 RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       311 ~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      ...++++++++|+|+ +++|+.++++++.+|++ ++.+++++++.+.+..++.+.+++..+    .+..+.+.+.+.+++
T Consensus       161 ~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  235 (342)
T cd08266         161 RARLRPGETVLVHGAGSGVGSAAIQIAKLFGAT-VIATAGSEDKLERAKELGADYVIDYRK----EDFVREVRELTGKRG  235 (342)
T ss_pred             hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCeEEecCC----hHHHHHHHHHhCCCC
Confidence            577889999999999 89999999999999998 888888988888888888888887655    566666777766678


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.++|++|+.
T Consensus       236 ~d~~i~~~g~~  246 (342)
T cd08266         236 VDVVVEHVGAA  246 (342)
T ss_pred             CcEEEECCcHH
Confidence            99999999864

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.75  E-value=4.4e-17  Score=155.27  Aligned_cols=123  Identities=22%  Similarity=0.229  Sum_probs=98.6

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      |+|++|..++++.++++|++. .+.+.+.....++++++ ....++++++++|+|+ |++|+.++|+++.+|++ ++.++
T Consensus        94 g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~-v~~~~  171 (329)
T cd08250          94 GAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCH-VIGTC  171 (329)
T ss_pred             cceeEEEEechHHeEECCCCc-chhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCe-EEEEe
Confidence            456778888888899999873 23333444777888887 4467899999999998 99999999999999998 88888


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++++.+.++++|++.+++.+.    .+..+.+.+.. ++++|.+||++|+.
T Consensus       172 ~~~~~~~~~~~~g~~~v~~~~~----~~~~~~~~~~~-~~~vd~v~~~~g~~  218 (329)
T cd08250         172 SSDEKAEFLKSLGCDRPINYKT----EDLGEVLKKEY-PKGVDVVYESVGGE  218 (329)
T ss_pred             CcHHHHHHHHHcCCceEEeCCC----ccHHHHHHHhc-CCCCeEEEECCcHH
Confidence            8888899999999999988765    45556666655 46899999999864

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.75  E-value=9.9e-18  Score=160.58  Aligned_cols=225  Identities=26%  Similarity=0.326  Sum_probs=159.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP----------------------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~----------------------   58 (408)
                      +.+.++|++|++.+. +.++ .+.+.|.++|||++|+|+++|++++.+++||+|+..+                      
T Consensus        33 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (341)
T cd08297          33 LEASGVCHTDLHAAL-GDWP-VKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQ  110 (341)
T ss_pred             EEEeecchhHHHHHc-CCCC-cCCCCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCc
Confidence            358899999999874 3322 1235577899999999999999999999999998642                      


Q ss_pred             ------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccC-ccccccccccccc
Q psy1413          59 ------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHG-QIGDFRLSDPMIV  124 (408)
Q Consensus        59 ------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G-~vG~~~i~~a~~~  124 (408)
                                  ++...+.+.++..|+++++++.+.++....+++..... ..+ .+++++|.|++ .+|++++++++.+
T Consensus       111 ~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~  189 (341)
T cd08297         111 KNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAM  189 (341)
T ss_pred             cccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHC
Confidence                        12234445566667777765555555555554422111 122 47889999855 5999998888877


Q ss_pred             cCc------------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEccCCC
Q psy1413         125 GHE------------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQ  159 (408)
Q Consensus       125 G~~------------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~  159 (408)
                      |..                                          ++.++++.++..   +.+++++++|+++.+|....
T Consensus       190 g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~  269 (341)
T cd08297         190 GLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG  269 (341)
T ss_pred             CCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC
Confidence            752                                          222333233221   57899999999999997654


Q ss_pred             C-cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         160 D-VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       160 ~-~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      . .+++...++.+++++.+..... +++++++++++++++++  .+ +.|++++++++|+.+.++. ..+|++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~-~~gkvvi~  340 (341)
T cd08297         270 GFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGK-IAGRVVVD  340 (341)
T ss_pred             CCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCC-ccceEEEe
Confidence            3 4666677889999999876655 78999999999999864  33 6799999999999998764 45566654

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.75  E-value=6.8e-18  Score=161.85  Aligned_cols=225  Identities=29%  Similarity=0.426  Sum_probs=158.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      +.++++|++|+..+...    +...+|.++|+|++|+|+++|+++..|++||+|...+.                     
T Consensus        31 v~~~~~n~~d~~~~~~~----~~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (343)
T cd08236          31 VKACGICGSDIPRYLGT----GAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYD  106 (343)
T ss_pred             EEEEEECccchHhhcCC----CCCCCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcc
Confidence            46899999999987422    23346789999999999999999999999999987521                     


Q ss_pred             ------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCc
Q psy1413          60 ------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE  127 (408)
Q Consensus        60 ------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~  127 (408)
                                  +...+...++..|+++++.+.+.+ .+..+++.......-..+++++|+|+|.+|++++++++.+|..
T Consensus       107 ~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~  185 (343)
T cd08236         107 YIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAK  185 (343)
T ss_pred             eEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence                        223344456666777766444333 2332332211111112467899998888999998888877764


Q ss_pred             ------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCc-
Q psy1413         128 ------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDV-  161 (408)
Q Consensus       128 ------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~-  161 (408)
                                                                ++.+++++|..   ...+++++++|+++.+|...... 
T Consensus       186 ~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~  265 (343)
T cd08236         186 RVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVT  265 (343)
T ss_pred             EEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcc
Confidence                                                      23344444332   25689999999999999765442 


Q ss_pred             --ccCHHHHHhcCcEEEEeecC------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         162 --KIPLVLTMTKEIDIRGVFRY------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       162 --~~~~~~~~~~~~~l~g~~~~------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                        ..++..++.++.++.+.+..      .+.+++++++++++++.+.+.+.+.++++++.++++.+.+++....|++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v  342 (343)
T cd08236         266 LSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVL  342 (343)
T ss_pred             cccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEe
Confidence              23445667889999887643      2458889999999998765668899999999999999998666666665

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=99.75  E-value=1.8e-18  Score=164.62  Aligned_cols=219  Identities=15%  Similarity=0.102  Sum_probs=152.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---CcccccCCcceec----cc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---EFRNVCLSPILRR----RF   73 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---~~~~~~~~~~~~~----p~   73 (408)
                      |+++|||+.|..-.    .+.  ..+|.++|+|++|+|+++|+   .|++||||....   ++.......+...    |+
T Consensus        38 v~a~~~n~~~~~g~----~~~--~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~~~~~~~~~~~~~~~~~l~~~~p~  108 (325)
T TIGR02825        38 ALFLSVDPYMRVAA----KRL--KEGDTMMGQQVARVVESKNV---ALPKGTIVLASPGWTSHSISDGKDLEKLLTEWPD  108 (325)
T ss_pred             EEEEecCHHHhccc----CcC--CCCCcEecceEEEEEEeCCC---CCCCCCEEEEecCceeeEEechhheEEccccccC
Confidence            56899999654322    111  23478999999999999774   699999998642   3334444444444    77


Q ss_pred             eeeeccc-ccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc-----------------------
Q psy1413          74 SLRFREQ-KPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE-----------------------  127 (408)
Q Consensus        74 ~~~~~~~-~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~-----------------------  127 (408)
                      .++++++ +.++.++.+++.+......+ .+++++|+| +|++|++++|+++.+|+.                       
T Consensus       109 ~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi  188 (325)
T TIGR02825       109 TLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAF  188 (325)
T ss_pred             CCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEE
Confidence            7777544 45777766666432222223 478899998 699999999998877751                       


Q ss_pred             -------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-----Ccc--cCHHHHHhcCcEEEEee
Q psy1413         128 -------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-----DVK--IPLVLTMTKEIDIRGVF  179 (408)
Q Consensus       128 -------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-----~~~--~~~~~~~~~~~~l~g~~  179 (408)
                                         ++.+++++|...  +++++++++|+++.+|....     ..+  .....+.++++++.+.+
T Consensus       189 ~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  268 (325)
T TIGR02825       189 NYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFI  268 (325)
T ss_pred             eccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEE
Confidence                               334455555332  67899999999999996432     122  22446788899998876


Q ss_pred             cC-------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         180 RY-------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       180 ~~-------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      ..       .+.++++++++++|++++.  +..+|+|+++.+||+.+.+++. .+|+++
T Consensus       269 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~-~gkvVv  324 (325)
T TIGR02825       269 VNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGEN-LGKTIV  324 (325)
T ss_pred             ehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCC-CCeEEe
Confidence            32       1357889999999999865  5567899999999999998763 456654

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.75  E-value=3.3e-17  Score=152.48  Aligned_cols=124  Identities=27%  Similarity=0.299  Sum_probs=103.7

Q ss_pred             cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      +|++|..++.+.++++|++++..+++.++ ...+++.++ ....++++++++|+|+ |++|+.++|+++.+|++ ++.++
T Consensus        62 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~  140 (293)
T cd05195          62 AFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAE-VFATV  140 (293)
T ss_pred             cccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCE-EEEEe
Confidence            35567777778889999999987777765 566777776 4477899999999987 99999999999999997 88888


Q ss_pred             cChhhHHHHHHcC--CCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         349 ILEHKLKTAKEMG--ADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       349 ~~~~~~~~~~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++++.+.+++.|  ++.+++..+    .+..+.+++.+.++++|.++|++|+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~~~~  190 (293)
T cd05195         141 GSEEKREFLRELGGPVDHIFSSRD----LSFADGILRATGGRGVDVVLNSLSGE  190 (293)
T ss_pred             CCHHHHHHHHHhCCCcceEeecCc----hhHHHHHHHHhCCCCceEEEeCCCch
Confidence            8888888888888  788888765    57778888888788999999999976

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.75  E-value=4e-17  Score=154.15  Aligned_cols=124  Identities=30%  Similarity=0.302  Sum_probs=103.0

Q ss_pred             cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      +|++|..++.+.++++|++++..+++.++ ...++++++ ....++++++++|+|+ |++|+.++++++.+|++ ++.++
T Consensus        90 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~-v~~~~  168 (320)
T cd05286          90 AYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGAT-VIGTV  168 (320)
T ss_pred             ceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEc
Confidence            34566677777888999999887777555 556677776 4467889999999997 99999999999999997 88888


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++++.+.++++|++.+++.++    .+..+.+++.+.++++|.+|||+|+.
T Consensus       169 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vl~~~~~~  216 (320)
T cd05286         169 SSEEKAELARAAGADHVINYRD----EDFVERVREITGGRGVDVVYDGVGKD  216 (320)
T ss_pred             CCHHHHHHHHHCCCCEEEeCCc----hhHHHHHHHHcCCCCeeEEEECCCcH
Confidence            8889999999999999988766    66777788888778999999999874

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.75  E-value=3.6e-17  Score=155.64  Aligned_cols=124  Identities=25%  Similarity=0.326  Sum_probs=100.7

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh---ccCcC-CCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR---RAGVT-LGSKVLITGA-GPIGLVTLLTARALGASR  343 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~---~~~~~-~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~  343 (408)
                      +|+|++|..++++.++++|++++.++++.++ ...++++++.   +.... .+++++|+|+ |++|+.++|+|+.+|++ 
T Consensus        95 ~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-  173 (326)
T cd08289          95 HGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYE-  173 (326)
T ss_pred             CCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCe-
Confidence            5789999999999999999999998888777 4455666552   23333 4679999999 99999999999999997 


Q ss_pred             EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      |+++++++++.+.++++|++.+++.++    .. .+.+++.+ ++++|.+|||+|+.
T Consensus       174 v~~~~~~~~~~~~~~~~g~~~v~~~~~----~~-~~~~~~~~-~~~~d~vld~~g~~  224 (326)
T cd08289         174 VVASTGKADAADYLKKLGAKEVIPREE----LQ-EESIKPLE-KQRWAGAVDPVGGK  224 (326)
T ss_pred             EEEEecCHHHHHHHHHcCCCEEEcchh----HH-HHHHHhhc-cCCcCEEEECCcHH
Confidence            888889999999999999999988754    22 44555554 56899999999874

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.75  E-value=2.4e-17  Score=157.42  Aligned_cols=223  Identities=32%  Similarity=0.507  Sum_probs=173.4

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ +..+.|.+.+..+.+++...+++..++... .|...  ........|.++.|++..+|+....++.          
T Consensus        13 ~~~-~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~-~g~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~----------   78 (334)
T PRK13771         13 YRI-EEVPDPKPGKDEVVIKVNYAGLCYRDLLQL-QGFYP--RMKYPVILGHEVVGTVEEVGENVKGFKP----------   78 (334)
T ss_pred             cEE-EeCCCCCCCCCeEEEEEEEEeechhhHHHh-cCCCC--CCCCCeeccccceEEEEEeCCCCccCCC----------
Confidence            555 455677777888888888888887665432 11110  1122345788999999888864322333          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    ++
T Consensus        79 ------------------------------------------------------------------------------G~   80 (334)
T PRK13771         79 ------------------------------------------------------------------------------GD   80 (334)
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          88


Q ss_pred             ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccC
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAG  313 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~  313 (408)
                      +|+..+..+|+.|.+|..+.++.|+...+++. ..+|+|++|+.++.+.++++|++++.++++.++ ...++++++....
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~~  159 (334)
T PRK13771         81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAG  159 (334)
T ss_pred             EEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhcC
Confidence            88888778999999999999999998777664 357999999999999999999999988888777 5677888876668


Q ss_pred             cCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         314 VTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       314 ~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ++++++++|+|+ |.+|++++|+++.+|++ ++.+++++++.+.++++ ++.+++.+      +..+.+++.  + ++|+
T Consensus       160 ~~~~~~vlI~g~~g~~g~~~~~la~~~g~~-vi~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~v~~~--~-~~d~  228 (334)
T PRK13771        160 VKKGETVLVTGAGGGVGIHAIQVAKALGAK-VIAVTSSESKAKIVSKY-ADYVIVGS------KFSEEVKKI--G-GADI  228 (334)
T ss_pred             CCCCCEEEEECCCccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHH-HHHhcCch------hHHHHHHhc--C-CCcE
Confidence            899999999999 99999999999999998 88888889999888888 77777653      233444443  2 6999


Q ss_pred             EEEcccchh
Q psy1413         393 TIDCSGIES  401 (408)
Q Consensus       393 i~d~~g~~~  401 (408)
                      +|||+|+..
T Consensus       229 ~ld~~g~~~  237 (334)
T PRK13771        229 VIETVGTPT  237 (334)
T ss_pred             EEEcCChHH
Confidence            999998754

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.75  E-value=6.1e-18  Score=161.51  Aligned_cols=223  Identities=29%  Similarity=0.479  Sum_probs=157.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      +.++++|++|++... |.   ++..+|.++|+|++|+|+++|++++.+++||+|+..+.                     
T Consensus        31 v~~~~l~~~d~~~~~-g~---~~~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (334)
T cd08234          31 VAACGICGTDLHIYE-GE---FGAAPPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLT  106 (334)
T ss_pred             EEEEeEchhhhHHhc-CC---CCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcc
Confidence            468999999999874 32   22347889999999999999999999999999986221                     


Q ss_pred             ------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccccC
Q psy1413          60 ------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        60 ------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                                  +...+.+.++..|+++++.+.+ ...+..+++... .... ..+++++|+|+|.+|.+++++++.+|+
T Consensus       107 ~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa-~~~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~  184 (334)
T cd08234         107 AVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAA-LAEPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGA  184 (334)
T ss_pred             eeccCCCCcceeEEEecHHHcEECcCCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                        1223334455566666653322 222222222111 1111 247889999988999998888887775


Q ss_pred             c-----------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEccCCC--C
Q psy1413         127 E-----------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQ--D  160 (408)
Q Consensus       127 ~-----------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~--~  160 (408)
                      .                                         ++.++++++...   ..+++++++|+++.+|....  .
T Consensus       185 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~  264 (334)
T cd08234         185 SRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDAR  264 (334)
T ss_pred             cEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCC
Confidence            3                                         233444444321   57899999999999996543  3


Q ss_pred             cccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         161 VKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       161 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      ..+....+..+++++.+.......+++++++++++++++.++++++|++++++++++.+.+ . ..+|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~-~~~k~vi  333 (334)
T cd08234         265 VSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-G-GALKVVV  333 (334)
T ss_pred             cccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-C-CceEEEe
Confidence            4455555666889998887666789999999999999877778899999999999999998 4 4566664

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.74  E-value=7.4e-18  Score=164.85  Aligned_cols=230  Identities=18%  Similarity=0.187  Sum_probs=155.3

Q ss_pred             CCeeeecccchhhhhcCCCCC------C-CCCCC-ccccCCccEEEEEeCCCCCCCCCCCEEEEccCc------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGD------F-RLSDP-MIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~------~-~~~~P-~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~------------   60 (408)
                      +.++|+|++|++......+..      + +...| .++|||++|+|+++|++++.+++||+|++.+..            
T Consensus        44 v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~  123 (398)
T TIGR01751        44 VMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGD  123 (398)
T ss_pred             EEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCc
Confidence            358999999998763221100      0 00223 379999999999999999999999999875421            


Q ss_pred             ----------------------ccccCCcceeccceeeecccccCCCCCCcceEEEEe--eeee-cCCeEEEEcc-Cccc
Q psy1413          61 ----------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMH--CVGI-CGSDVHYLTH-GQIG  114 (408)
Q Consensus        61 ----------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~--~~~~-~g~~vlv~g~-G~vG  114 (408)
                                            .......++..|+++++++.+.++....+++.+...  ...+ .+++++|+|+ |.+|
T Consensus       124 ~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG  203 (398)
T TIGR01751       124 PMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLG  203 (398)
T ss_pred             cccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHH
Confidence                                  122222334445555543333333333333321111  1112 4688999995 9999


Q ss_pred             cccccccccccCc----------------------------------------------------------------cee
Q psy1413         115 DFRLSDPMIVGHE----------------------------------------------------------------ASG  130 (408)
Q Consensus       115 ~~~i~~a~~~G~~----------------------------------------------------------------~~~  130 (408)
                      ++++++++.+|+.                                                                ++.
T Consensus       204 ~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~  283 (398)
T TIGR01751       204 SYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDI  283 (398)
T ss_pred             HHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceE
Confidence            9998888877663                                                                223


Q ss_pred             EEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeee
Q psy1413         131 IVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHN  206 (408)
Q Consensus       131 vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~  206 (408)
                      +++++|...  ..+++++++|+++.+|.... +..++...+++++.++.+..... +++++++++++++++++  +++++
T Consensus       284 vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~  361 (398)
T TIGR01751       284 VFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDP--TLSKV  361 (398)
T ss_pred             EEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCccc--ceeeE
Confidence            344444221  56889999999999997654 35667777888899998887665 66889999999998874  48899


Q ss_pred             eccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         207 YLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       207 ~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      +++++++++|+.+.++.. .+|+++..
T Consensus       362 ~~l~~~~~a~~~~~~~~~-~gkvvv~~  387 (398)
T TIGR01751       362 YPLEEIGQAHQDVHRNHH-QGNVAVLV  387 (398)
T ss_pred             EcHHHHHHHHHHHHcCCC-CceEEEEe
Confidence            999999999999987654 45666553

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=99.74  E-value=3e-17  Score=156.19  Aligned_cols=206  Identities=24%  Similarity=0.293  Sum_probs=155.2

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHH-HhhccCCcEE
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH-LKATRPGGCL  151 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~-~~~l~~gG~i  151 (408)
                      +.+.+ +..+.|.+.+.++++.+.++++++.++.+. .|.... .......+|.++.|++..+|+.... ++.       
T Consensus        16 ~~~~~-~~~~~p~~~~~evlv~v~~~gi~~~d~~~~-~g~~~~-~~~~p~v~G~e~~G~V~~vG~~v~~~~~v-------   85 (324)
T cd08291          16 KELSL-PEPEVPEPGPGEVLIKVEAAPINPSDLGFL-KGQYGS-TKALPVPPGFEGSGTVVAAGGGPLAQSLI-------   85 (324)
T ss_pred             cEEEe-cccCCCCCCCCeEEEEEEEccCCHHHHHHh-cCcCCC-CCCCCcCCCcceEEEEEEECCCccccCCC-------
Confidence            35666 566778888889999999999988776553 121111 1123467899999999999965332 333       


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                                                                                                      
T Consensus        86 --------------------------------------------------------------------------------   85 (324)
T cd08291          86 --------------------------------------------------------------------------------   85 (324)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh
Q psy1413         232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR  310 (408)
Q Consensus       232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~  310 (408)
                       +|+|...+                           ..+|+|++|+.++++.++++|+++++++++.++ ...+++..+.
T Consensus        86 -Gd~V~~~~---------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~  137 (324)
T cd08291          86 -GKRVAFLA---------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLE  137 (324)
T ss_pred             -CCEEEecC---------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHH
Confidence             77775321                           115999999999999999999999988887554 3445554444


Q ss_pred             ccCcCCCCEEEEE-ec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         311 RAGVTLGSKVLIT-GA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       311 ~~~~~~~~~~lv~-G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      .... ++++++|+ |+ |++|++++|+++.+|++ ++++++++++++.++++|+++++++++    .++.+.+++++.++
T Consensus       138 ~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~i~~~~----~~~~~~v~~~~~~~  211 (324)
T cd08291         138 TARE-EGAKAVVHTAAASALGRMLVRLCKADGIK-VINIVRRKEQVDLLKKIGAEYVLNSSD----PDFLEDLKELIAKL  211 (324)
T ss_pred             hhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEECCC----ccHHHHHHHHhCCC
Confidence            4444 45555565 66 99999999999999997 888889999999999999999999876    67778888888888


Q ss_pred             CCceEEEcccchhh
Q psy1413         389 QPDKTIDCSGIEST  402 (408)
Q Consensus       389 ~~d~i~d~~g~~~~  402 (408)
                      ++|++||++|+...
T Consensus       212 ~~d~vid~~g~~~~  225 (324)
T cd08291         212 NATIFFDAVGGGLT  225 (324)
T ss_pred             CCcEEEECCCcHHH
Confidence            99999999997654

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.74  E-value=6.6e-18  Score=160.67  Aligned_cols=214  Identities=19%  Similarity=0.209  Sum_probs=150.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      +.++|+|++|++.+. +.   ....+|.++|||++|+|+++|++++.+++||+|+..+...                   
T Consensus        33 v~~~~i~~~d~~~~~-~~---~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~  108 (325)
T cd08264          33 VKMAGVNPVDYNVIN-AV---KVKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGG  108 (325)
T ss_pred             EEEEEechHHHHHHh-CC---CCCCCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccc
Confidence            458999999999874 32   1224578999999999999999999999999998764221                   


Q ss_pred             --------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-Ccccccccccccccc
Q psy1413          62 --------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVG  125 (408)
Q Consensus        62 --------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G  125 (408)
                                    ..+...++..|+++++++.+.++....+++..... ..+ .+++++|+|+ |++|++++++++.+|
T Consensus       109 ~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G  187 (325)
T cd08264         109 IIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMG  187 (325)
T ss_pred             eeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcC
Confidence                          12222334445555543344444333333221111 222 4788999985 999999999988877


Q ss_pred             Ccc----------------------------------eeEEEccCchH--HHHhhccCCcEEEEEccCC-CCcccCHHHH
Q psy1413         126 HEA----------------------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGS-QDVKIPLVLT  168 (408)
Q Consensus       126 ~~~----------------------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~  168 (408)
                      ...                                  +.+++++|...  +++++++++|+++.+|... ....+++..+
T Consensus       188 ~~v~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~  267 (325)
T cd08264         188 AEVIAVSRKDWLKEFGADEVVDYDEVEEKVKEITKMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDL  267 (325)
T ss_pred             CeEEEEeHHHHHHHhCCCeeecchHHHHHHHHHhCCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHH
Confidence            642                                  23344444321  5789999999999999753 3467777788


Q ss_pred             HhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCC
Q psy1413         169 MTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGA  223 (408)
Q Consensus       169 ~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~  223 (408)
                      +.++.++.+.+... ++++++++++...+    ..++++|+++|+++||+.+.+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~a~~~~~~~~  319 (325)
T cd08264         268 YSKQISIIGSTGGTRKELLELVKIAKDLK----VKVWKTFKLEEAKEALKELFSKE  319 (325)
T ss_pred             hhcCcEEEEccCCCHHHHHHHHHHHHcCC----ceeEEEEcHHHHHHHHHHHHcCC
Confidence            88999999987665 78999999996433    24779999999999999998754

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.74  E-value=8.3e-17  Score=153.38  Aligned_cols=226  Identities=36%  Similarity=0.558  Sum_probs=176.1

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV  152 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv  152 (408)
                      +.+.+ +..+.|.+.+..+++.+.+.++++.++.+.- |...  .......+|.++.|.+..+|+....++.        
T Consensus        11 ~~~~~-~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~--------   78 (332)
T cd08259          11 KPLQI-EEVPDPEPGPGEVLIKVKAAGVCYRDLLFWK-GFFP--RGKYPLILGHEIVGTVEEVGEGVERFKP--------   78 (332)
T ss_pred             CceEE-EEccCCCCCCCeEEEEEEEEecchhhhHHhc-CCCC--CCCCCeeccccceEEEEEECCCCccCCC--------
Confidence            44555 4556677777888888889988877665531 1110  1122356788999999988864332333        


Q ss_pred             EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                                                                                                      
T Consensus        79 --------------------------------------------------------------------------------   78 (332)
T cd08259          79 --------------------------------------------------------------------------------   78 (332)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      +|+|+.....+|+.|..|..+.+++|.+...++. ...|+|++|+.++.+.++++|+++++++++.++ ...++++++..
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~  157 (332)
T cd08259          79 GDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGE-EVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR  157 (332)
T ss_pred             CCEEEECCCCCCcCChhhhCCCcccCCCcccccc-ccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH
Confidence            8899888888899999999999999998755553 357999999999999999999999988887766 67778888866


Q ss_pred             cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         312 AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       312 ~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      ..++++++++|+|+ |++|+.++++++..|++ ++.+++++++.+.++++|++.+++..      +..+.+.+..   ++
T Consensus       158 ~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~  227 (332)
T cd08259         158 AGVKKGDTVLVTGAGGGVGIHAIQLAKALGAR-VIAVTRSPEKLKILKELGADYVIDGS------KFSEDVKKLG---GA  227 (332)
T ss_pred             hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCcEEEecH------HHHHHHHhcc---CC
Confidence            78899999999998 99999999999999998 78788888888888889988877542      2444555443   79


Q ss_pred             ceEEEcccchh
Q psy1413         391 DKTIDCSGIES  401 (408)
Q Consensus       391 d~i~d~~g~~~  401 (408)
                      |++||++|+..
T Consensus       228 d~v~~~~g~~~  238 (332)
T cd08259         228 DVVIELVGSPT  238 (332)
T ss_pred             CEEEECCChHH
Confidence            99999998754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.74  E-value=1.2e-17  Score=159.11  Aligned_cols=216  Identities=21%  Similarity=0.226  Sum_probs=152.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP----------------------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~----------------------   58 (408)
                      +.++|+|++|++.+. |.++.  ..+|.++|||++|+|+++|+++.++++||+|.+.+                      
T Consensus        36 v~~~~i~~~d~~~~~-g~~~~--~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (329)
T cd08298          36 VEACGVCRTDLHIVE-GDLPP--PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNA  112 (329)
T ss_pred             EEEEeccHHHHHHHh-CCCCC--CCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCc
Confidence            458999999999884 43221  35688999999999999999999999999997632                      


Q ss_pred             ------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          59 ------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        59 ------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                  ++...+...++..|+++++.+.+.++.++.+++.+. ....+ .+++++|+|+|++|++++++++..|
T Consensus       113 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g  191 (329)
T cd08298         113 RFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQG  191 (329)
T ss_pred             cccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCC
Confidence                        112333344555666666655555555555554332 22222 4788999999999999988888777


Q ss_pred             Ccc--------------------------------eeEEEccCch---HHHHhhccCCcEEEEEccCCC-CcccCHHHHH
Q psy1413         126 HEA--------------------------------SGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQ-DVKIPLVLTM  169 (408)
Q Consensus       126 ~~~--------------------------------~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~  169 (408)
                      .+.                                +.+++..+..   .+.+++++++|+++.+|.... ...+++.. +
T Consensus       192 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~  270 (329)
T cd08298         192 AEVFAFTRSGEHQELARELGADWAGDSDDLPPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-L  270 (329)
T ss_pred             CeEEEEcCChHHHHHHHHhCCcEEeccCccCCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-h
Confidence            632                                2233322221   267899999999999986432 22333333 5


Q ss_pred             hcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         170 TKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       170 ~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                      .++..+.+..... ..+++++++++++.+++   +++.|+++++++||+.+.+++.
T Consensus       271 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~  323 (329)
T cd08298         271 WGEKTIRSVANLTRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRI  323 (329)
T ss_pred             hCceEEEEecCCCHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCC
Confidence            6788888887665 67899999999998865   3689999999999999987643

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.74  E-value=8.3e-17  Score=152.45  Aligned_cols=127  Identities=31%  Similarity=0.412  Sum_probs=107.8

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI  346 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~  346 (408)
                      .|++++|...+++.++++|++++.++++.++ +..++++.+. ...++++++++|+|+ |++|+.++++++.+|++ |++
T Consensus        96 ~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~-v~~  174 (325)
T cd08253          96 QGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGAR-VIA  174 (325)
T ss_pred             CcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEE
Confidence            3567788888888999999999988877766 6777888874 478899999999998 99999999999999987 888


Q ss_pred             EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      +++++++.+.++++|++.+++...    .+..+.+.+++.++++|.++||+|+..
T Consensus       175 ~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~~~~~  225 (325)
T cd08253         175 TASSAEGAELVRQAGADAVFNYRA----EDLADRILAATAGQGVDVIIEVLANVN  225 (325)
T ss_pred             EeCCHHHHHHHHHcCCCEEEeCCC----cCHHHHHHHHcCCCceEEEEECCchHH
Confidence            888899999898899999988765    556666777777778999999998754

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.74  E-value=5.5e-17  Score=153.07  Aligned_cols=232  Identities=37%  Similarity=0.678  Sum_probs=176.1

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ +..+.|.+....+++.+...+++..++.+.- |...  ........|.++.|++..+|+....++.         
T Consensus        13 ~~~~-~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~-g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~---------   79 (306)
T cd08258          13 NVEL-REVPEPEPGPGEVLIKVAAAGICGSDLHIYK-GDYD--PVETPVVLGHEFSGTIVEVGPDVEGWKV---------   79 (306)
T ss_pred             ceEE-eecCCCCCCCCeEEEEEEEEEechhhHHHHc-CCCC--cCCCCeeeccceEEEEEEECCCcCcCCC---------
Confidence            4556 5667777777888888888888766654421 1110  0122345788999999999865433333         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        80 -------------------------------------------------------------------------------G   80 (306)
T cd08258          80 -------------------------------------------------------------------------------G   80 (306)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           7


Q ss_pred             CceeecCC-CcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhh-hc
Q psy1413         234 DRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHAC-RR  311 (408)
Q Consensus       234 ~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~-~~  311 (408)
                      |+|...+. .+|+.|..|..+..+.|.....++. ...|+|++|+.++++.++++|+++++++++...+..++++++ ..
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~a~~~l~~~  159 (306)
T cd08258          81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGT-QADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAVAER  159 (306)
T ss_pred             CEEEEccCcCCCCCCcchhCcCcccCCCCceeee-cCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHHHHHHHHHh
Confidence            88877664 5799999999999999987544432 346999999999999999999999988887555778888887 55


Q ss_pred             cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEE--ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT--DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~--~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      ..+++++++||.|+|++|++++|+++.+|++ |+.+  ++++++.+.++++|++.+ +++.    .+..+.+.+.+.+++
T Consensus       160 ~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~~~----~~~~~~l~~~~~~~~  233 (306)
T cd08258         160 SGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NGGE----EDLAELVNEITDGDG  233 (306)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CCCc----CCHHHHHHHHcCCCC
Confidence            7788999999976699999999999999998 6665  334567788889999888 7765    667777777777789


Q ss_pred             CceEEEcccchhhhh
Q psy1413         390 PDKTIDCSGIESTIK  404 (408)
Q Consensus       390 ~d~i~d~~g~~~~~~  404 (408)
                      +|.+|||+|+.....
T Consensus       234 vd~vld~~g~~~~~~  248 (306)
T cd08258         234 ADVVIECSGAVPALE  248 (306)
T ss_pred             CCEEEECCCChHHHH
Confidence            999999998654443

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.74  E-value=8e-18  Score=156.42  Aligned_cols=208  Identities=21%  Similarity=0.192  Sum_probs=150.9

Q ss_pred             CCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---CcccccCCcceeccceeeecccccCCCCCCcceEEEEe
Q psy1413          20 GDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMH   96 (408)
Q Consensus        20 ~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~   96 (408)
                      |..+.++|.++|||++|+|+++|++++++++||||+...   ++...+...++..|+++++++.+.+ ....+++.... 
T Consensus        14 ~~~~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-   91 (277)
T cd08255          14 GTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVR-   91 (277)
T ss_pred             cCccCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-
Confidence            456778999999999999999999999999999998754   4556666778888888887554444 34434332211 


Q ss_pred             eeee-cCCeEEEEccCccccccccccccccCc------------------------------------ceeEEEccCch-
Q psy1413          97 CVGI-CGSDVHYLTHGQIGDFRLSDPMIVGHE------------------------------------ASGIVSKVGAK-  138 (408)
Q Consensus        97 ~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~~------------------------------------~~~vv~~~g~~-  138 (408)
                      ...+ .+++++|+|+|.+|++++++++.+|..                                    ++.++++++.. 
T Consensus        92 ~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~vl~~~~~~~  171 (277)
T cd08255          92 DAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEIGGRGADVVIEASGSPS  171 (277)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchhhhcCCCCCEEEEccCChH
Confidence            1222 478899999999999998888877754                                    22334443432 


Q ss_pred             --HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecC-------------CCcHHHHHHHHHcCCCCCCCce
Q psy1413         139 --VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY-------------ANDYPIALAMVASGKVDVKKLI  203 (408)
Q Consensus       139 --~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~-------------~~~~~~~~~l~~~g~~~~~~~i  203 (408)
                        ...+++++++|+++.+|............+..+.+++.+....             .+.+++++++++++++.  +++
T Consensus       172 ~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~  249 (277)
T cd08255         172 ALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE--ALI  249 (277)
T ss_pred             HHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcc--ccc
Confidence              1578999999999999976554212223456677777765422             14589999999999864  457


Q ss_pred             eeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         204 THNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       204 ~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      .+.|+++++++||+.+.+++...+|+++
T Consensus       250 ~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         250 THRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             cCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            8999999999999999988777777753

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.73  E-value=9.4e-17  Score=154.33  Aligned_cols=121  Identities=26%  Similarity=0.338  Sum_probs=95.5

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcC----CCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVT----LGSKVLITGA-GPIGLVTLLTARALGASR  343 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~----~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~  343 (408)
                      |+|++|..++++.++++|++++.+.++.++ ...++++++. ...+.    ++++++|+|+ |++|+.++++++.+|++ 
T Consensus       111 g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-  189 (350)
T cd08248         111 GTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAH-  189 (350)
T ss_pred             ccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCe-
Confidence            567788899999999999999988887776 5667787763 34444    4999999998 99999999999999997 


Q ss_pred             EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ++.+.++ ++.+.++++|++.+++..+    .+..+.+.   ..+++|.+||++|+.
T Consensus       190 v~~~~~~-~~~~~~~~~g~~~~~~~~~----~~~~~~l~---~~~~vd~vi~~~g~~  238 (350)
T cd08248         190 VTTTCST-DAIPLVKSLGADDVIDYNN----EDFEEELT---ERGKFDVILDTVGGD  238 (350)
T ss_pred             EEEEeCc-chHHHHHHhCCceEEECCC----hhHHHHHH---hcCCCCEEEECCChH
Confidence            6666654 5777888899999988765    33444333   346899999999976

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.73  E-value=1e-16  Score=151.86  Aligned_cols=124  Identities=26%  Similarity=0.328  Sum_probs=103.7

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc-cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR-AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI  346 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~-~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~  346 (408)
                      +|+|++|..++++.++++|+++++++++.++ +..++++++.. ..++++++++|+|+ |++|+.++|+++.+|++ |+.
T Consensus        94 ~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~-v~~  172 (320)
T cd08243          94 DGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGAT-VTA  172 (320)
T ss_pred             CcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCE-EEE
Confidence            4778899999999999999999988777666 67788888743 56889999999998 99999999999999998 888


Q ss_pred             EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      +.+++++.+.++++|++.+++. .    .+..+.+++.  ++++|.++||+|+..
T Consensus       173 ~~~~~~~~~~~~~~g~~~~~~~-~----~~~~~~i~~~--~~~~d~vl~~~~~~~  220 (320)
T cd08243         173 TTRSPERAALLKELGADEVVID-D----GAIAEQLRAA--PGGFDKVLELVGTAT  220 (320)
T ss_pred             EeCCHHHHHHHHhcCCcEEEec-C----ccHHHHHHHh--CCCceEEEECCChHH
Confidence            8888999999999999888754 3    3455556666  578999999999743

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.72  E-value=3e-17  Score=156.45  Aligned_cols=225  Identities=24%  Similarity=0.306  Sum_probs=155.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |+++++|++|++.+. |.+.  ...+|.++|||++|+|+++|++++.+++||+|+....                     
T Consensus        32 v~~~~i~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (332)
T cd08259          32 VKAAGVCYRDLLFWK-GFFP--RGKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA  108 (332)
T ss_pred             EEEEecchhhhHHhc-CCCC--CCCCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCcc
Confidence            468999999999884 4322  2356889999999999999999999999999987641                     


Q ss_pred             ------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEc-cCccccccccccccccC
Q psy1413          60 ------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLT-HGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        60 ------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g-~G~vG~~~i~~a~~~G~  126 (408)
                                  +...+...++..|+++++++.+.++....+++......--..+++++|+| .|.+|+++++.++..|.
T Consensus       109 ~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~  188 (332)
T cd08259         109 EYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA  188 (332)
T ss_pred             ccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence                        12233344555566666544444444433333221111112467899988 58999998888877765


Q ss_pred             c-------------------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-cccCHH
Q psy1413         127 E-------------------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-VKIPLV  166 (408)
Q Consensus       127 ~-------------------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~~~~~~  166 (408)
                      .                                     .+.+++++|...  +.+++++++|+++.+|..... ..++..
T Consensus       189 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~  268 (332)
T cd08259         189 RVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLGGADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPG  268 (332)
T ss_pred             eEEEEeCCHHHHHHHHHcCCcEEEecHHHHHHHHhccCCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHH
Confidence            3                                     223344444321  568899999999999965432 223444


Q ss_pred             HHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         167 LTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       167 ~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      ...+++..+.+..... .++++++++++++.++  +++++.|+++++++||+.+.++.. .+|+++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~-~~kvv~  331 (332)
T cd08259         269 LLILKEIRIIGSISATKADVEEALKLVKEGKIK--PVIDRVVSLEDINEALEDLKSGKV-VGRIVL  331 (332)
T ss_pred             HHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCc--cceeEEEcHHHHHHHHHHHHcCCc-ccEEEe
Confidence            4557888888876554 7789999999999875  458899999999999999997653 345554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.72  E-value=1.6e-16  Score=152.85  Aligned_cols=132  Identities=23%  Similarity=0.270  Sum_probs=100.2

Q ss_pred             CccceeEEeeccc----eeeeCCCCCCcccccccc-hhhhhhhhhhcc--CcCCCCEEEEEec-chhHHHHHHHHHHhCC
Q psy1413         270 HGNLSRYYRHAAD----FCHKLPDHVSLEEGALLE-PLSVGVHACRRA--GVTLGSKVLITGA-GPIGLVTLLTARALGA  341 (408)
Q Consensus       270 ~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~--~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga  341 (408)
                      .|+|++|+.+++.    .++++|++++.++++.++ ...++++++...  .++++++++|+|+ |++|+.++|+|+.+|.
T Consensus        98 ~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~  177 (352)
T cd08247          98 QGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYN  177 (352)
T ss_pred             CceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCC
Confidence            4678889998887    789999999998888776 566788887554  5899999999999 8999999999998754


Q ss_pred             -CeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         342 -SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       342 -~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                       ++++.+. ++++.+.++++|++.+++.++..+.+...+.++..++++++|.+|||+|+...
T Consensus       178 ~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~  238 (352)
T cd08247         178 IGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDL  238 (352)
T ss_pred             cceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHH
Confidence             4577665 45556677889999999876521100234444444446789999999998544

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.72  E-value=7.1e-17  Score=153.88  Aligned_cols=157  Identities=27%  Similarity=0.365  Sum_probs=131.2

Q ss_pred             cCceeecCC-CcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh
Q psy1413         233 CDRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR  310 (408)
Q Consensus       233 ~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~  310 (408)
                      +++|...+. .+|+.|..|..+.+++|+...+.+.. .+|+|++|+.++.+.++++|++++..+++.+. .+.++++++.
T Consensus        83 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~  161 (329)
T cd08298          83 GDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYT-VDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRALK  161 (329)
T ss_pred             CCEEEEeccCCCCCCChhHhCcChhhCCCccccccc-cCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHHH
Confidence            788866543 68899999999999999987766653 47899999999999999999999988877665 6778888887


Q ss_pred             ccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         311 RAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       311 ~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      ...++++++++|+|+|++|+.++++++.+|++ |+.+++++++.+.++++|++.+++.+.    .          .++++
T Consensus       162 ~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~----~----------~~~~v  226 (329)
T cd08298         162 LAGLKPGQRLGLYGFGASAHLALQIARYQGAE-VFAFTRSGEHQELARELGADWAGDSDD----L----------PPEPL  226 (329)
T ss_pred             hhCCCCCCEEEEECCcHHHHHHHHHHHHCCCe-EEEEcCChHHHHHHHHhCCcEEeccCc----c----------CCCcc
Confidence            78899999999998899999999999999986 888888899999999999988887654    1          24579


Q ss_pred             ceEEEcccchhhhhh
Q psy1413         391 DKTIDCSGIESTIKL  405 (408)
Q Consensus       391 d~i~d~~g~~~~~~~  405 (408)
                      |.++++++.....+.
T Consensus       227 D~vi~~~~~~~~~~~  241 (329)
T cd08298         227 DAAIIFAPVGALVPA  241 (329)
T ss_pred             cEEEEcCCcHHHHHH
Confidence            999998765544443

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.72  E-value=1.8e-16  Score=151.40  Aligned_cols=128  Identities=22%  Similarity=0.301  Sum_probs=102.5

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCC-----CCEEEEEec-chhHHHHHHHHHHhC-
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTL-----GSKVLITGA-GPIGLVTLLTARALG-  340 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~-----~~~~lv~G~-G~~G~~~~~~~~~~G-  340 (408)
                      +|+|++|..++.+.+.++|++++.++++.++ ...++++++ ....+++     +++++|+|+ |++|+.++|+++.+| 
T Consensus        96 ~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~  175 (336)
T cd08252          96 PGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTG  175 (336)
T ss_pred             CccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Confidence            4678899999999999999999988877666 455677765 4566666     999999997 999999999999999 


Q ss_pred             CCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413         341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       341 a~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~  404 (408)
                      ++ ++.+++++++.+.++++|++.+++.+.     +..+.++.. .++++|.+|||+|+...+.
T Consensus       176 ~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~~i~~~-~~~~~d~vl~~~~~~~~~~  232 (336)
T cd08252         176 LT-VIATASRPESIAWVKELGADHVINHHQ-----DLAEQLEAL-GIEPVDYIFCLTDTDQHWD  232 (336)
T ss_pred             cE-EEEEcCChhhHHHHHhcCCcEEEeCCc-----cHHHHHHhh-CCCCCCEEEEccCcHHHHH
Confidence            65 888888889999999999999988653     244445544 3468999999998654443

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.72  E-value=2.5e-16  Score=148.96  Aligned_cols=126  Identities=28%  Similarity=0.389  Sum_probs=105.5

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |+|++|..++++.++++|+++++.+++.+. +..++++++ ....++++++++|+|+ |++|+.++++++.+|++ ++++
T Consensus        92 g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~-v~~~  170 (323)
T cd05276          92 GGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGAR-VIAT  170 (323)
T ss_pred             CceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCE-EEEE
Confidence            346677778888899999999887777665 677788876 4467889999999998 99999999999999998 8888


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      ++++++.+.++++|++.+++...    .+..+.+.+.+.++++|.+||++|+..
T Consensus       171 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (323)
T cd05276         171 AGSEEKLEACRALGADVAINYRT----EDFAEEVKEATGGRGVDVILDMVGGDY  220 (323)
T ss_pred             cCCHHHHHHHHHcCCCEEEeCCc----hhHHHHHHHHhCCCCeEEEEECCchHH
Confidence            88888898888899988888766    567777777777778999999999765

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.71  E-value=1.3e-16  Score=152.21  Aligned_cols=228  Identities=29%  Similarity=0.431  Sum_probs=171.7

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ +..+.|...+..+.+.+...+++..++.+.- |...  ...+....|.++.|++..+|+..+.++.         
T Consensus        11 ~~~~-~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~-g~~~--~~~~p~~~g~e~~G~v~~~g~~~~~~~~---------   77 (330)
T cd08245          11 PLEP-EEVPVPEPGPGEVLIKIEACGVCHTDLHAAE-GDWG--GSKYPLVPGHEIVGEVVEVGAGVEGRKV---------   77 (330)
T ss_pred             CceE-EeccCCCCCCCeEEEEEEEEeccHHHHHHHc-CCCC--CCCCCcccCccceEEEEEECCCCccccc---------
Confidence            3444 4456666666777888888888766554431 1111  1123456789999999998864333333         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        78 -------------------------------------------------------------------------------G   78 (330)
T cd08245          78 -------------------------------------------------------------------------------G   78 (330)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecCC-CcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         234 DRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       234 ~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      ++|++.+. .+|+.|.+|..+..+.|.+..+.+.. .+|+|++|+.++++.+.++|+++++++++.+. ...++++++..
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~  157 (330)
T cd08245          79 DRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYT-TQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD  157 (330)
T ss_pred             CEEEEccccCCCCCChhhhCcCcccCcCccccCcc-cCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh
Confidence            88877554 57999999999999999997665542 46899999999999999999999988887665 56677877766


Q ss_pred             cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ..++++++++|+|+|++|++++++++.+|++ |+.+++++++.+.++++|++.+++.+.    .+....    . .+++|
T Consensus       158 ~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~----~-~~~~d  227 (330)
T cd08245         158 AGPRPGERVAVLGIGGLGHLAVQYARAMGFE-TVAITRSPDKRELARKLGADEVVDSGA----ELDEQA----A-AGGAD  227 (330)
T ss_pred             hCCCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhCCcEEeccCC----cchHHh----c-cCCCC
Confidence            7889999999998788999999999999997 888889999999999999999987654    221111    2 25799


Q ss_pred             eEEEcccchhhhh
Q psy1413         392 KTIDCSGIESTIK  404 (408)
Q Consensus       392 ~i~d~~g~~~~~~  404 (408)
                      ++|||++......
T Consensus       228 ~vi~~~~~~~~~~  240 (330)
T cd08245         228 VILVTVVSGAAAE  240 (330)
T ss_pred             EEEECCCcHHHHH
Confidence            9999988655443

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.71  E-value=2.4e-16  Score=149.81  Aligned_cols=124  Identities=27%  Similarity=0.303  Sum_probs=99.0

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh---hccCcCCCC-EEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC---RRAGVTLGS-KVLITGA-GPIGLVTLLTARALGASR  343 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~---~~~~~~~~~-~~lv~G~-G~~G~~~~~~~~~~Ga~~  343 (408)
                      +|+|++|..++++.++++|++++.++++.++ ...++++++   .+..+.+++ +++|+|+ |++|+.++|+|+.+|++ 
T Consensus        94 ~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~-  172 (323)
T TIGR02823        94 DGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE-  172 (323)
T ss_pred             CccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe-
Confidence            4778999999999999999999998888776 455565554   334478888 9999998 99999999999999998 


Q ss_pred             EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      ++++.+++++.+.++++|++.+++.++    .+.  .++..+.+ ++|.++||+|+..
T Consensus       173 vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~--~~~~~~~~-~~d~vld~~g~~~  223 (323)
T TIGR02823       173 VVASTGKAEEEDYLKELGASEVIDRED----LSP--PGKPLEKE-RWAGAVDTVGGHT  223 (323)
T ss_pred             EEEEeCCHHHHHHHHhcCCcEEEcccc----HHH--HHHHhcCC-CceEEEECccHHH
Confidence            676777778888899999999988654    222  34445443 5999999998653

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=99.70  E-value=2.7e-16  Score=149.62  Aligned_cols=126  Identities=21%  Similarity=0.193  Sum_probs=105.2

Q ss_pred             ccceeEEeeccceeeeC----CCCCCcccc-cccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCC
Q psy1413         271 GNLSRYYRHAADFCHKL----PDHVSLEEG-ALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGAS  342 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~----p~~~~~~~a-a~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~  342 (408)
                      ++|++|..++.+.+.++    |++++++++ +.++ +..|+|+++ +...+++++++||+|+ |++|++++|+++.+|++
T Consensus        86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~  165 (325)
T TIGR02825        86 PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCK  165 (325)
T ss_pred             cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCE
Confidence            36889999998887777    888998876 4454 678899887 6678899999999998 99999999999999997


Q ss_pred             eEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       343 ~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                       ++++++++++.+.++++|++.++++++.   ++..+.+++.+ ++++|++||++|+..
T Consensus       166 -Vi~~~~s~~~~~~~~~lGa~~vi~~~~~---~~~~~~~~~~~-~~gvdvv~d~~G~~~  219 (325)
T TIGR02825       166 -VVGAAGSDEKVAYLKKLGFDVAFNYKTV---KSLEETLKKAS-PDGYDCYFDNVGGEF  219 (325)
T ss_pred             -EEEEeCCHHHHHHHHHcCCCEEEecccc---ccHHHHHHHhC-CCCeEEEEECCCHHH
Confidence             8888899999999999999999998752   24556666665 468999999999764

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=99.70  E-value=4.1e-16  Score=148.51  Aligned_cols=125  Identities=22%  Similarity=0.170  Sum_probs=106.5

Q ss_pred             ccceeEEeeccc---eeeeCCCCCC--c----ccccccchhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHh
Q psy1413         271 GNLSRYYRHAAD---FCHKLPDHVS--L----EEGALLEPLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARAL  339 (408)
Q Consensus       271 g~~~~~~~~~~~---~~~~~p~~~~--~----~~aa~~~~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~  339 (408)
                      ++|++|..++++   .++++|++++  .    ..++...+..|+|+++ ....+++++++||+|+ |++|++++|+|+.+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~  167 (329)
T cd08294          88 FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIK  167 (329)
T ss_pred             CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHc
Confidence            468899999999   9999999987  2    2232334778899987 5678899999999998 99999999999999


Q ss_pred             CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         340 GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       340 Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      |++ |+++++++++.+.++++|+++++++++    +++.+.+++.++ +++|++||++|+..
T Consensus       168 G~~-vi~~~~s~~~~~~l~~~Ga~~vi~~~~----~~~~~~v~~~~~-~gvd~vld~~g~~~  223 (329)
T cd08294         168 GCK-VIGCAGSDDKVAWLKELGFDAVFNYKT----VSLEEALKEAAP-DGIDCYFDNVGGEF  223 (329)
T ss_pred             CCE-EEEEeCCHHHHHHHHHcCCCEEEeCCC----ccHHHHHHHHCC-CCcEEEEECCCHHH
Confidence            997 888889999999999999999999877    667777877775 68999999999743

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.70  E-value=3.4e-16  Score=150.49  Aligned_cols=152  Identities=26%  Similarity=0.309  Sum_probs=116.6

Q ss_pred             cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      +|+|+..+..+|+.|..|.        ....++. ..+|+|++|..++++.++++|++++.++++.++ ...++++++..
T Consensus       102 Gd~V~~~~~~~~~~~~~~~--------~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~~~  172 (350)
T cd08274         102 GERVLVDPSIRDPPEDDPA--------DIDYIGS-ERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLER  172 (350)
T ss_pred             CCEEEEecCcCCCCccccc--------cccccCC-CCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHHhh
Confidence            7888776655666554432        1222332 246999999999999999999999988877666 67778888877


Q ss_pred             cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         312 AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       312 ~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      ..++++++++|+|+ |++|+.++|+++.+|++ ++.+++++ +.+.++++|++.+++..+    ....+  ...+.++++
T Consensus       173 ~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~~~----~~~~~--~~~~~~~~~  244 (350)
T cd08274         173 AGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILRDA----PLLAD--AKALGGEPV  244 (350)
T ss_pred             cCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeCCC----ccHHH--HHhhCCCCC
Confidence            78899999999999 99999999999999998 67676655 788889999986665443    33333  455667899


Q ss_pred             ceEEEcccchh
Q psy1413         391 DKTIDCSGIES  401 (408)
Q Consensus       391 d~i~d~~g~~~  401 (408)
                      |++|||+|+..
T Consensus       245 d~vi~~~g~~~  255 (350)
T cd08274         245 DVVADVVGGPL  255 (350)
T ss_pred             cEEEecCCHHH
Confidence            99999999753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.70  E-value=6.7e-17  Score=154.12  Aligned_cols=217  Identities=24%  Similarity=0.302  Sum_probs=151.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP----------------------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~----------------------   58 (408)
                      +.++++|++|++.+. +...  ...+|.++|||++|+|+++|++++++++||+|++.+                      
T Consensus        31 v~~~~i~~~d~~~~~-g~~~--~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (330)
T cd08245          31 IEACGVCHTDLHAAE-GDWG--GSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKA  107 (330)
T ss_pred             EEEEeccHHHHHHHc-CCCC--CCCCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCc
Confidence            468999999999884 3222  235688999999999999999999999999998532                      


Q ss_pred             ------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          59 ------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        59 ------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                  ++...+...++..|+++++.+.+.++....+++.+... ..+ .+++++|+|+|.+|++++++++.+|
T Consensus       108 ~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G  186 (330)
T cd08245         108 VNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMG  186 (330)
T ss_pred             cccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCC
Confidence                        11122233444556665554444344443333321111 222 4678999998889999888887766


Q ss_pred             Cc-------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCC-cccC
Q psy1413         126 HE-------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQD-VKIP  164 (408)
Q Consensus       126 ~~-------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~-~~~~  164 (408)
                      .+                                     ++.++++++..   .+.+++++++|+++.+|..... ..++
T Consensus       187 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~  266 (330)
T cd08245         187 FETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPD  266 (330)
T ss_pred             CEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccc
Confidence            52                                     23344443322   2678999999999999975433 2333


Q ss_pred             HHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         165 LVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       165 ~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                      ...++.++.++.+..... ..++++++++.++.+++   ..+.|++++++++|+.+.+++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~  324 (330)
T cd08245         267 IFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDV  324 (330)
T ss_pred             hHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCC
Confidence            456788999998887765 77899999999999874   4578999999999999987643

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.70  E-value=4.5e-17  Score=154.80  Aligned_cols=224  Identities=16%  Similarity=0.194  Sum_probs=151.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~   68 (408)
                      |.++|+|++|++.+. |..+ ....+|.++|||++|+|+++  +++.+++||||+...            ++...+.+.+
T Consensus        34 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~  109 (325)
T cd05280          34 VHYSSLNYKDALAAT-GNGG-VTRNYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWV  109 (325)
T ss_pred             EEEeecChHHHHHhc-CCCC-CCCCCCCccCcccEEEEEEe--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhE
Confidence            468999999999884 4322 22346889999999999999  567899999998742            3345666677


Q ss_pred             eeccceeeecccccCCCCCCcceEEE--Eeeeee--cCCeEEEEcc-CccccccccccccccCc----------------
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLE--MHCVGI--CGSDVHYLTH-GQIGDFRLSDPMIVGHE----------------  127 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~--~~~~~~--~g~~vlv~g~-G~vG~~~i~~a~~~G~~----------------  127 (408)
                      +..|+++++.+.+.++..+.+++...  +....+  .+++++|+|+ |.+|++++++++.+|+.                
T Consensus       110 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  189 (325)
T cd05280         110 VPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKS  189 (325)
T ss_pred             EECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            88888888755555554443433211  111122  2468999985 99999999998887763                


Q ss_pred             ------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeec
Q psy1413         128 ------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFR  180 (408)
Q Consensus       128 ------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~  180 (408)
                                              ++.++++++...  +.+++++++|+++.+|.... +..++...++.+++++.+...
T Consensus       190 ~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (325)
T cd05280         190 LGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDS  269 (325)
T ss_pred             cCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEe
Confidence                                    123333333221  57899999999999997643 345566666689999998764


Q ss_pred             CC---CcH----HHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         181 YA---NDY----PIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       181 ~~---~~~----~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      ..   +..    +.+++++..+   ..+.+.++|+++|++++++.+.+++ ..+|++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~  324 (325)
T cd05280         270 VNCPMELRKQVWQKLATEWKPD---LLEIVVREISLEELPEAIDRLLAGK-HRGRTVVK  324 (325)
T ss_pred             ecCchhHHHHHHHHHHHHHhcC---CccceeeEecHHHHHHHHHHHhcCC-cceEEEEe
Confidence            32   233    3344444444   2334889999999999999998765 44566653

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=99.70  E-value=4.7e-17  Score=155.05  Aligned_cols=220  Identities=13%  Similarity=0.094  Sum_probs=152.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---CcccccCC---cceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---EFRNVCLS---PILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---~~~~~~~~---~~~~~p~~   74 (408)
                      |+++|||+.|.+.. .     ...++|.++|+|++|+|++   .++.|++||||+...   ++......   .++..|+.
T Consensus        40 v~a~~in~~~~~~~-~-----~~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~iP~~  110 (329)
T cd08294          40 ALFLSVDPYMRPYS-K-----RLNEGDTMIGTQVAKVIES---KNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYKLPAD  110 (329)
T ss_pred             EEEEecCHHHhccc-c-----cCCCCCcEecceEEEEEec---CCCCCCCCCEEEeeCCeeeEEEECCccccceEECCcc
Confidence            46899998875522 1     1124688999999999985   557899999998643   34456666   78888888


Q ss_pred             eee--cc---cccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc--------------------
Q psy1413          75 LRF--RE---QKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE--------------------  127 (408)
Q Consensus        75 ~~~--~~---~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~--------------------  127 (408)
                      +++  ++   .+.++.++.+++.+......+ .+++++|+| +|++|++++|+++.+|+.                    
T Consensus       111 ~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~  190 (329)
T cd08294         111 LPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFD  190 (329)
T ss_pred             ccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence            872  11   123455555554332111222 478899998 799999999999887762                    


Q ss_pred             ---------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC---C----cccCHHHHHhcCcEEEE
Q psy1413         128 ---------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ---D----VKIPLVLTMTKEIDIRG  177 (408)
Q Consensus       128 ---------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~---~----~~~~~~~~~~~~~~l~g  177 (408)
                                           ++.+++++|...  +++++++++|+++.+|....   +    .......++++++++.+
T Consensus       191 ~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  270 (329)
T cd08294         191 AVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEG  270 (329)
T ss_pred             EEEeCCCccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEE
Confidence                                 344455555422  57899999999999985321   1    12334567889999998


Q ss_pred             eecCC------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         178 VFRYA------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       178 ~~~~~------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .+..+      +.+++++++++++++++.+  ..+|+++|+.+|++.+.+++. .+|++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~l~~~~~A~~~~~~~~~-~gkvvv~  328 (329)
T cd08294         271 FIVYRWQDRWPEALKQLLKWIKEGKLKYRE--HVTEGFENMPQAFIGMLKGEN-TGKAIVK  328 (329)
T ss_pred             EEhhhhHHHHHHHHHHHHHHHHCCCCcCCc--ccccCHHHHHHHHHHHHcCCC-CCeEEEe
Confidence            76432      2367889999999998653  456899999999999998764 4666654

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=99.70  E-value=2.5e-16  Score=150.70  Aligned_cols=125  Identities=18%  Similarity=0.188  Sum_probs=105.6

Q ss_pred             ccceeEEeecc-ceeeeCC-CCCCcc-cccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeE
Q psy1413         271 GNLSRYYRHAA-DFCHKLP-DHVSLE-EGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRV  344 (408)
Q Consensus       271 g~~~~~~~~~~-~~~~~~p-~~~~~~-~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~v  344 (408)
                      |+|++|..+++ ..++++| ++++.+ +++.++ ++.|+|+++ ....+++++++||+|+ |++|++++|+|+.+|++ |
T Consensus       101 g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~-V  179 (338)
T cd08295         101 TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCY-V  179 (338)
T ss_pred             CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCE-E
Confidence            68999999999 7899995 567765 566555 678889888 5578999999999999 99999999999999997 8


Q ss_pred             EEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         345 VITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       345 v~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++++++++.+.+++ +|++.++++++.   ++..+.+++.++ +++|++||++|+.
T Consensus       180 i~~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~~~i~~~~~-~gvd~v~d~~g~~  232 (338)
T cd08295         180 VGSAGSDEKVDLLKNKLGFDDAFNYKEE---PDLDAALKRYFP-NGIDIYFDNVGGK  232 (338)
T ss_pred             EEEeCCHHHHHHHHHhcCCceeEEcCCc---ccHHHHHHHhCC-CCcEEEEECCCHH
Confidence            888899999999988 999999997541   366677777774 7899999999974

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.69  E-value=8e-17  Score=153.83  Aligned_cols=227  Identities=22%  Similarity=0.270  Sum_probs=150.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccccc----------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC----------------   64 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~----------------   64 (408)
                      +.++|+|++|++.+. |... ....+|.++|||++|+|+++|++++.+++||+|++.+...+..                
T Consensus        34 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (342)
T cd08266          34 VKAAALNHLDLWVRR-GMPG-IKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYG  111 (342)
T ss_pred             EEeeecCHHHHHHhc-CCCC-CCCCCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhcccccccccccc
Confidence            357899999999884 4321 2245688999999999999999999999999999765322211                


Q ss_pred             -----------------CCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-Ccccccccccccccc
Q psy1413          65 -----------------LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVG  125 (408)
Q Consensus        65 -----------------~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G  125 (408)
                                       ...++..|+.+.+.+.+.++....+++........+ .+++++|+|+ +.+|++++++++..|
T Consensus       112 ~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g  191 (342)
T cd08266         112 ILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFG  191 (342)
T ss_pred             ccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcC
Confidence                             112223333333322222222222221111111112 4678888885 478888877776665


Q ss_pred             Cc------------------------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-C
Q psy1413         126 HE------------------------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-D  160 (408)
Q Consensus       126 ~~------------------------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~  160 (408)
                      +.                                          .+.++++.|...  ..+++++++|+++.+|.... .
T Consensus       192 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~  271 (342)
T cd08266         192 ATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYE  271 (342)
T ss_pred             CEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCC
Confidence            53                                          233333333221  56789999999999996543 3


Q ss_pred             cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         161 VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       161 ~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      ..++....+.+++++.+..... ..+.+++++++++.+++  ++++.|++++++++++.+.+++ ...|++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~-~~~kvv~~  341 (342)
T cd08266         272 APIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESRE-QFGKIVLT  341 (342)
T ss_pred             CCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCC-CCceEEEe
Confidence            4555556678899998887665 67899999999998753  5889999999999999998754 34566654

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.69  E-value=1e-15  Score=145.21  Aligned_cols=125  Identities=30%  Similarity=0.358  Sum_probs=105.6

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI  346 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~  346 (408)
                      .|+|++|..++.+.++++|++++...++.++ ...++++++ +...++++++++|+|+ |++|+.++++++.+|++ ++.
T Consensus        96 ~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~  174 (326)
T cd08272          96 QGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGAR-VYA  174 (326)
T ss_pred             CCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCE-EEE
Confidence            4678889999999999999999987777666 566677776 5678899999999997 99999999999999998 777


Q ss_pred             EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      ++++ ++.+.++++|++.+++...    . ..+.+.+.+.++++|.++||+|+..
T Consensus       175 ~~~~-~~~~~~~~~g~~~~~~~~~----~-~~~~~~~~~~~~~~d~v~~~~~~~~  223 (326)
T cd08272         175 TASS-EKAAFARSLGADPIIYYRE----T-VVEYVAEHTGGRGFDVVFDTVGGET  223 (326)
T ss_pred             Eech-HHHHHHHHcCCCEEEecch----h-HHHHHHHhcCCCCCcEEEECCChHH
Confidence            7777 8888888899988888765    5 6777888887789999999998754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.69  E-value=9.5e-16  Score=145.45  Aligned_cols=126  Identities=29%  Similarity=0.382  Sum_probs=105.7

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |.|++|+.++.+.++++|++++.++++.++ ...++++++ ....+.++++++|+|+ |++|+.++++++..|++ ++.+
T Consensus        97 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~-v~~~  175 (328)
T cd08268          97 GTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGAT-VIAT  175 (328)
T ss_pred             ccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCE-EEEE
Confidence            567788888889999999999987776665 677788876 4567788999999998 99999999999999997 8888


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      +++.++.+.++++|++.+++.+.    .+..+.+.+.+.++++|.+++++|+..
T Consensus       176 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~~~~~  225 (328)
T cd08268         176 TRTSEKRDALLALGAAHVIVTDE----EDLVAEVLRITGGKGVDVVFDPVGGPQ  225 (328)
T ss_pred             cCCHHHHHHHHHcCCCEEEecCC----ccHHHHHHHHhCCCCceEEEECCchHh
Confidence            88888888888899988888765    566677777777778999999998743

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.69  E-value=9.9e-17  Score=153.05  Aligned_cols=226  Identities=20%  Similarity=0.241  Sum_probs=152.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      +.++|+|++|++.. .+.++ ...+.|.++|||++|+|+++|+++.++++||+|.....                     
T Consensus        34 v~~~~i~~~d~~~~-~g~~~-~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (336)
T cd08276          34 VHAVSLNYRDLLIL-NGRYP-PPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPI  111 (336)
T ss_pred             EEEEecCHHHHHHh-cCCCC-CCCCCCcccccceeEEEEEeCCCCcCCCCCCEEEEeccccccccccccccccccccccc
Confidence            35899999999987 34322 22346889999999999999999999999999987541                     


Q ss_pred             ------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccccCcc----
Q psy1413          60 ------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIVGHEA----  128 (408)
Q Consensus        60 ------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~G~~~----  128 (408)
                            +.......++..|+++++.+.+.++....+++........ ..++.++|.|.|++|++++++++..|+..    
T Consensus       112 ~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~  191 (336)
T cd08276         112 DGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATS  191 (336)
T ss_pred             CceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEe
Confidence                  1122223344445554443333333332222211111111 14678888888899998888888777632    


Q ss_pred             ---------------------------------------eeEEEccCch--HHHHhhccCCcEEEEEccCCCC-cccCHH
Q psy1413         129 ---------------------------------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQD-VKIPLV  166 (408)
Q Consensus       129 ---------------------------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~~-~~~~~~  166 (408)
                                                             +.++++++..  ..++++++++|+++.+|..... ...+..
T Consensus       192 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  271 (336)
T cd08276         192 SSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLL  271 (336)
T ss_pred             CCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHH
Confidence                                                   1222222211  1568899999999999976543 345666


Q ss_pred             HHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         167 LTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       167 ~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      .++.+++++.+..... ..+++++++++++.+.+  .+++.|++++++++|+.+.+++. ..|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~~kvv~  334 (336)
T cd08276         272 PLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRP--VIDRVFPFEEAKEAYRYLESGSH-FGKVVI  334 (336)
T ss_pred             HHhhcceEEEEEecCcHHHHHHHHHHHHcCCccc--ccCcEEeHHHHHHHHHHHHhCCC-CceEEE
Confidence            7789999999987655 67899999999887754  36789999999999999887643 445554

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.69  E-value=6.5e-16  Score=145.95  Aligned_cols=129  Identities=33%  Similarity=0.443  Sum_probs=107.7

Q ss_pred             CccceeEEeeccceeeeCCCCCCccccccc-chhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEe
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~-~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      .|+|++|..++++.++++|+++ . .++.. .++.++++++....++++++++|+|+|++|++++|+|+.+|++++++++
T Consensus        84 ~g~~~~~~~v~~~~~~~lP~~~-~-~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~  161 (312)
T cd08269          84 GGAFAEYDLADADHAVPLPSLL-D-GQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAID  161 (312)
T ss_pred             CCcceeeEEEchhheEECCCch-h-hhHHhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEC
Confidence            5889999999999999999998 2 33333 4666778777777889999999997799999999999999998788888


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~  404 (408)
                      +++++.+.++++|++.+++.+.    .++.+.+.+++.++++|++|||+|+....+
T Consensus       162 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~l~~~~~~~~vd~vld~~g~~~~~~  213 (312)
T cd08269         162 RRPARLALARELGATEVVTDDS----EAIVERVRELTGGAGADVVIEAVGHQWPLD  213 (312)
T ss_pred             CCHHHHHHHHHhCCceEecCCC----cCHHHHHHHHcCCCCCCEEEECCCCHHHHH
Confidence            8888888889999999988665    567777888887789999999998654433

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.68  E-value=7.5e-16  Score=145.83  Aligned_cols=120  Identities=31%  Similarity=0.380  Sum_probs=96.9

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc-cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR-AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~-~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |+|++|...+++.+.++|++++.++++.+. ...++++++.. ..++++++++|+|+ |++|+.++++++.+|++ ++.+
T Consensus        96 g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~-v~~~  174 (319)
T cd08267          96 GALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAH-VTGV  174 (319)
T ss_pred             ceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCE-EEEE
Confidence            457778888888999999999987777665 67778888754 44889999999998 99999999999999996 7777


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccc
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGI  399 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~  399 (408)
                      +++ ++.+.++++|++.+++.+.    .+..   +..+.++++|.++||+|+
T Consensus       175 ~~~-~~~~~~~~~g~~~~~~~~~----~~~~---~~~~~~~~~d~vi~~~~~  218 (319)
T cd08267         175 CST-RNAELVRSLGADEVIDYTT----EDFV---ALTAGGEKYDVIFDAVGN  218 (319)
T ss_pred             eCH-HHHHHHHHcCCCEeecCCC----CCcc---hhccCCCCCcEEEECCCc
Confidence            655 7788889999988887655    2222   445566789999999984

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.66  E-value=3.4e-15  Score=141.49  Aligned_cols=123  Identities=26%  Similarity=0.333  Sum_probs=100.8

Q ss_pred             ceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec
Q psy1413         273 LSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDI  349 (408)
Q Consensus       273 ~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~  349 (408)
                      |++|..++.+.++++|++++..+++.++ ...++++++ ....++++++++|+|+ |++|+.++++++.+|++ ++++.+
T Consensus        94 ~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~-v~~~~~  172 (325)
T TIGR02824        94 YAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGAR-VFTTAG  172 (325)
T ss_pred             ceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCE-EEEEeC
Confidence            4566666777888899999877766555 666777775 5678899999999998 99999999999999997 888888


Q ss_pred             ChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         350 LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       350 ~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ++++.+.++++|++.+++...    .+..+.+++.+.++++|.++||+|+.
T Consensus       173 ~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~~i~~~~~~  219 (325)
T TIGR02824       173 SDEKCAACEALGADIAINYRE----EDFVEVVKAETGGKGVDVILDIVGGS  219 (325)
T ss_pred             CHHHHHHHHHcCCcEEEecCc----hhHHHHHHHHcCCCCeEEEEECCchH
Confidence            888888888899988887765    56667777777667899999999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.66  E-value=3.7e-15  Score=141.41  Aligned_cols=126  Identities=28%  Similarity=0.418  Sum_probs=103.5

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |+|++|..++.+.++++|++++..+++.+. ...++++++ ....++++++++|+|+ |++|+.++++++..|++ ++.+
T Consensus        94 ~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~-v~~~  172 (325)
T cd08271          94 GSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-VITT  172 (325)
T ss_pred             ccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEE
Confidence            457788888888999999999988777665 677778777 4467889999999999 89999999999999998 6655


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      . ++++.+.+.++|++.+++.+.    .+..+.+++.+.++++|.+++|+|+...
T Consensus       173 ~-~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~~~~~~  222 (325)
T cd08271         173 C-SKRNFEYVKSLGADHVIDYND----EDVCERIKEITGGRGVDAVLDTVGGETA  222 (325)
T ss_pred             E-cHHHHHHHHHcCCcEEecCCC----ccHHHHHHHHcCCCCCcEEEECCCcHhH
Confidence            5 667778888899999988765    5566777777777889999999987653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.65  E-value=2.8e-16  Score=148.25  Aligned_cols=191  Identities=26%  Similarity=0.365  Sum_probs=133.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |.++++|++|++... +..  .+..+|.++|+|++|+|+++|++++.+++||+|...+.                     
T Consensus        33 v~~~~l~~~d~~~~~-g~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (306)
T cd08258          33 VAAAGICGSDLHIYK-GDY--DPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHR  109 (306)
T ss_pred             EEEEEechhhHHHHc-CCC--CcCCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCC
Confidence            458999999998874 322  12345789999999999999999999999999987541                     


Q ss_pred             -------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          60 -------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        60 -------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                   +.......++..|+++++. .+.++.+..+++........+ .+++++|.|+|.+|++++++++.+|
T Consensus       110 ~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~-~aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G  188 (306)
T cd08258         110 KGIGTQADGGFAEYVLVPEESLHELPENLSLE-AAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQG  188 (306)
T ss_pred             ceeeecCCCceEEEEEcchHHeEECcCCCCHH-HHHhhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                         1233334556666666663 333333333332211111112 4678888888889988888877766


Q ss_pred             Cc-------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCC-
Q psy1413         126 HE-------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGS-  158 (408)
Q Consensus       126 ~~-------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~-  158 (408)
                      +.                                           ++.+++++|..   .+.+++++++|+++.+|... 
T Consensus       189 ~~v~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  268 (306)
T cd08258         189 ATVVVVGTEKDEVRLDVAKELGADAVNGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP  268 (306)
T ss_pred             CEEEEECCCCCHHHHHHHHHhCCcccCCCcCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC
Confidence            53                                           22333343321   15688999999999999865 


Q ss_pred             CCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcC
Q psy1413         159 QDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASG  195 (408)
Q Consensus       159 ~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g  195 (408)
                      ....+++..+++|++++.|++.++ ++++++++++++|
T Consensus       269 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  306 (306)
T cd08258         269 LAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG  306 (306)
T ss_pred             CCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence            356778888889999999999886 8899999999875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.65  E-value=5e-15  Score=140.12  Aligned_cols=123  Identities=32%  Similarity=0.415  Sum_probs=100.8

Q ss_pred             ceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec
Q psy1413         273 LSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDI  349 (408)
Q Consensus       273 ~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~  349 (408)
                      +++|..++.+.++++|++++..+++... +..++++++. ...++++++++|+|+ |++|+.++++++..|++ ++.+++
T Consensus        94 ~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~  172 (323)
T cd08241          94 FAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGAR-VIAAAS  172 (323)
T ss_pred             eEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCE-EEEEeC
Confidence            4456666667788889888876666444 6677777763 577889999999999 99999999999999998 888888


Q ss_pred             ChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         350 LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       350 ~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +.++.+.++++|++.+++...    .+..+.+.+.+.++++|.++||+|+.
T Consensus       173 ~~~~~~~~~~~g~~~~~~~~~----~~~~~~i~~~~~~~~~d~v~~~~g~~  219 (323)
T cd08241         173 SEEKLALARALGADHVIDYRD----PDLRERVKALTGGRGVDVVYDPVGGD  219 (323)
T ss_pred             CHHHHHHHHHcCCceeeecCC----ccHHHHHHHHcCCCCcEEEEECccHH
Confidence            888899998899988888765    56777788888778899999999874

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=99.64  E-value=2.9e-15  Score=143.80  Aligned_cols=125  Identities=19%  Similarity=0.206  Sum_probs=103.2

Q ss_pred             ccceeEEeeccce--eee--CCCCCCcc-cccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCC
Q psy1413         271 GNLSRYYRHAADF--CHK--LPDHVSLE-EGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGAS  342 (408)
Q Consensus       271 g~~~~~~~~~~~~--~~~--~p~~~~~~-~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~  342 (408)
                      |+|++|..++.+.  +.+  +|++++++ +++.++ ...|+|+++ ....+++++++||+|+ |++|++++|+|+.+|++
T Consensus       106 ~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~  185 (348)
T PLN03154        106 TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCY  185 (348)
T ss_pred             CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCE
Confidence            6799999998753  544  48999875 565555 677888887 4577899999999999 99999999999999997


Q ss_pred             eEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         343 RVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       343 ~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                       |+++++++++.+.++ ++|++.++++++.   +++.+.+++++. +++|++|||+|+.
T Consensus       186 -Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~---~~~~~~i~~~~~-~gvD~v~d~vG~~  239 (348)
T PLN03154        186 -VVGSAGSSQKVDLLKNKLGFDEAFNYKEE---PDLDAALKRYFP-EGIDIYFDNVGGD  239 (348)
T ss_pred             -EEEEcCCHHHHHHHHHhcCCCEEEECCCc---ccHHHHHHHHCC-CCcEEEEECCCHH
Confidence             888888999999887 7999999998641   356777777774 5899999999975

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.64  E-value=3.9e-16  Score=148.75  Aligned_cols=225  Identities=20%  Similarity=0.247  Sum_probs=151.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      |.++|+|++|+..+ .+.... ...+|.++|||++|+|+++|++++.|++||+|....      ++.......++..|++
T Consensus        34 v~~~~i~~~d~~~~-~g~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~  111 (331)
T cd08273          34 VEASGVSFADVQMR-RGLYPD-QPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEG  111 (331)
T ss_pred             EEEEecCHHHHHHh-CCCCCC-CCCCCcccccceEEEEEEeCCCCccCCCCCEEEEeCCCcceeeEEEechHHeEECCCC
Confidence            45899999999987 443221 235788999999999999999999999999998754      2345555677888888


Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCcce-----------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHEAS-----------------------  129 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~~~-----------------------  129 (408)
                      +++++.+.++.+..+++........+ .+++++|+| .|.+|++++++++.+|....                       
T Consensus       112 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~  191 (331)
T cd08273         112 VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTASERNHAALRELGATPIDYRT  191 (331)
T ss_pred             CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCeEEcCCC
Confidence            88855556666655554322111222 478899988 58999999888887765422                       


Q ss_pred             --------------eEEEccCchH--HHHhhccCCcEEEEEccCCCCc--ccCH--H----------HH--HhcCcEEEE
Q psy1413         130 --------------GIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDV--KIPL--V----------LT--MTKEIDIRG  177 (408)
Q Consensus       130 --------------~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~--~~~~--~----------~~--~~~~~~l~g  177 (408)
                                    .+++++++..  .++++++++|+++.+|......  .+++  .          ..  ..++..+.+
T Consensus       192 ~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (331)
T cd08273         192 KDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYY  271 (331)
T ss_pred             cchhhhhccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEe
Confidence                          2223332221  4678999999999999764322  1211  0          11  222333333


Q ss_pred             eecC--------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         178 VFRY--------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       178 ~~~~--------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                      ....        .+.+++++++++++.+++  +++++|++++++++|+.+.+++. .+|++
T Consensus       272 ~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~gkvv  329 (331)
T cd08273         272 VWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKV-VGKIV  329 (331)
T ss_pred             echhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCC-cceEE
Confidence            3221        145788999999998863  57889999999999999987654 34444

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.64  E-value=3.5e-15  Score=140.32  Aligned_cols=120  Identities=28%  Similarity=0.334  Sum_probs=95.2

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc-cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR-AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~-~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |+|++|..++.+.++++|++++...++.++ ...++++++.. ..+.++++++|+|+ |++|++++++++..|++ ++.+
T Consensus        97 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~  175 (309)
T cd05289          97 GAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-VIAT  175 (309)
T ss_pred             CcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEE
Confidence            567788888888899999999887777665 55667777744 44889999999998 99999999999999998 6667


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ++++ +.+.++++|++.+++.+.    .+..+    .+.++++|.+|||+|+.
T Consensus       176 ~~~~-~~~~~~~~g~~~~~~~~~----~~~~~----~~~~~~~d~v~~~~~~~  219 (309)
T cd05289         176 ASAA-NADFLRSLGADEVIDYTK----GDFER----AAAPGGVDAVLDTVGGE  219 (309)
T ss_pred             ecch-hHHHHHHcCCCEEEeCCC----Cchhh----ccCCCCceEEEECCchH
Confidence            6666 788888899988888765    22222    34456899999999876

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.64  E-value=7.7e-15  Score=139.46  Aligned_cols=123  Identities=24%  Similarity=0.260  Sum_probs=97.3

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh---hccCcC-CCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC---RRAGVT-LGSKVLITGA-GPIGLVTLLTARALGASR  343 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~---~~~~~~-~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~  343 (408)
                      .|+|++|..++++.++++|++++.++++.++ ...++++++   ...... ++++++|+|+ |++|+.++|+++.+|++ 
T Consensus        95 ~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~-  173 (324)
T cd08288          95 WGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYE-  173 (324)
T ss_pred             CCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCe-
Confidence            4779999999999999999999988887776 444455443   233444 5789999999 99999999999999997 


Q ss_pred             EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ++.+++++++.+.++++|++.++++++      ....++.++. +++|.+||++|+.
T Consensus       174 vi~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~-~~~~~~~d~~~~~  223 (324)
T cd08288         174 VVASTGRPEEADYLRSLGASEIIDRAE------LSEPGRPLQK-ERWAGAVDTVGGH  223 (324)
T ss_pred             EEEEeCCHHHHHHHHhcCCCEEEEcch------hhHhhhhhcc-CcccEEEECCcHH
Confidence            788888899999999999999998754      1224445543 3589999999973

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>KOG0025|consensus

Probab=99.64  E-value=4.2e-15  Score=131.15  Aligned_cols=208  Identities=21%  Similarity=0.244  Sum_probs=150.5

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +++ ....+|......+++...+..++..++--+- |- --....++..-|.|..+.+.++|+....++.          
T Consensus        35 lql-~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQ-Gv-YpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~----------  101 (354)
T KOG0025|consen   35 LQL-KNLELPAVPGSDVLVKMLAAPINPSDINQIQ-GV-YPVRPELPAVGGNEGVGEVVAVGSNVKGFKP----------  101 (354)
T ss_pred             hee-ecccCCCCCCCceeeeeeecCCChHHhhhhc-cc-cCCCCCCCcccCCcceEEEEEecCCcCccCC----------
Confidence            344 4556666666668888888888877764332 11 1122344556688999999999986555554          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    +|
T Consensus       102 ------------------------------------------------------------------------------Gd  103 (354)
T KOG0025|consen  102 ------------------------------------------------------------------------------GD  103 (354)
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          88


Q ss_pred             ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchh-hhhhhhh-hcc
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPL-SVGVHAC-RRA  312 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~-~~~~~~~-~~~  312 (408)
                      +|.+.+                           ...|+|++|.+++++.++++++.++++.||++..- .|+|..+ ...
T Consensus       104 ~VIp~~---------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv  156 (354)
T KOG0025|consen  104 WVIPLS---------------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFV  156 (354)
T ss_pred             eEeecC---------------------------CCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHH
Confidence            886533                           36799999999999999999999999999999844 4556665 667


Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh----HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK----LKTAKEMGADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~----~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      .++++++++..|+ .++|+.++|+|+++|.+.|-++ |+...    .+.++.+||+++|......+.    +..+.....
T Consensus       157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk~lGA~~ViTeeel~~~----~~~k~~~~~  231 (354)
T KOG0025|consen  157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLKSLGATEVITEEELRDR----KMKKFKGDN  231 (354)
T ss_pred             hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHHHcCCceEecHHHhcch----hhhhhhccC
Confidence            8999999999999 9999999999999999966555 55333    355677999999975332111    112222234


Q ss_pred             CCCceEEEcccchhhhhh
Q psy1413         388 EQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       388 ~~~d~i~d~~g~~~~~~~  405 (408)
                      ..+.+.|||+|+.++...
T Consensus       232 ~~prLalNcVGGksa~~i  249 (354)
T KOG0025|consen  232 PRPRLALNCVGGKSATEI  249 (354)
T ss_pred             CCceEEEeccCchhHHHH
Confidence            578999999999877543

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.61  E-value=2.3e-14  Score=127.77  Aligned_cols=126  Identities=21%  Similarity=0.148  Sum_probs=109.6

Q ss_pred             CccceeEEeeccceeeeCCCCC---Ccccccccchhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHV---SLEEGALLEPLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRV  344 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~---~~~~aa~~~~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~v  344 (408)
                      ..+|++|..++.+.+.++.+..   +.....+-++-.|||.++ +....++++||+|.++ |++|..+.|++|..|+| |
T Consensus       100 ~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~r-V  178 (340)
T COG2130         100 VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCR-V  178 (340)
T ss_pred             cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCe-E
Confidence            3489999999999999998543   223333445777899987 7788999999999999 99999999999999998 9


Q ss_pred             EEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         345 VITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       345 v~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      |.+..+++|.+++++ +|.|.+||++.    +++.+.++++.. +|+|+.||++|++-
T Consensus       179 VGiaGg~eK~~~l~~~lGfD~~idyk~----~d~~~~L~~a~P-~GIDvyfeNVGg~v  231 (340)
T COG2130         179 VGIAGGAEKCDFLTEELGFDAGIDYKA----EDFAQALKEACP-KGIDVYFENVGGEV  231 (340)
T ss_pred             EEecCCHHHHHHHHHhcCCceeeecCc----ccHHHHHHHHCC-CCeEEEEEcCCchH
Confidence            999999999999977 99999999999    799999999984 79999999999863

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.58  E-value=8.1e-14  Score=132.92  Aligned_cols=123  Identities=22%  Similarity=0.269  Sum_probs=96.2

Q ss_pred             cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      +|++|..++.+.++++|+++++++++.++ +..++++++ ....++++++++|+|+ |++|+.++++++.+  ..+.+++
T Consensus        92 ~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~--~~~~~~~  169 (337)
T cd08275          92 GYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV--PNVTVVG  169 (337)
T ss_pred             eeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc--cCcEEEE
Confidence            35567777778899999999988777666 677788886 5577889999999999 99999999999998  2233333


Q ss_pred             -cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         349 -ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       349 -~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                       ..+++.+.++++|++.+++.+.    .+..+.+++.+ ++++|.++||+|+..
T Consensus       170 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~-~~~~d~v~~~~g~~~  218 (337)
T cd08275         170 TASASKHEALKENGVTHVIDYRT----QDYVEEVKKIS-PEGVDIVLDALGGED  218 (337)
T ss_pred             eCCHHHHHHHHHcCCcEEeeCCC----CcHHHHHHHHh-CCCceEEEECCcHHH
Confidence             2355778888899999988766    56667777777 468999999998754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.56  E-value=8.1e-15  Score=139.60  Aligned_cols=219  Identities=16%  Similarity=0.089  Sum_probs=147.8

Q ss_pred             CCeeeecccchhhhhcCCCCC-CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc---cCcccccC-Ccceecccee
Q psy1413           1 MHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV---PEFRNVCL-SPILRRRFSL   75 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~-~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~---~~~~~~~~-~~~~~~p~~~   75 (408)
                      +.++|+|++|..... +.... .+...+.++|+|++|+|+++|++  ++++||||+..   .++...+. +.++..|+++
T Consensus        39 v~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~~~~~~~~~v~~~~~~~~lP~~~  115 (329)
T cd05288          39 TLYLSVDPYMRGWMS-DAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGFLGWQEYAVVDGASGLRKLDPSL  115 (329)
T ss_pred             EEEEecCHHHhhhhc-cCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecccceEEEEEecchhhcEECCccc
Confidence            458999998876542 21111 11223567899999999999964  79999999854   24456666 7888888887


Q ss_pred             e--eccccc-CCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCc-----------------------
Q psy1413          76 R--FREQKP-IEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHE-----------------------  127 (408)
Q Consensus        76 ~--~~~~~~-lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~-----------------------  127 (408)
                      +  +++... ++.+..+++.+...... ..+++++|+| +|.+|++++++++.+|+.                       
T Consensus       116 ~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~  195 (329)
T cd05288         116 GLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAA  195 (329)
T ss_pred             CCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceE
Confidence            4  323333 55554444422111111 2468899998 689999998888877653                       


Q ss_pred             -------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-c-----ccCHHHHHhcCcEEEEeec
Q psy1413         128 -------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-V-----KIPLVLTMTKEIDIRGVFR  180 (408)
Q Consensus       128 -------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~-----~~~~~~~~~~~~~l~g~~~  180 (408)
                                         ++.+++++|...  .++++++++|+++.+|..... .     .++...++.+++++.+...
T Consensus       196 ~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (329)
T cd05288         196 INYKTPDLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIV  275 (329)
T ss_pred             EecCChhHHHHHHHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecc
Confidence                               222333333211  468899999999999965432 1     2345566789999988764


Q ss_pred             CC------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         181 YA------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       181 ~~------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                      ..      +.+.++++++.++.+++.+  .+.++++++.++++.+.+++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~  323 (329)
T cd05288         276 SDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKN  323 (329)
T ss_pred             hhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCC
Confidence            32      3478889999999988664  444899999999999987653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.56  E-value=9.4e-14  Score=132.49  Aligned_cols=157  Identities=26%  Similarity=0.311  Sum_probs=119.9

Q ss_pred             cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-h
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-R  310 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~  310 (408)
                      +++|...+...|      +.+.+..|.....+|. ..+|+|++|..++++.++++|+++++.+++.++ +..++++++ .
T Consensus        82 Gd~V~~~~~~~~------~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~  154 (336)
T cd08276          82 GDRVVPTFFPNW------LDGPPTAEDEASALGG-PIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFG  154 (336)
T ss_pred             CCEEEEeccccc------cccccccccccccccc-ccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHh
Confidence            666655433333      2333344443333332 247899999999999999999999988777766 667788877 3


Q ss_pred             ccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         311 RAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       311 ~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      ...++++++++|+|+|++|+.++++++++|++ ++++++++++.+.++++|++.+++.+..   .+..+.+++.+.++++
T Consensus       155 ~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~  230 (336)
T cd08276         155 LGPLKPGDTVLVQGTGGVSLFALQFAKAAGAR-VIATSSSDEKLERAKALGADHVINYRTT---PDWGEEVLKLTGGRGV  230 (336)
T ss_pred             hcCCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCEEEcCCcc---cCHHHHHHHHcCCCCC
Confidence            46788999999997799999999999999998 8888889999999988999999886541   3455667788877899


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |.+||++|..
T Consensus       231 d~~i~~~~~~  240 (336)
T cd08276         231 DHVVEVGGPG  240 (336)
T ss_pred             cEEEECCChH
Confidence            9999998854

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1198|consensus

Probab=99.54  E-value=8.8e-15  Score=138.47  Aligned_cols=228  Identities=20%  Similarity=0.221  Sum_probs=157.1

Q ss_pred             CeeeecccchhhhhcCCCCCCC--CCCCccccCCccEE---EEEeC-CCCCCCCCCCEEEEc------cCcccccCCcce
Q psy1413           2 HCVGICGSDVHYLTHGQIGDFR--LSDPMIVGHEASGI---VSKVG-AKVKHLKVDNQTRFV------PEFRNVCLSPIL   69 (408)
Q Consensus         2 ~a~gic~sDl~~~~~g~~~~~~--~~~P~i~GhE~~G~---Vv~vG-~~v~~~~vGdrV~~~------~~~~~~~~~~~~   69 (408)
                      .++++|+.|+.+. .|.....+  ..+|.+++.++.|+   +...| ..+..++.||++...      +++...+....+
T Consensus        40 ~a~a~NpiD~~~~-~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~  118 (347)
T KOG1198|consen   40 VAVALNPIDLKIR-NGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLV  118 (347)
T ss_pred             EEeccChHHHHHH-ccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEeeccCCCceeeEEEcchhhcc
Confidence            5788899999988 44433322  36786666666666   34444 334567788887643      356677778889


Q ss_pred             eccceeeecccccCCCCCCcceEEEEeee------ee-cCCeEEEEc-cCccccccccccccccC---------------
Q psy1413          70 RRRFSLRFREQKPIEDPDDHEVLLEMHCV------GI-CGSDVHYLT-HGQIGDFRLSDPMIVGH---------------  126 (408)
Q Consensus        70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~------~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~---------------  126 (408)
                      +.|+++++++++.+|..+.+++.+.....      .. .++.+||+| +|++|++++|+|+..|+               
T Consensus       119 ~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~  198 (347)
T KOG1198|consen  119 KIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELV  198 (347)
T ss_pred             CCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHH
Confidence            99999999888889999888886655555      34 467899986 77999999999998873               


Q ss_pred             --------------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHH---H-H-----
Q psy1413         127 --------------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLV---L-T-----  168 (408)
Q Consensus       127 --------------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~---~-~-----  168 (408)
                                                .++.+++++|...  .++.++..+|+...++...+ ..+.+..   . +     
T Consensus       199 k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  278 (347)
T KOG1198|consen  199 KKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKL  278 (347)
T ss_pred             HHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEeccccccccccccchhhhhhhhh
Confidence                                      3778889988743  56888888887666664332 1111111   0 1     


Q ss_pred             ---HhcCcEEEEe-ecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         169 ---MTKEIDIRGV-FRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       169 ---~~~~~~l~g~-~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                         ..++...... .... +.++.+.++++++++  ++.+.+.||++++.+||+.+.+ +...+|+++..
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gki--kp~i~~~~p~~~~~ea~~~~~~-~~~~GK~vl~~  345 (347)
T KOG1198|consen  279 YSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKI--KPVIDSVYPFSQAKEAFEKLEK-SHATGKVVLEK  345 (347)
T ss_pred             eeeeeeccceeeeeecCCHHHHHHHHHHHHcCcc--cCCcceeeeHHHHHHHHHHHhh-cCCcceEEEEe
Confidence               1111111111 1122 568999999999955  6779999999999999999998 44566776654

>KOG0023|consensus

Probab=99.54  E-value=2.6e-14  Score=128.36  Aligned_cols=219  Identities=23%  Similarity=0.318  Sum_probs=164.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEE-cc-------Cc-----ccccC--
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF-VP-------EF-----RNVCL--   65 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~-~~-------~~-----~~~~~--   65 (408)
                      |++|||||||+|.+ .|.++.  .++|+++|||.+|+|+++|++|++||+||||-+ ..       ++     -.+|.  
T Consensus        43 I~~cGIChsDlH~~-~gdwg~--s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~  119 (360)
T KOG0023|consen   43 IEYCGVCHSDLHAW-KGDWGL--SKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKM  119 (360)
T ss_pred             EEEEeccchhHHHh-hccCCc--ccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCce
Confidence            57999999999999 666554  689999999999999999999999999999942 11       11     01222  


Q ss_pred             --------------------------CcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccc
Q psy1413          66 --------------------------SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRL  118 (408)
Q Consensus        66 --------------------------~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i  118 (408)
                                                ..+..+|+++..+.++++....-|.+-.. ...++ +|+++.|.|+|++|++++
T Consensus       120 ~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aV  198 (360)
T KOG0023|consen  120 HFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAV  198 (360)
T ss_pred             eEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHH
Confidence                                      22333344444444444443333333211 11111 588999999999999999


Q ss_pred             cccccccCcceeE---------------------------------------EEccC--c---hHHHHhhccCCcEEEEE
Q psy1413         119 SDPMIVGHEASGI---------------------------------------VSKVG--A---KVKHLKATRPGGCLVIV  154 (408)
Q Consensus       119 ~~a~~~G~~~~~v---------------------------------------v~~~g--~---~~~~~~~l~~gG~iv~~  154 (408)
                      |+||++|.++.++                                       ++++.  +   -..+++++|++|++|++
T Consensus       199 q~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~v  278 (360)
T KOG0023|consen  199 QYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLV  278 (360)
T ss_pred             HHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEE
Confidence            9999999743222                                       11111  0   01579999999999999


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCc
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNA  226 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~  226 (408)
                      |.+..+..++...+.++.+.|.|+.-.+ .+.+++++++.++.++..   .+..+++++++||++|.+++...
T Consensus       279 g~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~y  348 (360)
T KOG0023|consen  279 GLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRY  348 (360)
T ss_pred             eCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeE
Confidence            9999999999999999999999999776 899999999999999764   67889999999999999987653

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=99.52  E-value=2.5e-14  Score=130.02  Aligned_cols=219  Identities=26%  Similarity=0.354  Sum_probs=159.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEE---------------ccCcc----
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF---------------VPEFR----   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~---------------~~~~~----   61 (408)
                      |.|+|+||||+++++    +..+..+|.++|||++|+|++||++|+.+||||+|+.               .+++.    
T Consensus        34 i~AtGVCHTD~~~~~----G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~  109 (366)
T COG1062          34 ITATGVCHTDAHTLS----GDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIR  109 (366)
T ss_pred             EEEeeccccchhhhc----CCCCCCCceecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchh
Confidence            469999999999996    3455569999999999999999999999999999971               22211    


Q ss_pred             ccc-----CC----------cceeccceeeeccc--------ccCCCCCCcceEEEEeeeee-------------cCCeE
Q psy1413          62 NVC-----LS----------PILRRRFSLRFREQ--------KPIEDPDDHEVLLEMHCVGI-------------CGSDV  105 (408)
Q Consensus        62 ~~~-----~~----------~~~~~p~~~~~~~~--------~~lp~~~~~~~~~~~~~~~~-------------~g~~v  105 (408)
                      ...     .+          ..++.-.--+|.+.        ++++...+.+.+..+.+...             .|+++
T Consensus       110 ~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tv  189 (366)
T COG1062         110 ATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTV  189 (366)
T ss_pred             hhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeE
Confidence            000     00          00110000112111        23333333333333332211             48999


Q ss_pred             EEEccCccccccccccccccC-------------------------------------------cceeEEEccCchH---
Q psy1413         106 HYLTHGQIGDFRLSDPMIVGH-------------------------------------------EASGIVSKVGAKV---  139 (408)
Q Consensus       106 lv~g~G~vG~~~i~~a~~~G~-------------------------------------------~~~~vv~~~g~~~---  139 (408)
                      .|+|.|++|++++|-|+..|+                                           ..+.+++++|...   
T Consensus       190 aV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~  269 (366)
T COG1062         190 AVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMR  269 (366)
T ss_pred             EEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHH
Confidence            999999999999998877665                                           3455677777654   


Q ss_pred             HHHhhccCCcEEEEEccCCCCccc--CHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccchHH
Q psy1413         140 KHLKATRPGGCLVIVGAGSQDVKI--PLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLEDTL  213 (408)
Q Consensus       140 ~~~~~l~~gG~iv~~G~~~~~~~~--~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~  213 (408)
                      +++++++++|+.+++|.+.....+  +...++.. .+++|++..    +.++++++++..+|+++++++++|+++|+|++
T Consensus       270 ~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~IN  348 (366)
T COG1062         270 QALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDIN  348 (366)
T ss_pred             HHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHH
Confidence            789999999999999988765544  44455555 899998854    37899999999999999999999999999999


Q ss_pred             HHHHHHHcCCC
Q psy1413         214 HAFETAKTGAG  224 (408)
Q Consensus       214 ~a~~~~~~~~~  224 (408)
                      |||++|.+++.
T Consensus       349 eaf~~m~~G~~  359 (366)
T COG1062         349 EAFDLMHEGKS  359 (366)
T ss_pred             HHHHHHhCCce
Confidence            99999999753

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.52  E-value=2.7e-13  Score=129.13  Aligned_cols=124  Identities=22%  Similarity=0.164  Sum_probs=103.4

Q ss_pred             ccceeEEeecc-ceeeeCCCCCC--ccc-cc-ccchhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413         271 GNLSRYYRHAA-DFCHKLPDHVS--LEE-GA-LLEPLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASR  343 (408)
Q Consensus       271 g~~~~~~~~~~-~~~~~~p~~~~--~~~-aa-~~~~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~  343 (408)
                      ++|++|+.+++ +.++++|++++  ..+ ++ +...+.++++++ ....+.++++++|+|+ |++|+.++|+++.+|++ 
T Consensus        94 ~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~-  172 (329)
T cd05288          94 LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGAR-  172 (329)
T ss_pred             cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCE-
Confidence            47999999999 99999999985  333 33 334677888887 4467889999999997 99999999999999996 


Q ss_pred             EEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         344 VVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       344 vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ++.+++++++.+.+++ +|++.+++.++    .+..+.+.+.+. +++|++|||+|+.
T Consensus       173 vi~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~v~~~~~-~~~d~vi~~~g~~  225 (329)
T cd05288         173 VVGIAGSDEKCRWLVEELGFDAAINYKT----PDLAEALKEAAP-DGIDVYFDNVGGE  225 (329)
T ss_pred             EEEEeCCHHHHHHHHhhcCCceEEecCC----hhHHHHHHHhcc-CCceEEEEcchHH
Confidence            8888889999999888 99999999876    566777777774 6899999999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.50  E-value=3.4e-13  Score=128.13  Aligned_cols=124  Identities=27%  Similarity=0.326  Sum_probs=100.0

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc---cCcC-CCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR---AGVT-LGSKVLITGA-GPIGLVTLLTARALGASR  343 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~---~~~~-~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~  343 (408)
                      +|+|++|+.++++.++++|++++.++++.++ ...++++++..   ..+. .+++++|+|+ |++|+.++|+++.+|++ 
T Consensus        95 ~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-  173 (325)
T cd05280          95 DGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT-  173 (325)
T ss_pred             CceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-
Confidence            6899999999999999999999998888777 45566666532   2334 3569999999 99999999999999998 


Q ss_pred             EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      |+++++++++.+.++++|++.+++.++    .  ...+.+...++++|.+||++|+.
T Consensus       174 v~~~~~~~~~~~~~~~~g~~~~~~~~~----~--~~~~~~~~~~~~~d~vi~~~~~~  224 (325)
T cd05280         174 VVALTGKEEQADYLKSLGASEVLDRED----L--LDESKKPLLKARWAGAIDTVGGD  224 (325)
T ss_pred             EEEEeCCHHHHHHHHhcCCcEEEcchh----H--HHHHHHHhcCCCccEEEECCchH
Confidence            888889999999999999999987643    1  12233344456799999999874

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.48  E-value=4.8e-13  Score=125.98  Aligned_cols=118  Identities=31%  Similarity=0.382  Sum_probs=98.4

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      .|+|++|..++++.++++|+++++++++.++ ...++++++......++++++|+|+ |++|+.++++++.+|++ ++.+
T Consensus        85 ~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~  163 (305)
T cd08270          85 MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGAH-VVAV  163 (305)
T ss_pred             CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEE
Confidence            6899999999999999999999998888777 5677888875555556999999999 99999999999999996 8888


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      ++++++.+.++++|++.+++...            +++ ++++|+++|++|+..
T Consensus       164 ~~~~~~~~~~~~~g~~~~~~~~~------------~~~-~~~~d~vl~~~g~~~  204 (305)
T cd08270         164 VGSPARAEGLRELGAAEVVVGGS------------ELS-GAPVDLVVDSVGGPQ  204 (305)
T ss_pred             eCCHHHHHHHHHcCCcEEEeccc------------ccc-CCCceEEEECCCcHH
Confidence            88999999999999886664321            122 247999999998753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.46  E-value=4.1e-13  Score=124.71  Aligned_cols=121  Identities=27%  Similarity=0.351  Sum_probs=100.0

Q ss_pred             cceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         272 NLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      .|++|..++++.++++|++++.++++.+....++++++....++++++++|+|+|++|++++++++.+|+++|+++++++
T Consensus        53 ~~~~~~~v~~~~~~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~  132 (277)
T cd08255          53 PHAERVVVPANLLVPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDA  132 (277)
T ss_pred             CcceEEEcCHHHeeECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCH
Confidence            58999999999999999999987777666677788887778889999999997799999999999999998788888899


Q ss_pred             hhHHHHHHcC-CCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413         352 HKLKTAKEMG-ADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       352 ~~~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~  404 (408)
                      ++.+.++++| ++.+++...            ..+.++++|.+||++|......
T Consensus       133 ~~~~~~~~~g~~~~~~~~~~------------~~~~~~~~d~vl~~~~~~~~~~  174 (277)
T cd08255         133 ARRELAEALGPADPVAADTA------------DEIGGRGADVVIEASGSPSALE  174 (277)
T ss_pred             HHHHHHHHcCCCccccccch------------hhhcCCCCCEEEEccCChHHHH
Confidence            9999989999 566654322            1234568999999988655443

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.39  E-value=4.1e-12  Score=121.07  Aligned_cols=122  Identities=28%  Similarity=0.294  Sum_probs=97.3

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI  346 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~  346 (408)
                      .|+|++|..++.+.+.++|++++.++++.++ ...++++++ ....+.++++++|+|+ |++|+.++++++.+|++ |+.
T Consensus        91 ~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-v~~  169 (331)
T cd08273          91 VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAE-VYG  169 (331)
T ss_pred             CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEE
Confidence            4889999999999999999999988877665 677788877 4467899999999998 99999999999999997 777


Q ss_pred             EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      +.+ +++.+.++++|++. ++.+.    .+..+.  ... ++++|.+|||+|+..
T Consensus       170 ~~~-~~~~~~~~~~g~~~-~~~~~----~~~~~~--~~~-~~~~d~vl~~~~~~~  215 (331)
T cd08273         170 TAS-ERNHAALRELGATP-IDYRT----KDWLPA--MLT-PGGVDVVFDGVGGES  215 (331)
T ss_pred             EeC-HHHHHHHHHcCCeE-EcCCC----cchhhh--hcc-CCCceEEEECCchHH
Confidence            776 88888888899764 44433    222222  233 358999999998765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.36  E-value=4e-13  Score=106.38  Aligned_cols=69  Identities=32%  Similarity=0.477  Sum_probs=51.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcceec
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRR   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~   71 (408)
                      |+++|||++|++.+.+.  .....++|.++|||++|+|+++|++|++|++||||++.+...+..+..+...
T Consensus         8 v~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~   76 (109)
T PF08240_consen    8 VRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSG   76 (109)
T ss_dssp             EEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTT
T ss_pred             EEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCC
Confidence            47999999999999532  2345688999999999999999999999999999998765544333333333

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>KOG0022|consensus

Probab=99.32  E-value=5e-12  Score=113.33  Aligned_cols=218  Identities=22%  Similarity=0.294  Sum_probs=154.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEE---------------cc-------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF---------------VP-------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~---------------~~-------   58 (408)
                      +.++++||||.+.+. |.  .....||.|+|||++|+|+.+|++|+++++||+|+.               ..       
T Consensus        39 I~~t~vCHTD~~~~~-g~--~~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~  115 (375)
T KOG0022|consen   39 ILATGVCHTDAYVWS-GK--DPEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFR  115 (375)
T ss_pred             EEEEeeccccceeec-CC--CccccCceEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhc
Confidence            358999999999984 42  245678999999999999999999999999999971               00       


Q ss_pred             -Cc--c----------cccCCcceeccceeeeccc--------ccCCCCCCcceEEEEeeeee--------------cCC
Q psy1413          59 -EF--R----------NVCLSPILRRRFSLRFREQ--------KPIEDPDDHEVLLEMHCVGI--------------CGS  103 (408)
Q Consensus        59 -~~--~----------~~~~~~~~~~p~~~~~~~~--------~~lp~~~~~~~~~~~~~~~~--------------~g~  103 (408)
                       ..  .          ...-+.+++....-+|.|+        +++....+..-. .+..+++              .|+
T Consensus       116 ~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kv-cLLgCGvsTG~GAa~~~Akv~~Gs  194 (375)
T KOG0022|consen  116 ADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKV-CLLGCGVSTGYGAAWNTAKVEPGS  194 (375)
T ss_pred             ccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhhe-eEeeccccccchhhhhhcccCCCC
Confidence             00  0          0001112221111112111        222222222211 1222222              489


Q ss_pred             eEEEEccCccccccccccccccC--------------------------------------------cceeEEEccCchH
Q psy1413         104 DVHYLTHGQIGDFRLSDPMIVGH--------------------------------------------EASGIVSKVGAKV  139 (408)
Q Consensus       104 ~vlv~g~G~vG~~~i~~a~~~G~--------------------------------------------~~~~vv~~~g~~~  139 (408)
                      ++.|+|.|++|+++++-+++.|+                                            .++-.++++|...
T Consensus       195 tvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~  274 (375)
T KOG0022|consen  195 TVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVS  274 (375)
T ss_pred             EEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHH
Confidence            99999999999999999988886                                            3556677888664


Q ss_pred             ---HHHhhccCC-cEEEEEccCCCCccc--CHHHHHhcCcEEEEee----cCCCcHHHHHHHHHcCCCCCCCceeeeecc
Q psy1413         140 ---KHLKATRPG-GCLVIVGAGSQDVKI--PLVLTMTKEIDIRGVF----RYANDYPIALAMVASGKVDVKKLITHNYLL  209 (408)
Q Consensus       140 ---~~~~~l~~g-G~iv~~G~~~~~~~~--~~~~~~~~~~~l~g~~----~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l  209 (408)
                         +++.+.+.| |+-+.+|++.....+  +...++ ++.++.|+.    ....+++.+++...+++++++++|+|++||
T Consensus       275 ~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f  353 (375)
T KOG0022|consen  275 TMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF  353 (375)
T ss_pred             HHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-cccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCH
Confidence               678888888 999999988765544  444444 356666543    345889999999999999999999999999


Q ss_pred             chHHHHHHHHHcCC
Q psy1413         210 EDTLHAFETAKTGA  223 (408)
Q Consensus       210 ~~~~~a~~~~~~~~  223 (408)
                      +++++||++|.+++
T Consensus       354 ~~In~AF~ll~~Gk  367 (375)
T KOG0022|consen  354 EEINKAFDLLHEGK  367 (375)
T ss_pred             HHHHHHHHHHhCCc
Confidence            99999999999975

>KOG1202|consensus

Probab=99.21  E-value=2.4e-11  Score=124.23  Aligned_cols=134  Identities=19%  Similarity=0.190  Sum_probs=115.2

Q ss_pred             eecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHH
Q psy1413         262 FFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARA  338 (408)
Q Consensus       262 ~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~  338 (408)
                      +.++.. ...+.+.-+.++.+.+..+|.+..+++|++.| .++|+||++ .+...++++++||+++ ||+|+++|.++-+
T Consensus      1497 RvM~mv-pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa 1575 (2376)
T KOG1202|consen 1497 RVMGMV-PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALA 1575 (2376)
T ss_pred             EEEEee-ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHH
Confidence            444443 35677788888999999999999999999999 688899998 7888999999999987 9999999999999


Q ss_pred             hCCCeEEEEecChhhHHHHHH-cC---CCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         339 LGASRVVITDILEHKLKTAKE-MG---ADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       339 ~Ga~~vv~~~~~~~~~~~~~~-~g---a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      +|.+ |+.+..+.+|.+++++ |.   ...+-|+++    .+++..+...|.|+|+|+|+|+...+-
T Consensus      1576 ~G~~-VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd----tsFEq~vl~~T~GrGVdlVLNSLaeEk 1637 (2376)
T KOG1202|consen 1576 HGCT-VFTTVGSAEKREFLLKRFPQLQETNFANSRD----TSFEQHVLWHTKGRGVDLVLNSLAEEK 1637 (2376)
T ss_pred             cCCE-EEEecCcHHHHHHHHHhchhhhhhccccccc----ccHHHHHHHHhcCCCeeeehhhhhHHH
Confidence            9998 8888889999888765 33   677778887    889999999999999999999876543

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.20  E-value=5.1e-11  Score=97.46  Aligned_cols=76  Identities=36%  Similarity=0.567  Sum_probs=69.8

Q ss_pred             hhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         327 PIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       327 ~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      |+|++++|+|+.+| .+|++++++++|++.++++|+++++++++    .++.+.++++++++++|++|||+|+..+++.+
T Consensus         1 ~vG~~a~q~ak~~G-~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~----~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~   75 (130)
T PF00107_consen    1 GVGLMAIQLAKAMG-AKVIATDRSEEKLELAKELGADHVIDYSD----DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEA   75 (130)
T ss_dssp             HHHHHHHHHHHHTT-SEEEEEESSHHHHHHHHHTTESEEEETTT----SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHH
T ss_pred             ChHHHHHHHHHHcC-CEEEEEECCHHHHHHHHhhcccccccccc----cccccccccccccccceEEEEecCcHHHHHHH
Confidence            68999999999999 55999999999999999999999999988    77999999999888999999999988887765


Q ss_pred             C
Q psy1413         407 M  407 (408)
Q Consensus       407 ~  407 (408)
                      +
T Consensus        76 ~   76 (130)
T PF00107_consen   76 I   76 (130)
T ss_dssp             H
T ss_pred             H
Confidence            4

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>KOG1196|consensus

Probab=99.14  E-value=4e-10  Score=100.61  Aligned_cols=140  Identities=17%  Similarity=0.154  Sum_probs=107.3

Q ss_pred             CccccccceeecccCCCCccceeEEeecccee--eeCCCCCC----cccccccchhhhhhhhh-hccCcCCCCEEEEEec
Q psy1413         253 GRYNLCRQIFFCATPPDHGNLSRYYRHAADFC--HKLPDHVS----LEEGALLEPLSVGVHAC-RRAGVTLGSKVLITGA  325 (408)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~p~~~~----~~~aa~~~~~~~~~~~~-~~~~~~~~~~~lv~G~  325 (408)
                      +++++-++...++..    +|.+|.++++...  ++++.+.+    .-...+-.+-.|||... .....+.++|++|.|+
T Consensus        87 ~~~~~~~GD~v~g~~----gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaA  162 (343)
T KOG1196|consen   87 GHPNYKKGDLVWGIV----GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAA  162 (343)
T ss_pred             CCCCCCcCceEEEec----cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeec
Confidence            445666666666654    8999999987654  44444222    22233333566777776 6678899999999999


Q ss_pred             -chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         326 -GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       326 -G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                       |++|+.+.|+++.+|.+ ||.+..+++|.+.++. +|.|..+||.+.   .++.+.+++.. .+++|+.||.+|+.-
T Consensus       163 sGAvGql~GQ~Ak~~Gc~-VVGsaGS~EKv~ll~~~~G~d~afNYK~e---~~~~~aL~r~~-P~GIDiYfeNVGG~~  235 (343)
T KOG1196|consen  163 SGAVGQLVGQFAKLMGCY-VVGSAGSKEKVDLLKTKFGFDDAFNYKEE---SDLSAALKRCF-PEGIDIYFENVGGKM  235 (343)
T ss_pred             cchhHHHHHHHHHhcCCE-EEEecCChhhhhhhHhccCCccceeccCc---cCHHHHHHHhC-CCcceEEEeccCcHH
Confidence             99999999999999995 9999999999999855 799999999882   36777777754 579999999999763

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.03  E-value=2.3e-09  Score=96.14  Aligned_cols=205  Identities=16%  Similarity=0.093  Sum_probs=132.6

Q ss_pred             CCCccccCCccEEEEEeC--CCCCCCCCCCEEEEccCccc---ccCCcceeccce-eeec-ccccCCCCCCcceEEEEee
Q psy1413          25 SDPMIVGHEASGIVSKVG--AKVKHLKVDNQTRFVPEFRN---VCLSPILRRRFS-LRFR-EQKPIEDPDDHEVLLEMHC   97 (408)
Q Consensus        25 ~~P~i~GhE~~G~Vv~vG--~~v~~~~vGdrV~~~~~~~~---~~~~~~~~~p~~-~~~~-~~~~lp~~~~~~~~~~~~~   97 (408)
                      .+|+-+|-..+|.++...  |+...|++||-|+....+..   .+.........+ .... ..-.+--+.-|++......
T Consensus        66 ~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~i  145 (340)
T COG2130          66 APPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDI  145 (340)
T ss_pred             CCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHh
Confidence            457777877776555444  56788999999986654432   222222222110 0000 0011111233333222211


Q ss_pred             eee-cCCeEEEEc-cCccccccccccccccC------------------------------------------cceeEEE
Q psy1413          98 VGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH------------------------------------------EASGIVS  133 (408)
Q Consensus        98 ~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~------------------------------------------~~~~vv~  133 (408)
                      ... .|++++|.+ +|++|..+.|+||..|+                                          ..+..++
T Consensus       146 gqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfe  225 (340)
T COG2130         146 GQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFE  225 (340)
T ss_pred             cCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEE
Confidence            112 378888876 89999999999998776                                          3455577


Q ss_pred             ccCchH--HHHhhccCCcEEEEEcc---CCCC-cccC---HHHHHhcCcEEEEeecCC-------CcHHHHHHHHHcCCC
Q psy1413         134 KVGAKV--KHLKATRPGGCLVIVGA---GSQD-VKIP---LVLTMTKEIDIRGVFRYA-------NDYPIALAMVASGKV  197 (408)
Q Consensus       134 ~~g~~~--~~~~~l~~gG~iv~~G~---~~~~-~~~~---~~~~~~~~~~l~g~~~~~-------~~~~~~~~l~~~g~~  197 (408)
                      ++|...  ..+..|+..+|++.+|.   +..+ .+.-   +..++.|.+++.|....+       +.++++..|+++||+
T Consensus       226 NVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi  305 (340)
T COG2130         226 NVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKI  305 (340)
T ss_pred             cCCchHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCce
Confidence            888765  67999999999999994   2222 2222   235778899999987521       446889999999999


Q ss_pred             CCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         198 DVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       198 ~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +...  +.+-.||.+++||.-+.++++ .+|++++
T Consensus       306 ~~~e--ti~dGlEnaP~Af~gLl~G~N-~GK~vvK  337 (340)
T COG2130         306 QYRE--TIVDGLENAPEAFIGLLSGKN-FGKLVVK  337 (340)
T ss_pred             eeEe--eehhhhhccHHHHHHHhcCCc-cceEEEE
Confidence            8765  555569999999999999875 5566655

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=98.93  E-value=2.8e-09  Score=102.74  Aligned_cols=135  Identities=16%  Similarity=0.207  Sum_probs=113.2

Q ss_pred             ecCCeEEEEccCccccccccccccccC------------------------------cceeEEEccCchH---H-HHhhc
Q psy1413         100 ICGSDVHYLTHGQIGDFRLSDPMIVGH------------------------------EASGIVSKVGAKV---K-HLKAT  145 (408)
Q Consensus       100 ~~g~~vlv~g~G~vG~~~i~~a~~~G~------------------------------~~~~vv~~~g~~~---~-~~~~l  145 (408)
                      +.|++++|+|.|.+|+..++.++.+|+                              +++.+++++|...   + .++.+
T Consensus       200 l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~m  279 (413)
T cd00401         200 IAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFVTTTGNKDIITGEHFEQM  279 (413)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEEECCCCHHHHHHHHHhcC
Confidence            468999999999999988888877775                              3456667777543   3 48999


Q ss_pred             cCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-C-cHH--HHHHHHHcCCC-CCCCceeee-----eccc-hHHH
Q psy1413         146 RPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-N-DYP--IALAMVASGKV-DVKKLITHN-----YLLE-DTLH  214 (408)
Q Consensus       146 ~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~-~~~--~~~~l~~~g~~-~~~~~i~~~-----~~l~-~~~~  214 (408)
                      ++||+++.+|.+  +.+++...+..+++++.+++.+. + +|+  +.+.++++|++ ++..+++|.     ++|+ |+.+
T Consensus       280 k~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~  357 (413)
T cd00401         280 KDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLA  357 (413)
T ss_pred             CCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHH
Confidence            999999999965  56789999999999999999885 3 566  79999999999 999999999     9999 9999


Q ss_pred             HHHHHHcCCCCceEEEEEcCce
Q psy1413         215 AFETAKTGAGNAIKVMIHCDRV  236 (408)
Q Consensus       215 a~~~~~~~~~~~~kvvi~~~~v  236 (408)
                      +++.+.+++....||++.++.+
T Consensus       358 a~~l~~~~~~~~~kV~~~p~~~  379 (413)
T cd00401         358 QIELWTNRDKYEVGVYFLPKKL  379 (413)
T ss_pred             HHHHHhcCCcCCCcEEECCHHH
Confidence            9999999876667888777554

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=98.87  E-value=2.3e-09  Score=101.73  Aligned_cols=225  Identities=21%  Similarity=0.237  Sum_probs=165.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      |+++|+|++|++.+. |.++. ...+|.++|||++|+|+++|++|+++++||||+..+      ++...+...++..|++
T Consensus        35 v~~~~~~~~d~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~  112 (324)
T cd08292          35 TTLSPIHNHDLWTIR-GTYGY-KPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDG  112 (324)
T ss_pred             EEEccCCHHHHHHhc-CcCCC-CCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEECCCC
Confidence            468999999999884 33221 234688999999999999999999999999998754      4445666778888998


Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc-------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE-------------------------  127 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------------------------  127 (408)
                      +++++.+.++....+++... ....+ .+++++|+| .|.+|++++++|+.+|+.                         
T Consensus       113 ~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (324)
T cd08292         113 ISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVST  191 (324)
T ss_pred             CCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcC
Confidence            88866665555444443221 11222 478899987 588999999999887763                         


Q ss_pred             -----------------ceeEEEccCchH--HHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecCC-----
Q psy1413         128 -----------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRYA-----  182 (408)
Q Consensus       128 -----------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~~-----  182 (408)
                                       ++.+++++|...  +++++++++|+++.+|... ....+++..+.+++.++.+.....     
T Consensus       192 ~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (324)
T cd08292         192 EQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEM  271 (324)
T ss_pred             CCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhc
Confidence                             334444444322  5789999999999999753 345566666778999999876431     


Q ss_pred             ------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         183 ------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       183 ------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                            ..+++++++++++++++.  +.+.|+++|+.+||+.+.++. ...|+++
T Consensus       272 ~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~-~~~kvvv  323 (324)
T cd08292         272 SVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPG-RAGKVLL  323 (324)
T ss_pred             CHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCC-CCceEEe
Confidence                  357889999999998754  478899999999999998654 3455553

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=98.81  E-value=1.7e-09  Score=85.54  Aligned_cols=108  Identities=35%  Similarity=0.605  Sum_probs=88.5

Q ss_pred             cceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEEccCCCCcccCHHHH
Q psy1413          89 HEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLT  168 (408)
Q Consensus        89 ~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~  168 (408)
                      .++++.+.++++++.++.+.-..  .......+..+|.|+.|+|+.+|...+.++.                        
T Consensus         2 ~eVlVkv~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~------------------------   55 (109)
T PF08240_consen    2 GEVLVKVRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKV------------------------   55 (109)
T ss_dssp             TEEEEEEEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGT------------------------
T ss_pred             CEEEEEEEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccc------------------------
Confidence            56788899999988877664321  3445677888999999999999986555665                        


Q ss_pred             HhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceeecCCCcccccc
Q psy1413         169 MTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCT  248 (408)
Q Consensus       169 ~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~~~~~~~~~~~  248 (408)
                                                                                      +|+|...+...|+.|.
T Consensus        56 ----------------------------------------------------------------Gd~V~~~~~~~~~~c~   71 (109)
T PF08240_consen   56 ----------------------------------------------------------------GDRVVVSPNIGCGECE   71 (109)
T ss_dssp             ----------------------------------------------------------------T-EEEEESEEETSSSH
T ss_pred             ----------------------------------------------------------------cceeeeecccCccCch
Confidence                                                                            9999999988899999


Q ss_pred             cccCCccccccceeecccCCCCccceeEEeeccceeeeC
Q psy1413         249 YCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKL  287 (408)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  287 (408)
                      .|..+.+++|.+...++.. .+|+|++|+.++++.++++
T Consensus        72 ~c~~~~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   72 YCLSGRPNLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             HHHTTTGGGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred             hhcCCccccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence            9999999999999988886 8999999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>KOG1196|consensus

Probab=98.75  E-value=2.9e-08  Score=88.90  Aligned_cols=185  Identities=16%  Similarity=0.127  Sum_probs=117.4

Q ss_pred             CccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcceecccee---eecccccCCC---------CCCcceEEEEeeeee
Q psy1413          33 EASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFSL---RFREQKPIED---------PDDHEVLLEMHCVGI  100 (408)
Q Consensus        33 E~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~p~~~---~~~~~~~lp~---------~~~~~~~~~~~~~~~  100 (408)
                      .++|+|++  ++-+++++||.|.....+...   .+. -+...   ..+.....|.         +..|++..-...+..
T Consensus        78 ~GV~kVi~--S~~~~~~~GD~v~g~~gWeey---sii-~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p  151 (343)
T KOG1196|consen   78 FGVAKVID--SGHPNYKKGDLVWGIVGWEEY---SVI-TPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP  151 (343)
T ss_pred             CceEEEEe--cCCCCCCcCceEEEeccceEE---EEe-cCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC
Confidence            67899999  556889999999855433211   111 11111   1111111121         222332111111111


Q ss_pred             -cCCeEEEEc-cCccccccccccccccCc-------------------------------------------ceeEEEcc
Q psy1413         101 -CGSDVHYLT-HGQIGDFRLSDPMIVGHE-------------------------------------------ASGIVSKV  135 (408)
Q Consensus       101 -~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------------------------------------------~~~vv~~~  135 (408)
                       .|+++.|.+ +|.+|+.+.|+|+.+|+.                                           .|--++++
T Consensus       152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV  231 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV  231 (343)
T ss_pred             CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence             478898876 899999999999998872                                           33345566


Q ss_pred             CchH--HHHhhccCCcEEEEEccCC---CCcc--c-CHHHHHhcCcEEEEeecCC------CcHHHHHHHHHcCCCCCCC
Q psy1413         136 GAKV--KHLKATRPGGCLVIVGAGS---QDVK--I-PLVLTMTKEIDIRGVFRYA------NDYPIALAMVASGKVDVKK  201 (408)
Q Consensus       136 g~~~--~~~~~l~~gG~iv~~G~~~---~~~~--~-~~~~~~~~~~~l~g~~~~~------~~~~~~~~l~~~g~~~~~~  201 (408)
                      |...  ..+..++..|||+..|+-.   .+.+  + +...++.|++++.|.....      +.++.+..++++|||+..+
T Consensus       232 GG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~e  311 (343)
T KOG1196|consen  232 GGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVE  311 (343)
T ss_pred             CcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEeh
Confidence            6543  5688899999999999532   2222  2 2346789999999976432      3467788999999998654


Q ss_pred             ceeeeeccchHHHHHHHHHcCCCC
Q psy1413         202 LITHNYLLEDTLHAFETAKTGAGN  225 (408)
Q Consensus       202 ~i~~~~~l~~~~~a~~~~~~~~~~  225 (408)
                      -+..  .|+..++||.-|.++++.
T Consensus       312 di~~--Glen~P~A~vglf~GkNv  333 (343)
T KOG1196|consen  312 DIAD--GLENGPSALVGLFHGKNV  333 (343)
T ss_pred             hHHH--HHhccHHHHHHHhccCcc
Confidence            3332  499999999999998764

>cd08293 PTGR2 Prostaglandin reductase

Probab=98.65  E-value=5.5e-08  Score=93.26  Aligned_cols=228  Identities=15%  Similarity=0.130  Sum_probs=147.4

Q ss_pred             CCeeeecccchhhhhcCCCC-CCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc----cCcccccCCcceecccee
Q psy1413           1 MHCVGICGSDVHYLTHGQIG-DFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV----PEFRNVCLSPILRRRFSL   75 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~-~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~----~~~~~~~~~~~~~~p~~~   75 (408)
                      |+++|||+.|....... .+ .+..++|.++|||++|+|+++|++|++|++||||...    .++...+...++..|+.+
T Consensus        43 v~a~gin~~d~~~~~~~-~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~~~~iP~~~  121 (345)
T cd08293          43 TLYLSVDPYMRCRMNED-TGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSSLEKVDPQL  121 (345)
T ss_pred             EEEEecCHHHHhhcccc-cccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecCCCceeEEEecHHHeEEcCccc
Confidence            57999999886432111 11 1223578899999999999999999999999999864    345566677788888875


Q ss_pred             eecc----cccCCCCCCcceEEEEeeeeec-C--CeEEEEcc-CccccccccccccccC-c-------------------
Q psy1413          76 RFRE----QKPIEDPDDHEVLLEMHCVGIC-G--SDVHYLTH-GQIGDFRLSDPMIVGH-E-------------------  127 (408)
Q Consensus        76 ~~~~----~~~lp~~~~~~~~~~~~~~~~~-g--~~vlv~g~-G~vG~~~i~~a~~~G~-~-------------------  127 (408)
                      .+++    .+.++.++.+++.+......+. +  ++++|+|+ |++|++++|+++.+|+ +                   
T Consensus       122 ~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG  201 (345)
T cd08293         122 VDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG  201 (345)
T ss_pred             cccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC
Confidence            4422    2233444444432211122232 3  78999985 9999999999887775 2                   


Q ss_pred             -----------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCC---CCcc----cCH--HHH-HhcC
Q psy1413         128 -----------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGS---QDVK----IPL--VLT-MTKE  172 (408)
Q Consensus       128 -----------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~---~~~~----~~~--~~~-~~~~  172 (408)
                                             ++.+++++|...  +++++|+++|+++.+|...   .+..    ++.  ..+ ..++
T Consensus       202 a~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (345)
T cd08293         202 FDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERN  281 (345)
T ss_pred             CcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcc
Confidence                                   233444444322  5789999999999999532   1111    111  112 1234


Q ss_pred             cEEEEeec--CC----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         173 IDIRGVFR--YA----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       173 ~~l~g~~~--~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +++.+...  ..    +.+++++++++++++++.  +...++|+|+.+||+.+.+++ ..+|++++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~-~~gkvvl~  344 (345)
T cd08293         282 ITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGG-NIGKQIVK  344 (345)
T ss_pred             eEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCC-CCCeEEEE
Confidence            44433321  11    236778899999999765  445579999999999998875 45677764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=98.64  E-value=4.4e-08  Score=92.91  Aligned_cols=227  Identities=17%  Similarity=0.195  Sum_probs=163.9

Q ss_pred             CCeeeecccchhhhhcCCCC-CCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc--------CcccccCCcceec
Q psy1413           1 MHCVGICGSDVHYLTHGQIG-DFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP--------EFRNVCLSPILRR   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~-~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~--------~~~~~~~~~~~~~   71 (408)
                      |.++|+|++|++.+. |..+ .+...+|.++|||++|+|+++|+++..+++||+|+...        ++...+...++..
T Consensus        34 v~~~~i~~~d~~~~~-g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~l  112 (324)
T cd08244          34 VAAAGVHFVDTQLRS-GWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPV  112 (324)
T ss_pred             EEEEeCCHHHHHHhC-CCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeC
Confidence            468999999998874 3221 12345678999999999999999999999999998754        3445666778888


Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc----------------------
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE----------------------  127 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~----------------------  127 (408)
                      |+++.+.+.+.++..+.+++ .......+ .++.++|+| .|.+|++++++++.+|+.                      
T Consensus       113 p~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~  191 (324)
T cd08244         113 PDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVA  191 (324)
T ss_pred             CCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE
Confidence            99888866666666555442 11111122 367899988 789999998888877753                      


Q ss_pred             --------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC--
Q psy1413         128 --------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA--  182 (408)
Q Consensus       128 --------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~--  182 (408)
                                          ++.+++++|...  ..+++++++|+++.+|.... +..++...++.+++++.+.....  
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (324)
T cd08244         192 VDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAE  271 (324)
T ss_pred             EecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCC
Confidence                                333344443322  56889999999999997543 34566666778999988875432  


Q ss_pred             -----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         183 -----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       183 -----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                           +.++++++++.+++++.  ++++.|+++++++|++.+.+++ ..+|+++.
T Consensus       272 ~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~-~~~kvv~~  323 (324)
T cd08244         272 RGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARS-TVGKVLLL  323 (324)
T ss_pred             HHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCC-CCceEEEe
Confidence                 34777899999998763  4889999999999999988764 44565543

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=98.55  E-value=7.3e-08  Score=91.34  Aligned_cols=226  Identities=22%  Similarity=0.273  Sum_probs=161.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      |+++++|++|++.+ .+.+. ....+|.++|||++|+|+++|++++.+++||+|+..+      ++...+...++..|++
T Consensus        33 v~~~~~~~~d~~~~-~~~~~-~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~lp~~  110 (323)
T cd05282          33 MLAAPINPSDLITI-SGAYG-SRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPVPDS  110 (323)
T ss_pred             EEeccCCHHHHHHh-cCcCC-CCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCCCCcceeEEecCHHHeEECCCC
Confidence            46899999999987 33322 1235688999999999999999999999999999764      3445666677888888


Q ss_pred             eeecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCc-------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHE-------------------------  127 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------------------------  127 (408)
                      +.+.+.+.++....+++........ ..+++++|+| .|.+|++++++++.+|+.                         
T Consensus       111 ~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  190 (323)
T cd05282         111 ISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDS  190 (323)
T ss_pred             CCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecc
Confidence            8875555555444443322111111 2478899987 478999998888877763                         


Q ss_pred             -----------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-----
Q psy1413         128 -----------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-----  182 (408)
Q Consensus       128 -----------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-----  182 (408)
                                       ++.+++++|...  ..+++++++|+++.+|.... +..++...+..+++++.+.....     
T Consensus       191 ~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (323)
T cd05282         191 SPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSA  270 (323)
T ss_pred             cchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccC
Confidence                             233334333321  56889999999999997654 35566666666899998876432     


Q ss_pred             ------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         183 ------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       183 ------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                            ..++++++++.++++.+  .+++.|+++++.+||+.+..+. ...|+++
T Consensus       271 ~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~-~~~kvv~  322 (323)
T cd05282         271 TKEAKQETFAEVIKLVEAGVLTT--PVGAKFPLEDFEEAVAAAEQPG-RGGKVLL  322 (323)
T ss_pred             CHHHHHHHHHHHHHHHhCCCccc--CccceecHHHHHHHHHHHhcCC-CCceEee
Confidence                  23777899999998864  3789999999999999998764 3345553

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=98.55  E-value=1.3e-07  Score=89.70  Aligned_cols=224  Identities=17%  Similarity=0.223  Sum_probs=153.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~   68 (408)
                      |+++++|++|++.+. |.++ ....+|.++|||++|+|++  +++.+|++||||+..+            ++...+...+
T Consensus        33 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~  108 (323)
T TIGR02823        33 VAYSSLNYKDALAIT-GKGG-VVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWL  108 (323)
T ss_pred             EEEEEcCHHHHHHHc-CCCC-CCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhhe
Confidence            468999999999884 3322 1235688999999999998  6678899999998653            3345666677


Q ss_pred             eeccceeeecccccCCCCCCcceEEE--Eeee-eecCC-eEEEEcc-CccccccccccccccCcc---------------
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLE--MHCV-GICGS-DVHYLTH-GQIGDFRLSDPMIVGHEA---------------  128 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~--~~~~-~~~g~-~vlv~g~-G~vG~~~i~~a~~~G~~~---------------  128 (408)
                      +..|+++++.+.+.++....+++.+.  +... ...++ +++|+|+ |.+|++++++++.+|+..               
T Consensus       109 ~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~  188 (323)
T TIGR02823       109 VPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKE  188 (323)
T ss_pred             EECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHh
Confidence            88888888755555554433332111  1111 12466 8999985 999999998888777632               


Q ss_pred             ------------------------eeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecC
Q psy1413         129 ------------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRY  181 (408)
Q Consensus       129 ------------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~  181 (408)
                                              +.+++++|...  +.+++++++|+++.+|.... ...++...++.+++++.+....
T Consensus       189 ~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (323)
T TIGR02823       189 LGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSV  268 (323)
T ss_pred             cCCcEEEccccHHHHHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEecc
Confidence                                    23334333221  56889999999999997643 3445556677899999986533


Q ss_pred             --C-C----cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         182 --A-N----DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       182 --~-~----~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                        . +    .++.+.+++..++++.   +.+.|+++++++||+.+.+++ ..+|++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~a~~~~~~~~-~~~k~vv~  322 (323)
T TIGR02823       269 YCPMALREAAWQRLATDLKPRNLES---ITREITLEELPEALEQILAGQ-HRGRTVVD  322 (323)
T ss_pred             ccCchhHHHHHHHHHHHhhcCCCcC---ceeeecHHHHHHHHHHHhCCC-ccceEEEe
Confidence              1 2    2455666676777653   256899999999999998765 35566553

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=98.49  E-value=5.6e-08  Score=92.45  Aligned_cols=228  Identities=21%  Similarity=0.224  Sum_probs=153.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCCcceeccc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLSPILRRRF   73 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~~~~~~p~   73 (408)
                      |.++|+|++|++... +.++  ...+|.++|||++|+|+.+|++|+.+++||+|+...       ++.......++..|+
T Consensus        35 v~~~gi~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~  111 (327)
T PRK10754         35 NKAIGINYIDTYIRS-GLYP--PPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPD  111 (327)
T ss_pred             EEEEEcCHHHhhhcC-CCCC--CCCCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeCCC
Confidence            468999999998873 3322  234688999999999999999999999999997532       334555667778888


Q ss_pred             eeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc------------------------
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE------------------------  127 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~------------------------  127 (408)
                      ++++++.+.++....+++........+ .+++++|.| .|.+|++++++++.+|++                        
T Consensus       112 ~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~  191 (327)
T PRK10754        112 AISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVIN  191 (327)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEc
Confidence            888755554444433333221111112 478888886 789999998888887763                        


Q ss_pred             ------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-cccCHHHHHhcCc------EEEEeec
Q psy1413         128 ------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-VKIPLVLTMTKEI------DIRGVFR  180 (408)
Q Consensus       128 ------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~~~~~~~~~~~~~------~l~g~~~  180 (408)
                                        .+.++++++...  +.+++++++|+++.+|..... ..++...+..++.      .+.+.+.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (327)
T PRK10754        192 YREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYIT  271 (327)
T ss_pred             CCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccC
Confidence                              223333333221  568899999999999966532 2344433333322      2222222


Q ss_pred             CCC----cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         181 YAN----DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       181 ~~~----~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      ..+    .+.++++++.++++++..++.++|+++++.++++.+.++. ...|+++.
T Consensus       272 ~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~  326 (327)
T PRK10754        272 TREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRA-TQGSSLLI  326 (327)
T ss_pred             CHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCC-CcceEEEe
Confidence            212    2456899999999987777889999999999999988765 44666653

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=98.48  E-value=7.2e-07  Score=88.45  Aligned_cols=87  Identities=26%  Similarity=0.290  Sum_probs=66.4

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeE-EecCCCCC---------hHHHHHHHHH
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT-VLIDRNHS---------LEEISTHIIE  383 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~-i~~~~~~~---------~~~~~~~~~~  383 (408)
                      ..++++++|+|+|++|+.+++.|+.+|++ |+++++++++++.++++|++.+ ++..+...         .++..+..++
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA~-V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGAI-VRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            56799999999999999999999999995 9999999999999999999954 66533110         0133333333


Q ss_pred             H-hc-CCCCceEEEcccchh
Q psy1413         384 L-LQ-GEQPDKTIDCSGIES  401 (408)
Q Consensus       384 ~-~~-~~~~d~i~d~~g~~~  401 (408)
                      . +. .+++|++|+|+|.+.
T Consensus       241 ~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHhccCCCCEEEECCCCCc
Confidence            3 22 257999999999754

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=98.48  E-value=1.3e-07  Score=90.39  Aligned_cols=228  Identities=21%  Similarity=0.227  Sum_probs=162.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCC---CCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCCccee
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRL---SDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLSPILR   70 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~---~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~~~~~   70 (408)
                      +.++|+|++|++.+. |..+....   .+|.++|||++|+|+++|+++..+++||+|+...       ++...+...++.
T Consensus        36 v~~~gi~~~d~~~~~-g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~  114 (341)
T cd08290          36 MLAAPINPADINQIQ-GVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIK  114 (341)
T ss_pred             EEecCCCHHHHHHhc-CcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEe
Confidence            468999999999874 33221111   1678999999999999999999999999999754       445666678888


Q ss_pred             ccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCcc--------------------
Q psy1413          71 RRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHEA--------------------  128 (408)
Q Consensus        71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~~--------------------  128 (408)
                      .|+++++++.+.++....+++.+......+ .+++++|+| .|++|++++++++.+|...                    
T Consensus       115 lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~  194 (341)
T cd08290         115 VPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKAL  194 (341)
T ss_pred             CCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhc
Confidence            899888866666666555554322111122 478899987 5899999988888777642                    


Q ss_pred             ----------------------------eeEEEccCchH--HHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEE
Q psy1413         129 ----------------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRG  177 (408)
Q Consensus       129 ----------------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g  177 (408)
                                                  +.+++++|...  ..+++++++|+++.+|... .+..++...++.++.++.+
T Consensus       195 g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  274 (341)
T cd08290         195 GADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRG  274 (341)
T ss_pred             CCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEE
Confidence                                        22333333221  4678899999999999643 3455666667889999998


Q ss_pred             eecCC-----------CcHHHHHHHHHcCCCCCCCceeeee---ccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         178 VFRYA-----------NDYPIALAMVASGKVDVKKLITHNY---LLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       178 ~~~~~-----------~~~~~~~~l~~~g~~~~~~~i~~~~---~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .....           ..++++++++.++++.+.  ..+.+   +++++.++++.+.++. ...|++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~-~~~k~v~~  340 (341)
T cd08290         275 FWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGG-GGGKQVLV  340 (341)
T ss_pred             EecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcC-CCCeEEEe
Confidence            76432           147889999999998754  44455   9999999999998764 44566553

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=98.47  E-value=1.3e-07  Score=90.02  Aligned_cols=229  Identities=17%  Similarity=0.168  Sum_probs=160.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      |.++|+|++|+..+. +... .....|.++|||++|+|+++|++++.+++||+|+...      ++...+...++..|++
T Consensus        35 v~~~~i~~~d~~~~~-~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~  112 (334)
T PTZ00354         35 VSAAGVNRADTLQRQ-GKYP-PPPGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQG  112 (334)
T ss_pred             EEEEecCHHHHHHhC-CCCC-CCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEEecHHHcEeCCCC
Confidence            468999999998874 3221 1234467899999999999999999999999998652      3345666677888888


Q ss_pred             eeecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCcc------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHEA------------------------  128 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~~------------------------  128 (408)
                      +++.+.+.++.+..+++.+...... ..+++++|+| +|.+|++++++++.+|+..                        
T Consensus       113 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  192 (334)
T PTZ00354        113 YTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRY  192 (334)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEec
Confidence            8875555555554444422111111 2478899988 6899999988888777631                        


Q ss_pred             -------------------eeEEEccCch--HHHHhhccCCcEEEEEccCCC-Ccc-cCHHHHHhcCcEEEEeecCC-C-
Q psy1413         129 -------------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQ-DVK-IPLVLTMTKEIDIRGVFRYA-N-  183 (408)
Q Consensus       129 -------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~-~~~-~~~~~~~~~~~~l~g~~~~~-~-  183 (408)
                                         +.++++++..  ...+++++++|+++.+|.... ... ++...++.++.++.++.... . 
T Consensus       193 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (334)
T PTZ00354        193 PDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSD  272 (334)
T ss_pred             CChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccch
Confidence                               1222222211  146888999999999996543 333 66677778888888865432 1 


Q ss_pred             ---------cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         184 ---------DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       184 ---------~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                               .+++++++++++.+++  ++.+.+++++++++++.+.+++. .+|+++++.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~-~~kvvv~~~  329 (334)
T PTZ00354        273 EYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKN-IGKVVLTVN  329 (334)
T ss_pred             hhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCC-CceEEEecC
Confidence                     1467888999988764  47889999999999999987653 467877654

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=98.46  E-value=1.6e-07  Score=89.29  Aligned_cols=226  Identities=16%  Similarity=0.177  Sum_probs=151.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~   68 (408)
                      +.++|+|++|++.....  +.....+|.++|||++|+|++.  ++.++++||||+..+            ++...+...+
T Consensus        34 v~~~~i~~~d~~~~~~~--~~~~~~~~~~~g~e~~G~V~~~--~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~  109 (326)
T cd08289          34 VAYSSVNYKDGLASIPG--GKIVKRYPFIPGIDLAGTVVES--NDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWV  109 (326)
T ss_pred             EEEEecChHHhhhhcCC--ccccCCCCcCcccceeEEEEEc--CCCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHe
Confidence            46899999998765311  1223356899999999999995  457899999998753            3345556677


Q ss_pred             eeccceeeecccccCCCCCCcceEEEE--eeee-e-cCCeEEEEcc-CccccccccccccccCc----------------
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLEM--HCVG-I-CGSDVHYLTH-GQIGDFRLSDPMIVGHE----------------  127 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~--~~~~-~-~g~~vlv~g~-G~vG~~~i~~a~~~G~~----------------  127 (408)
                      +..|+++++.+.+.++....+++.+..  .... . .+++++|+|+ |.+|++++++|+.+|+.                
T Consensus       110 ~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  189 (326)
T cd08289         110 VPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK  189 (326)
T ss_pred             EECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH
Confidence            778888887555555544433332110  1111 1 3578999985 99999999888877752                


Q ss_pred             ------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeec
Q psy1413         128 ------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFR  180 (408)
Q Consensus       128 ------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~  180 (408)
                                              ++.+++++|...  +.+++++++|+++.+|.... ..+++...++.+++++.+...
T Consensus       190 ~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (326)
T cd08289         190 LGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDS  269 (326)
T ss_pred             cCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEe
Confidence                                    233444444321  56889999999999997643 345556677799999999753


Q ss_pred             C---CCcHHHHHHHHHcCCCC---CCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         181 Y---ANDYPIALAMVASGKVD---VKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       181 ~---~~~~~~~~~l~~~g~~~---~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .   ......+++.+.+ .+.   ....++++|+++++.+||+.+.+++. .+|++++
T Consensus       270 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~-~gkvvv~  325 (326)
T cd08289         270 VECPMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRV-TGRTVVK  325 (326)
T ss_pred             EecCchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcc-cceEEEe
Confidence            2   1234444444443 222   23356999999999999999987754 4556543

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=98.40  E-value=2.8e-07  Score=75.16  Aligned_cols=68  Identities=32%  Similarity=0.508  Sum_probs=61.2

Q ss_pred             cceeEEEccCchH---HHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHc
Q psy1413         127 EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVAS  194 (408)
Q Consensus       127 ~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~  194 (408)
                      .++.+++++|...   .++++++++|+++.+|.+. .+.+++...++++++++.|++.++ ++++++++++++
T Consensus        58 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   58 GVDVVIDCVGSGDTLQEAIKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             SEEEEEESSSSHHHHHHHHHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred             cceEEEEecCcHHHHHHHHHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence            5888999999554   7899999999999999988 789999999999999999999998 899999999864

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=98.39  E-value=3e-07  Score=86.84  Aligned_cols=222  Identities=15%  Similarity=0.196  Sum_probs=153.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~   68 (408)
                      +++++||++|++.+. +..+  ...+|.++|||++|+|+++|+  ..+++||+|+...            ++...+...+
T Consensus        34 v~~~~i~~~d~~~~~-~~~~--~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~  108 (320)
T cd08243          34 VKAFGLNRSEIFTRQ-GHSP--SVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQV  108 (320)
T ss_pred             EEEEecCHHHHHHhc-CCCC--CCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHc
Confidence            468999999999874 3221  235688999999999999995  5799999998653            2334555567


Q ss_pred             eeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEcc-CccccccccccccccCcc------------------
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTH-GQIGDFRLSDPMIVGHEA------------------  128 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~-G~vG~~~i~~a~~~G~~~------------------  128 (408)
                      +..|+++++++.+.++.++.+++.+...... ..+++++|+|+ |.+|++++++++.+|+..                  
T Consensus       109 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~  188 (320)
T cd08243         109 YAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGA  188 (320)
T ss_pred             EeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC
Confidence            7888888876666666666555532211121 24789999984 899999999888777642                  


Q ss_pred             ---------------------eeEEEccCch--HHHHhhccCCcEEEEEccCCCCcc---cCHHHHH--hcCcEEEEeec
Q psy1413         129 ---------------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQDVK---IPLVLTM--TKEIDIRGVFR  180 (408)
Q Consensus       129 ---------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~~~~---~~~~~~~--~~~~~l~g~~~  180 (408)
                                           +.+++++|..  .+.+++++++|+++.+|.......   .......  .+++++.+...
T Consensus       189 ~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (320)
T cd08243         189 DEVVIDDGAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS  268 (320)
T ss_pred             cEEEecCccHHHHHHHhCCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence                                 2223333321  156889999999999997543222   2222222  67777777654


Q ss_pred             CC---CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         181 YA---NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       181 ~~---~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                      ..   ..+++++++++++.+++  ++++.|+++++++|++.+.+++. .+|++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~-~~kvv  318 (320)
T cd08243         269 GDVPQTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRA-FGKVV  318 (320)
T ss_pred             hhhhHHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCC-CCcEE
Confidence            33   35788999999998864  37788999999999999987643 33443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=98.38  E-value=2.5e-07  Score=88.26  Aligned_cols=223  Identities=17%  Similarity=0.231  Sum_probs=155.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCcceec
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILRR   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~~   71 (408)
                      |+++++|++|++.+. +..  ....+|.++|||++|+|+++|++|+.|++||+|+...         ++...+...++..
T Consensus        36 v~~~~i~~~d~~~~~-g~~--~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i  112 (336)
T TIGR02817        36 VKAISVNPVDTKVRA-RMA--PEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHK  112 (336)
T ss_pred             EEEEEcChHHHHHHc-CCC--CCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccC
Confidence            468999999999874 432  1235688999999999999999999999999998642         3445666677888


Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeeec------CCeEEEEc-cCccccccccccccc-cCc----------------
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGIC------GSDVHYLT-HGQIGDFRLSDPMIV-GHE----------------  127 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~------g~~vlv~g-~G~vG~~~i~~a~~~-G~~----------------  127 (408)
                      |+++++++.+.++....+++.+......+.      +++++|+| +|++|++++++++.+ |+.                
T Consensus       113 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~  192 (336)
T TIGR02817       113 PKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLE  192 (336)
T ss_pred             CCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHH
Confidence            999988667777766665543321222222      78899988 689999999999887 753                


Q ss_pred             ------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeec
Q psy1413         128 ------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFR  180 (408)
Q Consensus       128 ------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~  180 (408)
                                              ++.++++++..   ...+++++++|+++.++..   ..++...+..+++++.+...
T Consensus       193 ~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~  269 (336)
T TIGR02817       193 LGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFM  269 (336)
T ss_pred             cCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEe
Confidence                                    12233333221   2578999999999988532   34455555566666664321


Q ss_pred             C------C-------CcHHHHHHHHHcCCCCCCCceeeee---ccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         181 Y------A-------NDYPIALAMVASGKVDVKKLITHNY---LLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       181 ~------~-------~~~~~~~~l~~~g~~~~~~~i~~~~---~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .      .       ..++++++++.++++++  ++++.+   +++++++||+.+.+++. .+|+++.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~  334 (336)
T TIGR02817       270 FTRSMFQTADMIEQHHLLNRVARLVDAGKIRT--TLAETFGTINAANLKRAHALIESGKA-RGKIVLE  334 (336)
T ss_pred             ecccccchhhhhhhHHHHHHHHHHHHCCCeec--cchhccCCCCHHHHHHHHHHHHcCCc-cceEEEe
Confidence            1      0       23688999999998864  344555   47999999999998754 4566654

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=98.36  E-value=6.4e-07  Score=85.77  Aligned_cols=227  Identities=16%  Similarity=0.134  Sum_probs=152.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc--------------CcccccCC
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP--------------EFRNVCLS   66 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~--------------~~~~~~~~   66 (408)
                      |+++|||++|++.+..+.    ...+|.++|||++|+|+.+|++++.+++||+|+...              ++...+..
T Consensus        33 v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~  108 (339)
T cd08249          33 VKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADAD  108 (339)
T ss_pred             EEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechh
Confidence            468999999999874221    124578899999999999999999999999998754              33345556


Q ss_pred             cceeccceeeecccccCCCCCCcceEEEEeeee-----------ecCCeEEEEc-cCccccccccccccccCc-------
Q psy1413          67 PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-----------ICGSDVHYLT-HGQIGDFRLSDPMIVGHE-------  127 (408)
Q Consensus        67 ~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-----------~~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------  127 (408)
                      .++..|+++++++.+.++.++.+++........           ..+++++|+| .|.+|++++++++.+|+.       
T Consensus       109 ~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~  188 (339)
T cd08249         109 LTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASP  188 (339)
T ss_pred             heEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEECc
Confidence            777888888886666666665555432211111           2478899998 489999998888877753       


Q ss_pred             ---------------------------------ceeEEEccCc-h--HHHHhhccC--CcEEEEEccCCCCcccCHHHHH
Q psy1413         128 ---------------------------------ASGIVSKVGA-K--VKHLKATRP--GGCLVIVGAGSQDVKIPLVLTM  169 (408)
Q Consensus       128 ---------------------------------~~~vv~~~g~-~--~~~~~~l~~--gG~iv~~G~~~~~~~~~~~~~~  169 (408)
                                                       ++.+++++|. .  .++++++++  +|+++.+|.......+. ....
T Consensus       189 ~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~-~~~~  267 (339)
T cd08249         189 KNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR-KGVK  267 (339)
T ss_pred             ccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCC-CCce
Confidence                                             2344444443 1  257889999  99999999765432111 1111


Q ss_pred             hcCcEEEEeec-----C---CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         170 TKEIDIRGVFR-----Y---ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       170 ~~~~~l~g~~~-----~---~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .+.........     .   ...+++++++++++++.+.++.+..++++++++||+.+..++....|++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~  338 (339)
T cd08249         268 VKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVR  338 (339)
T ss_pred             EEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEe
Confidence            11111111111     1   134778999999999987644443344999999999999876456777764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=98.34  E-value=4.6e-07  Score=86.21  Aligned_cols=225  Identities=21%  Similarity=0.240  Sum_probs=158.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----CcccccCCcceecccee
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----EFRNVCLSPILRRRFSL   75 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----~~~~~~~~~~~~~p~~~   75 (408)
                      |.++|||++|++.. .|.+. ....+|.++|||++|+|+++|+++..+++||+|....     ++...+...++..|+. 
T Consensus        37 v~~~gi~~~d~~~~-~g~~~-~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~~~~ip~~-  113 (329)
T cd08250          37 NRFVGINASDINFT-AGRYD-PGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMSFGAFAEYQVVPARHAVPVPEL-  113 (329)
T ss_pred             EEEEecCHHHHHHH-hCCCC-CCCCCCcccCceeEEEEEEECCCCCCCCCCCEEEEecCcceeEEEEechHHeEECCCC-
Confidence            46899999999987 44321 1246789999999999999999999999999998642     3445666677777775 


Q ss_pred             eecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCc--------------------------
Q psy1413          76 RFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHE--------------------------  127 (408)
Q Consensus        76 ~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~--------------------------  127 (408)
                       +++.+.++..+.+++.+...... ..+++++|+| +|.+|++++++++..|++                          
T Consensus       114 -~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~  192 (329)
T cd08250         114 -KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYK  192 (329)
T ss_pred             -cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCC
Confidence             23445555555444432211112 2478899988 689999988888877753                          


Q ss_pred             ---------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-----------cccCHHHHHhcCcEEEEee
Q psy1413         128 ---------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-----------VKIPLVLTMTKEIDIRGVF  179 (408)
Q Consensus       128 ---------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-----------~~~~~~~~~~~~~~l~g~~  179 (408)
                                     ++.+++++|...  +.+++++++|+++.+|.....           ..++ ...+.+++++.+..
T Consensus       193 ~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  271 (329)
T cd08250         193 TEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFF  271 (329)
T ss_pred             CccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEE
Confidence                           223344443221  568899999999999965421           1222 24567888988875


Q ss_pred             cC------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         180 RY------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       180 ~~------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      ..      .+.+.+++++++++.+++.....+.|+++++++||+.+.+++ ...|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~kvvv  328 (329)
T cd08250         272 LPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGK-NIGKVVV  328 (329)
T ss_pred             hHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCC-CCceEEe
Confidence            43      245788999999999887555677899999999999999764 3456654

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=98.31  E-value=9.7e-07  Score=71.64  Aligned_cols=98  Identities=24%  Similarity=0.340  Sum_probs=62.1

Q ss_pred             cCcceeEEEccC--chH---HHHhhccCCcEEEEEccCCCCcccCHHHHHhc--CcEEEEeec---C--C-CcHHHHHHH
Q psy1413         125 GHEASGIVSKVG--AKV---KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTK--EIDIRGVFR---Y--A-NDYPIALAM  191 (408)
Q Consensus       125 G~~~~~vv~~~g--~~~---~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~--~~~l~g~~~---~--~-~~~~~~~~l  191 (408)
                      +..++.+++++|  ...   .+.++| ++|+++.+|.     .+.......+  .++......   .  . +.+++++++
T Consensus        17 ~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l   90 (127)
T PF13602_consen   17 PGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKGRSIRYSFLFSVDPNAIRAEALEELAEL   90 (127)
T ss_dssp             TS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHCHHCEEECCC-H--HHHHHHHHHHHHHH
T ss_pred             CCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcccceEEEEEEecCCCchHHHHHHHHHHH
Confidence            456788999999  331   345667 9999999984     2122222222  333333321   1  2 459999999


Q ss_pred             HHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         192 VASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       192 ~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      +++|++++  .+.++|||+|+.+|++.+++++.. +|+|+
T Consensus        91 ~~~G~l~~--~i~~~f~l~~~~~A~~~l~~~~~~-GKvVl  127 (127)
T PF13602_consen   91 VAEGKLKP--PIDRVFPLEEAPEAHERLESGHAR-GKVVL  127 (127)
T ss_dssp             HHTTSS-----EEEEEEGGGHHHHHHHHHCT--S-SEEEE
T ss_pred             HHCCCeEE--eeccEECHHHHHHHHHHHHhCCCC-CeEeC
Confidence            99999865  589999999999999999998765 66654

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=98.26  E-value=6.5e-07  Score=85.41  Aligned_cols=225  Identities=17%  Similarity=0.196  Sum_probs=153.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCcceec
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILRR   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~~   71 (408)
                      +.++|+|++|++.+. +..+  ..++|.++|||++|+|+++|+++..+++||+|....         ++...+...++..
T Consensus        37 v~~~~i~~~d~~~~~-~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i  113 (336)
T cd08252          37 VEAVSVNPVDTKVRA-GGAP--VPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHK  113 (336)
T ss_pred             EEEEEcCHHHHHHHc-CCCC--CCCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeC
Confidence            358999999999874 3222  234677899999999999999999999999998752         2334555567777


Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeee-c-----CCeEEEEc-cCcccccccccccccc-Cc----------------
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGI-C-----GSDVHYLT-HGQIGDFRLSDPMIVG-HE----------------  127 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~-----g~~vlv~g-~G~vG~~~i~~a~~~G-~~----------------  127 (408)
                      |+++++++.+.++....+++........+ .     +++++|+| .|++|++++++++.+| ..                
T Consensus       114 p~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~  193 (336)
T cd08252         114 PKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKE  193 (336)
T ss_pred             CCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh
Confidence            88777755555554444443221111222 2     68899988 6899999999888888 42                


Q ss_pred             ------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeec
Q psy1413         128 ------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFR  180 (408)
Q Consensus       128 ------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~  180 (408)
                                              ++.+++++|..   ..++++++++|+++.+|...  ..++...+..++.++.+...
T Consensus       194 ~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~  271 (336)
T cd08252         194 LGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFM  271 (336)
T ss_pred             cCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEe
Confidence                                    22334444321   25688999999999999653  34455555678888876432


Q ss_pred             C------C-------CcHHHHHHHHHcCCCCCCCc-eeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         181 Y------A-------NDYPIALAMVASGKVDVKKL-ITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       181 ~------~-------~~~~~~~~l~~~g~~~~~~~-i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                      .      .       ..++++++++.++.+++... ..+.++++++++||+.+.+++ ...|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~vv~  335 (336)
T cd08252         272 FTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGK-TIGKIVL  335 (336)
T ss_pred             eccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCC-ccceEEe
Confidence            1      1       22678999999998875321 234589999999999999765 3445543

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=98.25  E-value=1.4e-06  Score=82.03  Aligned_cols=224  Identities=21%  Similarity=0.257  Sum_probs=154.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      |.++|+|++|++... +.   .+..+|.++|||++|+|+.+|+++.++++||+|....      ++.......++..|++
T Consensus        33 v~~~~i~~~d~~~~~-~~---~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~  108 (320)
T cd05286          33 NTAIGVNFIDTYFRS-GL---YPLPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDG  108 (320)
T ss_pred             EEEeecCHHHHHHhc-CC---CCCCCCccCCcceeEEEEEECCCCCCCCCCCEEEEecCCCceeEEEEecHHHceeCCCC
Confidence            457899999999874 32   2235688999999999999999999999999998753      2334555667777887


Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc-------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE-------------------------  127 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------------------------  127 (408)
                      +++.+.+.++....+++........+ .+++++|+| .|++|++++++++.+|+.                         
T Consensus       109 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  188 (320)
T cd05286         109 ISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINY  188 (320)
T ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeC
Confidence            77755554554444333221111222 478899998 689999988888877763                         


Q ss_pred             -----------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-cccCHHHHHhcCcEEEEeec----CC-
Q psy1413         128 -----------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-VKIPLVLTMTKEIDIRGVFR----YA-  182 (408)
Q Consensus       128 -----------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~~~~~~~~~~~~~~l~g~~~----~~-  182 (408)
                                       ++.++++++...  ..+++++++|+++.+|..... ..++...+..+++++.+...    .. 
T Consensus       189 ~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (320)
T cd05286         189 RDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATR  268 (320)
T ss_pred             CchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCH
Confidence                             223333333211  468899999999999975543 33455555578888865421    11 


Q ss_pred             ----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         183 ----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       183 ----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                          ..+.++++++.++.+.+.  +++.|++++++++|+.+.++.. ..|+++
T Consensus       269 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~-~~~vv~  318 (320)
T cd05286         269 EELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKT-TGKLLL  318 (320)
T ss_pred             HHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCC-CceEEE
Confidence                224678889999887643  7789999999999999987653 345554

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=98.20  E-value=2.3e-06  Score=81.12  Aligned_cols=223  Identities=17%  Similarity=0.216  Sum_probs=152.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~   68 (408)
                      |.++++|++|++.+ .+.+. ....+|.++|||++|+|++  ++++.+++||+|....            ++...+...+
T Consensus        34 v~~~~i~~~d~~~~-~g~~~-~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~  109 (324)
T cd08288          34 VHYSTLNYKDGLAI-TGKGG-IVRTFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWL  109 (324)
T ss_pred             EEEEecCHHHHHHh-cCCcc-ccCCCCCccccceEEEEEe--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHe
Confidence            46899999999987 33321 1234688899999999999  7888899999998742            3335555677


Q ss_pred             eeccceeeecccccCCCCCCcceEEE--Eeeeee--cCCeEEEEcc-CccccccccccccccCcce--------------
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLE--MHCVGI--CGSDVHYLTH-GQIGDFRLSDPMIVGHEAS--------------  129 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~--~~~~~~--~g~~vlv~g~-G~vG~~~i~~a~~~G~~~~--------------  129 (408)
                      +..|+++++++.+.++....++..+.  ......  .+++++|+|+ |++|++++++++.+|++..              
T Consensus       110 ~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~  189 (324)
T cd08288         110 VPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRS  189 (324)
T ss_pred             eeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh
Confidence            78888888755555554433332110  001122  3578999985 9999999999998887421              


Q ss_pred             -------------------------eEEEccCchH--HHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecC
Q psy1413         130 -------------------------GIVSKVGAKV--KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRY  181 (408)
Q Consensus       130 -------------------------~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~  181 (408)
                                               .++++++...  ..+..++.+|+++.+|... .+..+++..++.+++++.+....
T Consensus       190 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (324)
T cd08288         190 LGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSV  269 (324)
T ss_pred             cCCCEEEEcchhhHhhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEee
Confidence                                     2244444311  4567778889999999753 23345555666899999987522


Q ss_pred             --C-----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         182 --A-----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       182 --~-----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                        .     ..++.+++++.++++++   +.+.++++++++||+.+.+++. ..|+++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~-~~~vvv  322 (324)
T cd08288         270 MAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQV-RGRVVV  322 (324)
T ss_pred             cccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCc-cCeEEE
Confidence              1     23566777887887753   4789999999999999987764 345554

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.20  E-value=2.6e-06  Score=80.25  Aligned_cols=108  Identities=25%  Similarity=0.343  Sum_probs=80.7

Q ss_pred             ceeeeCCCCCCcccccccchhhhhhhhhhccCc----CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhH-HH
Q psy1413         282 DFCHKLPDHVSLEEGALLEPLSVGVHACRRAGV----TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKL-KT  356 (408)
Q Consensus       282 ~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~----~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-~~  356 (408)
                      ...+++|+.+..+.+....+.++++.+++....    .++.+++|+|+|.+|+.+++.++..|+..|++++|+.++. +.
T Consensus       139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l  218 (311)
T cd05213         139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL  218 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            345667888887777777777777777643322    4689999999999999999999999988899999998876 55


Q ss_pred             HHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         357 AKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       357 ~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      ++++|+. +++.      +++.+.+      ...|+||.|++.+.+
T Consensus       219 a~~~g~~-~~~~------~~~~~~l------~~aDvVi~at~~~~~  251 (311)
T cd05213         219 AKELGGN-AVPL------DELLELL------NEADVVISATGAPHY  251 (311)
T ss_pred             HHHcCCe-EEeH------HHHHHHH------hcCCEEEECCCCCch
Confidence            6778873 3332      3333333      247999999998776

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=98.18  E-value=2.2e-06  Score=80.71  Aligned_cols=220  Identities=20%  Similarity=0.238  Sum_probs=154.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      +.++|+|++|++.. .+... .+..+|.++|||++|+|+++|+++..+++||+|+...      ++...+...++..|++
T Consensus        34 v~~~~i~~~d~~~~-~~~~~-~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~  111 (323)
T cd05276          34 VAAAGVNRADLLQR-QGLYP-PPPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEG  111 (323)
T ss_pred             EEEeecCHHHHHHh-CCCCC-CCCCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccCCCC
Confidence            45899999999887 34322 2335688999999999999999999999999998653      2334555667777887


Q ss_pred             eeecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCc-------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHE-------------------------  127 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------------------------  127 (408)
                      +++.+.+.++.+..+++.+...... ..+++++|+| .|++|+..+++++..|+.                         
T Consensus       112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (323)
T cd05276         112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINY  191 (323)
T ss_pred             CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeC
Confidence            7775555565555444432111112 2467899988 578998887777766653                         


Q ss_pred             -----------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCCC----
Q psy1413         128 -----------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYAN----  183 (408)
Q Consensus       128 -----------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~~----  183 (408)
                                       ++.++++.|...  ..+++++++|+++.+|.... ...++...++.+++++.++.....    
T Consensus       192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (323)
T cd05276         192 RTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEE  271 (323)
T ss_pred             CchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhc
Confidence                             223334333221  45788899999999996543 345666666789999998764321    


Q ss_pred             -------cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         184 -------DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       184 -------~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                             .++++++++.++++.  ++.++.|++++++++++.+.++..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~  317 (323)
T cd05276         272 KAALAAAFREHVWPLFASGRIR--PVIDKVFPLEEAAEAHRRMESNEH  317 (323)
T ss_pred             cHHHHHHHHHHHHHHHHCCCcc--CCcceEEcHHHHHHHHHHHHhCCC
Confidence                   246788888888885  357899999999999999987643

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.17  E-value=1e-05  Score=70.11  Aligned_cols=83  Identities=20%  Similarity=0.252  Sum_probs=60.3

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-------hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC-C
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILE-------HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG-E  388 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-------~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~  388 (408)
                      .+|||+|+ |++|+.+++++...|++++++++|+.       +..+.+++.|+...+-..|..+.+++.+.+.++... .
T Consensus         1 gtylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    1 GTYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            47999999 99999999999999999999999982       123456777887776677777888999988887654 4


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      +++.||.+.|..
T Consensus        81 ~i~gVih~ag~~   92 (181)
T PF08659_consen   81 PIDGVIHAAGVL   92 (181)
T ss_dssp             -EEEEEE-----
T ss_pred             Ccceeeeeeeee
Confidence            789999999864

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=98.13  E-value=1.5e-06  Score=83.50  Aligned_cols=227  Identities=21%  Similarity=0.292  Sum_probs=151.2

Q ss_pred             CCeeeecccchhhhhcCCCC--------C-----CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------
Q psy1413           1 MHCVGICGSDVHYLTHGQIG--------D-----FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~--------~-----~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------   58 (408)
                      |.++++|++|++.+. +...        .     ....+|.++|||++|+|+++|++++++++||||+..+         
T Consensus        36 v~~~~i~~~d~~~~~-g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~  114 (350)
T cd08248          36 VHAASVNPIDVLMRS-GYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHA  114 (350)
T ss_pred             EEEEecCchhHHHHc-CCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccCCCCCEEEEecCCCCCccce
Confidence            468999999999874 3210        0     0246688999999999999999999999999998753         


Q ss_pred             CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-----cCCeEEEEc-cCccccccccccccccCcc----
Q psy1413          59 EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-----CGSDVHYLT-HGQIGDFRLSDPMIVGHEA----  128 (408)
Q Consensus        59 ~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-----~g~~vlv~g-~G~vG~~~i~~a~~~G~~~----  128 (408)
                      ++...+...++..|+.+++.+.+.++....+++........+     .+++++|+| .|.+|++++++++.+|+..    
T Consensus       115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~  194 (350)
T cd08248         115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTC  194 (350)
T ss_pred             eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence            344566667788888887755555555555544321111222     378999998 6999999988888777642    


Q ss_pred             ----------------------------------eeEEEccCchH--HHHhhccCCcEEEEEccCCCC----ccc-----
Q psy1413         129 ----------------------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD----VKI-----  163 (408)
Q Consensus       129 ----------------------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~----~~~-----  163 (408)
                                                        +.+++++|...  ..+++++++|+++.+|.....    ..+     
T Consensus       195 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  274 (350)
T cd08248         195 STDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGML  274 (350)
T ss_pred             CcchHHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhh
Confidence                                              23333433221  568999999999999854311    111     


Q ss_pred             ----CHHHHHhc----CcEEE-EeecC-CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         164 ----PLVLTMTK----EIDIR-GVFRY-ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       164 ----~~~~~~~~----~~~l~-g~~~~-~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                          ++..+..+    ...+. +.... ...+.++++++.++.++  +++++.|+++++.++|+.+.+++. ..|+++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~-~~~vv~  349 (350)
T cd08248         275 KSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIK--PVIDKVFPFEEVPEAYEKVESGHA-RGKTVI  349 (350)
T ss_pred             hhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEe--cccceeecHHHHHHHHHHHhcCCC-ceEEEe
Confidence                11111111    11111 11122 35689999999999875  358899999999999999987653 345543

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=98.11  E-value=3e-06  Score=79.90  Aligned_cols=225  Identities=22%  Similarity=0.311  Sum_probs=152.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      +.++++|++|++.+. +... ....+|.++|||++|+|+.+|+++..+++||+|+..+      .+.......++..|++
T Consensus        34 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~  111 (323)
T cd08241          34 VEAAGVNFPDLLMIQ-GKYQ-VKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDG  111 (323)
T ss_pred             EEEEecCHHHHHHHc-CCCC-CCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHHceeCCCC
Confidence            357899999999873 3321 1224577899999999999999999999999999764      2234445566777777


Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccCc-------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGHE-------------------------  127 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~~-------------------------  127 (408)
                      +++.+...++.+..+++........+ .++.++|+|+ |.+|++.+++++..|+.                         
T Consensus       112 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (323)
T cd08241         112 LSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDY  191 (323)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeec
Confidence            76644333444333333211111112 4678889885 88998887777766643                         


Q ss_pred             -----------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcc-cCHHHHHhcCcEEEEeecCC-----
Q psy1413         128 -----------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVK-IPLVLTMTKEIDIRGVFRYA-----  182 (408)
Q Consensus       128 -----------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~-~~~~~~~~~~~~l~g~~~~~-----  182 (408)
                                       ++.+++++|...  ..+++++++|+++.+|....... ++......++.++.+.....     
T Consensus       192 ~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (323)
T cd08241         192 RDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARRE  271 (323)
T ss_pred             CCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchh
Confidence                             233344443311  46889999999999997654333 44545677889988875331     


Q ss_pred             -----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         183 -----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       183 -----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                           ..++++++++.++.+.  +++++.|+++++.++|+.+..+.. ..|++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv  321 (323)
T cd08241         272 PELLRANLAELFDLLAEGKIR--PHVSAVFPLEQAAEALRALADRKA-TGKVV  321 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCCcc--cccceEEcHHHHHHHHHHHHhCCC-CCcEE
Confidence                 2467788999998875  457899999999999999886643 34444

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.07  E-value=0.00014  Score=72.55  Aligned_cols=82  Identities=26%  Similarity=0.271  Sum_probs=56.3

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh--hhHHH-HHHcCCCe-EEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE--HKLKT-AKEMGADA-TVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~--~~~~~-~~~~ga~~-~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++|||+|+ |++|..+++++...|++ |+++++..  ++++. .++++... .+|.   .+.+++++.+..+.. ..
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~-vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv---~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAH-VVCLDVPAAGEALAAVANRVGGTALALDI---TAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHHHHhCC
Confidence            46789999999 99999999999999998 77777642  33333 34455432 2333   345666666655543 23


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|.+|++.|..
T Consensus       284 ~id~vi~~AG~~  295 (450)
T PRK08261        284 GLDIVVHNAGIT  295 (450)
T ss_pred             CCCEEEECCCcC
Confidence            799999999853

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.06  E-value=4.1e-05  Score=69.39  Aligned_cols=85  Identities=26%  Similarity=0.311  Sum_probs=65.8

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc----CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM----GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~----ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      ....++||+|+ +|+|..+++.+...|.. +++++|+.+|++.+ +++    |....+-..|.++.++.++...++.. +
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~-liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYN-LILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            56689999999 99999999999999997 99999999998765 333    33333445555666777777777654 3


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      ..+|+.+|++|-.
T Consensus        83 ~~IdvLVNNAG~g   95 (265)
T COG0300          83 GPIDVLVNNAGFG   95 (265)
T ss_pred             CcccEEEECCCcC
Confidence            5799999999844

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=98.02  E-value=7e-06  Score=77.51  Aligned_cols=226  Identities=21%  Similarity=0.236  Sum_probs=155.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      |.++++|++|++.+. +.+. .+..+|.++|||++|+|+.+|+++..+++||+|+...      .+...+...++..|+.
T Consensus        34 v~~~~~~~~d~~~~~-~~~~-~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~  111 (325)
T TIGR02824        34 VAAAGVNRPDLLQRA-GKYP-PPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEG  111 (325)
T ss_pred             EEEEecCHHHHHHhc-CCCC-CCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeCCCC
Confidence            357899999998873 3222 2234578999999999999999999999999998752      2334455566777777


Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc-------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE-------------------------  127 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------------------------  127 (408)
                      +++.+.+.++.+..+++........+ .+++++|.| .|++|++++++++.+|++                         
T Consensus       112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
T TIGR02824       112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINY  191 (325)
T ss_pred             CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEec
Confidence            77655555555544444221112222 477888988 588998888877766653                         


Q ss_pred             -----------------ceeEEEccCch--HHHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-----
Q psy1413         128 -----------------ASGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-----  182 (408)
Q Consensus       128 -----------------~~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-----  182 (408)
                                       ++.+++++|..  ...+++++++|+++.+|.... ...++...++.+++++.+.....     
T Consensus       192 ~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (325)
T TIGR02824       192 REEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAE  271 (325)
T ss_pred             CchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhh
Confidence                             22233333321  146788999999999996542 23566666778999999876332     


Q ss_pred             ------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         183 ------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       183 ------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                            ..+.++++++++++++  +++++.|++++++++++.+.++.. ..|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~  323 (325)
T TIGR02824       272 KAAIAAELREHVWPLLASGRVR--PVIDKVFPLEDAAQAHALMESGDH-IGKIVL  323 (325)
T ss_pred             hHHHHHHHHHHHHHHHHCCccc--CccccEEeHHHHHHHHHHHHhCCC-cceEEE
Confidence                  1145677888888875  347889999999999999887643 445554

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.98  E-value=1.1e-05  Score=76.11  Aligned_cols=226  Identities=25%  Similarity=0.345  Sum_probs=153.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----------CcccccCCcce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----------EFRNVCLSPIL   69 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----------~~~~~~~~~~~   69 (408)
                      +.++++|++|++.+ .+... ....+|.++|||++|+|+++|+++++|++||+|+..+           .+.......++
T Consensus        34 v~~~~i~~~d~~~~-~g~~~-~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~  111 (325)
T cd08253          34 VHASGVNPVDTYIR-AGAYP-GLPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLV  111 (325)
T ss_pred             EEEEecChhHhhhc-cCCCC-CCCCCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcE
Confidence            35889999999987 33322 2235788999999999999999999999999998764           22344445667


Q ss_pred             eccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc--------------------
Q psy1413          70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE--------------------  127 (408)
Q Consensus        70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~--------------------  127 (408)
                      ..|+++++.+.+.++.+..+++........+ .+++++|+| .+++|++++++++..|.+                    
T Consensus       112 ~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  191 (325)
T cd08253         112 PLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGAD  191 (325)
T ss_pred             eCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence            7777777655555555544443221111122 478899988 588998888877766653                    


Q ss_pred             ----------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-
Q psy1413         128 ----------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-  182 (408)
Q Consensus       128 ----------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-  182 (408)
                                            ++.++++.+...  ..+++++++|+++.+|.......++...++.++.++.+...+. 
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (325)
T cd08253         192 AVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTA  271 (325)
T ss_pred             EEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhc
Confidence                                  222333333221  3578889999999999765445566666677888887765332 


Q ss_pred             --C----cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         183 --N----DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       183 --~----~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                        .    .++++.+++.++.+++  +.++.|++++++++++.+.++. ..+|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~-~~~kvv~  323 (325)
T cd08253         272 TPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGG-AIGKVVL  323 (325)
T ss_pred             CHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCC-CcceEEE
Confidence              2    2455667777777653  4788999999999999998754 4455554

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.97  E-value=3.3e-06  Score=82.80  Aligned_cols=140  Identities=19%  Similarity=0.275  Sum_probs=91.8

Q ss_pred             ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeee---C-CCCCCcccccccchhhhhhh-hh
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHK---L-PDHVSLEEGALLEPLSVGVH-AC  309 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~-p~~~~~~~aa~~~~~~~~~~-~~  309 (408)
                      .|...|.. |++|..|    ++.|.....+|. ..++.|++++.+.. .+..   | +..++...+        +.. +.
T Consensus       108 ~V~GE~qI-~gQvk~a----~~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~--------Av~la~  172 (417)
T TIGR01035       108 MVVGETQI-LGQVKNA----YKVAQEEKTVGK-VLERLFQKAFSVGK-RVRTETDISAGAVSISSA--------AVELAE  172 (417)
T ss_pred             hhcCChHH-HHHHHHH----HHHHHHcCCchH-HHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHH--------HHHHHH
Confidence            44444444 8999888    566766666654 35688998887765 3322   2 222332211        111 11


Q ss_pred             hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHH-HHHHcCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         310 RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLK-TAKEMGADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       310 ~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      +.....++.+++|+|+|.+|..++++++..|+.+|++++|+.++.+ .++++|.. .++.      ++..+.+      .
T Consensus       173 ~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~------~~l~~~l------~  239 (417)
T TIGR01035       173 RIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF------EDLEEYL------A  239 (417)
T ss_pred             HHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH------HHHHHHH------h
Confidence            2233356789999999999999999999999888999999988765 55677764 3332      3333333      2


Q ss_pred             CCceEEEcccchhh
Q psy1413         389 QPDKTIDCSGIEST  402 (408)
Q Consensus       389 ~~d~i~d~~g~~~~  402 (408)
                      ++|+||+|+|.+..
T Consensus       240 ~aDvVi~aT~s~~~  253 (417)
T TIGR01035       240 EADIVISSTGAPHP  253 (417)
T ss_pred             hCCEEEECCCCCCc
Confidence            68999999987765

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.97  E-value=6.5e-06  Score=77.80  Aligned_cols=224  Identities=20%  Similarity=0.259  Sum_probs=150.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----------CcccccCCcce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----------EFRNVCLSPIL   69 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----------~~~~~~~~~~~   69 (408)
                      |.++++|++|++... +... .....|.++|||++|+|+++|+++..+++||+|....           ++...+...++
T Consensus        34 v~~~~i~~~d~~~~~-~~~~-~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~  111 (326)
T cd08272          34 VHASGVNPLDTKIRR-GGAA-ARPPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLA  111 (326)
T ss_pred             EEEEecCHHHHHHhC-CCCC-CCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcc
Confidence            468999999999874 3221 2234578899999999999999999999999999754           23344555666


Q ss_pred             eccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCcc-------------------
Q psy1413          70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHEA-------------------  128 (408)
Q Consensus        70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~~-------------------  128 (408)
                      ..|+++++.+.+.++....+++........+ .+++++|+| .|.+|++++++++.+|.+.                   
T Consensus       112 ~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~  191 (326)
T cd08272         112 LKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASSEKAAFARSLGADP  191 (326)
T ss_pred             cCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEechHHHHHHHHcCCCE
Confidence            7777776644444444333333211111122 478888887 7899998888877766643                   


Q ss_pred             ---------------------eeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC---
Q psy1413         129 ---------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA---  182 (408)
Q Consensus       129 ---------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~---  182 (408)
                                           +.++++++...  +.+++++++|+++.+|... .  ..+.....+++++.+.....   
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~  268 (326)
T cd08272         192 IIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLLPLL  268 (326)
T ss_pred             EEecchhHHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEcccccc
Confidence                                 22333333221  4678999999999998664 2  22333347788877765321   


Q ss_pred             ---------CcHHHHHHHHHcCCCCCCCcee-eeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         183 ---------NDYPIALAMVASGKVDVKKLIT-HNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       183 ---------~~~~~~~~l~~~g~~~~~~~i~-~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                               ..++++++++.++.++.  +++ +.|++++++++|+.+.+++. ..|++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~  325 (326)
T cd08272         269 TGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSA-RGKIVID  325 (326)
T ss_pred             cccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCc-ccEEEEE
Confidence                     24677888998888753  445 89999999999999987653 5566653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=97.96  E-value=1.5e-05  Score=77.21  Aligned_cols=76  Identities=18%  Similarity=0.253  Sum_probs=62.8

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .-++++++|.|.|++|+.+++.++.+|++ |+++++++.|++.++.+|++.+ +         .++.+      +++|++
T Consensus       199 ~l~GktVvViG~G~IG~~va~~ak~~Ga~-ViV~d~d~~R~~~A~~~G~~~~-~---------~~e~v------~~aDVV  261 (413)
T cd00401         199 MIAGKVAVVAGYGDVGKGCAQSLRGQGAR-VIVTEVDPICALQAAMEGYEVM-T---------MEEAV------KEGDIF  261 (413)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEECChhhHHHHHhcCCEEc-c---------HHHHH------cCCCEE
Confidence            46889999999999999999999999996 8889999999999999998543 1         11222      368999


Q ss_pred             EEcccchhhhhhc
Q psy1413         394 IDCSGIESTIKLG  406 (408)
Q Consensus       394 ~d~~g~~~~~~~~  406 (408)
                      |+|+|....++.+
T Consensus       262 I~atG~~~~i~~~  274 (413)
T cd00401         262 VTTTGNKDIITGE  274 (413)
T ss_pred             EECCCCHHHHHHH
Confidence            9999998887754

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=97.96  E-value=4.2e-05  Score=64.94  Aligned_cols=84  Identities=30%  Similarity=0.252  Sum_probs=64.7

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC--hhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHh-cCCC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDIL--EHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELL-QGEQ  389 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~--~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~-~~~~  389 (408)
                      +++||+|+ +++|+.+++.+...|+++|++++|+  .++.+.    +++.+....+-..|..+.+++++.+.++. ....
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            37899999 9999999999999999999999998  444433    34456544444456667788888888876 3468


Q ss_pred             CceEEEcccchh
Q psy1413         390 PDKTIDCSGIES  401 (408)
Q Consensus       390 ~d~i~d~~g~~~  401 (408)
                      +|++|+|.|...
T Consensus        81 ld~li~~ag~~~   92 (167)
T PF00106_consen   81 LDILINNAGIFS   92 (167)
T ss_dssp             ESEEEEECSCTT
T ss_pred             cccccccccccc
Confidence            999999999754

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.95  E-value=7.6e-05  Score=65.97  Aligned_cols=85  Identities=28%  Similarity=0.320  Sum_probs=65.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC-CeEEecCCCCChHHHHHHHHHHhcC-CCCc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA-DATVLIDRNHSLEEISTHIIELLQG-EQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga-~~~i~~~~~~~~~~~~~~~~~~~~~-~~~d  391 (408)
                      .++.++|+|+ +|+|...++.+...|++ |++..|+.++++.+ .+++. ....-.-|..+.+++++.+..+... ..+|
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~-vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAK-VVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCe-EEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            3478999999 99999999999999997 99999999999876 66773 2222223344567777888777653 5699


Q ss_pred             eEEEcccchh
Q psy1413         392 KTIDCSGIES  401 (408)
Q Consensus       392 ~i~d~~g~~~  401 (408)
                      +.+|..|...
T Consensus        84 iLvNNAGl~~   93 (246)
T COG4221          84 ILVNNAGLAL   93 (246)
T ss_pred             EEEecCCCCc
Confidence            9999999653

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=97.95  E-value=3.1e-06  Score=79.36  Aligned_cols=217  Identities=22%  Similarity=0.327  Sum_probs=145.0

Q ss_pred             CCeeeecccchhhhhcCCCC-CCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCccee
Q psy1413           1 MHCVGICGSDVHYLTHGQIG-DFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILR   70 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~-~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~   70 (408)
                      |.+++||++|++.+. +... .....+|.++|||++|+|+++|++++.+++||+|+..+         ++.......++.
T Consensus        34 v~~~~i~~~d~~~~~-g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~  112 (309)
T cd05289          34 VHAAGVNPVDLKIRE-GLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELAL  112 (309)
T ss_pred             EEEeeCCHHHHHHhc-CCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhcc
Confidence            458999999999874 3221 11235588999999999999999999999999999765         122344445566


Q ss_pred             ccceeeecccccCCCCCCcceEEEEeee-eecCCeEEEEcc-CccccccccccccccCcc--------------------
Q psy1413          71 RRFSLRFREQKPIEDPDDHEVLLEMHCV-GICGSDVHYLTH-GQIGDFRLSDPMIVGHEA--------------------  128 (408)
Q Consensus        71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~-~~~g~~vlv~g~-G~vG~~~i~~a~~~G~~~--------------------  128 (408)
                      .|+++++...+.++....+++....... ...+++++|+|+ |.+|++++++++..|...                    
T Consensus       113 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~  192 (309)
T cd05289         113 KPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAANADFLRSLGADEV  192 (309)
T ss_pred             CCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecchhHHHHHHcCCCEE
Confidence            6766665444433333333322111111 124788999884 889988887777666542                    


Q ss_pred             -----------------eeEEEccCch--HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecC--CCcHHH
Q psy1413         129 -----------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY--ANDYPI  187 (408)
Q Consensus       129 -----------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~--~~~~~~  187 (408)
                                       +.++++++..  ...+++++++|+++.+|.......    ....+++++......  ...+++
T Consensus       193 ~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  268 (309)
T cd05289         193 IDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAE  268 (309)
T ss_pred             EeCCCCchhhccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHH
Confidence                             2223333322  156889999999999997544221    334455655554332  356888


Q ss_pred             HHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         188 ALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       188 ~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                      ++++++++.++  +++++.|++++++++|+.+.+++.
T Consensus       269 ~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~  303 (309)
T cd05289         269 LAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHA  303 (309)
T ss_pred             HHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCC
Confidence            99999998865  458899999999999999987653

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.93  E-value=6.4e-05  Score=71.60  Aligned_cols=84  Identities=23%  Similarity=0.279  Sum_probs=64.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcC-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQG-EQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|++++++.+    ++.|.+..+...|..+.+++++.+.++... .+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~-Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGAR-LVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4578999999 99999999999999997 88899998877543    345665544445555667777776665432 57


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        85 iD~lVnnAG~~   95 (330)
T PRK06139         85 IDVWVNNVGVG   95 (330)
T ss_pred             CCEEEECCCcC
Confidence            99999999853

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.92  E-value=1.7e-05  Score=75.40  Aligned_cols=227  Identities=19%  Similarity=0.183  Sum_probs=153.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      +.++|+|++|++.+. +.... ...+|.++|||++|+|+.+|+++.++++||+|+...      ++.......++..|+.
T Consensus        33 v~~~~i~~~d~~~~~-g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~  110 (337)
T cd08275          33 VEACGLNFADLMARQ-GLYDS-APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDG  110 (337)
T ss_pred             EEEEecCHHHHHHHC-CCCCC-CCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecCCCeeeeEEEecHHHeEECCCC
Confidence            357899999999874 33221 234578899999999999999999999999998753      2334455567777887


Q ss_pred             eeecccccCCCCCCcceEEEEeeee-ecCCeEEEEcc-Cccccccccccccc-cC-------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTH-GQIGDFRLSDPMIV-GH-------------------------  126 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~-G~vG~~~i~~a~~~-G~-------------------------  126 (408)
                      +++.+.+.++.+..+++........ ..+++++|+|+ |.+|++++++++.+ +.                         
T Consensus       111 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  190 (337)
T cd08275         111 MSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDY  190 (337)
T ss_pred             CCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeCCHHHHHHHHHcCCcEEeeC
Confidence            7764444444444444322111111 24788999885 88888877766655 21                         


Q ss_pred             ---------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-----------------cccCHHHHHhcC
Q psy1413         127 ---------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-----------------VKIPLVLTMTKE  172 (408)
Q Consensus       127 ---------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-----------------~~~~~~~~~~~~  172 (408)
                                     .++.+++++|...  ..+++++++|+++.+|.....                 ..++...++.++
T Consensus       191 ~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (337)
T cd08275         191 RTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISEN  270 (337)
T ss_pred             CCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcC
Confidence                           1233444444322  568899999999999965421                 122334567888


Q ss_pred             cEEEEeecC----C-----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         173 IDIRGVFRY----A-----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       173 ~~l~g~~~~----~-----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +++.+....    .     ..+.++++++.++.+.+  +.++.|++++++++++.+.+++. ..|++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~kvv~~  336 (337)
T cd08275         271 KSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP--KIDSVFPFEEVGEAMRRLQSRKN-IGKVVLT  336 (337)
T ss_pred             ceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC--ceeeEEcHHHHHHHHHHHHcCCC-cceEEEe
Confidence            888887532    1     13677888898888654  47889999999999999987653 4566554

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.88  E-value=1.9e-05  Score=78.39  Aligned_cols=105  Identities=17%  Similarity=0.266  Sum_probs=81.3

Q ss_pred             ecCCeEEEEccCccccccccccccccC-----------------------------------------------------
Q psy1413         100 ICGSDVHYLTHGQIGDFRLSDPMIVGH-----------------------------------------------------  126 (408)
Q Consensus       100 ~~g~~vlv~g~G~vG~~~i~~a~~~G~-----------------------------------------------------  126 (408)
                      ..+++|+|+|+|.+|+.+++.++.+|+                                                     
T Consensus       163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~  242 (509)
T PRK09424        163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALF  242 (509)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHH
Confidence            458999999999999999887776664                                                     


Q ss_pred             -----cceeEEEccCc---------hHHHHhhccCCcEEEEEccC-CCC--cccCHHHHHh-cCcEEEEeecCCCcHH-H
Q psy1413         127 -----EASGIVSKVGA---------KVKHLKATRPGGCLVIVGAG-SQD--VKIPLVLTMT-KEIDIRGVFRYANDYP-I  187 (408)
Q Consensus       127 -----~~~~vv~~~g~---------~~~~~~~l~~gG~iv~~G~~-~~~--~~~~~~~~~~-~~~~l~g~~~~~~~~~-~  187 (408)
                           ++|.+|++++.         ..++++.+++||+++.+|.. .++  .+++...++. +++++.|.++.+..++ .
T Consensus       243 ~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~~  322 (509)
T PRK09424        243 AEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPTQ  322 (509)
T ss_pred             HhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHHH
Confidence                 13455666653         24789999999999999985 343  4444455665 8999999998886665 5


Q ss_pred             HHHHHHcCCCCCCCcee
Q psy1413         188 ALAMVASGKVDVKKLIT  204 (408)
Q Consensus       188 ~~~l~~~g~~~~~~~i~  204 (408)
                      +.+++.++.+++.++++
T Consensus       323 As~lla~~~i~l~~lIt  339 (509)
T PRK09424        323 SSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             HHHHHHhCCccHHHHhc
Confidence            99999999998877766

>smart00829 PKS_ER Enoylreductase

Probab=97.84  E-value=8.8e-06  Score=75.25  Aligned_cols=214  Identities=17%  Similarity=0.227  Sum_probs=145.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----CcccccCCcceecccee
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----EFRNVCLSPILRRRFSL   75 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----~~~~~~~~~~~~~p~~~   75 (408)
                      |.++++|++|++.+. +.   +  +.|.++|||++|+|+++|++++.+++||+|....     ++...+...++..|+++
T Consensus         4 v~~~~i~~~d~~~~~-g~---~--~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~p~~~   77 (288)
T smart00829        4 VRAAGLNFRDVLIAL-GL---L--PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARLVVPIPDGL   77 (288)
T ss_pred             EEEEecCHHHHHHhc-CC---C--CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHHeEECCCCC
Confidence            468999999999884 32   2  2467899999999999999999999999998653     33455666778888888


Q ss_pred             eecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCcc-------------------------
Q psy1413          76 RFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHEA-------------------------  128 (408)
Q Consensus        76 ~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~~-------------------------  128 (408)
                      ++.+.+.++....+++........ ..+++++|.| .|.+|++++++++.+|+..                         
T Consensus        78 ~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~  157 (288)
T smart00829       78 SFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIFS  157 (288)
T ss_pred             CHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhheee
Confidence            775555544443333322111111 2477888887 7899988888777666532                         


Q ss_pred             -------------------eeEEEccCch--HHHHhhccCCcEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----
Q psy1413         129 -------------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----  181 (408)
Q Consensus       129 -------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----  181 (408)
                                         +.++++++..  ...+++++++|+++.+|....  ...++... +.+++++.+....    
T Consensus       158 ~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  236 (288)
T smart00829      158 SRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEE  236 (288)
T ss_pred             CCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhc
Confidence                               2223333321  146788999999999996542  23334333 3556666554321    


Q ss_pred             -----CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCC
Q psy1413         182 -----ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGA  223 (408)
Q Consensus       182 -----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~  223 (408)
                           .+.+++++++++++++++.  ..+.|+++++.++++.+..+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  281 (288)
T smart00829      237 GPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGK  281 (288)
T ss_pred             ChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCC
Confidence                 1346778899999987653  568899999999999998864

Enoylreductase in Polyketide synthases.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.82  E-value=7.1e-05  Score=61.39  Aligned_cols=74  Identities=22%  Similarity=0.378  Sum_probs=56.0

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCC--eEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGAD--ATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~--~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .+.+++|+|+|+.|+.++..+..+|+++|.++.|+.+|.+.+ ++++..  ..+++      +++.+.+      ..+|+
T Consensus        11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~------~~~~~~~------~~~Di   78 (135)
T PF01488_consen   11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPL------EDLEEAL------QEADI   78 (135)
T ss_dssp             TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG------GGHCHHH------HTESE
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeH------HHHHHHH------hhCCe
Confidence            578999999999999999999999999999999999988766 556432  24444      3333222      36899


Q ss_pred             EEEcccchh
Q psy1413         393 TIDCSGIES  401 (408)
Q Consensus       393 i~d~~g~~~  401 (408)
                      ||+|++...
T Consensus        79 vI~aT~~~~   87 (135)
T PF01488_consen   79 VINATPSGM   87 (135)
T ss_dssp             EEE-SSTTS
T ss_pred             EEEecCCCC
Confidence            999998763

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.82  E-value=2.3e-05  Score=74.00  Aligned_cols=227  Identities=22%  Similarity=0.300  Sum_probs=151.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----------CcccccCCcce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----------EFRNVCLSPIL   69 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----------~~~~~~~~~~~   69 (408)
                      |.++++|++|+... .+..+. ...+|.++|||++|+|+.+|+++..+++||+|...+           ++...+...++
T Consensus        34 v~~~~~~~~d~~~~-~~~~~~-~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~  111 (328)
T cd08268          34 VEAIGLNRADAMFR-RGAYIE-PPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVV  111 (328)
T ss_pred             EEEEecChHHhhee-ccccCC-CCCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcE
Confidence            45899999999887 333221 235588999999999999999999999999998653           23345556677


Q ss_pred             eccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCc--------------------
Q psy1413          70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHE--------------------  127 (408)
Q Consensus        70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~--------------------  127 (408)
                      ..|+++++.+.+.++.+..+++........ ..++.++|+| .|++|+.++++++..|++                    
T Consensus       112 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~  191 (328)
T cd08268         112 KLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAA  191 (328)
T ss_pred             eCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCC
Confidence            778777764445555444444322111111 2467888888 488998887777766653                    


Q ss_pred             ----------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC
Q psy1413         128 ----------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA  182 (408)
Q Consensus       128 ----------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~  182 (408)
                                            ++.++++.+...  +.+++++++|+++.+|.... ...++....+.+++++.+.....
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (328)
T cd08268         192 HVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDE  271 (328)
T ss_pred             EEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEeccc
Confidence                                  223333333321  46789999999999996543 33455555678888888764321


Q ss_pred             -----Cc----HHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         183 -----ND----YPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       183 -----~~----~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                           .+    ++.+.+++.++.+.+  +.++.|+++++.++++.+.+++. ..|++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~  327 (328)
T cd08268         272 ITLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQ-IGKIVVT  327 (328)
T ss_pred             ccCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCC-CceEEEe
Confidence                 22    444556676777654  47888999999999999887543 3455543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.81  E-value=0.00017  Score=66.40  Aligned_cols=84  Identities=21%  Similarity=0.267  Sum_probs=61.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-Hc----CCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EM----GADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~----ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++++|+.++++.+. ++    +....+..-|..+.+++++.+.++....+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGAD-VILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            3678999999 99999999999999997 888999877765442 22    43333333455566777777776654457


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|+++++.|..
T Consensus        86 iD~lv~nag~~   96 (263)
T PRK08339         86 PDIFFFSTGGP   96 (263)
T ss_pred             CcEEEECCCCC
Confidence            99999999863

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.79  E-value=5.5e-05  Score=74.49  Aligned_cols=89  Identities=22%  Similarity=0.380  Sum_probs=64.6

Q ss_pred             hhhhhhhhhhccC----cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHH-HHHHcCCCeEEecCCCCChH
Q psy1413         301 PLSVGVHACRRAG----VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLK-TAKEMGADATVLIDRNHSLE  375 (408)
Q Consensus       301 ~~~~~~~~~~~~~----~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~  375 (408)
                      +.++++.++....    -.++.+++|+|+|.+|+.+++.++.+|+.+|++++|+.++.+ .++++|.+ +++.      +
T Consensus       162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~------~  234 (423)
T PRK00045        162 AVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL------D  234 (423)
T ss_pred             CcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH------H
Confidence            4555555553322    256789999999999999999999999988999999988865 55777764 3332      3


Q ss_pred             HHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         376 EISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       376 ~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      +..+.+      .++|+||+|+|.+.+
T Consensus       235 ~~~~~l------~~aDvVI~aT~s~~~  255 (423)
T PRK00045        235 ELPEAL------AEADIVISSTGAPHP  255 (423)
T ss_pred             HHHHHh------ccCCEEEECCCCCCc
Confidence            333322      368999999997765

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.77  E-value=0.00016  Score=67.83  Aligned_cols=84  Identities=24%  Similarity=0.309  Sum_probs=61.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++.  ....-..|..+.+++++.+.++.. ..++
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAK-LALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999 99999999999999997 88899998877654 44542  222212444556777776666543 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|++.|..
T Consensus        87 d~vI~nAG~~   96 (296)
T PRK05872         87 DVVVANAGIA   96 (296)
T ss_pred             CEEEECCCcC
Confidence            9999999963

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.77  E-value=0.00014  Score=62.32  Aligned_cols=85  Identities=24%  Similarity=0.266  Sum_probs=61.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC---CCeEEecCCCCChHHHHHHHHHHhcC-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMG---ADATVLIDRNHSLEEISTHIIELLQG-EQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~~-~~~  390 (408)
                      -+.|+||+|| .|+|+.+++-...+|-+ ||+..|++++++++++.-   ...+-|..|   .+..++.+..+... -..
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~-VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNT-VIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCE-EEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCCch
Confidence            3679999998 99999999999999987 999999999999987743   344545444   23333333333322 367


Q ss_pred             ceEEEcccchhhhh
Q psy1413         391 DKTIDCSGIESTIK  404 (408)
Q Consensus       391 d~i~d~~g~~~~~~  404 (408)
                      ++++|+.|.....+
T Consensus        80 NvliNNAGIqr~~d   93 (245)
T COG3967          80 NVLINNAGIQRNED   93 (245)
T ss_pred             heeeecccccchhh
Confidence            99999999765444

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.75  E-value=1.3e-05  Score=75.58  Aligned_cols=220  Identities=22%  Similarity=0.249  Sum_probs=143.9

Q ss_pred             CCeeeecccchhhhhcCCCCC-CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCccee
Q psy1413           1 MHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILR   70 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~-~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~   70 (408)
                      +.++++|++|++.+. |.++. ....+|.++|||++|+|.++|+++.++++||||+...         .+.......++.
T Consensus        33 v~~~~i~~~d~~~~~-g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~  111 (319)
T cd08267          33 VHAASVNPVDWKLRR-GPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAK  111 (319)
T ss_pred             EEEeeCCHHHHHHHc-CCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCCCCceeeEEEEechhheEE
Confidence            358999999999874 32211 1234577899999999999999999999999998754         223455566777


Q ss_pred             ccceeeecccccCCCCCCcceEEEEeee-eecCCeEEEEcc-CccccccccccccccCcc--------------------
Q psy1413          71 RRFSLRFREQKPIEDPDDHEVLLEMHCV-GICGSDVHYLTH-GQIGDFRLSDPMIVGHEA--------------------  128 (408)
Q Consensus        71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~-~~~g~~vlv~g~-G~vG~~~i~~a~~~G~~~--------------------  128 (408)
                      .|+++++++.+.++.+..+++....... ...+++++|+|+ |++|++++++++.+|++.                    
T Consensus       112 ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~g~~~~  191 (319)
T cd08267         112 KPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTRNAELVRSLGADEV  191 (319)
T ss_pred             CCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCCEe
Confidence            8887777555555544444432211111 124788999985 889988888777766542                    


Q ss_pred             ------------------eeEEEccCch-H---HHHhhccCCcEEEEEccCCCCcccC-----HHH-HHhcCcEEEEeec
Q psy1413         129 ------------------SGIVSKVGAK-V---KHLKATRPGGCLVIVGAGSQDVKIP-----LVL-TMTKEIDIRGVFR  180 (408)
Q Consensus       129 ------------------~~vv~~~g~~-~---~~~~~l~~gG~iv~~G~~~~~~~~~-----~~~-~~~~~~~l~g~~~  180 (408)
                                        +.++++++.. .   .....++++|+++.+|.........     ... ...+.+.......
T Consensus       192 ~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (319)
T cd08267         192 IDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP  271 (319)
T ss_pred             ecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecC
Confidence                              2333444321 1   1223389999999999764322211     111 1223333222211


Q ss_pred             CCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCC
Q psy1413         181 YANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGA  223 (408)
Q Consensus       181 ~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~  223 (408)
                      ..+.++++++++++++++  +++++.|++++++++|+.+.+++
T Consensus       272 ~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~i~~a~~~~~~~~  312 (319)
T cd08267         272 NAEDLEQLAELVEEGKLK--PVIDSVYPLEDAPEAYRRLKSGR  312 (319)
T ss_pred             CHHHHHHHHHHHHCCCee--eeeeeEEcHHHHHHHHHHHhcCC
Confidence            136789999999999875  35889999999999999998764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=97.75  E-value=2e-05  Score=73.59  Aligned_cols=219  Identities=18%  Similarity=0.235  Sum_probs=147.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc--------CcccccCCcceecc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP--------EFRNVCLSPILRRR   72 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~--------~~~~~~~~~~~~~p   72 (408)
                      +.++++|++|+..+. +.+. ....+|.++|||++|+|+++|++++++++||+|....        ++...+...++..|
T Consensus        14 v~~~~i~~~d~~~~~-~~~~-~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~p   91 (303)
T cd08251          14 VRAFSLNFGDLLCVR-GLYP-TMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPEDQVVRKP   91 (303)
T ss_pred             EEEeecChHHHHHHC-CCCC-CCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEEccHHHeEECC
Confidence            358899999999874 3222 2235688999999999999999999999999998653        23455566778888


Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCcce---------------------
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHEAS---------------------  129 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~~~---------------------  129 (408)
                      +++++++.+.++....+++... ....+ .+++++|++ .+.+|+..+++++.+|+...                     
T Consensus        92 ~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~  170 (303)
T cd08251          92 ASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVI  170 (303)
T ss_pred             CCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEE
Confidence            8888765666665555544322 12223 467888865 78899998888887776422                     


Q ss_pred             ---------------------eEEEccCchH--HHHhhccCCcEEEEEccCCC--CcccCHHHHH----hcCcEEEEeec
Q psy1413         130 ---------------------GIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ--DVKIPLVLTM----TKEIDIRGVFR  180 (408)
Q Consensus       130 ---------------------~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~--~~~~~~~~~~----~~~~~l~g~~~  180 (408)
                                           .++++++...  ..+++++++|+++.+|....  ...++...+.    ++++++.+...
T Consensus       171 ~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (303)
T cd08251         171 NYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLL  250 (303)
T ss_pred             eCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhh
Confidence                                 2222222111  46789999999999986542  2233433322    22222222221


Q ss_pred             CC-----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         181 YA-----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       181 ~~-----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                      ..     +.+.+++++++++.+++  +.++.|++++++++++.+.+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~  297 (303)
T cd08251         251 LDPEFIADYQAEMVSLVEEGELRP--TVSRIFPFDDIGEAYRYLSDREN  297 (303)
T ss_pred             hCHHHHHHHHHHHHHHHHCCCccC--CCceEEcHHHHHHHHHHHHhCCC
Confidence            11     34777889999998763  47899999999999999987653

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.70  E-value=2.2e-05  Score=74.26  Aligned_cols=226  Identities=19%  Similarity=0.249  Sum_probs=148.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCcceec
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILRR   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~~   71 (408)
                      |.++++|++|++...... .  ...+|.++|||++|+|+.+|+++..+++||+|...+         .+.......++..
T Consensus        34 v~~~~i~~~d~~~~~~~~-~--~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~i  110 (325)
T cd08271          34 VHAAGLNPVDWKVIAWGP-P--AWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPL  110 (325)
T ss_pred             EEEEecCHHHHHHhcCCC-C--CCCCCcccccceEEEEEEeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEEC
Confidence            358999999999874321 1  123478899999999999999999999999999764         2334555667777


Q ss_pred             cceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEcc-CccccccccccccccCc----------------------
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTH-GQIGDFRLSDPMIVGHE----------------------  127 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~-G~vG~~~i~~a~~~G~~----------------------  127 (408)
                      |+++++.+.+.++.+..+++........ ..+++++|+|+ |.+|++.+++++..|..                      
T Consensus       111 p~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~  190 (325)
T cd08271         111 PDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCSKRNFEYVKSLGADHVI  190 (325)
T ss_pred             CCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEEcHHHHHHHHHcCCcEEe
Confidence            8877775555555554444422111112 25788999885 67888887777666653                      


Q ss_pred             -------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCH--HHHHhcCcEEEEeecCC--
Q psy1413         128 -------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPL--VLTMTKEIDIRGVFRYA--  182 (408)
Q Consensus       128 -------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~--~~~~~~~~~l~g~~~~~--  182 (408)
                                         ++.+++++++..  ..+++++++|+++.+|..........  ..+.++++++.+.....  
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (325)
T cd08271         191 DYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDP  270 (325)
T ss_pred             cCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccch
Confidence                               223333333221  46889999999999975433211111  12344555555443221  


Q ss_pred             -------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         183 -------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       183 -------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                             +.+.+++++++++++++  +.++.|+++++.++++.+.++. ...|++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~-~~~kiv~~  324 (325)
T cd08271         271 AAWQDLRYAGEELLELLAAGKLEP--LVIEVLPFEQLPEALRALKDRH-TRGKIVVT  324 (325)
T ss_pred             hhHHHHHHHHHHHHHHHHCCCeee--ccceEEcHHHHHHHHHHHHcCC-ccceEEEE
Confidence                   23577889999988764  3678899999999999998764 34455543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.00019  Score=66.66  Aligned_cols=82  Identities=21%  Similarity=0.221  Sum_probs=61.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc--CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ--GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~~~d~  392 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++++.+.+.+...+  .-|..+.+++++.+.++..  +..+|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~-Vi~~~r~~~~~~~l~~~~~~~~--~~Dl~d~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWR-VFATCRKEEDVAALEAEGLEAF--QLDYAEPESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHCCceEE--EccCCCHHHHHHHHHHHHHHcCCCccE
Confidence            4578999999 99999999999999997 8999999888887776664432  2233445666666665532  247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|++.|..
T Consensus        80 li~~Ag~~   87 (277)
T PRK05993         80 LFNNGAYG   87 (277)
T ss_pred             EEECCCcC
Confidence            99998743

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.68  E-value=0.00032  Score=64.52  Aligned_cols=83  Identities=22%  Similarity=0.195  Sum_probs=59.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++++...|++ |++++|+.++.+.+.+    .+....+..-|..+.+++.+.+.++.. ..+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGAD-VLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999 99999999999999995 8889998777654422    243333323444456667666666533 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|+++|.
T Consensus        88 id~vi~~Ag~   97 (263)
T PRK07814         88 LDIVVNNVGG   97 (263)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.68  E-value=1.9e-05  Score=72.41  Aligned_cols=190  Identities=26%  Similarity=0.378  Sum_probs=133.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      |.++++|++|++.+. +... ....+|.++|||++|+|+++|++++.|++||+|+..+..                    
T Consensus         6 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (271)
T cd05188           6 VEAAGLCGTDLHIRR-GGYP-PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGILGE   83 (271)
T ss_pred             EEEEEecchhHHHHc-CCCC-cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCEecc
Confidence            468999999999884 3222 234568899999999999999999999999999976522                    


Q ss_pred             ---------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccccC----
Q psy1413          61 ---------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIVGH----  126 (408)
Q Consensus        61 ---------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~G~----  126 (408)
                               ...+...++..|+++++.+.+.++.++.+++........ ..+++++|+|+|++|++++++++..|.    
T Consensus        84 ~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~~v~~  163 (271)
T cd05188          84 GLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIV  163 (271)
T ss_pred             ccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence                     233344556667777765555555555555422111122 357889999977799888877766553    


Q ss_pred             -------------------------------------cceeEEEccCc-h--HHHHhhccCCcEEEEEccCCCCccc-CH
Q psy1413         127 -------------------------------------EASGIVSKVGA-K--VKHLKATRPGGCLVIVGAGSQDVKI-PL  165 (408)
Q Consensus       127 -------------------------------------~~~~vv~~~g~-~--~~~~~~l~~gG~iv~~G~~~~~~~~-~~  165 (408)
                                                           .++.++++++. .  ...+++++++|+++.+|........ ..
T Consensus       164 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~  243 (271)
T cd05188         164 TDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDDL  243 (271)
T ss_pred             EcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCCCcccH
Confidence                                                 23445555554 2  1568899999999999976654333 35


Q ss_pred             HHHHhcCcEEEEeecCC-CcHHHHHHHH
Q psy1413         166 VLTMTKEIDIRGVFRYA-NDYPIALAMV  192 (408)
Q Consensus       166 ~~~~~~~~~l~g~~~~~-~~~~~~~~l~  192 (408)
                      ..++.+++++.+...+. .+++++++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (271)
T cd05188         244 RRLLFKELTIIGSTGGTREDFEEALDLL  271 (271)
T ss_pred             HHHHhcceEEEEeecCCHHHHHHHHhhC
Confidence            56789999999998876 6788887763

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.68  E-value=0.00031  Score=63.78  Aligned_cols=84  Identities=29%  Similarity=0.273  Sum_probs=60.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      ++.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+...+..+.++..+.+..+.. ..++|+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGAR-VAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            3578999999 99999999999999997 88888887766544 44565443333344455666665555433 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        84 vi~~ag~~   91 (249)
T PRK06500         84 VFINAGVA   91 (249)
T ss_pred             EEECCCCC
Confidence            99999853

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.68  E-value=0.00037  Score=64.02  Aligned_cols=84  Identities=19%  Similarity=0.204  Sum_probs=60.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-c--CCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-M--GADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~--ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ++.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.. +  +....+...|..+.+++++.+..+...+++|
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGAR-LLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            4578999999 99999999999999997 8999998877665532 2  3222222334445566666665554445799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      .+|+++|..
T Consensus        83 ~lv~~ag~~   91 (263)
T PRK09072         83 VLINNAGVN   91 (263)
T ss_pred             EEEECCCCC
Confidence            999998864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.67  E-value=0.00035  Score=63.52  Aligned_cols=83  Identities=19%  Similarity=0.273  Sum_probs=59.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      +++++||+|+ |++|+.+++.+...|++ |++++++..+.+.+    ++.+........|..+.+++.+.+..+.. ..+
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAK-LALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999 99999999999999997 88888887765443    33454433333344455666666666543 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|.+|+++|.
T Consensus        83 id~vi~~ag~   92 (253)
T PRK08217         83 LNGLINNAGI   92 (253)
T ss_pred             CCEEEECCCc
Confidence            8999999985

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00038  Score=63.52  Aligned_cols=84  Identities=20%  Similarity=0.179  Sum_probs=62.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|++++++.+    ++.+....+...|..+.+++++.+.++.. ..+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAK-VVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            3578999999 99999999999999997 88889988776544    23354444434455566777777776643 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        84 id~li~~ag~~   94 (254)
T PRK07478         84 LDIAFNNAGTL   94 (254)
T ss_pred             CCEEEECCCCC
Confidence            99999999863

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.67  E-value=0.00022  Score=70.73  Aligned_cols=81  Identities=30%  Similarity=0.353  Sum_probs=60.3

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeE-EecCCC----------CChHHHHHHHHH
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT-VLIDRN----------HSLEEISTHIIE  383 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~-i~~~~~----------~~~~~~~~~~~~  383 (408)
                      .++++++|+|+|.+|+.++++++.+|++ |++++++.++++.++++|++.+ ++..+.          .+ ++..+...+
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA~-V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s-~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGAI-VRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMS-EEFIAAEME  239 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecC-HHHHHHHHH
Confidence            4568999999999999999999999998 9999999999999999998763 332110          01 122222233


Q ss_pred             Hhc--CCCCceEEEcc
Q psy1413         384 LLQ--GEQPDKTIDCS  397 (408)
Q Consensus       384 ~~~--~~~~d~i~d~~  397 (408)
                      ...  .+++|++|+|+
T Consensus       240 ~~~e~~~~~DIVI~Ta  255 (511)
T TIGR00561       240 LFAAQAKEVDIIITTA  255 (511)
T ss_pred             HHHHHhCCCCEEEECc
Confidence            222  36799999999

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08324 short chain dehydrogenase; Validated

Probab=97.66  E-value=0.00024  Score=74.43  Aligned_cols=119  Identities=25%  Similarity=0.262  Sum_probs=77.8

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDI  349 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~  349 (408)
                      -++++|..+++..++.+ +..+.+++....        .......+++++||+|+ |++|+.+++.+...|++ |++++|
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~--------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~-Vvl~~r  454 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR--------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGAC-VVLADL  454 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhc--------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCE-EEEEeC
Confidence            45667777776666665 445555443211        01122336789999998 99999999999999996 999999


Q ss_pred             ChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCCceEEEcccc
Q psy1413         350 LEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQPDKTIDCSGI  399 (408)
Q Consensus       350 ~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~d~~g~  399 (408)
                      +.++.+.+ ++++.  ...+...|..+.+++.+.+.++.. ..++|++|+++|.
T Consensus       455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~  508 (681)
T PRK08324        455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGI  508 (681)
T ss_pred             CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            98877654 33443  222222334455666666665532 3479999999984

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.00041  Score=63.69  Aligned_cols=83  Identities=19%  Similarity=0.207  Sum_probs=61.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+..-|..+.+++++.+.++.. ...+|+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGAR-VAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            3578999999 99999999999999996 89899988766554 44554333334455566777777766543 247999


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      +|++.|.
T Consensus        84 lv~~ag~   90 (261)
T PRK08265         84 LVNLACT   90 (261)
T ss_pred             EEECCCC
Confidence            9999885

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.64  E-value=0.00037  Score=64.00  Aligned_cols=83  Identities=23%  Similarity=0.229  Sum_probs=59.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .+++++|+|+ |++|..+++.+...|++ |++++|+.++++.+++ .+.....-..|..+.++..+.++++.. ..++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGAR-VAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            4678999999 99999999999999997 8888998877766654 343222222344445666666665533 247999


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      +|++.|.
T Consensus        83 li~~Ag~   89 (262)
T TIGR03325        83 LIPNAGI   89 (262)
T ss_pred             EEECCCC
Confidence            9999985

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.64  E-value=0.00042  Score=63.66  Aligned_cols=84  Identities=23%  Similarity=0.229  Sum_probs=62.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|++++.+.+.+ ++....+-..|..+.+++++.+.++.. ...+|+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGAR-VAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4678999999 99999999999999997 8889998887766543 443223333444556777777776543 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        84 li~~ag~~   91 (263)
T PRK06200         84 FVGNAGIW   91 (263)
T ss_pred             EEECCCCc
Confidence            99999853

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.00045  Score=63.26  Aligned_cols=85  Identities=19%  Similarity=0.218  Sum_probs=60.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+++++|+|+ |++|..+++.+...|+++|++++|+.++.+    .+++.+....+...|..+.+++.+.+..... -.+
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999 999999999999999988888988866554    2334454433333444455666666655432 136


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+|++.|..
T Consensus        85 id~li~~ag~~   95 (260)
T PRK06198         85 LDALVNAAGLT   95 (260)
T ss_pred             CCEEEECCCcC
Confidence            99999999863

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.00047  Score=63.21  Aligned_cols=82  Identities=26%  Similarity=0.234  Sum_probs=59.7

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cC-CCeEEecCCCCChHHHHHHHHHHhc--CCCCce
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MG-ADATVLIDRNHSLEEISTHIIELLQ--GEQPDK  392 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~g-a~~~i~~~~~~~~~~~~~~~~~~~~--~~~~d~  392 (408)
                      +++||+|+ |++|..+++.+...|++ |++++|+.++++.+.+ .+ ....+-.-|..+.+++.+.+..+..  .+++|+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWR-VGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            47999999 99999999999999997 8888998888766633 32 2222223344456777777766543  357999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +++++|..
T Consensus        81 vi~~ag~~   88 (260)
T PRK08267         81 LFNNAGIL   88 (260)
T ss_pred             EEECCCCC
Confidence            99999864

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00059  Score=62.41  Aligned_cols=86  Identities=20%  Similarity=0.196  Sum_probs=59.0

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-HHH----HHHcCC-CeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-LKT----AKEMGA-DATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-~~~----~~~~ga-~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      ..+.++||+|+ |++|+.+++.+...|..+|++++|+.++ ++.    +++.+. ...+..-|..+.+++++.+.++...
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            45678999999 9999999998887863348889998765 432    333343 2223233444556677667666544


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|+++++.|..
T Consensus        86 g~id~li~~ag~~   98 (253)
T PRK07904         86 GDVDVAIVAFGLL   98 (253)
T ss_pred             CCCCEEEEeeecC
Confidence            5799999988864

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.0006  Score=62.60  Aligned_cols=86  Identities=28%  Similarity=0.348  Sum_probs=61.1

Q ss_pred             cCCCCEEEEEec-c-hhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----H-cCCCeE-EecCCCCChHHHHHHHHHHh
Q psy1413         314 VTLGSKVLITGA-G-PIGLVTLLTARALGASRVVITDILEHKLKTAK----E-MGADAT-VLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       314 ~~~~~~~lv~G~-G-~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~-~ga~~~-i~~~~~~~~~~~~~~~~~~~  385 (408)
                      +..++++||+|+ | ++|..+++.+...|++ |++++++.++++...    + +|...+ +...|..+.+++.+.+.++.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGAR-VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            355789999998 7 8999999999999997 888888877655432    2 453332 22344455667777776653


Q ss_pred             c-CCCCceEEEcccch
Q psy1413         386 Q-GEQPDKTIDCSGIE  400 (408)
Q Consensus       386 ~-~~~~d~i~d~~g~~  400 (408)
                      . ..++|++|++.|..
T Consensus        93 ~~~g~id~li~~ag~~  108 (262)
T PRK07831         93 ERLGRLDVLVNNAGLG  108 (262)
T ss_pred             HHcCCCCEEEECCCCC
Confidence            3 24799999999853

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=97.57  E-value=5.8e-05  Score=69.77  Aligned_cols=216  Identities=19%  Similarity=0.210  Sum_probs=146.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----CcccccCCcceecccee
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----EFRNVCLSPILRRRFSL   75 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----~~~~~~~~~~~~~p~~~   75 (408)
                      |.++|+|++|++... +.   . ..+|.++|||++|+|+++|++++.+++||+|....     ++...+...++..|+.+
T Consensus         7 v~~~~~~~~d~~~~~-g~---~-~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~p~~~   81 (293)
T cd05195           7 VKAAGLNFRDVLVAL-GL---L-PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARLVVKIPDSL   81 (293)
T ss_pred             EEEEecCHHHHHHHh-CC---C-CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEecCcccceEEechhheEeCCCCC
Confidence            468999999999884 32   2 24588999999999999999999999999998753     34455666777788877


Q ss_pred             eecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCcc-------------------------
Q psy1413          76 RFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHEA-------------------------  128 (408)
Q Consensus        76 ~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~~-------------------------  128 (408)
                      ++.+...++.+..+++........+ .+++++|+| .|.+|++++++++.+|+..                         
T Consensus        82 ~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~  161 (293)
T cd05195          82 SFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFS  161 (293)
T ss_pred             CHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCcceEee
Confidence            7755554444444433221111112 478888986 7899988888877666532                         


Q ss_pred             -------------------eeEEEccCch--HHHHhhccCCcEEEEEccCCCC--cccCHHHHHhcCcEEEEeec-----
Q psy1413         129 -------------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQD--VKIPLVLTMTKEIDIRGVFR-----  180 (408)
Q Consensus       129 -------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~~--~~~~~~~~~~~~~~l~g~~~-----  180 (408)
                                         +.+++++|..  ...+++++++|+++.+|.....  ..++... +.+++.+.....     
T Consensus       162 ~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  240 (293)
T cd05195         162 SRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLAR  240 (293)
T ss_pred             cCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhh
Confidence                               2223333322  1467889999999999976532  2233322 334555554321     


Q ss_pred             C-----CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         181 Y-----ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       181 ~-----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                      .     .+.+.+++++++++++.  +++++.++++++.++|+.+.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~  287 (293)
T cd05195         241 ERPELLRELLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGKH  287 (293)
T ss_pred             hChHHHHHHHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCCC
Confidence            1     13477888999999875  567888999999999999997653

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.00052  Score=63.38  Aligned_cols=82  Identities=27%  Similarity=0.240  Sum_probs=59.6

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      +.++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++....+ .-|..+.+++.+.+.++.. ..++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGAR-VAIGDLDEALAKETAAELGLVVGG-PLDVTDPASFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhccceEE-EccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999 99999999999999997 88888988877654 444422222 2334456677666666543 2579999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      +++.|..
T Consensus        83 i~~ag~~   89 (273)
T PRK07825         83 VNNAGVM   89 (273)
T ss_pred             EECCCcC
Confidence            9999853

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.00065  Score=62.06  Aligned_cols=85  Identities=16%  Similarity=0.183  Sum_probs=61.0

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      ..+.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+.+    .+.....-..|..+.+++++.+.+... -.
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGAD-VVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            45688999999 99999999999999996 8888988776554422    243333333444556777777766533 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        82 ~~d~vi~~ag~~   93 (258)
T PRK07890         82 RVDALVNNAFRV   93 (258)
T ss_pred             CccEEEECCccC
Confidence            689999999853

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.00068  Score=62.29  Aligned_cols=84  Identities=23%  Similarity=0.196  Sum_probs=59.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----H-cC-CCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----E-MG-ADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~-~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++++.+.    + .+ .....-.-|..+.+++.+.+.++.. .
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGAS-VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF   85 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            3678999999 99999999999999997 888999887765432    2 11 2222223344556777776666543 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++++++|..
T Consensus        86 g~id~li~~Ag~~   98 (265)
T PRK07062         86 GGVDMLVNNAGQG   98 (265)
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999853

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00072  Score=63.30  Aligned_cols=83  Identities=24%  Similarity=0.286  Sum_probs=59.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      +.+++|+|+ |++|..+++.+...|++ |++++|+.++++.+.    +.+.+..+-.-|..+.+++.+.+..+.. ..++
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~-Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGAT-VVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999 99999999999999987 899999987765442    2343333333344455666666665432 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|+++|..
T Consensus       119 d~li~~AG~~  128 (293)
T PRK05866        119 DILINNAGRS  128 (293)
T ss_pred             CEEEECCCCC
Confidence            9999999864

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00063  Score=62.92  Aligned_cols=79  Identities=23%  Similarity=0.143  Sum_probs=59.1

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTID  395 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~d  395 (408)
                      +++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+.+...+  .-|..+.+++++.+.++.. ..++|++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~--~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYE-VWATARKAEDVEALAAAGFTAV--QLDVNDGAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHCCCeEE--EeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            47899999 99999999999999987 8889999888777666554332  1223345677766666533 347999999


Q ss_pred             cccc
Q psy1413         396 CSGI  399 (408)
Q Consensus       396 ~~g~  399 (408)
                      +.|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            9985

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.54  E-value=0.00072  Score=61.91  Aligned_cols=83  Identities=24%  Similarity=0.281  Sum_probs=60.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++++.+.    ..+....+...|..+.+++.+.+.++.. ..+
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGAR-VVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4688999999 99999999999999996 888889877765442    2333333334455566777766666543 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|.+|+++|.
T Consensus        90 id~vi~~ag~   99 (259)
T PRK08213         90 VDILVNNAGA   99 (259)
T ss_pred             CCEEEECCCC
Confidence            9999999885

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.0007  Score=61.73  Aligned_cols=83  Identities=22%  Similarity=0.216  Sum_probs=59.5

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.    +.+....+-.-|..+.+++++.+.++.. ..++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGAN-VVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            468999999 99999999999999996 888998877655432    2333333333344566777777766543 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |.+|++.|..
T Consensus        80 d~lI~~ag~~   89 (252)
T PRK07677         80 DALINNAAGN   89 (252)
T ss_pred             cEEEECCCCC
Confidence            9999999853

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00067  Score=61.89  Aligned_cols=84  Identities=21%  Similarity=0.203  Sum_probs=60.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.    +.+.......-|..+.+++.+.+.++.. ..+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQ-VAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3678999999 99999999999999997 888889877765442    2343332223344556677776666543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|+++++.|..
T Consensus        87 id~lv~~ag~~   97 (253)
T PRK05867         87 IDIAVCNAGII   97 (253)
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00078  Score=61.62  Aligned_cols=83  Identities=17%  Similarity=0.139  Sum_probs=60.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH---HcCCCeEEecCCCCChHHHHHHHHHHhcC-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK---EMGADATVLIDRNHSLEEISTHIIELLQG-EQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~---~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~~  390 (408)
                      .+.++||+|+ |++|..+++.+...|++ +++++|+.++.+..+   +.+....+-..|..+.+++.+.+.++... .++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            3578999999 99999999999999998 777888776654333   34544333345555667777777766442 479


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |.+|+++|.
T Consensus        85 d~vi~~ag~   93 (258)
T PRK08628         85 DGLVNNAGV   93 (258)
T ss_pred             CEEEECCcc
Confidence            999999985

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00074  Score=64.50  Aligned_cols=84  Identities=20%  Similarity=0.174  Sum_probs=62.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.+++|+|+ |++|..+++.+...|++ |++++|++++++.+    ++.|....+-.-|..+.+++++.+.++.. -.+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~-Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~   85 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAK-VVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP   85 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            4578999999 99999999999999997 88889988776543    34565554444455566777776665533 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        86 iD~lInnAg~~   96 (334)
T PRK07109         86 IDTWVNNAMVT   96 (334)
T ss_pred             CCEEEECCCcC
Confidence            99999999853

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.52  E-value=0.00079  Score=61.14  Aligned_cols=83  Identities=24%  Similarity=0.269  Sum_probs=60.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc--CCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM--GADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~--ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .+.++||+|+ |++|..+++.+...|.+ |++++|+.++.+.+ ..+  +....+..-|..+.+++.+.+.+... ..++
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            3568999999 99999999999999998 99999998776554 222  23333334455566777777666522 3479


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |++|++.|.
T Consensus        83 d~vi~~ag~   91 (251)
T PRK07231         83 DILVNNAGT   91 (251)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00086  Score=61.71  Aligned_cols=83  Identities=14%  Similarity=0.192  Sum_probs=60.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      ++.++||+|+ |++|..+++.+...|++ |++++|+.++.+..    .+.+....+..-|..+.+++.+.+.++.. .++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGAN-VAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5679999999 99999999999999998 88899887665432    23343333333444556777777777643 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|++.|.
T Consensus        87 iD~vi~~ag~   96 (264)
T PRK07576         87 IDVLVSGAAG   96 (264)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK06194 hypothetical protein; Provisional

Probab=97.52  E-value=0.00082  Score=62.55  Aligned_cols=83  Identities=23%  Similarity=0.289  Sum_probs=59.7

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH---cCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE---MGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~---~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      +.++||+|+ |++|..+++.+...|++ |++++++.++++.. ++   .+....+-.-|..+.+++++.+..+.. ..++
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMK-LVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999 99999999999999997 88889887665433 22   244433334455566777776666533 2468


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|++.|..
T Consensus        85 d~vi~~Ag~~   94 (287)
T PRK06194         85 HLLFNNAGVG   94 (287)
T ss_pred             CEEEECCCCC
Confidence            9999999864

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00082  Score=62.29  Aligned_cols=84  Identities=27%  Similarity=0.290  Sum_probs=61.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++++.++++.+    ++.|....+...|..+.+++++.+.++.. ..+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGAR-VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999 99999999999999997 88888887766543    23354444444555666777777766533 246


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|++.|..
T Consensus        84 id~li~nAg~~   94 (275)
T PRK05876         84 VDVVFSNAGIV   94 (275)
T ss_pred             CCEEEECCCcC
Confidence            89999999853

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.00059  Score=61.10  Aligned_cols=80  Identities=18%  Similarity=0.084  Sum_probs=59.6

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      .+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+++++-...+ ..|..+.+++++.+.++. ..++|++|++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~~-~~~id~vi~~   78 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQ-VTATVRGPQQDTALQALPGVHIE-KLDMNDPASLDQLLQRLQ-GQRFDLLFVN   78 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCE-EEEEeCCCcchHHHHhccccceE-EcCCCCHHHHHHHHHHhh-cCCCCEEEEc
Confidence            46899999 99999999999999996 99999988777666555422222 234445667777776664 3579999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +|..
T Consensus        79 ag~~   82 (225)
T PRK08177         79 AGIS   82 (225)
T ss_pred             Cccc
Confidence            8864

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.0008  Score=60.48  Aligned_cols=83  Identities=22%  Similarity=0.227  Sum_probs=60.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcC-C-
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQG-E-  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~-  388 (408)
                      .+.+++|+|+ +++|+.+++.+...|++ |++++|+.++++.+    ++.+.....-..|..+.+++++.+.++... . 
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~-V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGAT-LILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999 99999999999999998 88889988776543    334544332223445567777777766432 3 


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      .+|++|++.|.
T Consensus        83 ~iD~li~nag~   93 (227)
T PRK08862         83 APDVLVNNWTS   93 (227)
T ss_pred             CCCEEEECCcc
Confidence            79999999974

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.00085  Score=60.89  Aligned_cols=84  Identities=19%  Similarity=0.245  Sum_probs=59.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcC-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQG-EQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~  389 (408)
                      .+.+++|+|+ |++|+.+++.+...|++ |++++|++++.+.+    ++.+....+..-|..+.+++++.+.++... .+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGAT-VAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3678999999 99999999999999997 88888887765543    223443333334445566776666655432 47


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        85 id~vi~~ag~~   95 (250)
T PRK12939         85 LDGLVNNAGIT   95 (250)
T ss_pred             CCEEEECCCCC
Confidence            99999999863

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.00086  Score=61.44  Aligned_cols=84  Identities=20%  Similarity=0.232  Sum_probs=59.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-Hc-----CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EM-----GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|++++.+.+. ++     +....+-..|..+.+++.+.+.++.. .
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAA-VALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3578999999 99999999999999997 888899877765432 22     22222333444556667766666543 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      +++|.+|+++|..
T Consensus        85 g~id~li~~ag~~   97 (260)
T PRK07063         85 GPLDVLVNNAGIN   97 (260)
T ss_pred             CCCcEEEECCCcC
Confidence            4799999999853

>PRK06182 short chain dehydrogenase; Validated

Probab=97.49  E-value=0.00071  Score=62.55  Aligned_cols=81  Identities=19%  Similarity=0.168  Sum_probs=60.6

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~  394 (408)
                      +.+++|+|+ |++|+.+++.+...|++ |++++|+.++++.+.+.+...+  .-|..+.+++++.+.++.. ..++|++|
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~-V~~~~r~~~~l~~~~~~~~~~~--~~Dv~~~~~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYT-VYGAARRVDKMEDLASLGVHPL--SLDVTDEASIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhCCCeEE--EeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            578999999 99999999999999997 8889999888776655554332  1233456777777766533 34799999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      ++.|..
T Consensus        80 ~~ag~~   85 (273)
T PRK06182         80 NNAGYG   85 (273)
T ss_pred             ECCCcC
Confidence            999854

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.49  E-value=0.00095  Score=60.61  Aligned_cols=84  Identities=20%  Similarity=0.206  Sum_probs=59.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh--HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK--LKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~--~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+...  .+.+++.+.......-|..+.+++.+.+.++.. ..++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGAD-IVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4688999999 99999999999999997 8888876521  233444554433334455556777777766543 24799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      ++++++|..
T Consensus        83 ~li~~ag~~   91 (248)
T TIGR01832        83 ILVNNAGII   91 (248)
T ss_pred             EEEECCCCC
Confidence            999999864

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.00063  Score=62.35  Aligned_cols=85  Identities=20%  Similarity=0.197  Sum_probs=59.3

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCC--eEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGAD--ATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~--~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      -++.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+....  ..+..-|..+.+++.+.+.++.. -.++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGAR-VHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999 99999999999999997 89999987776655432211  12223333445555555554422 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |.+|++.|..
T Consensus        88 d~vi~~ag~~   97 (264)
T PRK12829         88 DVLVNNAGIA   97 (264)
T ss_pred             CEEEECCCCC
Confidence            9999999864

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.00097  Score=60.79  Aligned_cols=84  Identities=25%  Similarity=0.282  Sum_probs=60.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+........|..+.+++.+.+.++.. ..+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAK-VVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999 99999999999999997 88899987765433    33454433333455556677766665532 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|++.|..
T Consensus        85 id~li~~ag~~   95 (253)
T PRK06172         85 LDYAFNNAGIE   95 (253)
T ss_pred             CCEEEECCCCC
Confidence            89999999853

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.00091  Score=63.26  Aligned_cols=84  Identities=23%  Similarity=0.222  Sum_probs=60.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH----c-CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE----M-GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~----~-ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .+.+++|+|+ +++|..+++.+...|++ |++++|+.++.+.+ ++    . +....+..-|..+.+++++.+.++.. .
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~-Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~   91 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAE-VILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG   91 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            3578999999 99999999999999997 88889987765433 22    1 22333333455566777777766543 3


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus        92 ~~iD~li~nAG~~  104 (313)
T PRK05854         92 RPIHLLINNAGVM  104 (313)
T ss_pred             CCccEEEECCccc
Confidence            4799999999864

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.00097  Score=60.65  Aligned_cols=84  Identities=21%  Similarity=0.195  Sum_probs=59.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-c--CCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-M--GADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~--ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .+++++|+|+ |++|..+++.+...|++ |++++|+.++.+...+ .  +....+..-|..+.+++.+.+.++.. ..++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGAR-VVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCe-EEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999 99999999999999987 8888888766544322 2  43333333444556677666665533 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |.+|+++|..
T Consensus        83 d~vi~~ag~~   92 (252)
T PRK06138         83 DVLVNNAGFG   92 (252)
T ss_pred             CEEEECCCCC
Confidence            9999999853

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.00099  Score=61.75  Aligned_cols=83  Identities=19%  Similarity=0.093  Sum_probs=60.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHc-CCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEM-GADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      +.++||+|+ |++|..+++.+...|++ |++++|+.++++.+.+. +........|..+.+++.+.+.++.. ..++|++
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHR-VVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCE-EEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            568999999 99999999999999997 89999998887666443 32222223344455666666665533 2469999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |++.|..
T Consensus        83 v~~ag~~   89 (277)
T PRK06180         83 VNNAGYG   89 (277)
T ss_pred             EECCCcc
Confidence            9999864

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=97.47  E-value=0.00011  Score=70.73  Aligned_cols=226  Identities=18%  Similarity=0.103  Sum_probs=143.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCC-CCCCCCEEEEcc-----------CcccccCC--
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK-HLKVDNQTRFVP-----------EFRNVCLS--   66 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~-~~~vGdrV~~~~-----------~~~~~~~~--   66 (408)
                      |.++|+|++|+..+. ++.. ....+|.++|||++|+|+++|++|+ .|++||||+...           ++......  
T Consensus        35 v~~~~~~~~d~~~~~-~~~~-~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~  112 (352)
T cd08247          35 VHAAALNPVDLKLYN-SYTF-HFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKD  112 (352)
T ss_pred             EEEEecChHhHHHhc-cccc-ccccCCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccc
Confidence            468999999998873 3211 1112477899999999999999998 899999998642           22333433  


Q ss_pred             --cceeccceeeecccccCCCCCCcceEEEEeee--eecCCeEEEEcc-Cccccccccccccc-cC--------------
Q psy1413          67 --PILRRRFSLRFREQKPIEDPDDHEVLLEMHCV--GICGSDVHYLTH-GQIGDFRLSDPMIV-GH--------------  126 (408)
Q Consensus        67 --~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~--~~~g~~vlv~g~-G~vG~~~i~~a~~~-G~--------------  126 (408)
                        .++..|+.+++.+.+.++....+++.+.....  --.+++++|+|+ +.+|++++++++.+ |.              
T Consensus       113 ~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~  192 (352)
T cd08247         113 KKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAEL  192 (352)
T ss_pred             cceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeChhHHHH
Confidence              56778888887555555554444442211111  124788989885 57888887777754 22              


Q ss_pred             --------------------------------cceeEEEccCch---HHHHhhcc---CCcEEEEEc-cCCCCcc-----
Q psy1413         127 --------------------------------EASGIVSKVGAK---VKHLKATR---PGGCLVIVG-AGSQDVK-----  162 (408)
Q Consensus       127 --------------------------------~~~~vv~~~g~~---~~~~~~l~---~gG~iv~~G-~~~~~~~-----  162 (408)
                                                      .++.+++++|..   ...+++++   ++|+++.++ ....+..     
T Consensus       193 ~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~  272 (352)
T cd08247         193 NKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFN  272 (352)
T ss_pred             HHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhh
Confidence                                            122233333331   14677888   999999874 3221111     


Q ss_pred             ------cCHH----HHHhcCcEEEEeecCC--CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         163 ------IPLV----LTMTKEIDIRGVFRYA--NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       163 ------~~~~----~~~~~~~~l~g~~~~~--~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                            +...    ...++..++.......  ..++++++++.++.++  +++++.++++++++||+.+.+++ ..+|++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~a~~~~~~~~-~~gkvv  349 (352)
T cd08247         273 SWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVK--PPIDSVYPFEDYKEAFERLKSNR-AKGKVV  349 (352)
T ss_pred             hccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeE--eeeccEecHHHHHHHHHHHHcCC-CCCcEE
Confidence                  1111    2224444544333222  3578899999999875  44789999999999999998764 344555


Q ss_pred             E
Q psy1413         231 I  231 (408)
Q Consensus       231 i  231 (408)
                      +
T Consensus       350 i  350 (352)
T cd08247         350 I  350 (352)
T ss_pred             E
Confidence            4

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.001  Score=60.79  Aligned_cols=84  Identities=19%  Similarity=0.233  Sum_probs=58.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ +++|..+++.+...|++ |++++|+.+ ..+    .++..+.....-..|..+.+++++.+.++.. ..
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGAD-VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999 99999999999999997 777887643 222    2333454333333445556777777766543 35


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|.+|++.|..
T Consensus        86 ~id~li~~ag~~   97 (254)
T PRK06114         86 ALTLAVNAAGIA   97 (254)
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.46  E-value=0.001  Score=60.76  Aligned_cols=84  Identities=18%  Similarity=0.222  Sum_probs=60.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh--HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK--LKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~--~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++++...  .+.+++.+....+..-|..+.+++++.+.++.. ..++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGAD-IVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4688999999 99999999999999998 7777775422  233455565444334455566777777776543 24799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +++++.|..
T Consensus        86 ~lv~~ag~~   94 (251)
T PRK12481         86 ILINNAGII   94 (251)
T ss_pred             EEEECCCcC
Confidence            999999853

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.0011  Score=60.19  Aligned_cols=83  Identities=22%  Similarity=0.219  Sum_probs=59.0

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----c--CCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----M--GADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~--ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      +.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+.+    .  +....+-.-|..+.+++.+.+.++.. ..
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRD-LALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467999999 99999999999999975 8888998877654422    1  33333333444556677776666543 35


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        81 ~id~vi~~ag~~   92 (248)
T PRK08251         81 GLDRVIVNAGIG   92 (248)
T ss_pred             CCCEEEECCCcC
Confidence            799999999853

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.46  E-value=0.00098  Score=60.06  Aligned_cols=83  Identities=25%  Similarity=0.227  Sum_probs=59.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .+++++|+|+ |++|..+++.+...|++ |++++|++++.+.+ ++...  ...+...|..+.+++++.+.++.. ..++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQ-VCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            3578999999 99999999999999996 89999988877655 33321  122223444556667766665543 2478


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |.++++.|.
T Consensus        83 d~ii~~ag~   91 (238)
T PRK05786         83 DGLVVTVGG   91 (238)
T ss_pred             CEEEEcCCC
Confidence            999999875

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.46  E-value=0.00037  Score=71.47  Aligned_cols=85  Identities=18%  Similarity=0.357  Sum_probs=61.7

Q ss_pred             CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC---------------------hhhHHHHHHcCCCeEEecCCC
Q psy1413         313 GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL---------------------EHKLKTAKEMGADATVLIDRN  371 (408)
Q Consensus       313 ~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~---------------------~~~~~~~~~~ga~~~i~~~~~  371 (408)
                      ..+++++|+|+|+|+.|+++++.++.+|++ |+++++.                     ..+++.++++|++..++....
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~~-V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGHA-VTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            357889999999999999999999999997 8878742                     345677888999887765321


Q ss_pred             CChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         372 HSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      .+. ... .+     ..++|.+|+++|......+
T Consensus       212 ~~~-~~~-~~-----~~~~D~Vi~AtG~~~~~~~  238 (564)
T PRK12771        212 EDI-TLE-QL-----EGEFDAVFVAIGAQLGKRL  238 (564)
T ss_pred             CcC-CHH-HH-----HhhCCEEEEeeCCCCCCcC
Confidence            111 111 11     1369999999998765443

>PRK06720 hypothetical protein; Provisional

Probab=97.46  E-value=0.0014  Score=55.86  Aligned_cols=84  Identities=23%  Similarity=0.237  Sum_probs=59.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.+++|+|+ +++|..++..+...|++ |++++++.++.+..    ++.+....+-..|..+.+++.+.+.++.. ..+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAK-VIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999 99999999999999987 88888876655332    23354433333444556777776665432 347


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+++++|..
T Consensus        94 iDilVnnAG~~  104 (169)
T PRK06720         94 IDMLFQNAGLY  104 (169)
T ss_pred             CCEEEECCCcC
Confidence            99999999853

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.00099  Score=60.76  Aligned_cols=84  Identities=19%  Similarity=0.236  Sum_probs=59.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC-CCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMG-ADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.+..+...+.. .......-|..+.+++.+.+.++.. ..++|.
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGAR-VALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4678999999 99999999999999997 888998876655444432 2222223344456677666665532 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        93 vi~~ag~~  100 (255)
T PRK06841         93 LVNSAGVA  100 (255)
T ss_pred             EEECCCCC
Confidence            99999853

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.45  E-value=0.00092  Score=61.22  Aligned_cols=83  Identities=28%  Similarity=0.273  Sum_probs=58.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH---HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA---KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~---~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|++...+..   ++.+.+..+...|..+.+++.+.+.++.. ..++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGAR-VVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999 99999999999999997 88888875433322   23354433333344456677777766543 2479


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |++|+++|.
T Consensus        86 d~lv~nAg~   94 (260)
T PRK12823         86 DVLINNVGG   94 (260)
T ss_pred             eEEEECCcc
Confidence            999999984

>PRK05717 oxidoreductase; Validated

Probab=97.45  E-value=0.0011  Score=60.54  Aligned_cols=84  Identities=24%  Similarity=0.248  Sum_probs=60.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcC-CCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQG-EQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~~d~  392 (408)
                      .+.+++|+|+ |++|..+++.+...|++ |++++++..+.+.+ ++++....+..-|..+.+++.+.+.++... ..+|+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQ-VVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            3578999999 99999999999999997 88888876665443 445543333344555566776666665432 36899


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|++.|..
T Consensus        88 li~~ag~~   95 (255)
T PRK05717         88 LVCNAAIA   95 (255)
T ss_pred             EEECCCcc
Confidence            99999864

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.0011  Score=60.55  Aligned_cols=84  Identities=23%  Similarity=0.255  Sum_probs=59.3

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      ..+.+++|+|+ |++|..+++.+...|++ |++++|+.++++.+.+    .+....+-.-|..+.+++++.+.++.. ..
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAK-VVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            34689999999 99999999999999996 9999998887654422    222222222334455677776666532 34


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|++|++.|.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            78999999985

>PRK09242 tropinone reductase; Provisional

Probab=97.44  E-value=0.0012  Score=60.25  Aligned_cols=83  Identities=24%  Similarity=0.175  Sum_probs=60.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-H---c--CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-E---M--GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~---~--ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+. +   .  +....+...|..+.+++++.+.++.. .
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGAD-VLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4679999999 99999999999999997 888899877765442 2   2  33333334455556677766665532 3


Q ss_pred             CCCceEEEcccc
Q psy1413         388 EQPDKTIDCSGI  399 (408)
Q Consensus       388 ~~~d~i~d~~g~  399 (408)
                      .++|+++++.|.
T Consensus        87 g~id~li~~ag~   98 (257)
T PRK09242         87 DGLHILVNNAGG   98 (257)
T ss_pred             CCCCEEEECCCC
Confidence            479999999986

>PRK08264 short chain dehydrogenase; Validated

Probab=97.43  E-value=0.00094  Score=60.24  Aligned_cols=78  Identities=21%  Similarity=0.200  Sum_probs=56.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .+.+++|+|+ |++|..+++.+...|+++|++++|+.++.+.   .+....+-..|..+.+++++.+...   ..+|++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~---~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA---SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc---CCCCEEE
Confidence            4578999999 9999999999999999559999998776553   3333322233444456666655543   3689999


Q ss_pred             Ecccc
Q psy1413         395 DCSGI  399 (408)
Q Consensus       395 d~~g~  399 (408)
                      ++.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            99987

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.43  E-value=0.0012  Score=60.27  Aligned_cols=84  Identities=23%  Similarity=0.248  Sum_probs=60.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|.....-.-|..+.+++++.+.++.. ..+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAE-VILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP   87 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4688999999 99999999999999997 88889987765443    22343333333344556777777766532 357


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+|++.|..
T Consensus        88 ~d~li~~ag~~   98 (255)
T PRK07523         88 IDILVNNAGMQ   98 (255)
T ss_pred             CCEEEECCCCC
Confidence            89999999854

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.43  E-value=0.0011  Score=59.77  Aligned_cols=82  Identities=29%  Similarity=0.323  Sum_probs=59.7

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      +.++||+|+ |++|..+++.+...|.+ |++++|+..+.+.+    ++.+....+...|..+.+++.+.+.++.. ..++
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999 99999999999999998 89999987765432    33455444444455555666666665432 2468


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |.+++++|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999999975

>PRK07791 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.0011  Score=61.79  Aligned_cols=85  Identities=26%  Similarity=0.256  Sum_probs=60.8

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh---------hhHHH----HHHcCCCeEEecCCCCChHHHHHH
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE---------HKLKT----AKEMGADATVLIDRNHSLEEISTH  380 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~---------~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~  380 (408)
                      -.+.++||+|+ +++|..+++.+...|++ |++++++.         ++++.    +++.|....+...|..+.+++++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~-vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            35689999999 99999999999999998 77776654         33332    233354444444556667788877


Q ss_pred             HHHHhc-CCCCceEEEcccch
Q psy1413         381 IIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       381 ~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +.++.. ..++|++|++.|..
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~  103 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGIL  103 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCC
Confidence            777654 25799999999864

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.00099  Score=60.32  Aligned_cols=79  Identities=23%  Similarity=0.135  Sum_probs=58.0

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ++++|+|+ |++|..+++.+...|++ |++++|+.++++.+.+.+....+-..|..+.+++++.+.++.  ...|.++.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~d~~i~~   78 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQ-VIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLP--FIPELWIFN   78 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCE-EEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcc--cCCCEEEEc
Confidence            57999999 99999999999999997 888999988877765544222222344455677777777653  246888877


Q ss_pred             ccc
Q psy1413         397 SGI  399 (408)
Q Consensus       397 ~g~  399 (408)
                      .|.
T Consensus        79 ag~   81 (240)
T PRK06101         79 AGD   81 (240)
T ss_pred             Ccc
Confidence            764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=97.43  E-value=0.0011  Score=60.09  Aligned_cols=84  Identities=15%  Similarity=0.105  Sum_probs=57.6

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH----HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL----KTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~----~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      ++++||+|+ |++|..+++.+...|++.++...++..+.    +.+++.+........|..+.+++.+.+.++.. .+++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI   82 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999 99999999999999998433344433332    22334565554444555566777777666543 2579


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|++.|..
T Consensus        83 d~li~~ag~~   92 (246)
T PRK12938         83 DVLVNNAGIT   92 (246)
T ss_pred             CEEEECCCCC
Confidence            9999999864

>PRK08643 acetoin reductase; Validated

Probab=97.43  E-value=0.0012  Score=60.17  Aligned_cols=83  Identities=18%  Similarity=0.236  Sum_probs=59.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    .+.+....+-..|..+.+++.+.+.++.. ..++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFK-VAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999 99999999999999996 88888887665433    22344333334455566777777766543 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |.+|++.|..
T Consensus        81 d~vi~~ag~~   90 (256)
T PRK08643         81 NVVVNNAGVA   90 (256)
T ss_pred             CEEEECCCCC
Confidence            9999999853

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.42  E-value=0.0012  Score=62.25  Aligned_cols=84  Identities=21%  Similarity=0.285  Sum_probs=60.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++.+++. .+.+    .+++.|....+...|..+.+++++.+..+....+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~-Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~   89 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGAT-VVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG   89 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence            4578999999 99999999999999997 77777643 2322    2334455555555666677777777766544457


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        90 iD~li~nAG~~  100 (306)
T PRK07792         90 LDIVVNNAGIT  100 (306)
T ss_pred             CCEEEECCCCC
Confidence            99999999864

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0014  Score=59.77  Aligned_cols=83  Identities=19%  Similarity=0.213  Sum_probs=58.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+....+-..+..+.+++++.+.+... -..
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAH-VIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999 99999999999999996 89999887665443    22343332223344556677666666543 246


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|+++++.|.
T Consensus        86 id~li~~ag~   95 (252)
T PRK07035         86 LDILVNNAAA   95 (252)
T ss_pred             CCEEEECCCc
Confidence            9999999985

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0013  Score=60.28  Aligned_cols=83  Identities=23%  Similarity=0.263  Sum_probs=59.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH---HcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK---EMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~---~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .+.+++|+|+ |++|..+++.+...|++ |++++|+....+..+   +.+....+-..|..+.+++.+.+.++.. ..++
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGAN-LILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999999 99999999999999998 888888865433332   2343333334455566777776666543 2478


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |.+|++.|.
T Consensus        84 d~vi~~ag~   92 (263)
T PRK08226         84 DILVNNAGV   92 (263)
T ss_pred             CEEEECCCc
Confidence            999999985

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0014  Score=60.16  Aligned_cols=82  Identities=24%  Similarity=0.261  Sum_probs=59.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      .++||+|+ |++|..+++.+...|++ |++++|+..+.+.+    +..+....+...|..+.+++.+.+.++.. ..++|
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQ-LVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            57999999 99999999999999986 89999987664432    33454444444555566777777766543 24689


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      .+|+++|..
T Consensus        81 ~vi~~ag~~   89 (263)
T PRK06181         81 ILVNNAGIT   89 (263)
T ss_pred             EEEECCCcc
Confidence            999999853

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0014  Score=59.50  Aligned_cols=83  Identities=20%  Similarity=0.152  Sum_probs=56.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+.....-..|..+.+++.+.+.++.. ..+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGAS-VVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4578999999 99999999999999987 88888887654333    22232222223344455666665555432 236


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|+++|.
T Consensus        84 id~vi~~ag~   93 (250)
T PRK07774         84 IDYLVNNAAI   93 (250)
T ss_pred             CCEEEECCCC
Confidence            9999999985

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.40  E-value=0.0014  Score=60.01  Aligned_cols=81  Identities=25%  Similarity=0.206  Sum_probs=57.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-----cCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-----MGADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-----~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      .+.++||+|+ +++|..+++.+...|++ |++++|+.++.+.+.+     .+....+..-|..+.+++.+.+...   ..
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~---g~   81 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCH-LHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA---GD   81 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh---CC
Confidence            3689999999 99999999999999995 9999998776654321     2333333333444556666665543   47


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+|++.|..
T Consensus        82 id~lv~~ag~~   92 (259)
T PRK06125         82 IDILVNNAGAI   92 (259)
T ss_pred             CCEEEECCCCC
Confidence            99999999863

>PRK06196 oxidoreductase; Provisional

Probab=97.40  E-value=0.001  Score=63.00  Aligned_cols=82  Identities=22%  Similarity=0.316  Sum_probs=59.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ .++..-..+ .-|..+.+++++.+.++.. ..++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~-Vv~~~R~~~~~~~~~~~l~~v~~~-~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAH-VIVPARRPDVAREALAGIDGVEVV-MLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhhhCeEE-EccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            3578999999 99999999999999997 88889988776544 333211222 2344556777777766543 357999


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      +|+++|.
T Consensus       103 li~nAg~  109 (315)
T PRK06196        103 LINNAGV  109 (315)
T ss_pred             EEECCCC
Confidence            9999985

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.40  E-value=0.0013  Score=59.82  Aligned_cols=81  Identities=20%  Similarity=0.228  Sum_probs=60.5

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEEE
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTID  395 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~d  395 (408)
                      +++|+|+ |++|..+++.+...|++ |++++|+.++++.+.+ ++....+..-|..+.+++++.+.++.. ..++|.+++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHK-VIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5899999 99999999999999997 8889999887766533 454444444455566777777666543 247999999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      ++|..
T Consensus        81 ~ag~~   85 (248)
T PRK10538         81 NAGLA   85 (248)
T ss_pred             CCCcc
Confidence            99853

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=97.40  E-value=0.00069  Score=65.98  Aligned_cols=83  Identities=24%  Similarity=0.298  Sum_probs=61.5

Q ss_pred             hhhhhhcc-Cc-CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHH
Q psy1413         305 GVHACRRA-GV-TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHII  382 (408)
Q Consensus       305 ~~~~~~~~-~~-~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~  382 (408)
                      .+.++.+. .+ -.+++++|+|.|.+|+.+++.++.+|++ |+++++++.+...+...|+. +.+         +.+.+ 
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~-ViV~d~dp~ra~~A~~~G~~-v~~---------l~eal-  265 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGAR-VIVTEVDPICALQAAMDGFR-VMT---------MEEAA-  265 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCchhhHHHHhcCCE-ecC---------HHHHH-
Confidence            44444333 33 3789999999999999999999999996 99999988887766666764 221         22222 


Q ss_pred             HHhcCCCCceEEEcccchhhhh
Q psy1413         383 ELLQGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       383 ~~~~~~~~d~i~d~~g~~~~~~  404 (408)
                           +++|++|+++|....++
T Consensus       266 -----~~aDVVI~aTG~~~vI~  282 (425)
T PRK05476        266 -----ELGDIFVTATGNKDVIT  282 (425)
T ss_pred             -----hCCCEEEECCCCHHHHH
Confidence                 26899999999887765

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.0015  Score=59.85  Aligned_cols=83  Identities=20%  Similarity=0.263  Sum_probs=59.2

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCC--CeEEecCCCCChHHHHHHHHHHhcC-CCCc
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGA--DATVLIDRNHSLEEISTHIIELLQG-EQPD  391 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga--~~~i~~~~~~~~~~~~~~~~~~~~~-~~~d  391 (408)
                      ..++||+|+ |++|..+++.+...|++ |++++|+.++++.+.+ +..  ...+-.-|..+.+++.+.+.++... ..+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGAT-LGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            357999999 99999999999999996 8889998887765433 321  2222234445567777776665432 3589


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      ++|+++|..
T Consensus        81 ~lv~~ag~~   89 (257)
T PRK07024         81 VVIANAGIS   89 (257)
T ss_pred             EEEECCCcC
Confidence            999999853

>PRK08589 short chain dehydrogenase; Validated

Probab=97.38  E-value=0.0014  Score=60.53  Aligned_cols=83  Identities=20%  Similarity=0.245  Sum_probs=58.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH-H---HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT-A---KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~-~---~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+ ++.+. +   ++.+........|..+.+++.+.+.++.. ..+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~-vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAY-VLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            4678999999 99999999999999997 8888888 44332 2   23343333333444556677776666643 246


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|++.|..
T Consensus        83 id~li~~Ag~~   93 (272)
T PRK08589         83 VDVLFNNAGVD   93 (272)
T ss_pred             cCEEEECCCCC
Confidence            89999999864

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0012  Score=60.27  Aligned_cols=82  Identities=28%  Similarity=0.281  Sum_probs=59.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      ++++++|+|+ |++|..+++.+...|++ |++++|+..+.+.. ++++.. .+ ..|..+.+++++.+.++.. ..++|.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~-~~-~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGAT-VVVGDIDPEAGKAAADEVGGL-FV-PTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCc-EE-EeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999 99999999999999997 88888887776544 444432 22 2233445666666666533 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        83 vi~~ag~~   90 (255)
T PRK06057         83 AFNNAGIS   90 (255)
T ss_pred             EEECCCcC
Confidence            99999853

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.37  E-value=0.0015  Score=62.09  Aligned_cols=83  Identities=20%  Similarity=0.265  Sum_probs=59.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC---CCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG---ADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++.   ....+...|..+.+++++.+.++.. ..+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWH-VIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            4678999999 99999999999999986 88889988776544 3332   2222223445556777777766532 346


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|+++|.
T Consensus        84 iD~li~nAg~   93 (322)
T PRK07453         84 LDALVCNAAV   93 (322)
T ss_pred             ccEEEECCcc
Confidence            9999999985

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.37  E-value=0.0016  Score=59.59  Aligned_cols=83  Identities=25%  Similarity=0.239  Sum_probs=60.4

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      +.++||+|+ |++|..+++.+...|++ |++++++.++.+.+ ++++....+-.-|..+.+++++.+.++.. ..++|++
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGAR-VVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            578999999 99999999999999997 88888988776554 33443333333444556777777666533 2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      +++.|..
T Consensus        85 i~~ag~~   91 (257)
T PRK07067         85 FNNAALF   91 (257)
T ss_pred             EECCCcC
Confidence            9998853

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.37  E-value=0.0014  Score=60.62  Aligned_cols=83  Identities=24%  Similarity=0.241  Sum_probs=59.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.+++|+|+ |++|+.+++.+...|++ |++++|+.++.+.+    ++.+.....-..|..+.+++.+.+.++.. ..+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAK-VAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999 99999999999999997 88889887665433    22344333333444455667666666543 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|+++|.
T Consensus        88 id~li~~ag~   97 (278)
T PRK08277         88 CDILINGAGG   97 (278)
T ss_pred             CCEEEECCCC
Confidence            9999999985

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0014  Score=60.73  Aligned_cols=82  Identities=22%  Similarity=0.257  Sum_probs=57.5

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ++++||+|+|++|..+++.+. .|++ |++++|+.++++.+    ++.|....+...|..+.+++.+.+.++....++|.
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~~-Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGKK-VLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            357888888999999999985 7876 88899987765433    22344333333455566777777766533357999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        80 li~nAG~~   87 (275)
T PRK06940         80 LVHTAGVS   87 (275)
T ss_pred             EEECCCcC
Confidence            99999864

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.37  E-value=0.0017  Score=59.35  Aligned_cols=84  Identities=21%  Similarity=0.269  Sum_probs=60.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|++++.+.+    ++.+....+..-|..+.+.+.+.+.++.. ..+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAA-VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999 99999999999999997 88888887665433    33455444444455556666666665432 246


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        85 ~d~vi~~ag~~   95 (262)
T PRK13394         85 VDILVSNAGIQ   95 (262)
T ss_pred             CCEEEECCccC
Confidence            89999999863

>PRK06484 short chain dehydrogenase; Validated

Probab=97.36  E-value=0.0012  Score=67.18  Aligned_cols=85  Identities=18%  Similarity=0.162  Sum_probs=64.3

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      ..++++||+|+ +++|+.+++.+...|++ |++++|+.++++.+. +++.......-|..+.+++++.+.++.. .+.+|
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDR-LLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999 99999999999999996 888999888876654 3554433333445566777777776543 24799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      ++|+++|..
T Consensus       346 ~li~nAg~~  354 (520)
T PRK06484        346 VLVNNAGIA  354 (520)
T ss_pred             EEEECCCCc
Confidence            999999864

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.36  E-value=0.0019  Score=58.36  Aligned_cols=83  Identities=27%  Similarity=0.332  Sum_probs=60.2

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      +.+++|+|+ |++|..+++.+...|++ |++++|++++.+.+    +..+....+...|..+.+++++.++++.. ..++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVN-VGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            478999999 99999999999999995 99999987765433    33343333334455566777777766543 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |.+|++.|..
T Consensus        86 d~vi~~ag~~   95 (239)
T PRK07666         86 DILINNAGIS   95 (239)
T ss_pred             cEEEEcCccc
Confidence            9999999864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.35  E-value=0.0019  Score=58.93  Aligned_cols=84  Identities=19%  Similarity=0.238  Sum_probs=60.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.+++|+|+ |++|..+++.+...|++ |++++|+.++++.+    ++.+.....-.-|..+.+++.+.+.++.. ..+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAH-VLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999 99999999999999996 89999987665433    33453333333444556777777666543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+|++.|..
T Consensus        89 id~vi~~ag~~   99 (256)
T PRK06124         89 LDILVNNVGAR   99 (256)
T ss_pred             CCEEEECCCCC
Confidence            89999999853

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.35  E-value=0.0018  Score=59.05  Aligned_cols=83  Identities=25%  Similarity=0.337  Sum_probs=59.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    +..+....+-.-|..+.+++++.+.++.. ..+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~-vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAE-IIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999999 99999999999999996 88888887765443    22343333333444556777776666532 347


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|.++++.|.
T Consensus        87 id~vi~~ag~   96 (254)
T PRK08085         87 IDVLINNAGI   96 (254)
T ss_pred             CCEEEECCCc
Confidence            9999999985

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.34  E-value=0.0019  Score=58.44  Aligned_cols=84  Identities=26%  Similarity=0.268  Sum_probs=60.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .+.++||+|+ |++|+.+++.+...|++ |++.+++.++++.+ ...+....+...|..+.+++.+.+.++.. ..++|.
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAI-VGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3578999999 99999999999999986 77777877776654 33454333334444556677766665533 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        84 vi~~ag~~   91 (245)
T PRK12936         84 LVNNAGIT   91 (245)
T ss_pred             EEECCCCC
Confidence            99999853

>KOG1205|consensus

Probab=97.33  E-value=0.0017  Score=59.54  Aligned_cols=85  Identities=24%  Similarity=0.262  Sum_probs=64.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCC--eEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGAD--ATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~--~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .+++++|+|+ .|+|..++.-+..+|++ ++++.++.++++.    +++.++.  ..+-.-|..+.+++++.+..+.. -
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~-l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAK-LVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCc-eEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            4678999999 99999999999999998 7777777766554    4555533  34445666677888888766542 4


Q ss_pred             CCCceEEEcccchh
Q psy1413         388 EQPDKTIDCSGIES  401 (408)
Q Consensus       388 ~~~d~i~d~~g~~~  401 (408)
                      +++|+.+|..|...
T Consensus        90 g~vDvLVNNAG~~~  103 (282)
T KOG1205|consen   90 GRVDVLVNNAGISL  103 (282)
T ss_pred             CCCCEEEecCcccc
Confidence            68999999998653

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.33  E-value=0.0018  Score=59.89  Aligned_cols=82  Identities=20%  Similarity=0.093  Sum_probs=59.9

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI  394 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~  394 (408)
                      .++||+|+ |++|..+++.+...|.+ |++++|+.++.+.+++ .+....+-..|..+.+++.+.+.++.. ..++|++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDR-VAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57999999 99999999999999997 8888898887766544 333333333444556777777766432 35789999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      +++|..
T Consensus        82 ~~ag~~   87 (276)
T PRK06482         82 SNAGYG   87 (276)
T ss_pred             ECCCCC
Confidence            999854

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.32  E-value=0.0019  Score=59.34  Aligned_cols=84  Identities=23%  Similarity=0.297  Sum_probs=61.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.+++|+|+ +++|..+++.+...|++ |++++++.++.+.+    +..|....+-.-|..+.+++++.+.++.. -.+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4578999999 99999999999999998 88888887765433    33455444334455566777776666543 246


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+|++.|..
T Consensus        88 id~li~~ag~~   98 (265)
T PRK07097         88 IDILVNNAGII   98 (265)
T ss_pred             CCEEEECCCCC
Confidence            99999999863

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0014  Score=60.45  Aligned_cols=81  Identities=21%  Similarity=0.303  Sum_probs=56.5

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEE-ecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATV-LIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i-~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      +++|+|+ |++|..+++.+...|++ |++++|++++++.+    +..+...+. ...|..+.+++.+.+.++.. ..++|
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAE-LFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999 99999999999999997 88888887765433    333443221 22334455666666665532 34799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      ++|+++|..
T Consensus        81 ~lv~~ag~~   89 (272)
T PRK07832         81 VVMNIAGIS   89 (272)
T ss_pred             EEEECCCCC
Confidence            999999853

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.32  E-value=0.0016  Score=61.85  Aligned_cols=82  Identities=23%  Similarity=0.272  Sum_probs=56.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-H----cC-CCe---EEecCCCCChHHHHHHHHHHh
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-E----MG-ADA---TVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~----~g-a~~---~i~~~~~~~~~~~~~~~~~~~  385 (408)
                      .+++++|+|+ +++|..+++.+...|++ |++++|+.++++.+. +    ++ ...   ..|..+  +..+..+.+.+..
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLN-LVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            4789999999 99999999999999997 999999988876542 2    22 111   223321  2234444455554


Q ss_pred             cCCCCceEEEcccch
Q psy1413         386 QGEQPDKTIDCSGIE  400 (408)
Q Consensus       386 ~~~~~d~i~d~~g~~  400 (408)
                      ++..+|++++++|..
T Consensus       129 ~~~didilVnnAG~~  143 (320)
T PLN02780        129 EGLDVGVLINNVGVS  143 (320)
T ss_pred             cCCCccEEEEecCcC
Confidence            444577999999864

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0024  Score=57.68  Aligned_cols=84  Identities=27%  Similarity=0.309  Sum_probs=59.9

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      ....+++|+|+ |++|+.+++.+...|.+ |++++|+.++.+.+    ++.+....+-..|..+.+++.+.+.++.. ..
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWD-LALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            34578999999 99999999999999996 99899987765543    22333333333444556777666666533 24


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|.+|++.|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            69999999985

>PRK08303 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0017  Score=61.13  Aligned_cols=83  Identities=17%  Similarity=0.169  Sum_probs=59.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh----------hhHH----HHHHcCCCeEEecCCCCChHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE----------HKLK----TAKEMGADATVLIDRNHSLEEISTH  380 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~----------~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~  380 (408)
                      .+.++||+|+ +++|+.+++.+...|++ |++++|+.          ++++    .+++.|........|..+.+++++.
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGAT-VYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            3678999999 99999999999999997 88888863          2332    2333454444444556667788877


Q ss_pred             HHHHhcC-CCCceEEEcc-cc
Q psy1413         381 IIELLQG-EQPDKTIDCS-GI  399 (408)
Q Consensus       381 ~~~~~~~-~~~d~i~d~~-g~  399 (408)
                      +.++... .++|++|+++ |.
T Consensus        86 ~~~~~~~~g~iDilVnnA~g~  106 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWGG  106 (305)
T ss_pred             HHHHHHHcCCccEEEECCccc
Confidence            7776542 4799999998 64

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.002  Score=59.51  Aligned_cols=82  Identities=20%  Similarity=0.214  Sum_probs=57.7

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc-----CCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM-----GADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++.+.. +++     +....+...|..+.+++.+.+.++.. ..
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGAA-VMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            578999999 99999999999999996 88898887665433 221     12222223344455677666666543 34


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|++|++.|.
T Consensus        86 ~~d~li~~ag~   96 (276)
T PRK05875         86 RLHGVVHCAGG   96 (276)
T ss_pred             CCCEEEECCCc
Confidence            78999999985

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.0019  Score=60.86  Aligned_cols=84  Identities=29%  Similarity=0.240  Sum_probs=59.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc-----CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM-----GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++     +....+..-|..+.+++++.+.++.. .
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~-vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAH-VVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            4578999999 99999999999999996 88888887765432 211     22222333455566777777776643 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus        94 ~~iD~li~nAg~~  106 (306)
T PRK06197         94 PRIDLLINNAGVM  106 (306)
T ss_pred             CCCCEEEECCccc
Confidence            4699999999853

>PRK08017 oxidoreductase; Provisional

Probab=97.31  E-value=0.0016  Score=59.32  Aligned_cols=79  Identities=19%  Similarity=0.225  Sum_probs=57.6

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc--CCCCceEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ--GEQPDKTI  394 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~~~d~i~  394 (408)
                      +++||+|+ |++|+.+++.+...|++ |++++|+.++.+.+++.++..+.  .|..+.+++.+.+..+..  +..+|.++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~--~D~~~~~~~~~~~~~i~~~~~~~~~~ii   79 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYR-VLAACRKPDDVARMNSLGFTGIL--LDLDDPESVERAADEVIALTDNRLYGLF   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHhHHHHhCCCeEEE--eecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            57999999 99999999999999996 88889999888877777754432  222334555444444321  34789999


Q ss_pred             Ecccc
Q psy1413         395 DCSGI  399 (408)
Q Consensus       395 d~~g~  399 (408)
                      ++.|.
T Consensus        80 ~~ag~   84 (256)
T PRK08017         80 NNAGF   84 (256)
T ss_pred             ECCCC
Confidence            98874

>PRK12743 oxidoreductase; Provisional

Probab=97.31  E-value=0.0021  Score=58.74  Aligned_cols=83  Identities=20%  Similarity=0.153  Sum_probs=57.2

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe-cChhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITD-ILEHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~-~~~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      ++++||+|+ |++|+.+++.+...|++ |+++. ++.++.+    .++..|....+..-|..+.+++++.+.++.. ..+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999 99999999999999998 66554 4444433    3344565444444455556777666666543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+|+++|..
T Consensus        81 id~li~~ag~~   91 (256)
T PRK12743         81 IDVLVNNAGAM   91 (256)
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.30  E-value=0.0021  Score=58.43  Aligned_cols=84  Identities=17%  Similarity=0.150  Sum_probs=58.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      ++.++||+|+ |++|+.+++.+...|++.+++..|+..+.+.    +++.+....+-..|..+.+++.+.+.++.. ..+
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999 9999999999999999844445677665433    233454444334555566777777766643 246


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|++.|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            8999999885

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.29  E-value=0.0024  Score=58.19  Aligned_cols=83  Identities=29%  Similarity=0.308  Sum_probs=59.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+....+-..|..+.+++.+.+.++.. ..+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAK-VVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999 99999999999999997 88889987766543    22344433333455556777776666543 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|+++|.
T Consensus        82 ~d~vi~~a~~   91 (258)
T PRK12429         82 VDILVNNAGI   91 (258)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK06484 short chain dehydrogenase; Validated

Probab=97.29  E-value=0.0016  Score=66.25  Aligned_cols=83  Identities=23%  Similarity=0.279  Sum_probs=63.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++++.+ ++++........|..+.+++++.+.++.. ..++|+
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQ-VVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            5678999999 99999999999999997 88899988877654 55665443334455566777777777643 247999


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      +|++.|.
T Consensus        83 li~nag~   89 (520)
T PRK06484         83 LVNNAGV   89 (520)
T ss_pred             EEECCCc
Confidence            9999886

>PRK09186 flagellin modification protein A; Provisional

Probab=97.29  E-value=0.002  Score=58.73  Aligned_cols=83  Identities=20%  Similarity=0.287  Sum_probs=58.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc----CCCe-EEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM----GADA-TVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~----ga~~-~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++    +... .+...|..+.+++.+.+.++.. .
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGI-VIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            4688999999 99999999999999997 88888887776543 222    3222 2223344556777777766533 2


Q ss_pred             CCCceEEEcccc
Q psy1413         388 EQPDKTIDCSGI  399 (408)
Q Consensus       388 ~~~d~i~d~~g~  399 (408)
                      .++|++|++.|.
T Consensus        82 ~~id~vi~~A~~   93 (256)
T PRK09186         82 GKIDGAVNCAYP   93 (256)
T ss_pred             CCccEEEECCcc
Confidence            469999999863

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.29  E-value=0.0018  Score=59.87  Aligned_cols=83  Identities=20%  Similarity=0.170  Sum_probs=59.4

Q ss_pred             CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChhhH---HHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEHKL---KTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~~~---~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +  ++|..+++.+...|++ |++++|++...   +.+ ++.|.... ...|..+.+++++.+.++.. .
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~-V~~~~r~~~~~~~~~~~~~~~g~~~~-~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAE-LAFTYQGEALGKRVKPLAESLGSDFV-LPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCE-EEEecCchHHHHHHHHHHHhcCCceE-EeCCCCCHHHHHHHHHHHHHHh
Confidence            4678999998 5  9999999999999998 77787765322   222 33454332 33455667778877777654 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      ..+|++++++|..
T Consensus        84 g~iD~lVnnAG~~   96 (271)
T PRK06505         84 GKLDFVVHAIGFS   96 (271)
T ss_pred             CCCCEEEECCccC
Confidence            5799999999864

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0019  Score=59.79  Aligned_cols=84  Identities=21%  Similarity=0.295  Sum_probs=58.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-------HH----HHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-------LK----TAKEMGADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-------~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++       ++    .+++.+.....-..|..+.+++++.+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGAN-IVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4578999999 99999999999999997 8888886532       11    2233454443333445556777776665


Q ss_pred             Hhc-CCCCceEEEcccch
Q psy1413         384 LLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       384 ~~~-~~~~d~i~d~~g~~  400 (408)
                      +.. ...+|.+|+++|..
T Consensus        84 ~~~~~g~id~li~~ag~~  101 (273)
T PRK08278         84 AVERFGGIDICVNNASAI  101 (273)
T ss_pred             HHHHhCCCCEEEECCCCc
Confidence            432 24799999999853

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.28  E-value=0.0022  Score=58.15  Aligned_cols=84  Identities=21%  Similarity=0.221  Sum_probs=59.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.    +++.+....+-..|..+.+++.+.+.++.. ...
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAE-VIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999 99999999999999986 8889998665433    233344333333444556777776665532 246


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+|++.|..
T Consensus        84 ~d~vi~~ag~~   94 (251)
T PRK12826         84 LDILVANAGIF   94 (251)
T ss_pred             CCEEEECCCCC
Confidence            89999998754

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0017  Score=57.95  Aligned_cols=79  Identities=27%  Similarity=0.257  Sum_probs=58.3

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ++++|+|+ |++|..+++.+...|++ |++++++.++.+.++..+.. . ...|..+.+++++.+.++. +.++|++|.+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~-v~~~~r~~~~~~~~~~~~~~-~-~~~D~~~~~~v~~~~~~~~-~~~~d~vi~~   77 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWR-VIATARDAAALAALQALGAE-A-LALDVADPASVAGLAWKLD-GEALDAAVYV   77 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCE-EEEEECCHHHHHHHHhccce-E-EEecCCCHHHHHHHHHHhc-CCCCCEEEEC
Confidence            46899999 99999999999889997 88889988877777666543 2 2233344566666555543 3579999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      .|..
T Consensus        78 ag~~   81 (222)
T PRK06953         78 AGVY   81 (222)
T ss_pred             CCcc
Confidence            8864

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.27  E-value=0.0025  Score=58.29  Aligned_cols=83  Identities=18%  Similarity=0.173  Sum_probs=58.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++++ ++.+.    +.+.+....+-..|..+.+++.+.+.++.. ..+
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGAD-IIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999 99999999999999998 7777776 33222    233454433334455566777777766643 246


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+|++.|..
T Consensus        92 id~li~~ag~~  102 (258)
T PRK06935         92 IDILVNNAGTI  102 (258)
T ss_pred             CCEEEECCCCC
Confidence            89999999853

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0019  Score=58.90  Aligned_cols=80  Identities=20%  Similarity=0.212  Sum_probs=56.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++    +..+....+-.-|..+.+++++.+..+.. ..++|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~-v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGAT-VVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4688999999 99999999999999997 8888887654    12232222223344456677776666533 2478999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |++.|..
T Consensus        80 i~~ag~~   86 (252)
T PRK07856         80 VNNAGGS   86 (252)
T ss_pred             EECCCCC
Confidence            9999853

>PLN02253 xanthoxin dehydrogenase

Probab=97.27  E-value=0.0022  Score=59.48  Aligned_cols=84  Identities=19%  Similarity=0.244  Sum_probs=58.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC--CCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG--ADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++++.++.+.+ ++++  ....+..-|..+.+++++.+.++.. ..++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAK-VCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            3578999999 99999999999999997 88888876655433 3332  2222223344556677666665543 2469


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|+++|..
T Consensus        96 d~li~~Ag~~  105 (280)
T PLN02253         96 DIMVNNAGLT  105 (280)
T ss_pred             CEEEECCCcC
Confidence            9999999853

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0025  Score=57.81  Aligned_cols=84  Identities=18%  Similarity=0.119  Sum_probs=57.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|.+ |++++|+.. +.+.    ++..+.......-|..+.+++.+.+.++.. ..
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAH-VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            3578999999 99999999999999987 877877643 3322    233344333333445556777776666543 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        84 ~~d~vi~~ag~~   95 (248)
T PRK07806         84 GLDALVLNASGG   95 (248)
T ss_pred             CCcEEEECCCCC
Confidence            689999988753

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0019  Score=57.99  Aligned_cols=82  Identities=20%  Similarity=0.090  Sum_probs=56.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      +++++||+|+ |++|..+++.+...|++ |++++|+..+...    +++.+...+  ..|..+.+++++.+.++.. ..+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~--~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGAR-VALIGRGAAPLSQTLPGVPADALRIG--GIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCe-EEEEeCChHhHHHHHHHHhhcCceEE--EeecCCHHHHHHHHHHHHHHhCC
Confidence            3679999999 99999999999999998 8999897665432    222333222  2333445666666665533 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|++.|..
T Consensus        83 ~d~vi~~ag~~   93 (239)
T PRK12828         83 LDALVNIAGAF   93 (239)
T ss_pred             cCEEEECCccc
Confidence            99999998853

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.26  E-value=0.0027  Score=57.94  Aligned_cols=83  Identities=28%  Similarity=0.245  Sum_probs=59.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ +++|..+++.+...|++ +++++++.++.+.+    +..+.+..+-..|..+.+++++.+..+.. ..+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~-vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   88 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK   88 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999 99999999999999997 77788877665443    33344333333445556667766665433 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|.++++.|.
T Consensus        89 ~d~li~~ag~   98 (255)
T PRK06113         89 VDILVNNAGG   98 (255)
T ss_pred             CCEEEECCCC
Confidence            8999999985

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.25  E-value=0.0025  Score=58.16  Aligned_cols=83  Identities=17%  Similarity=0.249  Sum_probs=57.5

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh--HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK--LKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~--~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      +.++||+|+ |++|..+++.+...|++ |+.++++..+  .+.+++.+.....-.-|..+.+++.+.+.++.. ..++|+
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGCD-IVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCE-EEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            578999999 99999999999999998 7777654322  233444453333223444556777777766543 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        89 li~~Ag~~   96 (253)
T PRK08993         89 LVNNAGLI   96 (253)
T ss_pred             EEECCCCC
Confidence            99999863

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.25  E-value=0.0023  Score=58.52  Aligned_cols=83  Identities=17%  Similarity=0.117  Sum_probs=57.6

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-H----cC-CCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-E----MG-ADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~----~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+..+.+.+. +    .+ ....+-..|..+.+++.+.+.++.. ..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYR-VAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999 99999999999999997 888888876654332 1    23 1222223344556667666666533 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|.+|++.|..
T Consensus        81 ~id~vv~~ag~~   92 (259)
T PRK12384         81 RVDLLVYNAGIA   92 (259)
T ss_pred             CCCEEEECCCcC
Confidence            799999999854

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.24  E-value=0.0024  Score=58.23  Aligned_cols=82  Identities=18%  Similarity=0.242  Sum_probs=56.3

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhcC-CCC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQG-EQP  390 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~~  390 (408)
                      .++||+|+ |++|..+++.+...|++ |++++|+.. +.+    .++..+....+..-|..+.+++.+.+.++... .++
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFD-LAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999 99999999999999997 777877543 222    22333433333334445567777766666432 469


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|++.|..
T Consensus        82 d~vi~~ag~~   91 (256)
T PRK12745         82 DCLVNNAGVG   91 (256)
T ss_pred             CEEEECCccC
Confidence            9999999853

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.0025  Score=58.89  Aligned_cols=83  Identities=19%  Similarity=0.097  Sum_probs=59.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      +.++||+|+ |++|..+++.+...|++ |++++|+.++++.+.+ ++....+...|..+.+++.+.+..+.. ..++|.+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDR-VVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999 99999999999989987 8889998877765543 332222223444555666666665432 2478999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus        82 i~~ag~~   88 (275)
T PRK08263         82 VNNAGYG   88 (275)
T ss_pred             EECCCCc
Confidence            9999864

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.24  E-value=0.0022  Score=58.51  Aligned_cols=84  Identities=15%  Similarity=0.162  Sum_probs=59.5

Q ss_pred             CCCEEEEEecc---hhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC-CCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGAG---PIGLVTLLTARALGASRVVITDILEHKLKTAKEMG-ADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~G---~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .++++||+|++   ++|..+++.+...|++ |++++|+++..+.++++. .......-|..+.+++++.+.++.. ...+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGAT-VIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999983   9999999999999998 888888754344444432 2222334455667777777777643 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++++++|..
T Consensus        85 D~lv~nAg~~   94 (252)
T PRK06079         85 DGIVHAIAYA   94 (252)
T ss_pred             CEEEEccccc
Confidence            9999999854

>TIGR02415 23BDH acetoin reductases

Probab=97.24  E-value=0.0027  Score=57.81  Aligned_cols=82  Identities=18%  Similarity=0.183  Sum_probs=58.1

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      .+++|+|+ |++|..+++.+...|++ |++++++.++.+.+    ++.+....+-..|..+.+++.+.+.++.. ..++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFA-VAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            37899999 99999999999999997 88888886655432    33454333333444556777776666543 24689


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      ++|++.|..
T Consensus        80 ~vi~~ag~~   88 (254)
T TIGR02415        80 VMVNNAGVA   88 (254)
T ss_pred             EEEECCCcC
Confidence            999999863

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.0023  Score=58.32  Aligned_cols=84  Identities=20%  Similarity=0.252  Sum_probs=57.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH---cCCCeEEecCCCCChHHHHHHHHHHhc-----
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE---MGADATVLIDRNHSLEEISTHIIELLQ-----  386 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~---~ga~~~i~~~~~~~~~~~~~~~~~~~~-----  386 (408)
                      +.+++|+|+ |++|..+++.+...|++.++...|+.++.+.+ ..   .+....+...|..+.+++.+.++++..     
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~   85 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR   85 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence            478999999 99999999999999998434346776555433 22   233333334455566777777766542     


Q ss_pred             --CCCCceEEEcccch
Q psy1413         387 --GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 --~~~~d~i~d~~g~~  400 (408)
                        ..++|++|++.|..
T Consensus        86 ~~~~~id~vi~~ag~~  101 (254)
T PRK12746         86 VGTSEIDILVNNAGIG  101 (254)
T ss_pred             cCCCCccEEEECCCCC
Confidence              24699999999853

>KOG1199|consensus

Probab=97.23  E-value=0.0016  Score=54.05  Aligned_cols=90  Identities=24%  Similarity=0.320  Sum_probs=72.6

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      ..+-.-||+|+ .++|...+.-+...|+. +++.+-- .+..+.++++|-..++...+.++.+|..+.+....+ -..+|
T Consensus         7 ~kglvalvtggasglg~ataerlakqgas-v~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGAS-VALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCce-EEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            34556788888 99999999999999998 7777754 444677899999999999998888999888877654 35789


Q ss_pred             eEEEcccchhhhhh
Q psy1413         392 KTIDCSGIESTIKL  405 (408)
Q Consensus       392 ~i~d~~g~~~~~~~  405 (408)
                      ..+||.|....++.
T Consensus        86 ~~vncagia~a~kt   99 (260)
T KOG1199|consen   86 ALVNCAGIAYAFKT   99 (260)
T ss_pred             eeeeccceeeeeee
Confidence            99999998766543

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0026  Score=57.24  Aligned_cols=84  Identities=23%  Similarity=0.228  Sum_probs=58.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .+.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++..  ...+-..|..+.+++.+.+.++.. ..++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYK-VAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999 99999999999989997 88899988776544 33321  111112233455667666666533 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |.+|++.|..
T Consensus        84 d~vi~~ag~~   93 (237)
T PRK07326         84 DVLIANAGVG   93 (237)
T ss_pred             CEEEECCCCC
Confidence            9999998753

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.22  E-value=0.0019  Score=60.44  Aligned_cols=70  Identities=27%  Similarity=0.368  Sum_probs=54.4

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      .+++++|+|.|.+|+.+++.++.+|++ |.+++|+.++.+.++++|+..+ ..      +++.+.+      +.+|+||+
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga~-V~v~~r~~~~~~~~~~~G~~~~-~~------~~l~~~l------~~aDiVI~  216 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGAN-VTVGARKSAHLARITEMGLSPF-HL------SELAEEV------GKIDIIFN  216 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHcCCeee-cH------HHHHHHh------CCCCEEEE
Confidence            578999999999999999999999995 9999999888888888886533 11      2232222      36899999


Q ss_pred             cccc
Q psy1413         396 CSGI  399 (408)
Q Consensus       396 ~~g~  399 (408)
                      +++.
T Consensus       217 t~p~  220 (296)
T PRK08306        217 TIPA  220 (296)
T ss_pred             CCCh
Confidence            8764

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.0027  Score=58.87  Aligned_cols=82  Identities=20%  Similarity=0.173  Sum_probs=57.4

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcC--CCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMG--ADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~g--a~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      +.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.    +.+  ....+-..|..+.+++++ +.++.. ..
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYL-VIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            467999999 99999999999999997 888888877654432    222  122222344455677766 665532 34


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|.++++.|..
T Consensus        81 ~id~vv~~ag~~   92 (280)
T PRK06914         81 RIDLLVNNAGYA   92 (280)
T ss_pred             CeeEEEECCccc
Confidence            789999998854

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.21  E-value=0.0028  Score=58.04  Aligned_cols=80  Identities=24%  Similarity=0.211  Sum_probs=57.6

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      ++||+|+ +++|..+++.+...|++ |++++|++++.+.+    ++.+.... -.-|..+.+++++.+.++.. ..++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGAR-VVISSRNEENLEKALKELKEYGEVYA-VKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCceE-EEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5899999 99999999999999997 88899987765443    22332222 23344556777777776643 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|++.|..
T Consensus        80 li~naG~~   87 (259)
T PRK08340         80 LVWNAGNV   87 (259)
T ss_pred             EEECCCCC
Confidence            99999853

>PRK07074 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0034  Score=57.28  Aligned_cols=83  Identities=20%  Similarity=0.200  Sum_probs=58.1

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC-CCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG-ADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      +.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++. ....+...|..+.+++.+.+.++.. ..++|.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDR-VLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999 99999999999999987 88889988776554 3332 1122223344455666666665532 246999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|++.|..
T Consensus        81 vi~~ag~~   88 (257)
T PRK07074         81 LVANAGAA   88 (257)
T ss_pred             EEECCCCC
Confidence            99999854

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0023  Score=57.90  Aligned_cols=79  Identities=24%  Similarity=0.299  Sum_probs=55.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .+.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+.+ .+.. ++. .|..+.+++.+.+..   ..++|++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~-~~~-~D~~~~~~v~~~~~~---~~~~d~v   81 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGAR-VVAAARNAAALDRLAGETGCE-PLR-LDVGDDAAIRAALAA---AGAFDGL   81 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCe-EEE-ecCCCHHHHHHHHHH---hCCCCEE
Confidence            4578999999 99999999999999986 8889998877765533 4433 222 222334445554443   2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |++.|..
T Consensus        82 i~~ag~~   88 (245)
T PRK07060         82 VNCAGIA   88 (245)
T ss_pred             EECCCCC
Confidence            9999864

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0032  Score=58.03  Aligned_cols=81  Identities=19%  Similarity=0.215  Sum_probs=59.1

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      ++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    +..+.+..+...|..+.+++.+.+.++.. ..++|+
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWR-LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999 99999999999999997 88888887765543    33354444444455566677776665533 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        81 lI~~ag~~   88 (270)
T PRK05650         81 IVNNAGVA   88 (270)
T ss_pred             EEECCCCC
Confidence            99999854

>PRK06128 oxidoreductase; Provisional

Probab=97.19  E-value=0.0029  Score=59.37  Aligned_cols=83  Identities=22%  Similarity=0.227  Sum_probs=58.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh--h----HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH--K----LKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~--~----~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .+.++||+|+ |++|..+++.+...|++ |+++.++.+  +    .+.+++.|....+...|..+.+++++.+.++.. .
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            3578999999 99999999999999997 666655432  1    123344565444444555666777777766543 2


Q ss_pred             CCCceEEEcccc
Q psy1413         388 EQPDKTIDCSGI  399 (408)
Q Consensus       388 ~~~d~i~d~~g~  399 (408)
                      .++|++|+++|.
T Consensus       133 g~iD~lV~nAg~  144 (300)
T PRK06128        133 GGLDILVNIAGK  144 (300)
T ss_pred             CCCCEEEECCcc
Confidence            479999999985

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.18  E-value=0.0029  Score=57.78  Aligned_cols=82  Identities=21%  Similarity=0.157  Sum_probs=56.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .+.+++|+|+ |++|..+++.+...|++ |+++.+ ++++.+.+++.+..  +-.-|..+.+++++.+.++.. ..++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~--~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAENEAKELREKGVF--TIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhCCCe--EEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3578999999 99999999999999998 655544 44444555444432  222344456777777766543 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        83 li~~ag~~   90 (255)
T PRK06463         83 LVNNAGIM   90 (255)
T ss_pred             EEECCCcC
Confidence            99999863

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.18  E-value=0.0017  Score=62.99  Aligned_cols=75  Identities=23%  Similarity=0.297  Sum_probs=58.7

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      ...+++++|+|.|.+|+.+++.++.+|++ |+++++++.+...+...|+. +.+         +.+.+      ++.|++
T Consensus       192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~---------leeal------~~aDVV  254 (406)
T TIGR00936       192 LIAGKTVVVAGYGWCGKGIAMRARGMGAR-VIVTEVDPIRALEAAMDGFR-VMT---------MEEAA------KIGDIF  254 (406)
T ss_pred             CCCcCEEEEECCCHHHHHHHHHHhhCcCE-EEEEeCChhhHHHHHhcCCE-eCC---------HHHHH------hcCCEE
Confidence            46789999999999999999999999997 88898888887777777763 221         11222      357999


Q ss_pred             EEcccchhhhhh
Q psy1413         394 IDCSGIESTIKL  405 (408)
Q Consensus       394 ~d~~g~~~~~~~  405 (408)
                      |+++|....++.
T Consensus       255 ItaTG~~~vI~~  266 (406)
T TIGR00936       255 ITATGNKDVIRG  266 (406)
T ss_pred             EECCCCHHHHHH
Confidence            999998887764

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK05855 short chain dehydrogenase; Validated

Probab=97.17  E-value=0.0026  Score=65.34  Aligned_cols=84  Identities=27%  Similarity=0.285  Sum_probs=63.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++++.+    ++.|....+-..|..+.+++++.+.++.. .++
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAE-VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4578999999 99999999999999998 88899988776543    33454444444566667777777777643 346


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       393 id~lv~~Ag~~  403 (582)
T PRK05855        393 PDIVVNNAGIG  403 (582)
T ss_pred             CcEEEECCccC
Confidence            99999999864

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0037  Score=56.55  Aligned_cols=84  Identities=14%  Similarity=0.092  Sum_probs=56.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.+++|+|+ |++|..+++.+...|++ ++++.++ ..+.+    .++..+....+...|..+.+++.+.+.++.. .+
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999 99999999999999998 5555554 33222    2333454333334455556777776666532 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        83 ~id~vi~~ag~~   94 (245)
T PRK12937         83 RIDVLVNNAGVM   94 (245)
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.16  E-value=0.0035  Score=56.97  Aligned_cols=82  Identities=20%  Similarity=0.238  Sum_probs=54.9

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc--CCCCc
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ--GEQPD  391 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~~~d  391 (408)
                      +.++||+|+ |++|..+++.+...|++ |+++ .++.++.+.+ .+++....+-..|..+.+++.+.+.++..  +.++|
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGAR-VVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            468999999 99999999999999998 5554 4455554443 33443333333444556666666665432  33499


Q ss_pred             eEEEcccc
Q psy1413         392 KTIDCSGI  399 (408)
Q Consensus       392 ~i~d~~g~  399 (408)
                      ++|++.|.
T Consensus        84 ~li~~ag~   91 (253)
T PRK08642         84 TVVNNALA   91 (253)
T ss_pred             EEEECCCc
Confidence            99999875

>PRK07775 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0043  Score=57.39  Aligned_cols=84  Identities=15%  Similarity=0.156  Sum_probs=59.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      +..+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+....+-.-|..+.+++.+.+.++.. ..+
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFP-VALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3468999999 99999999999999996 88888876655433    23354433333455566777777766532 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+|+++|..
T Consensus        88 id~vi~~Ag~~   98 (274)
T PRK07775         88 IEVLVSGAGDT   98 (274)
T ss_pred             CCEEEECCCcC
Confidence            89999999864

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.14  E-value=0.0037  Score=56.44  Aligned_cols=83  Identities=24%  Similarity=0.224  Sum_probs=55.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++++...|++ |+++.++.. +.+    .++..+....+...|..+.+++.+.+.++.. ..
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3468999999 99999999999999998 655555543 222    2233344433333444556666666665543 24


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|.+|+++|.
T Consensus        83 ~id~vi~~ag~   93 (248)
T PRK05557         83 GVDILVNNAGI   93 (248)
T ss_pred             CCCEEEECCCc
Confidence            78999999985

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0038  Score=58.34  Aligned_cols=85  Identities=18%  Similarity=0.198  Sum_probs=59.0

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-HH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-LK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      -.+.++||+|+ |++|..+++.+...|++ |++++++..+ .+    .++..|....+...|..+.+++.+.+.++.. .
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGAD-IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34678999999 99999999999999997 7778776432 22    2233454444444555566777777666543 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus       123 ~~iD~lI~~Ag~~  135 (290)
T PRK06701        123 GRLDILVNNAAFQ  135 (290)
T ss_pred             CCCCEEEECCccc
Confidence            4789999999853

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.13  E-value=0.0043  Score=56.30  Aligned_cols=83  Identities=19%  Similarity=0.226  Sum_probs=59.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      ++.++||+|+ |++|..+++.+...|++ |++++++.++.+.+    ++.+....+-.-+..+.+++++.+.++.. ..+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAK-VAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999 99999999999999997 88888887665443    22343333333444456677777666543 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|++.|.
T Consensus        81 ~d~vi~~ag~   90 (250)
T TIGR03206        81 VDVLVNNAGW   90 (250)
T ss_pred             CCEEEECCCC
Confidence            8999999985

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=97.12  E-value=0.0041  Score=56.59  Aligned_cols=82  Identities=29%  Similarity=0.366  Sum_probs=58.0

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      .++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+    .+....+-.-|..+.+++.+.+.++.. ..++|
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGAN-VVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999 99999999999999996 8989998776655432    333333333344455666666655532 34689


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      .+|.+.|..
T Consensus        81 ~vi~~a~~~   89 (255)
T TIGR01963        81 ILVNNAGIQ   89 (255)
T ss_pred             EEEECCCCC
Confidence            999998754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.11  E-value=0.0034  Score=57.53  Aligned_cols=84  Identities=18%  Similarity=0.199  Sum_probs=58.1

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecCh---hhHHHH-HHc-CCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILE---HKLKTA-KEM-GADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~---~~~~~~-~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+   +++|..+++.+...|++ |++++|+.   ++++.+ +++ +.......-|..+.+++++.+.++.. 
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAK-LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            4678999997   49999999999999997 77776643   334433 333 32333334455667777777777654 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      -.++|++++++|..
T Consensus        85 ~g~ld~lv~nag~~   98 (257)
T PRK08594         85 VGVIHGVAHCIAFA   98 (257)
T ss_pred             CCCccEEEECcccC
Confidence            25799999999853

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0047  Score=56.46  Aligned_cols=83  Identities=17%  Similarity=0.153  Sum_probs=56.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ ++++.+ +.++.+.+    +..+....+...|..+.+++.+.+.++.. ..
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFD-VAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999 99999999999999997 555544 44444332    22344433334455556777776666532 24


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|++|++.|.
T Consensus        87 ~iD~vi~~ag~   97 (258)
T PRK09134         87 PITLLVNNASL   97 (258)
T ss_pred             CCCEEEECCcC
Confidence            79999999985

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=97.10  E-value=0.0041  Score=56.39  Aligned_cols=83  Identities=20%  Similarity=0.285  Sum_probs=56.4

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcC-CC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQG-EQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~  389 (408)
                      +.+++|+|+ |++|..+++.+...|++ ++++ .+++++.+..    ++.+....+-.-|..+.+++.+.+.++... ..
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGAK-VVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            679999999 99999999999999998 5544 3444444332    334444433344555566676666665432 46


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+|+++|..
T Consensus        85 id~vi~~ag~~   95 (247)
T PRK12935         85 VDILVNNAGIT   95 (247)
T ss_pred             CCEEEECCCCC
Confidence            89999999863

>KOG1209|consensus

Probab=97.10  E-value=0.0019  Score=55.67  Aligned_cols=87  Identities=20%  Similarity=0.177  Sum_probs=64.7

Q ss_pred             CCCCEEEEEec--chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcC-CCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         315 TLGSKVLITGA--GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMG-ADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       315 ~~~~~~lv~G~--G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~g-a~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      +....+||+|+  ||+|..++.-....|.+ |++++|+-+..+.+. ++| -..-+|-.++.+...+...+++.+ .+..
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~-V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~-~Gkl   82 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYL-VYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANP-DGKL   82 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeE-EEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCC-CCce
Confidence            34567899986  99999999999999998 999999988877664 677 344566655444555566666665 3479


Q ss_pred             ceEEEcccchhhh
Q psy1413         391 DKTIDCSGIESTI  403 (408)
Q Consensus       391 d~i~d~~g~~~~~  403 (408)
                      |+.+|..|.+-++
T Consensus        83 d~L~NNAG~~C~~   95 (289)
T KOG1209|consen   83 DLLYNNAGQSCTF   95 (289)
T ss_pred             EEEEcCCCCCccc
Confidence            9999988865443

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0039  Score=56.43  Aligned_cols=80  Identities=18%  Similarity=0.128  Sum_probs=57.0

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH---c-CCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE---M-GADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~---~-ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      .+++|+|+ |++|..+++.+...|++ |++++|++++.+.. ++   . +....+-..|..+.+++++.+.++.  ..+|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~--~~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGAR-LYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP--ALPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh--hcCC
Confidence            47999999 99999999999999987 88899988766443 22   1 2222233344455677777777664  3579


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      .+++++|..
T Consensus        79 ~vv~~ag~~   87 (243)
T PRK07102         79 IVLIAVGTL   87 (243)
T ss_pred             EEEECCcCC
Confidence            999988753

>PRK06398 aldose dehydrogenase; Validated

Probab=97.09  E-value=0.0025  Score=58.38  Aligned_cols=76  Identities=21%  Similarity=0.248  Sum_probs=54.5

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~  394 (408)
                      +.++||+|+ |++|..+++.+...|++ |++++|++.+..       ...+-..|..+.+++++.+.++.. ..++|++|
T Consensus         6 gk~vlItGas~gIG~~ia~~l~~~G~~-Vi~~~r~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          6 DKVAIVTGGSQGIGKAVVNRLKEEGSN-VINFDIKEPSYN-------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCccccC-------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999999 99999999999999997 888888765432       111222344455666666666543 24699999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      ++.|..
T Consensus        78 ~~Ag~~   83 (258)
T PRK06398         78 NNAGIE   83 (258)
T ss_pred             ECCCCC
Confidence            999853

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.08  E-value=0.0038  Score=62.89  Aligned_cols=83  Identities=17%  Similarity=0.194  Sum_probs=56.7

Q ss_pred             ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH---------cCCC----eEEecCCCCChHH
Q psy1413         311 RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE---------MGAD----ATVLIDRNHSLEE  376 (408)
Q Consensus       311 ~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~---------~ga~----~~i~~~~~~~~~~  376 (408)
                      ....+.++++||+|+ |++|+.+++.+...|++ |++++|+.++.+.+.+         .|..    ..+...|..+.++
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~-Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            455678899999999 99999999999999997 8888899887654322         1211    1222233333444


Q ss_pred             HHHHHHHHhcCCCCceEEEcccch
Q psy1413         377 ISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       377 ~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +.+    +.  +++|++|++.|..
T Consensus       153 I~~----aL--ggiDiVVn~AG~~  170 (576)
T PLN03209        153 IGP----AL--GNASVVICCIGAS  170 (576)
T ss_pred             HHH----Hh--cCCCEEEEccccc
Confidence            433    22  4799999999864

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0029  Score=57.74  Aligned_cols=77  Identities=18%  Similarity=0.165  Sum_probs=51.6

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      +.++||+|+ |++|..+++.+...|++ |++++|+..+.+.+.    +.+....+..-|..+.+++.+.+     ..++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-----~~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHN-VIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAA-----EWDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHh-----cCCCC
Confidence            357999999 99999999999999987 888888876654442    23333222222323334443322     23799


Q ss_pred             eEEEcccc
Q psy1413         392 KTIDCSGI  399 (408)
Q Consensus       392 ~i~d~~g~  399 (408)
                      .+|++.|.
T Consensus        76 ~vi~~ag~   83 (257)
T PRK09291         76 VLLNNAGI   83 (257)
T ss_pred             EEEECCCc
Confidence            99999884

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.08  E-value=0.0038  Score=57.27  Aligned_cols=83  Identities=22%  Similarity=0.163  Sum_probs=57.4

Q ss_pred             CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChh---hHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEH---KLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~---~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +  ++|..+++.+...|++ |++.++++.   +.+.+ ++.|.... ..-|..+.+++++.+.++.. .
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~-v~~~~r~~~~~~~~~~l~~~~g~~~~-~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAE-LWFTYQSEVLEKRVKPLAEEIGCNFV-SELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCE-EEEEeCchHHHHHHHHHHHhcCCceE-EEccCCCHHHHHHHHHHHHHHc
Confidence            4678999998 5  8999999999889997 777777642   22222 23354332 23455566777777777654 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      ..+|+++++.|..
T Consensus        85 g~iDilVnnag~~   97 (260)
T PRK06603         85 GSFDFLLHGMAFA   97 (260)
T ss_pred             CCccEEEEccccC
Confidence            4799999998853

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.07  E-value=0.004  Score=57.04  Aligned_cols=83  Identities=17%  Similarity=0.174  Sum_probs=58.6

Q ss_pred             CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChhhH---HHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEHKL---KTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~~~---~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +  ++|..+++.+...|++ |++++|+.+..   +.+ ++++.... ...|..+.+++++.+.++.. .
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~~~~~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAE-LAVTYLNDKARPYVEPLAEELDAPIF-LPLDVREPGQLEAVFARIAEEW   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHHHhhccceE-EecCcCCHHHHHHHHHHHHHHc
Confidence            4678999997 3  8999999999999997 88888875432   222 33443222 23455667788877777654 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      +++|++++++|..
T Consensus        87 g~ld~lv~nAg~~   99 (258)
T PRK07533         87 GRLDFLLHSIAFA   99 (258)
T ss_pred             CCCCEEEEcCccC
Confidence            4799999999853

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.07  E-value=0.0046  Score=56.86  Aligned_cols=83  Identities=19%  Similarity=0.218  Sum_probs=57.6

Q ss_pred             CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChh---hHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEH---KLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~---~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +  ++|..+++.+...|++ |++.++++.   ..+.+.+ .+.... ...|..+.+++++.+.++.. .
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~-vil~~r~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIV-LPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCE-EEEEecchhHHHHHHHHHhccCCceE-eecCCCCHHHHHHHHHHHHhhc
Confidence            4678999998 4  8999999999999997 887877632   2223322 232222 23455667888888877654 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      ..+|++|+++|..
T Consensus        83 g~iD~linnAg~~   95 (262)
T PRK07984         83 PKFDGFVHSIGFA   95 (262)
T ss_pred             CCCCEEEECCccC
Confidence            4699999999853

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=97.07  E-value=0.0047  Score=55.89  Aligned_cols=83  Identities=22%  Similarity=0.194  Sum_probs=57.4

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      +++||+|+ |++|..+++.+...|++.++...++.++.+.    ++..+....+-..|..+.+++.+.+.++.. ..++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            47899999 9999999999999999833334566555432    233444333334455566777777777642 45799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      .+|+++|..
T Consensus        82 ~vi~~ag~~   90 (247)
T PRK09730         82 ALVNNAGIL   90 (247)
T ss_pred             EEEECCCCC
Confidence            999999853

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=97.06  E-value=0.0045  Score=56.15  Aligned_cols=82  Identities=26%  Similarity=0.219  Sum_probs=56.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      +++||+|+ |++|..+++.+...|++ ++++ .++.++.+.    +++.+....+-..|..+.+++.+.+.++.. ..++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWS-VGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            47999999 99999999999999998 5544 455554433    233444444444455566777777766543 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|+++|..
T Consensus        82 d~li~~ag~~   91 (248)
T PRK06947         82 DALVNNAGIV   91 (248)
T ss_pred             CEEEECCccC
Confidence            9999999854

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.06  E-value=0.0044  Score=57.41  Aligned_cols=83  Identities=19%  Similarity=0.168  Sum_probs=59.1

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecChh---hHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILEH---KLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~~---~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+   +++|+.+++.+...|++ |++++|++.   +.+.+ ++++.... -.-|..+.+++++.+.++.. .
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~-~~~Dv~d~~~v~~~~~~i~~~~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAE-LAFTYLNEALKKRVEPIAQELGSDYV-YELDVSKPEHFKSLAESLKKDL   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEecCHHHHHHHHHHHHhcCCceE-EEecCCCHHHHHHHHHHHHHHc
Confidence            3678999997   49999999999999997 888888742   33333 44554432 23455566777777777654 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      ..+|+++++.|..
T Consensus        82 g~iDilVnnAG~~   94 (274)
T PRK08415         82 GKIDFIVHSVAFA   94 (274)
T ss_pred             CCCCEEEECCccC
Confidence            5799999999863

>PRK12742 oxidoreductase; Provisional

Probab=97.05  E-value=0.0033  Score=56.54  Aligned_cols=79  Identities=23%  Similarity=0.241  Sum_probs=53.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ ++++.+ +.++.+.+ ++.+...+ . -|..+.+++.+.+.+   ..++|+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~~-~-~D~~~~~~~~~~~~~---~~~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSKDAAERLAQETGATAV-Q-TDSADRDAVIDVVRK---SGALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHhCCeEE-e-cCCCCHHHHHHHHHH---hCCCcE
Confidence            3678999999 99999999999999997 666654 44555444 44555432 1 222334455555543   247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        79 li~~ag~~   86 (237)
T PRK12742         79 LVVNAGIA   86 (237)
T ss_pred             EEECCCCC
Confidence            99999864

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.04  E-value=0.0047  Score=55.58  Aligned_cols=80  Identities=24%  Similarity=0.215  Sum_probs=57.4

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH-HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL-KTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .+++||+|+ |++|..+++.+...|++ |++++|+.++. +.+++.|+. .+ ..|..+.+++++.+.++.. ..++|.+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~-~~-~~D~~~~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQP-VIVSYRTHYPAIDGLRQAGAQ-CI-QADFSTNAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCE-EE-EcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence            357999999 99999999999999997 88888876543 444555542 22 2344456677777766643 2469999


Q ss_pred             EEcccc
Q psy1413         394 IDCSGI  399 (408)
Q Consensus       394 ~d~~g~  399 (408)
                      +++.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            999985

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0035  Score=56.55  Aligned_cols=83  Identities=20%  Similarity=0.296  Sum_probs=53.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-H---HcCC-C---eEEecCCCCChHHHHHHHHHHhc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-K---EMGA-D---ATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~---~~ga-~---~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      ++.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+ .   +.+. +   ..+|..+ .+.+++.+.+.++..
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~i~~   82 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGAT-VILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMS-AEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCE-EEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecc-cchHHHHHHHHHHHH
Confidence            3578999999 99999999999999997 99999988776543 2   2221 1   1133221 112334443333322


Q ss_pred             --CCCCceEEEcccch
Q psy1413         387 --GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 --~~~~d~i~d~~g~~  400 (408)
                        ...+|.+|+++|..
T Consensus        83 ~~~~~id~vi~~ag~~   98 (239)
T PRK08703         83 ATQGKLDGIVHCAGYF   98 (239)
T ss_pred             HhCCCCCEEEEecccc
Confidence              13689999999853

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.0037  Score=57.17  Aligned_cols=78  Identities=21%  Similarity=0.173  Sum_probs=54.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+..+.     .+....+...|..+.+++++.+.++.. ..++|++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   81 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGAR-VVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL   81 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCE-EEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999 99999999999999997 88888875432     222222233344455666666655533 2479999


Q ss_pred             EEcccc
Q psy1413         394 IDCSGI  399 (408)
Q Consensus       394 ~d~~g~  399 (408)
                      |++.|.
T Consensus        82 i~~ag~   87 (260)
T PRK06523         82 VHVLGG   87 (260)
T ss_pred             EECCcc
Confidence            999984

>KOG1201|consensus

Probab=97.03  E-value=0.005  Score=56.21  Aligned_cols=84  Identities=25%  Similarity=0.280  Sum_probs=59.1

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH----HHHHHcCCCeEEe-cCCCCChHHHHHHHHHHhcC-
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL----KTAKEMGADATVL-IDRNHSLEEISTHIIELLQG-  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~----~~~~~~ga~~~i~-~~~~~~~~~~~~~~~~~~~~-  387 (408)
                      -.++.+||+|+ +|+|+.+++-...+|++ +++.|.+.+-.    ++.++.|  .+.. ..|.++.+++.+..++.... 
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~-~vl~Din~~~~~etv~~~~~~g--~~~~y~cdis~~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAK-LVLWDINKQGNEETVKEIRKIG--EAKAYTCDISDREEIYRLAKKVKKEV  112 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCe-EEEEeccccchHHHHHHHHhcC--ceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            46689999998 99999999999999995 88888875443    3344445  1111 23344567777766666542 


Q ss_pred             CCCceEEEcccchh
Q psy1413         388 EQPDKTIDCSGIES  401 (408)
Q Consensus       388 ~~~d~i~d~~g~~~  401 (408)
                      +.+|+++|.+|...
T Consensus       113 G~V~ILVNNAGI~~  126 (300)
T KOG1201|consen  113 GDVDILVNNAGIVT  126 (300)
T ss_pred             CCceEEEecccccc
Confidence            47899999999754

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.0031  Score=56.61  Aligned_cols=76  Identities=21%  Similarity=0.250  Sum_probs=55.4

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      +++++|+|+ |++|..+++.+...|.+ |++++|+..+     .+.. .++ .-|..+.+++++.+.++....++|.+|+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~-v~~~~r~~~~-----~~~~-~~~-~~D~~~~~~~~~~~~~~~~~~~~d~vi~   74 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQ-VIGIARSAID-----DFPG-ELF-ACDLADIEQTAATLAQINEIHPVDAIVN   74 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCccc-----ccCc-eEE-EeeCCCHHHHHHHHHHHHHhCCCcEEEE
Confidence            568999999 99999999999999986 8888887654     1121 222 2233445777777777665557899999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      +.|..
T Consensus        75 ~ag~~   79 (234)
T PRK07577         75 NVGIA   79 (234)
T ss_pred             CCCCC
Confidence            99863

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.01  E-value=0.0032  Score=61.54  Aligned_cols=76  Identities=18%  Similarity=0.277  Sum_probs=56.9

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      -.+.+++|+|+|+.|..++..+...|+.++.++.|+.++.+.+ ++++...++.+      +++.+.+      ..+|+|
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~------~~l~~~l------~~aDiV  246 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL------SELPQLI------KKADII  246 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH------HHHHHHh------ccCCEE
Confidence            3567899999999999999999999999899999998886655 55652223322      3332222      358999


Q ss_pred             EEcccchhh
Q psy1413         394 IDCSGIEST  402 (408)
Q Consensus       394 ~d~~g~~~~  402 (408)
                      |+|++.++.
T Consensus       247 I~aT~a~~~  255 (414)
T PRK13940        247 IAAVNVLEY  255 (414)
T ss_pred             EECcCCCCe
Confidence            999998765

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.00  E-value=0.0046  Score=56.68  Aligned_cols=84  Identities=23%  Similarity=0.201  Sum_probs=56.0

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecC------hhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDIL------EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~------~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      .+++++|+|+   +++|+.+++.+...|++ |+++.++      ++..+.+.+.+.......-|..+.+++++.+.++..
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            4678999996   49999999999999998 6666443      222333333332222233455566777777776643


Q ss_pred             -CCCCceEEEcccch
Q psy1413         387 -GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 -~~~~d~i~d~~g~~  400 (408)
                       ..++|+++++.|..
T Consensus        84 ~~g~iD~lv~nag~~   98 (258)
T PRK07370         84 KWGKLDILVHCLAFA   98 (258)
T ss_pred             HcCCCCEEEEccccc
Confidence             24799999999854

>PRK07985 oxidoreductase; Provisional

Probab=96.99  E-value=0.0052  Score=57.55  Aligned_cols=83  Identities=20%  Similarity=0.165  Sum_probs=57.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh--hhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE--HKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~--~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .+.++||+|+ |++|..+++.+...|++ |+++.++.  ++.+.+    ++.|....+...|..+.+++.+.+.++.. .
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4578999999 99999999999999998 77766542  233322    33454433334455566777777776643 3


Q ss_pred             CCCceEEEcccc
Q psy1413         388 EQPDKTIDCSGI  399 (408)
Q Consensus       388 ~~~d~i~d~~g~  399 (408)
                      +++|+++++.|.
T Consensus       127 g~id~lv~~Ag~  138 (294)
T PRK07985        127 GGLDIMALVAGK  138 (294)
T ss_pred             CCCCEEEECCCC
Confidence            579999999885

>KOG0725|consensus

Probab=96.98  E-value=0.0059  Score=56.26  Aligned_cols=86  Identities=21%  Similarity=0.251  Sum_probs=63.3

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCC---eEEecCCCCChHHHHHHHHHHhc
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGAD---ATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~---~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      -.+.++||+|+ .|+|..+++.+...|++ |++++|+.++.+..+    ..+.+   ......|..+.++.++.+.....
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAK-VVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            35678899999 99999999999999998 888999988765432    23332   34444555556777777777655


Q ss_pred             C--CCCceEEEcccchh
Q psy1413         387 G--EQPDKTIDCSGIES  401 (408)
Q Consensus       387 ~--~~~d~i~d~~g~~~  401 (408)
                      .  +.+|+.+++.|...
T Consensus        85 ~~~GkidiLvnnag~~~  101 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALG  101 (270)
T ss_pred             HhCCCCCEEEEcCCcCC
Confidence            3  57999999998654

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0035  Score=57.72  Aligned_cols=79  Identities=19%  Similarity=0.187  Sum_probs=56.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~  394 (408)
                      +.+++|+|+ |++|..+++.+...|++ |++++|+.++.+..  .+..  +-.-|..+.+++++.+.++.. ...+|++|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~~~~~--~~~~--~~~~D~~d~~~~~~~~~~~~~~~g~~d~li   78 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYR-VFGTSRNPARAAPI--PGVE--LLELDVTDDASVQAAVDEVIARAGRIDVLV   78 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCChhhcccc--CCCe--eEEeecCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            468999999 99999999999999997 88888886654422  1222  112334456777777766543 24699999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      ++.|..
T Consensus        79 ~~ag~~   84 (270)
T PRK06179         79 NNAGVG   84 (270)
T ss_pred             ECCCCC
Confidence            999863

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.97  E-value=0.0053  Score=56.34  Aligned_cols=83  Identities=23%  Similarity=0.319  Sum_probs=58.2

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecChh---hHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILEH---KLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~~---~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+   +++|+.+++.+...|++ |++..+++.   +++.+. +.|... ....|..+.+++++.+.++.. .
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAE-LAFTYVVDKLEERVRKMAAELDSEL-VFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCcHHHHHHHHHHHhccCCce-EEECCCCCHHHHHHHHHHHHHHh
Confidence            4678999994   59999999999999997 777766543   233332 234322 334566677888888877654 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++++++|..
T Consensus        83 g~iD~lVnnAG~~   95 (261)
T PRK08690         83 DGLDGLVHSIGFA   95 (261)
T ss_pred             CCCcEEEECCccC
Confidence            5799999999864

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0054  Score=54.84  Aligned_cols=75  Identities=21%  Similarity=0.254  Sum_probs=55.6

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      +++|+|+ |++|+.+++.+...|++ |++++|+.++++.+ ++++...+  ..|..+.+++++.++++.  +.+|.++++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~--~~D~~~~~~v~~~~~~~~--~~id~lv~~   76 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHK-VTLVGARRDDLEVAAKELDVDAI--VCDNTDPASLEEARGLFP--HHLDTIVNV   76 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhccCcEE--ecCCCCHHHHHHHHHHHh--hcCcEEEEC
Confidence            4899999 99999999999999997 88889988877655 44444322  234445667777766654  368999999


Q ss_pred             cc
Q psy1413         397 SG  398 (408)
Q Consensus       397 ~g  398 (408)
                      .|
T Consensus        77 ag   78 (223)
T PRK05884         77 PA   78 (223)
T ss_pred             CC
Confidence            77

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.97  E-value=0.0067  Score=54.81  Aligned_cols=83  Identities=29%  Similarity=0.360  Sum_probs=57.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      +.++||+|+ |++|..+++.+...|++ ++++ +|+.++.+.+.    ..+....+...|..+.+++.+.+.++.. ..+
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAK-VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK   83 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            468999999 99999999999889998 6666 88776654332    2233333444455556666666655432 236


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|.+.|..
T Consensus        84 id~vi~~ag~~   94 (247)
T PRK05565         84 IDILVNNAGIS   94 (247)
T ss_pred             CCEEEECCCcC
Confidence            99999998854

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.96  E-value=0.0066  Score=52.26  Aligned_cols=69  Identities=17%  Similarity=0.219  Sum_probs=49.9

Q ss_pred             EEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEccc
Q psy1413         320 VLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG  398 (408)
Q Consensus       320 ~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g  398 (408)
                      ++|+|+ |.+|..+++.+...|.+ |.++.|++++.+.  ..+.+. + .-+..+.+++.+.+      +++|.||++.|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~-V~~~~R~~~~~~~--~~~~~~-~-~~d~~d~~~~~~al------~~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHE-VTALVRSPSKAED--SPGVEI-I-QGDLFDPDSVKAAL------KGADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSE-EEEEESSGGGHHH--CTTEEE-E-ESCTTCHHHHHHHH------TTSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCE-EEEEecCchhccc--cccccc-c-eeeehhhhhhhhhh------hhcchhhhhhh
Confidence            689999 99999999999999976 9999999998877  333332 2 22323333333333      27999999997


Q ss_pred             c
Q psy1413         399 I  399 (408)
Q Consensus       399 ~  399 (408)
                      .
T Consensus        70 ~   70 (183)
T PF13460_consen   70 P   70 (183)
T ss_dssp             S
T ss_pred             h
Confidence            4

...

>KOG1014|consensus

Probab=96.96  E-value=0.0047  Score=56.62  Aligned_cols=83  Identities=22%  Similarity=0.306  Sum_probs=60.5

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-----HHcCCC---eEEecCCCCChHHHHHHHHHHh
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-----KEMGAD---ATVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-----~~~ga~---~~i~~~~~~~~~~~~~~~~~~~  385 (408)
                      +-+++.+|+|+ .|+|.+-+.=+..+|.+ |++++|+.+|++..     +..++.   .++|+.+   .+..-+.+++.+
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~n-vvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~---~~~~ye~i~~~l  122 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFN-VVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK---GDEVYEKLLEKL  122 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC---CchhHHHHHHHh
Confidence            34588999999 99999999888889998 99999999998654     234422   2355544   222455566666


Q ss_pred             cCCCCceEEEcccchh
Q psy1413         386 QGEQPDKTIDCSGIES  401 (408)
Q Consensus       386 ~~~~~d~i~d~~g~~~  401 (408)
                      ++-.+-+.+|++|-..
T Consensus       123 ~~~~VgILVNNvG~~~  138 (312)
T KOG1014|consen  123 AGLDVGILVNNVGMSY  138 (312)
T ss_pred             cCCceEEEEecccccC
Confidence            6778889999999654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.95  E-value=0.0071  Score=54.60  Aligned_cols=82  Identities=21%  Similarity=0.265  Sum_probs=54.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      ..++||+|+ |++|..+++.+...|.+ ++++.++ ....+.+    .+.+....+...|..+.+++.+.+.+... ..+
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGAD-VVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            468999999 99999999999999997 5555454 3333322    23343333333444456667766665532 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|.+|+++|.
T Consensus        85 id~vi~~ag~   94 (249)
T PRK12825         85 IDILVNNAGI   94 (249)
T ss_pred             CCEEEECCcc
Confidence            9999999984

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.93  E-value=0.0076  Score=55.18  Aligned_cols=84  Identities=23%  Similarity=0.230  Sum_probs=57.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ ++++.++. ++.+    .++..+....+...|..+.+++.+.+..+.. ..
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~-vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAK-VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4679999999 99999999999999998 66666643 3322    2233454333333445556777776666543 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|+++++.|..
T Consensus        85 ~id~lv~~ag~~   96 (261)
T PRK08936         85 TLDVMINNAGIE   96 (261)
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.92  E-value=0.008  Score=54.16  Aligned_cols=82  Identities=22%  Similarity=0.211  Sum_probs=54.9

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH-HH---cCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA-KE---MGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~-~~---~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .++||+|+ |++|..+++.+...|++ ++++.+ +..+.+.. .+   .+....+...|..+.+++.+.+.++.. ...+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYR-VAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999 99999999999999997 666666 44443322 22   233333333444556667776666532 2468


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |.+|++.|..
T Consensus        80 d~vi~~ag~~   89 (242)
T TIGR01829        80 DVLVNNAGIT   89 (242)
T ss_pred             cEEEECCCCC
Confidence            9999999853

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05599 hypothetical protein; Provisional

Probab=96.91  E-value=0.0072  Score=54.92  Aligned_cols=80  Identities=18%  Similarity=0.152  Sum_probs=55.2

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCC-eEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGAD-ATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~-~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      +++|+|+ +++|..+++.+. .|++ |++++|+.++++.+    ++.|.+ ...-.-|..+.+++++.+.++.. .+++|
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGED-VVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCE-EEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999 999999999887 5876 88889988776544    334433 22223344555666666655533 24799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +++++.|..
T Consensus        80 ~lv~nag~~   88 (246)
T PRK05599         80 LAVVAFGIL   88 (246)
T ss_pred             EEEEecCcC
Confidence            999999864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.91  E-value=0.0074  Score=55.29  Aligned_cols=83  Identities=16%  Similarity=0.108  Sum_probs=57.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH-H----HcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA-K----EMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~-~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +++|..+++.+...|++ |+++.+ +.++.+.. +    +.+....+-.-|..+.+++++.+.++.. .
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4678999999 99999999999999998 766654 44444322 2    2343333333445566777777777643 2


Q ss_pred             CCCceEEEcccc
Q psy1413         388 EQPDKTIDCSGI  399 (408)
Q Consensus       388 ~~~d~i~d~~g~  399 (408)
                      ..+|+++++.|.
T Consensus        86 g~id~lv~nAg~   97 (260)
T PRK08416         86 DRVDFFISNAII   97 (260)
T ss_pred             CCccEEEECccc
Confidence            479999999874

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.90  E-value=0.0061  Score=58.91  Aligned_cols=73  Identities=29%  Similarity=0.360  Sum_probs=52.4

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      ..+++|+|+|.+|+.+++.++.+|++ |++++++.++++.+. .++........   +.+++.+.+      +.+|++|+
T Consensus       167 ~~~VlViGaG~vG~~aa~~a~~lGa~-V~v~d~~~~~~~~l~~~~g~~v~~~~~---~~~~l~~~l------~~aDvVI~  236 (370)
T TIGR00518       167 PGDVTIIGGGVVGTNAAKMANGLGAT-VTILDINIDRLRQLDAEFGGRIHTRYS---NAYEIEDAV------KRADLLIG  236 (370)
T ss_pred             CceEEEEcCCHHHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHhcCceeEeccC---CHHHHHHHH------ccCCEEEE
Confidence            35589999999999999999999996 999999988887764 45554322222   223343333      36899999


Q ss_pred             cccc
Q psy1413         396 CSGI  399 (408)
Q Consensus       396 ~~g~  399 (408)
                      |++.
T Consensus       237 a~~~  240 (370)
T TIGR00518       237 AVLI  240 (370)
T ss_pred             cccc
Confidence            9843

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK07023 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.0055  Score=55.42  Aligned_cols=80  Identities=15%  Similarity=0.127  Sum_probs=54.5

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH-H----hcCCCCce
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE-L----LQGEQPDK  392 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~-~----~~~~~~d~  392 (408)
                      ++||+|+ |++|..+++.+...|++ |++++|+..+. ..+..+....+-.-|..+.+++++.+.+ .    ......|.
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~-v~~~~r~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIA-VLGVARSRHPS-LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCE-EEEEecCcchh-hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            6899999 99999999999999997 88888876542 2233444333333444556667665544 2    12346899


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|++.|..
T Consensus        81 ~v~~ag~~   88 (243)
T PRK07023         81 LINNAGTV   88 (243)
T ss_pred             EEEcCccc
Confidence            99998854

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=96.89  E-value=0.0088  Score=56.57  Aligned_cols=83  Identities=23%  Similarity=0.275  Sum_probs=58.2

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC---CCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG---ADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      +.++||+|+ +++|..+++.+...|+.+|++++|+.++.+.+ +++.   ....+..-|..+.+++++.+.++.. ..++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            568999999 99999999999999933488899988776544 3332   2222222344556677777666533 3479


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |++|+++|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999999986

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.89  E-value=0.0049  Score=56.61  Aligned_cols=79  Identities=25%  Similarity=0.336  Sum_probs=55.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++++..+.+.     ....+-.-|..+.+++++.+.++.. ..++|.+
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~-v~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGAN-VVNADIHGGDGQH-----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGL   81 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcccccc-----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999 99999999999999998 7778777654321     1112222344456677777666543 2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |++.|..
T Consensus        82 i~~Ag~~   88 (266)
T PRK06171         82 VNNAGIN   88 (266)
T ss_pred             EECCccc
Confidence            9999853

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.89  E-value=0.0072  Score=54.91  Aligned_cols=79  Identities=22%  Similarity=0.195  Sum_probs=56.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++++.     ....+....+-..|..+.+++.+.+.++.. ..++|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~-v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAK-VIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4578999999 99999999999999997 88888765     222233223333444556777777666543 2468999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |++.|..
T Consensus        81 i~~ag~~   87 (252)
T PRK08220         81 VNAAGIL   87 (252)
T ss_pred             EECCCcC
Confidence            9998864

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.008  Score=54.44  Aligned_cols=83  Identities=19%  Similarity=0.198  Sum_probs=56.7

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe-cChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITD-ILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~-~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      ++++||+|+ |++|..+++.+...|++ +++.. +++++.+.    ++..+....+...|..+.+++.+.+.++.. ...
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYA-VCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCe-EEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            468999999 99999999999999987 66554 44444332    333454443334444556777777766543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|.+|++.|..
T Consensus        81 id~li~~ag~~   91 (248)
T PRK06123         81 LDALVNNAGIL   91 (248)
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.89  E-value=0.0066  Score=55.55  Aligned_cols=84  Identities=21%  Similarity=0.249  Sum_probs=58.6

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecCh--hhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILE--HKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~--~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+++++|+|+   +++|..+++.+...|++ |++++|+.  +..+.+ ++++........|..+.+++++.+.++.. ..
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAE-VVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD   84 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCE-EEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3578999985   79999999999999997 88887653  333333 44443322333455566777777776643 25


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++++++|..
T Consensus        85 ~iD~li~nAG~~   96 (256)
T PRK07889         85 GLDGVVHSIGFA   96 (256)
T ss_pred             CCcEEEEccccc
Confidence            799999999864

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.89  E-value=0.0073  Score=63.23  Aligned_cols=84  Identities=24%  Similarity=0.269  Sum_probs=60.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-H----cCCC-eEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-E----MGAD-ATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~----~ga~-~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++++.++.+.+. +    .+.. .....-|..+.+++.+.+.++.. .
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~-Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAH-VVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4689999999 99999999999999996 888999877665432 2    2322 22223444556777777766543 3


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus       492 g~iDilV~nAG~~  504 (676)
T TIGR02632       492 GGVDIVVNNAGIA  504 (676)
T ss_pred             CCCcEEEECCCCC
Confidence            4799999999853

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.0088  Score=54.08  Aligned_cols=84  Identities=23%  Similarity=0.272  Sum_probs=56.7

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec----ChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDI----LEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~----~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      +.+++|+|+ |++|+.+++.+...|++ ++++++    +.++.+.    ....+....+...|..+.+++++.+.++.. 
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGAD-VIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCe-EEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            568999999 99999999999999998 666544    2333332    223344433444455556777777766543 


Q ss_pred             CCCCceEEEcccchh
Q psy1413         387 GEQPDKTIDCSGIES  401 (408)
Q Consensus       387 ~~~~d~i~d~~g~~~  401 (408)
                      ..++|.+|+++|...
T Consensus        85 ~~~~d~vi~~ag~~~   99 (249)
T PRK12827         85 FGRLDILVNNAGIAT   99 (249)
T ss_pred             hCCCCEEEECCCCCC
Confidence            247999999998643

>KOG2017|consensus

Probab=96.88  E-value=0.0027  Score=58.60  Aligned_cols=81  Identities=26%  Similarity=0.277  Sum_probs=54.5

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC-------------------hhh----HHHHHHcCCC-eEEecCCC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL-------------------EHK----LKTAKEMGAD-ATVLIDRN  371 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~-------------------~~~----~~~~~~~ga~-~~i~~~~~  371 (408)
                      .++.|||+|+||+|.-++|++.+.|+.++=+++-+                   ..|    ...++.+..+ ++..+...
T Consensus        65 k~s~VLVVGaGGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs~v~v~~y~~~  144 (427)
T KOG2017|consen   65 KNSSVLVVGAGGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNSHVEVQTYNEF  144 (427)
T ss_pred             CCccEEEEccCCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCceeeechhh
Confidence            34679999999999999999999999987666532                   111    2233444433 33334444


Q ss_pred             CChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         372 HSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      .+.+++.+.+      +++|+|+||+-+..+
T Consensus       145 L~~sNa~~Ii------~~YdvVlDCTDN~~T  169 (427)
T KOG2017|consen  145 LSSSNAFDII------KQYDVVLDCTDNVPT  169 (427)
T ss_pred             ccchhHHHHh------hccceEEEcCCCccc
Confidence            4445555444      579999999987765

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.0071  Score=53.89  Aligned_cols=78  Identities=19%  Similarity=0.178  Sum_probs=53.0

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      .++||+|+ |.+|..+++.+... . +|++++|+.++.+.+.+......+..-|..+.+++.+.+...   .++|.+|++
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---~~id~vi~~   78 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL---GRLDVLVHN   78 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc---CCCCEEEEC
Confidence            57999999 99999999988877 5 499999988776655432112222233434455555555432   279999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +|..
T Consensus        79 ag~~   82 (227)
T PRK08219         79 AGVA   82 (227)
T ss_pred             CCcC
Confidence            9864

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.87  E-value=0.0087  Score=54.26  Aligned_cols=86  Identities=21%  Similarity=0.256  Sum_probs=57.6

Q ss_pred             cCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCe--EEecCC-CCChHHHHHHHHHHh
Q psy1413         314 VTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADA--TVLIDR-NHSLEEISTHIIELL  385 (408)
Q Consensus       314 ~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~--~i~~~~-~~~~~~~~~~~~~~~  385 (408)
                      ..++.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+...  ++..+- ..+.+++.+.+..+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGAT-VILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCc-EEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            457889999999 99999999999999996 88899987664332    3333221  221111 113456666555553


Q ss_pred             c-CCCCceEEEcccch
Q psy1413         386 Q-GEQPDKTIDCSGIE  400 (408)
Q Consensus       386 ~-~~~~d~i~d~~g~~  400 (408)
                      . ..++|.+|.++|..
T Consensus        88 ~~~~~id~vi~~Ag~~  103 (247)
T PRK08945         88 EQFGRLDGVLHNAGLL  103 (247)
T ss_pred             HHhCCCCEEEECCccc
Confidence            3 24799999998753

>PRK09135 pteridine reductase; Provisional

Probab=96.87  E-value=0.0099  Score=53.76  Aligned_cols=83  Identities=17%  Similarity=0.128  Sum_probs=55.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHHHH----HHc-CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLKTA----KEM-GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~~~----~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+. ++.+.+    .+. +....+..-|..+.+++.+.++++.. .
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYR-VAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4578999999 99999999999999997 77777753 333332    222 22233333444556666666665422 2


Q ss_pred             CCCceEEEcccc
Q psy1413         388 EQPDKTIDCSGI  399 (408)
Q Consensus       388 ~~~d~i~d~~g~  399 (408)
                      .++|.+|+++|.
T Consensus        84 ~~~d~vi~~ag~   95 (249)
T PRK09135         84 GRLDALVNNASS   95 (249)
T ss_pred             CCCCEEEECCCC
Confidence            468999999985

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.011  Score=53.84  Aligned_cols=83  Identities=24%  Similarity=0.199  Sum_probs=53.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe-cChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc---
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITD-ILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ---  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~-~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~---  386 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++.. ++.++.+.    +++.+........|..+.+++.+.+.++..   
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            3678999999 99999999999999998 66553 44444432    223343333222333344555555544331   


Q ss_pred             ----CCCCceEEEcccc
Q psy1413         387 ----GEQPDKTIDCSGI  399 (408)
Q Consensus       387 ----~~~~d~i~d~~g~  399 (408)
                          ..++|++++++|.
T Consensus        82 ~~~g~~~id~lv~~Ag~   98 (252)
T PRK12747         82 NRTGSTKFDILINNAGI   98 (252)
T ss_pred             hhcCCCCCCEEEECCCc
Confidence                2379999999985

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=96.82  E-value=0.012  Score=49.87  Aligned_cols=82  Identities=20%  Similarity=0.230  Sum_probs=56.3

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH-------HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL-------KTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-------~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+++|+|+ |++|..+++.+...|...|++++|+..+.       +.+++.+....+-..|..+.+++++.+.+... ..
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            36889999 99999999999999987788887765432       23334454433333444456677776666533 34


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      .+|.++++.|.
T Consensus        81 ~id~li~~ag~   91 (180)
T smart00822       81 PLRGVIHAAGV   91 (180)
T ss_pred             CeeEEEEcccc
Confidence            68999999984

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.01  Score=54.25  Aligned_cols=82  Identities=22%  Similarity=0.237  Sum_probs=55.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC----hhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDIL----EHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~----~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      +.++||+|+ |++|..+++.+...|++ ++++.++    .++.+    .++..+....+-.-|..+.+++++.+.++.. 
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~-vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAK-AVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCc-EEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            578999999 99999999999999998 4444332    22222    2233454433333445566777777777643 


Q ss_pred             CCCCceEEEcccc
Q psy1413         387 GEQPDKTIDCSGI  399 (408)
Q Consensus       387 ~~~~d~i~d~~g~  399 (408)
                      .+++|++|++.|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence            2479999999986

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.80  E-value=0.012  Score=53.50  Aligned_cols=82  Identities=20%  Similarity=0.243  Sum_probs=53.6

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhH----HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKL----KTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~----~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      +.++||+|+ |++|..+++.+...|++ +++..+ +..+.    +.+++.+....+...|..+.+++.+.+.++.. ..+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSL-VVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            578999999 99999999999999998 555443 33332    22334444433333344445666665555432 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|.+|++.|.
T Consensus        85 ~d~vi~~ag~   94 (252)
T PRK06077         85 ADILVNNAGL   94 (252)
T ss_pred             CCEEEECCCC
Confidence            9999999985

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.79  E-value=0.007  Score=55.54  Aligned_cols=83  Identities=23%  Similarity=0.263  Sum_probs=57.7

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecC---hhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDIL---EHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~---~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+   +++|+.+++.+...|++ |+++++.   .++++.+ ++++.... ..-|..+.+++++.+..+.. .
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGSDLV-FPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHHHHHHHHHhcCCcce-eeccCCCHHHHHHHHHHHHHHh
Confidence            4678999993   69999999999999998 7766543   3444433 34453322 23455566778877777654 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      +++|+++++.|..
T Consensus        83 g~iD~lvnnAG~~   95 (260)
T PRK06997         83 DGLDGLVHSIGFA   95 (260)
T ss_pred             CCCcEEEEccccC
Confidence            5799999999864

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.78  E-value=0.0079  Score=63.01  Aligned_cols=82  Identities=23%  Similarity=0.300  Sum_probs=61.2

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      +.+++|+|+ |++|..+++.+...|++ |++++|++++++.+    ++.+....+-..|..+.+++++.+.++.. -.++
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGAT-VFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999 99999999999999996 99999988776544    22344443334455667777777776543 2369


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |++|++.|.
T Consensus       450 d~li~~Ag~  458 (657)
T PRK07201        450 DYLVNNAGR  458 (657)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.78  E-value=0.011  Score=54.66  Aligned_cols=84  Identities=20%  Similarity=0.162  Sum_probs=59.7

Q ss_pred             CCCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecCh---hhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         315 TLGSKVLITGA---GPIGLVTLLTARALGASRVVITDILE---HKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       315 ~~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~---~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      -.++++||+|+   +++|+.+++.+...|++ |+++.|++   ++.+.+ ++++.... ...|..+.+++++.+.++.. 
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~-V~l~~r~~~~~~~~~~l~~~~~~~~~-~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAE-LAFTYQGDALKKRVEPLAAELGAFVA-GHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCchHHHHHHHHHHHhcCCceE-EecCCCCHHHHHHHHHHHHHh
Confidence            35678999987   58999999999999997 77777763   333333 34553222 33455667888888877654 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      ..++|+++++.|..
T Consensus        86 ~g~iD~lv~nAG~~   99 (272)
T PRK08159         86 WGKLDFVVHAIGFS   99 (272)
T ss_pred             cCCCcEEEECCccc
Confidence            34799999999864

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.77  E-value=0.0078  Score=55.98  Aligned_cols=69  Identities=26%  Similarity=0.339  Sum_probs=50.5

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      .+++++|+|.|.+|+.+++.++.+|++ |.+.+|+.++.+.+.++|...+ ..      +++.+.+      +..|+||+
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~~-V~v~~R~~~~~~~~~~~g~~~~-~~------~~l~~~l------~~aDiVin  215 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGAR-VFVGARSSADLARITEMGLIPF-PL------NKLEEKV------AEIDIVIN  215 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHCCCeee-cH------HHHHHHh------ccCCEEEE
Confidence            467999999999999999999999985 9999999887776666664322 11      2332222      35788888


Q ss_pred             ccc
Q psy1413         396 CSG  398 (408)
Q Consensus       396 ~~g  398 (408)
                      +++
T Consensus       216 t~P  218 (287)
T TIGR02853       216 TIP  218 (287)
T ss_pred             CCC
Confidence            775

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.75  E-value=0.013  Score=53.49  Aligned_cols=82  Identities=15%  Similarity=0.107  Sum_probs=56.1

Q ss_pred             CCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecC-----------hh-hH---HHHHHcCCCeEEecCCCCChHHHH
Q psy1413         317 GSKVLITGA-G--PIGLVTLLTARALGASRVVITDIL-----------EH-KL---KTAKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       317 ~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~-----------~~-~~---~~~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                      ++++||+|+ |  ++|..+++.+...|++ |++++|+           +. ..   +.+++.+........|..+.++++
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~G~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   83 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAKGID-IFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN   83 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHcCCc-EEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            478999998 4  7999999999999996 8888776           21 11   122334544333344555667777


Q ss_pred             HHHHHHhc-CCCCceEEEcccc
Q psy1413         379 THIIELLQ-GEQPDKTIDCSGI  399 (408)
Q Consensus       379 ~~~~~~~~-~~~~d~i~d~~g~  399 (408)
                      +.+.++.. ..++|++|++.|.
T Consensus        84 ~~~~~~~~~~g~id~vi~~ag~  105 (256)
T PRK12748         84 RVFYAVSERLGDPSILINNAAY  105 (256)
T ss_pred             HHHHHHHHhCCCCCEEEECCCc
Confidence            77766643 2479999999885

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.74  E-value=0.013  Score=53.52  Aligned_cols=84  Identities=11%  Similarity=0.084  Sum_probs=57.4

Q ss_pred             CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecC-----------hhhH----HHHHHcCCCeEEecCCCCChHHH
Q psy1413         316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDIL-----------EHKL----KTAKEMGADATVLIDRNHSLEEI  377 (408)
Q Consensus       316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~-----------~~~~----~~~~~~ga~~~i~~~~~~~~~~~  377 (408)
                      .++++||+|+ +  ++|..+++.+...|++ |+++.++           .+++    +.+++.|.......-|..+.+++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~-vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGAD-IFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCe-EEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            4678999998 4  8999999999999998 6665321           1111    22344565544434455667788


Q ss_pred             HHHHHHHhc-CCCCceEEEcccch
Q psy1413         378 STHIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       378 ~~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      .+.+.++.. ...+|++|+++|..
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~~  107 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAYS  107 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCC
Confidence            888777653 24689999999853

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=96.70  E-value=0.01  Score=53.34  Aligned_cols=80  Identities=25%  Similarity=0.262  Sum_probs=54.4

Q ss_pred             EEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         320 VLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       320 ~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      +||+|+ |++|..+++.+...|++ |++++|+. ++.+    .+++.|....+-..|..+.+++.+.+.++.. ..++|.
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAK-VIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            478898 99999999999999997 77777764 3322    2344454433344455556666666655432 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ++++.|..
T Consensus        80 vi~~ag~~   87 (239)
T TIGR01830        80 LVNNAGIT   87 (239)
T ss_pred             EEECCCCC
Confidence            99999853

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.011  Score=52.99  Aligned_cols=75  Identities=21%  Similarity=0.206  Sum_probs=54.1

Q ss_pred             EEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-Hc--CCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         321 LITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EM--GADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       321 lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~--ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ||+|+ |++|..+++.+...|++ |++++|+.++.+.+. ++  +....+...|..+.+++++.+.++   +++|.+|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGAR-VTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA---GPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc---CCCCEEEEC
Confidence            58898 99999999999999997 888999877665432 22  333323334545567777776653   469999999


Q ss_pred             ccc
Q psy1413         397 SGI  399 (408)
Q Consensus       397 ~g~  399 (408)
                      .|.
T Consensus        77 ag~   79 (230)
T PRK07041         77 AAD   79 (230)
T ss_pred             CCC
Confidence            885

>PLN02494 adenosylhomocysteinase

Probab=96.65  E-value=0.0068  Score=59.46  Aligned_cols=72  Identities=22%  Similarity=0.269  Sum_probs=55.6

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      -.+++++|+|.|.+|+.+++.++.+|++ |+++++++.+...+...|...+ +         +.+.+      +..|++|
T Consensus       252 LaGKtVvViGyG~IGr~vA~~aka~Ga~-VIV~e~dp~r~~eA~~~G~~vv-~---------leEal------~~ADVVI  314 (477)
T PLN02494        252 IAGKVAVICGYGDVGKGCAAAMKAAGAR-VIVTEIDPICALQALMEGYQVL-T---------LEDVV------SEADIFV  314 (477)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCchhhHHHHhcCCeec-c---------HHHHH------hhCCEEE
Confidence            5689999999999999999999999996 8989888887766766776522 1         22222      2479999


Q ss_pred             Ecccchhhh
Q psy1413         395 DCSGIESTI  403 (408)
Q Consensus       395 d~~g~~~~~  403 (408)
                      +++|..+.+
T Consensus       315 ~tTGt~~vI  323 (477)
T PLN02494        315 TTTGNKDII  323 (477)
T ss_pred             ECCCCccch
Confidence            999877654

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.01  Score=53.94  Aligned_cols=74  Identities=26%  Similarity=0.259  Sum_probs=48.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      +.+++|+|+ |++|..+++.+...|++ |++++|+. ++.+.... +....+. .|..+.+++.+    ..  +++|++|
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~~-Vi~~~r~~~~~~~~~~~-~~~~~~~-~D~~~~~~~~~----~~--~~iDilV   84 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGAK-VIGLTHSKINNSESNDE-SPNEWIK-WECGKEESLDK----QL--ASLDVLI   84 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEECCchhhhhhhcc-CCCeEEE-eeCCCHHHHHH----hc--CCCCEEE
Confidence            578999999 99999999999999997 88888876 33222221 2222222 22223344332    22  3699999


Q ss_pred             Ecccc
Q psy1413         395 DCSGI  399 (408)
Q Consensus       395 d~~g~  399 (408)
                      +++|.
T Consensus        85 nnAG~   89 (245)
T PRK12367         85 LNHGI   89 (245)
T ss_pred             ECCcc
Confidence            99986

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.60  E-value=0.0097  Score=55.50  Aligned_cols=77  Identities=17%  Similarity=0.281  Sum_probs=49.0

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh---hhHHHH-HHcC---CCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILE---HKLKTA-KEMG---ADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~---~~~~~~-~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      .+.+++|+|+||.|++++..+...|+++|.+++|+.   ++.+.+ +++.   ....+...+..+.+++.+.+      .
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~------~  198 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI------A  198 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh------c
Confidence            457899999999999999999999999899999985   454433 3332   12122211211112222222      2


Q ss_pred             CCceEEEccc
Q psy1413         389 QPDKTIDCSG  398 (408)
Q Consensus       389 ~~d~i~d~~g  398 (408)
                      .+|+++||+.
T Consensus       199 ~~DilINaTp  208 (289)
T PRK12548        199 SSDILVNATL  208 (289)
T ss_pred             cCCEEEEeCC
Confidence            4699999885

>KOG1200|consensus

Probab=96.59  E-value=0.017  Score=49.23  Aligned_cols=83  Identities=20%  Similarity=0.320  Sum_probs=58.4

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHHHHHHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLKTAKEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~~~~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      ....+|+|+ .++|++++|.+...|+| +++.+.+.. ..+.++.+|.  ++.--..|.+..++....+.+... ...++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Gar-v~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGAR-VAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcE-EEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            345778888 99999999999999999 777776544 4455677775  444333444455666665666543 34789


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +++||.|..
T Consensus        93 vlVncAGIt  101 (256)
T KOG1200|consen   93 VLVNCAGIT  101 (256)
T ss_pred             EEEEcCccc
Confidence            999999964

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.57  E-value=0.02  Score=54.88  Aligned_cols=84  Identities=24%  Similarity=0.082  Sum_probs=57.8

Q ss_pred             CCCCEEEEEec-chhHHH--HHHHHHHhCCCeEEEEecCh--hh--------------HHHHHHcCCCeEEecCCCCChH
Q psy1413         315 TLGSKVLITGA-GPIGLV--TLLTARALGASRVVITDILE--HK--------------LKTAKEMGADATVLIDRNHSLE  375 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~--~~~~~~~~Ga~~vv~~~~~~--~~--------------~~~~~~~ga~~~i~~~~~~~~~  375 (408)
                      .-++++||+|+ +++|++  +++.+ ..|++ ++++++..  .+              .+.+++.|.....-..|..+.+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            44579999999 999999  67777 88998 66665321  11              2344556755443345556667


Q ss_pred             HHHHHHHHHhc-CCCCceEEEcccch
Q psy1413         376 EISTHIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       376 ~~~~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +..+.+.++.. .+++|+++++.+.+
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC
Confidence            77777777654 35799999999866

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=96.56  E-value=0.019  Score=51.78  Aligned_cols=82  Identities=20%  Similarity=0.127  Sum_probs=55.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hH-HHHHHc---CCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KL-KTAKEM---GADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~-~~~~~~---ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      +++||+|+ |++|+.+++.+...|++ |++++|+.. .. +..++.   +....+...|..+.+++.+.+.++.. ..++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYR-VIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999 99999999999999986 888887743 12 222222   22333334455556677776666543 3469


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |.+|+++|..
T Consensus        82 d~vi~~ag~~   91 (245)
T PRK12824         82 DILVNNAGIT   91 (245)
T ss_pred             CEEEECCCCC
Confidence            9999999854

>KOG1207|consensus

Probab=96.55  E-value=0.0087  Score=50.02  Aligned_cols=82  Identities=23%  Similarity=0.223  Sum_probs=61.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .+..++++|+ -|+|+..++-+...||+ ||+++|++..+..+-+.-...++.-.-  +.++++...+.+..-..+|..+
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~-ViAvaR~~a~L~sLV~e~p~~I~Pi~~--Dls~wea~~~~l~~v~pidgLV   82 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQ-VIAVARNEANLLSLVKETPSLIIPIVG--DLSAWEALFKLLVPVFPIDGLV   82 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCE-EEEEecCHHHHHHHHhhCCcceeeeEe--cccHHHHHHHhhcccCchhhhh
Confidence            4567888998 89999999999999998 999999999988775544444433322  2356666666665555789999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      |..|..
T Consensus        83 NNAgvA   88 (245)
T KOG1207|consen   83 NNAGVA   88 (245)
T ss_pred             ccchhh
Confidence            988865

>PRK07069 short chain dehydrogenase; Validated

Probab=96.55  E-value=0.015  Score=52.73  Aligned_cols=80  Identities=20%  Similarity=0.263  Sum_probs=54.2

Q ss_pred             EEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHHHHH-Hc----CCCeEE-ecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         320 VLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLKTAK-EM----GADATV-LIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       320 ~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~~~~-~~----ga~~~i-~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      ++|+|+ |++|..+++.+...|++ |++++++ .++++.+. ++    +...+. -..|..+.+++.+.+.++.. -.++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAK-VFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            789998 99999999999999997 8888887 55554432 22    222221 12244456777776666533 3469


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|+++|..
T Consensus        81 d~vi~~ag~~   90 (251)
T PRK07069         81 SVLVNNAGVG   90 (251)
T ss_pred             cEEEECCCcC
Confidence            9999999854

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.53  E-value=0.017  Score=56.39  Aligned_cols=77  Identities=26%  Similarity=0.249  Sum_probs=50.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCC-eEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGAD-ATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~-~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .+++++|+|+ |++|..+++.+...|++ |++++|++++++.. .+.+.. ..+. -|..+.+++.+.    .  +++|+
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~-Vi~l~r~~~~l~~~~~~~~~~v~~v~-~Dvsd~~~v~~~----l--~~IDi  248 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAK-VVALTSNSDKITLEINGEDLPVKTLH-WQVGQEAALAEL----L--EKVDI  248 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhhcCCCeEEEE-eeCCCHHHHHHH----h--CCCCE
Confidence            3678999999 99999999999999997 88888887665432 222211 1222 222233433332    2  36999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|++.|..
T Consensus       249 LInnAGi~  256 (406)
T PRK07424        249 LIINHGIN  256 (406)
T ss_pred             EEECCCcC
Confidence            99998854

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.49  E-value=0.027  Score=49.56  Aligned_cols=35  Identities=40%  Similarity=0.485  Sum_probs=31.6

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .+.+++|+|.|++|..+++.+...|..++.+++.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            34679999999999999999999999999999865

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.48  E-value=0.01  Score=55.06  Aligned_cols=77  Identities=12%  Similarity=0.141  Sum_probs=52.7

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCe-EEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADA-TVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~-~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .+.+++|+|+|+.+++++..+..+|+++|.++.|+.+|.+.+ ++++... +....   ..+++    .+.  -..+|+|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~~~~----~~~--~~~~DiV  194 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GDSGG----LAI--EKAAEVL  194 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---chhhh----hhc--ccCCCEE
Confidence            467899999999999999999999999999999998887665 4343211 11110   00111    111  1368999


Q ss_pred             EEcccchh
Q psy1413         394 IDCSGIES  401 (408)
Q Consensus       394 ~d~~g~~~  401 (408)
                      |+|++...
T Consensus       195 InaTp~g~  202 (282)
T TIGR01809       195 VSTVPADV  202 (282)
T ss_pred             EECCCCCC
Confidence            99987643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=96.47  E-value=0.021  Score=52.13  Aligned_cols=80  Identities=19%  Similarity=0.160  Sum_probs=52.6

Q ss_pred             EEEEEec-chhHHHHHHHHHH----hCCCeEEEEecChhhHHHHH-Hc-----CCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         319 KVLITGA-GPIGLVTLLTARA----LGASRVVITDILEHKLKTAK-EM-----GADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~----~Ga~~vv~~~~~~~~~~~~~-~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      ++||+|+ +++|..+++.+..    .|++ |++++|+.++++.+. ++     +....+-.-|..+.+++++.+.++...
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSV-LVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcE-EEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            5789999 9999999987764    6876 888999887765542 22     222222233445567777766665432


Q ss_pred             C-----CCceEEEcccc
Q psy1413         388 E-----QPDKTIDCSGI  399 (408)
Q Consensus       388 ~-----~~d~i~d~~g~  399 (408)
                      .     +.|++|++.|.
T Consensus        81 ~g~~~~~~~~lv~nAG~   97 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGT   97 (256)
T ss_pred             cccCCCceEEEEeCCcc
Confidence            1     23689999885

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.44  E-value=0.019  Score=67.90  Aligned_cols=87  Identities=16%  Similarity=0.140  Sum_probs=64.3

Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHh-CCCeEEEEecChh--------------------------------------
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARAL-GASRVVITDILEH--------------------------------------  352 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~-Ga~~vv~~~~~~~--------------------------------------  352 (408)
                      .++++++|||+|| +|+|..+++.+... |++ +++++|+..                                      
T Consensus      1993 ~l~~g~vvLVTGGarGIG~aiA~~LA~~~ga~-viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813      1993 ALNSDDVFLVTGGAKGVTFECALELAKQCQAH-FILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHhcCCE-EEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence            5778899999999 99999999988876 565 999998710                                      


Q ss_pred             -------------hHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         353 -------------KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       353 -------------~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                                   .++.+++.|....+..-|..+.+++++.+.++....++|.+|++.|..
T Consensus      2072 ~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~ 2132 (2582)
T TIGR02813      2072 LVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVL 2132 (2582)
T ss_pred             cccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccC
Confidence                         012234457665555566677788888888775444799999999964

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.43  E-value=0.023  Score=55.49  Aligned_cols=82  Identities=23%  Similarity=0.334  Sum_probs=55.1

Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHH-------HHHHc-CCCeEEecCCCCChHHHHHHHHH
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLK-------TAKEM-GADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-------~~~~~-ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      ....+.++||+|+ |.+|..+++.+...|.+ |++++|+..+.+       ..+.. ++. ++ .-|..+.+++.+.++.
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~v~-~v-~~Dl~d~~~l~~~~~~  132 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYN-VVAVAREKSGIRGKNGKEDTKKELPGAE-VV-FGDVTDADSLRKVLFS  132 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEEechhhccccchhhHHhhhcCCce-EE-EeeCCCHHHHHHHHHH
Confidence            3455678999999 99999999999999987 888888765432       11112 222 22 2333345666666654


Q ss_pred             HhcCCCCceEEEcccc
Q psy1413         384 LLQGEQPDKTIDCSGI  399 (408)
Q Consensus       384 ~~~~~~~d~i~d~~g~  399 (408)
                      .  +.++|+||+|.+.
T Consensus       133 ~--~~~~D~Vi~~aa~  146 (390)
T PLN02657        133 E--GDPVDVVVSCLAS  146 (390)
T ss_pred             h--CCCCcEEEECCcc
Confidence            3  2279999999875

>PRK04148 hypothetical protein; Provisional

Probab=96.41  E-value=0.035  Score=44.97  Aligned_cols=83  Identities=23%  Similarity=0.263  Sum_probs=63.9

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeE------------------EecCCCCChHHH
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT------------------VLIDRNHSLEEI  377 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~------------------i~~~~~~~~~~~  377 (408)
                      .+.+++++|.| .|..+++.++.+|.+ |++++.+++..+.+++.+.+.+                  ..-+-   +.++
T Consensus        16 ~~~kileIG~G-fG~~vA~~L~~~G~~-ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirp---p~el   90 (134)
T PRK04148         16 KNKKIVELGIG-FYFKVAKKLKESGFD-VIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRP---PRDL   90 (134)
T ss_pred             cCCEEEEEEec-CCHHHHHHHHHCCCE-EEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCC---CHHH
Confidence            45789999999 998888888889987 9999999998887777654333                  33222   3577


Q ss_pred             HHHHHHHhcCCCCceEEEcccchhhh
Q psy1413         378 STHIIELLQGEQPDKTIDCSGIESTI  403 (408)
Q Consensus       378 ~~~~~~~~~~~~~d~i~d~~g~~~~~  403 (408)
                      ..-+.++...-++|++|-.-+++.+.
T Consensus        91 ~~~~~~la~~~~~~~~i~~l~~e~~~  116 (134)
T PRK04148         91 QPFILELAKKINVPLIIKPLSGEEPI  116 (134)
T ss_pred             HHHHHHHHHHcCCCEEEEcCCCCCCC
Confidence            77888877677899999888877653

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.38  E-value=0.016  Score=53.31  Aligned_cols=45  Identities=20%  Similarity=0.141  Sum_probs=39.0

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK  358 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~  358 (408)
                      +..+.+++|.|+||.+++++..+...|+.+|.++.|+.+|.+.+.
T Consensus       119 ~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la  163 (272)
T PRK12550        119 VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALA  163 (272)
T ss_pred             CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            344568999999999999999999999999999999998877653

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.34  E-value=0.021  Score=52.49  Aligned_cols=81  Identities=16%  Similarity=0.104  Sum_probs=49.6

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH-HHc----CCCeEEecCCCCChHHH----HHHHHHHhc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA-KEM----GADATVLIDRNHSLEEI----STHIIELLQ  386 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~-~~~----ga~~~i~~~~~~~~~~~----~~~~~~~~~  386 (408)
                      .+++|+|+ +++|+.+++.+...|++ |+++.+ +.++++.+ +++    +....+-.-|..+.+.+    ++.+.....
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYR-VVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCe-EEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            47899999 99999999999999998 666654 44444332 222    22222222333344433    333333221


Q ss_pred             -CCCCceEEEcccc
Q psy1413         387 -GEQPDKTIDCSGI  399 (408)
Q Consensus       387 -~~~~d~i~d~~g~  399 (408)
                       ..++|++|+++|.
T Consensus        81 ~~g~iD~lv~nAG~   94 (267)
T TIGR02685        81 AFGRCDVLVNNASA   94 (267)
T ss_pred             ccCCceEEEECCcc
Confidence             2479999999985

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PLN00015 protochlorophyllide reductase

Probab=96.31  E-value=0.023  Score=53.55  Aligned_cols=79  Identities=25%  Similarity=0.236  Sum_probs=55.4

Q ss_pred             EEEec-chhHHHHHHHHHHhC-CCeEEEEecChhhHHHH-HHcC---CCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         321 LITGA-GPIGLVTLLTARALG-ASRVVITDILEHKLKTA-KEMG---ADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       321 lv~G~-G~~G~~~~~~~~~~G-a~~vv~~~~~~~~~~~~-~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      ||+|+ +++|..+++.+...| ++ |++++|+.++.+.+ ++++   ....+-.-|..+.+++++.+.++.. ..++|++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWH-VVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            58899 999999999999999 65 88888987776543 3332   2222223344556777777776643 3479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus        80 InnAG~~   86 (308)
T PLN00015         80 VCNAAVY   86 (308)
T ss_pred             EECCCcC
Confidence            9999863

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.30  E-value=0.028  Score=50.58  Aligned_cols=79  Identities=19%  Similarity=0.113  Sum_probs=52.9

Q ss_pred             EEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         320 VLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       320 ~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      +||+|+ |++|..+++.+...|++ +++++++ .++.+.    +++.+....+-.-|..+.+++.+.+.+... ...+|.
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFE-ICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            588998 99999999999999998 7666654 333332    233444333333444556777777666432 346899


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      ++++.|.
T Consensus        80 li~~ag~   86 (239)
T TIGR01831        80 VVLNAGI   86 (239)
T ss_pred             EEECCCC
Confidence            9998885

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.30  E-value=0.02  Score=55.30  Aligned_cols=74  Identities=24%  Similarity=0.392  Sum_probs=58.6

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHH-HHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLK-TAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .+.++||+|+|-+|..+++++...|.+.|++..|+-+|.+ .++++|+..+ ..      +++.+.+      ..+|+||
T Consensus       177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l------~el~~~l------~~~DvVi  243 (414)
T COG0373         177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-AL------EELLEAL------AEADVVI  243 (414)
T ss_pred             ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cH------HHHHHhh------hhCCEEE
Confidence            6788999999999999999999999999999999988875 4588984433 22      3343333      3589999


Q ss_pred             Ecccchhh
Q psy1413         395 DCSGIEST  402 (408)
Q Consensus       395 d~~g~~~~  402 (408)
                      -++|.++.
T Consensus       244 ssTsa~~~  251 (414)
T COG0373         244 SSTSAPHP  251 (414)
T ss_pred             EecCCCcc
Confidence            99998765

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.29  E-value=0.014  Score=54.18  Aligned_cols=74  Identities=22%  Similarity=0.261  Sum_probs=50.8

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .+.+++|+|+|+.|.+++..+..+|+.+|.+++|+.++.+.+. +++....+.. +    .+.    .+.  -..+|+||
T Consensus       122 ~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~----~~~----~~~--~~~~DivI  190 (278)
T PRK00258        122 KGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D----LEL----QEE--LADFDLII  190 (278)
T ss_pred             CCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c----ccc----hhc--cccCCEEE
Confidence            4568999999999999999999999777999999988876653 3432110111 1    001    111  24689999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      +|++..
T Consensus       191 naTp~g  196 (278)
T PRK00258        191 NATSAG  196 (278)
T ss_pred             ECCcCC
Confidence            998743

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.29  E-value=0.026  Score=52.41  Aligned_cols=42  Identities=24%  Similarity=0.271  Sum_probs=37.4

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA  357 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~  357 (408)
                      .+.+++|+|+|+.|.+++..+...|+++|.+++|+.+|.+.+
T Consensus       126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l  167 (284)
T PRK12549        126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL  167 (284)
T ss_pred             cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            347899999999999999999999998899999998887655

>PRK08223 hypothetical protein; Validated

Probab=96.25  E-value=0.026  Score=52.00  Aligned_cols=35  Identities=37%  Similarity=0.532  Sum_probs=31.3

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ...+|+|+|+||+|..+++.+.+.|..++.++|.+
T Consensus        26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            34779999999999999999999999999998754

>PRK06924 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.032  Score=50.58  Aligned_cols=82  Identities=20%  Similarity=0.236  Sum_probs=53.2

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcC---CCC-
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQG---EQP-  390 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~---~~~-  390 (408)
                      +++||+|+ |++|..+++.+...|++ |++++|++ ++++.+ ++.+....+-..|..+.+++++.+++....   ... 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTH-VISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCE-EEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            46899999 99999999999999996 88888876 444433 223433322234445567777766665321   122 


Q ss_pred             -ceEEEcccch
Q psy1413         391 -DKTIDCSGIE  400 (408)
Q Consensus       391 -d~i~d~~g~~  400 (408)
                       ++++++.|..
T Consensus        81 ~~~~v~~ag~~   91 (251)
T PRK06924         81 SIHLINNAGMV   91 (251)
T ss_pred             ceEEEEcceec
Confidence             2677877753

>KOG1208|consensus

Probab=96.21  E-value=0.046  Score=51.39  Aligned_cols=86  Identities=27%  Similarity=0.271  Sum_probs=60.4

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-c----C-CCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-M----G-ADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~----g-a~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      -.+.+++|+|+ .|+|...++-+..+|++ |+...|+.++.+.+++ .    . ....+-.-|.++.+.+++...+... 
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~-Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAH-VVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            34478999999 99999999999999976 8889999876654422 2    2 2222234445556666666665532 


Q ss_pred             CCCCceEEEcccchh
Q psy1413         387 GEQPDKTIDCSGIES  401 (408)
Q Consensus       387 ~~~~d~i~d~~g~~~  401 (408)
                      ..+.|+.++++|.-.
T Consensus       112 ~~~ldvLInNAGV~~  126 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMA  126 (314)
T ss_pred             CCCccEEEeCccccc
Confidence            457899999998643

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.21  E-value=0.043  Score=49.63  Aligned_cols=34  Identities=29%  Similarity=0.413  Sum_probs=30.8

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      +.+++|+|+|++|..+++.+.+.|..++.++|.+
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3679999999999999999999999999998764

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.18  E-value=0.032  Score=45.62  Aligned_cols=34  Identities=26%  Similarity=0.384  Sum_probs=30.4

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      +.+++|.|+|++|..++..+...|.+++.++|..
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence            4689999999999999999999999999999764

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.18  E-value=0.029  Score=53.87  Aligned_cols=79  Identities=20%  Similarity=0.154  Sum_probs=52.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC--CCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG--ADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      .+.++||+|+ |.+|..+++.+...|.+ |++++|+....... +.++  ....+...|..+.+++.+.+++    .++|
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~d   77 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAE-VYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAE----FKPE   77 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCE-EEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhh----cCCC
Confidence            3578999999 99999999999999987 88888776543221 2222  1222222333445555555554    2589


Q ss_pred             eEEEcccc
Q psy1413         392 KTIDCSGI  399 (408)
Q Consensus       392 ~i~d~~g~  399 (408)
                      .||++++.
T Consensus        78 ~vih~A~~   85 (349)
T TIGR02622        78 IVFHLAAQ   85 (349)
T ss_pred             EEEECCcc
Confidence            99999984

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.16  E-value=0.035  Score=48.45  Aligned_cols=77  Identities=17%  Similarity=0.242  Sum_probs=51.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-c----CCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-M----GADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~----ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      .+.+++|.|+ |++|+.+++.+...|++ |++++|+.++.+.+.+ +    +....  ..+..+.++..+.+      ++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~-V~l~~R~~~~~~~l~~~l~~~~~~~~~--~~~~~~~~~~~~~~------~~   97 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGAR-VVLVGRDLERAQKAADSLRARFGEGVG--AVETSDDAARAAAI------KG   97 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhhcCCcEE--EeeCCCHHHHHHHH------hc
Confidence            4578999998 99999999999888975 8888999887665432 2    32211  11111234443333      36


Q ss_pred             CceEEEcccchh
Q psy1413         390 PDKTIDCSGIES  401 (408)
Q Consensus       390 ~d~i~d~~g~~~  401 (408)
                      +|+||.+++...
T Consensus        98 ~diVi~at~~g~  109 (194)
T cd01078          98 ADVVFAAGAAGV  109 (194)
T ss_pred             CCEEEECCCCCc
Confidence            899999887544

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.15  E-value=0.03  Score=52.96  Aligned_cols=72  Identities=24%  Similarity=0.183  Sum_probs=50.1

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      +++|+|+ |-+|..+++.+...|.+ |.+++|+.++...+...+...+  ..|..+.+++.+.+      +++|+||+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~-V~~l~R~~~~~~~l~~~~v~~v--~~Dl~d~~~l~~al------~g~d~Vi~~~   72 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQ-VRCLVRNLRKASFLKEWGAELV--YGDLSLPETLPPSF------KGVTAIIDAS   72 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcChHHhhhHhhcCCEEE--ECCCCCHHHHHHHH------CCCCEEEECC
Confidence            6899999 99999999999999986 8888898776655555554432  22222334443333      3689999987


Q ss_pred             cc
Q psy1413         398 GI  399 (408)
Q Consensus       398 g~  399 (408)
                      +.
T Consensus        73 ~~   74 (317)
T CHL00194         73 TS   74 (317)
T ss_pred             CC
Confidence            63

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.13  E-value=0.028  Score=54.81  Aligned_cols=75  Identities=25%  Similarity=0.337  Sum_probs=47.8

Q ss_pred             EEEEecchhHHHHHHHHHHhCCC-eEEEEecChhhHHHHHH--cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         320 VLITGAGPIGLVTLLTARALGAS-RVVITDILEHKLKTAKE--MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~-~vv~~~~~~~~~~~~~~--~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ++|+|+|.+|..+++.+...+-. +|++.+|+.++++.+.+  .+.......-+..+.+++    .++.  ++.|+|+||
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l----~~~~--~~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESL----AELL--RGCDVVINC   74 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHH----HHHH--TTSSEEEE-
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHH----HHHH--hcCCEEEEC
Confidence            57889999999999999987654 79999999999877654  332222222222223333    3333  356999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +|..
T Consensus        75 ~gp~   78 (386)
T PF03435_consen   75 AGPF   78 (386)
T ss_dssp             SSGG
T ss_pred             Cccc
Confidence            9865

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1611|consensus

Probab=96.12  E-value=0.014  Score=51.07  Aligned_cols=86  Identities=17%  Similarity=0.202  Sum_probs=62.4

Q ss_pred             CEEEEEec-chhHHHHHH-HHHHhCCCeEEEEecChhh-HHHHHHcC----CCeE--EecCCCCChHHHHHHHHHHhcCC
Q psy1413         318 SKVLITGA-GPIGLVTLL-TARALGASRVVITDILEHK-LKTAKEMG----ADAT--VLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~-~~~~~Ga~~vv~~~~~~~~-~~~~~~~g----a~~~--i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      .+|+|+|+ -|+|+.+++ +++.-|.++++.+.|+.++ .++++...    --++  +|-..+.+..++.+++.++.+..
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            45999999 999999888 4556799988888887777 33333221    1222  44444456677888888888889


Q ss_pred             CCceEEEcccchhhh
Q psy1413         389 QPDKTIDCSGIESTI  403 (408)
Q Consensus       389 ~~d~i~d~~g~~~~~  403 (408)
                      |.|+.++++|....+
T Consensus        84 GlnlLinNaGi~~~y   98 (249)
T KOG1611|consen   84 GLNLLINNAGIALSY   98 (249)
T ss_pred             CceEEEeccceeeec
Confidence            999999999976554

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=96.10  E-value=0.047  Score=51.86  Aligned_cols=77  Identities=16%  Similarity=0.201  Sum_probs=50.6

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhC-CCeEEEEecChhhHHHH-HHcC-CCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALG-ASRVVITDILEHKLKTA-KEMG-ADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~G-a~~vv~~~~~~~~~~~~-~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      +.++||+|+ |.+|..+++.+...| ..+|++++|+..+.+.+ +.+. ....+...|..+.+++.+.+      +++|+
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~------~~iD~   77 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL------RGVDY   77 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH------hcCCE
Confidence            578999999 999999999988876 34588888876654433 2232 12222233434445544443      25899


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      +|+++|.
T Consensus        78 Vih~Ag~   84 (324)
T TIGR03589        78 VVHAAAL   84 (324)
T ss_pred             EEECccc
Confidence            9999885

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.10  E-value=0.048  Score=51.96  Aligned_cols=34  Identities=29%  Similarity=0.405  Sum_probs=31.2

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      +.+|+|+|+|++|..+++.+.++|..++.++|++
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D   57 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRD   57 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4679999999999999999999999999999875

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=96.09  E-value=0.033  Score=52.75  Aligned_cols=78  Identities=17%  Similarity=0.064  Sum_probs=50.0

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH---H-cCC--CeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK---E-MGA--DATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~---~-~ga--~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      +.+.++||+|+ |.+|..+++.+...|.+ |++++++..+.+...   . .+.  ...+...|..+.+++.+.+      
T Consensus         3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------   75 (325)
T PLN02989          3 DGGKVVCVTGASGYIASWIVKLLLFRGYT-INATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI------   75 (325)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCE-EEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH------
Confidence            45678999999 99999999999999997 777777655433221   1 121  1122222333334444443      


Q ss_pred             CCCceEEEcccc
Q psy1413         388 EQPDKTIDCSGI  399 (408)
Q Consensus       388 ~~~d~i~d~~g~  399 (408)
                      +++|++|+++|.
T Consensus        76 ~~~d~vih~A~~   87 (325)
T PLN02989         76 DGCETVFHTASP   87 (325)
T ss_pred             cCCCEEEEeCCC
Confidence            258999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	408
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		4e-58
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		4e-58
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		2e-55
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		1e-54
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		3e-38
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		6e-17
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		1e-16
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		5e-15
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		1e-14
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		1e-14
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		4e-14
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		3e-13
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		4e-12
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		6e-12
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		3e-10
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		2e-09
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		2e-09
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		3e-09
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		2e-08
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		2e-08
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		3e-08
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		3e-08
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		2e-07
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		2e-07
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		7e-07
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		2e-04
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		2e-06
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-06
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-04
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		3e-06
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		6e-05
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		4e-06
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		7e-06
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		1e-05
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		1e-05
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		1e-05
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		2e-05
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		2e-05
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		2e-05
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		3e-05
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		4e-04
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		3e-05
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		4e-04
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		3e-05
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		4e-04
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		3e-05
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		3e-05
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		4e-04
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		3e-05
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		4e-04
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		3e-05
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		3e-05
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		4e-04
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		3e-05
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		3e-04
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		3e-05
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-05
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-04
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		3e-05
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		3e-04
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		3e-05
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		4e-05
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-04
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		5e-05
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		5e-05
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		1e-04
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		5e-05
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		9e-05
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		5e-05
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		1e-04
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		1e-04
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		8e-04
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		1e-04
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		9e-04
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-04
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		1e-04
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		7e-04
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		2e-04
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		2e-04
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		2e-04
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		2e-04
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		5e-04
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		5e-04
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		5e-04
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		5e-04
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		5e-04
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		6e-04
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		6e-04

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score =  222 bits (565), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 115/208 (55%), Positives = 147/208 (70%), Gaps = 10/208 (4%)
Query: 206 NYLLEDTL---HAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIF 262
           +++++D +   H         G  +K +   DRVA+EPGVPCR C +CKEG+YNLC  + 
Sbjct: 55  DFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLT 114
Query: 263 FCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLI 322
           FCATPPD GNL+RYY HAADFCHKLPD+VSLEEGALLEPLSVGVHACRRAGV LG+ VL+
Sbjct: 115 FCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLV 174
Query: 323 TGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHII 382
            GAGPIGLV++L A+A GA  VV T     +L+ AK  GAD T+++D     +E  + II
Sbjct: 175 IGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVD---PAKEEESSII 230
Query: 383 ELLQ---GEQPDKTIDCSGIESTIKLGM 407
           E ++   G+ P+ TIDCSG E  I +G+
Sbjct: 231 ERIRSAIGDLPNVTIDCSGNEKCITIGI 258

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score =  222 bits (565), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 107/184 (58%), Positives = 144/184 (78%), Gaps = 2/184 (1%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G+ ++ +   DRVAI+PG P +T  +CK GRYNL   IFFCATPPD GNL R+Y+H A+F
Sbjct: 78  GSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANF 137
Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C+KLPD+V+ EEGAL+EPLSVG+HACRRAGVTLG+KVL+ GAGPIGLV LL A+A+GA++
Sbjct: 138 CYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQ 197
Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           VV+TD+   +L  AKE+GAD  + I  N S EEI+   +E L G +P+ TI+C+G+E++I
Sbjct: 198 VVVTDLSASRLSKAKEVGADFILEIS-NESPEEIAKK-VEGLLGSKPEVTIECTGVETSI 255
Query: 404 KLGM 407
           + G+
Sbjct: 256 QAGI 259

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score =  212 bits (540), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 104/184 (56%), Positives = 139/184 (75%), Gaps = 2/184 (1%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G+++K +   DRVAIEPG P     +CK GRYNL   IFFCATPPD GNL R+Y+H A F
Sbjct: 79  GSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF 138
Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C+KLPD+V+ EEGAL+EPLSVG+HACRR GVTLG KVL+ GAGPIG+VTLL A+A+GA++
Sbjct: 139 CYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQ 198
Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           VV+TD+   +L  AKE+GAD  + I +  S +EI+   +E   G +P+ TI+C+G E++I
Sbjct: 199 VVVTDLSATRLSKAKEIGADLVLQISK-ESPQEIARK-VEGQLGCKPEVTIECTGAEASI 256
Query: 404 KLGM 407
           + G+
Sbjct: 257 QAGI 260

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score =  210 bits (534), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 104/184 (56%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G+++K +   DRVAIEPG P     +CK GRYNL   IFFCATPPD GNL R+Y+H A F
Sbjct: 79  GSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF 138
Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
           C+KLPD+V+ EEGAL+EPLSVG+HACRR GVTLG KVL+ GAGPIG VTLL A+A GA++
Sbjct: 139 CYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGXVTLLVAKAXGAAQ 198
Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           VV+TD+   +L  AKE+GAD  + I +  S +EI+   +E   G +P+ TI+C+G E++I
Sbjct: 199 VVVTDLSATRLSKAKEIGADLVLQISK-ESPQEIARK-VEGQLGCKPEVTIECTGAEASI 256
Query: 404 KLGM 407
           + G+
Sbjct: 257 QAGI 260

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score =  155 bits (393), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/175 (48%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRVAIEP V C  C  C  GRYN C ++ F +TPP  G L RY  H A +CHK+  ++S 
Sbjct: 98  DRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GNMSY 156
Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           E GA+LEPLSV +   +RAGV LG  VLI GAGPIGL+T+L A+A GA  +VITDI E +
Sbjct: 157 ENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGR 216
Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML 408
           LK AKE+  +         S EE +  I+E   G +P   ++C+G+ES+I   + 
Sbjct: 217 LKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIW 271

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 3/191 (1%)
Query: 214 HAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNL 273
           H F      AG+A++ +    R+  +P + C  C  C+ GR NLCR +       D G  
Sbjct: 81  HEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRD-GGF 139
Query: 274 SRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTL 333
           + Y         ++P  +    GA  EPL+  +H    +G+  GS V I G G IGL+T+
Sbjct: 140 AEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTV 199
Query: 334 LTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT 393
             AR  GA+ V+++     K + A+E+GA ATV       +E I+  +  +  G   D  
Sbjct: 200 QLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGV--DVV 257
Query: 394 IDCSGIESTIK 404
           I+C+G+  T+K
Sbjct: 258 IECAGVAETVK 268

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 214 HAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNL 273
           H F       G+ +  +   D VA  P +PC TC  C +G Y+ C +  F  +  D G  
Sbjct: 59  HEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRD-GGF 117
Query: 274 SRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTL 333
           + Y          LP  + +E+GA +EP++VG+HA   A       V+I GAG IGL+ +
Sbjct: 118 AEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAI 177
Query: 334 LTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT 393
             A ALGA  V   DI   KL  AK  GA  T      +S E  +  +  +L+  + ++ 
Sbjct: 178 QCAVALGAKSVTAIDISSEKLALAKSFGAMQTF-----NSSEMSAPQMQSVLRELRFNQL 232
Query: 394 I-DCSGIESTIKLGM 407
           I + +G+  T++L +
Sbjct: 233 ILETAGVPQTVELAV 247

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 7/197 (3%)
Query: 212 TLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHG 271
           T H F       G  ++     D V++E  + C  C  C+ G Y++C          D G
Sbjct: 61  TGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRD-G 119
Query: 272 NLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLV 331
             + Y    A+     P  +  E  A+LEP    VH         G  VLITGAGPIGL+
Sbjct: 120 GFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLM 179
Query: 332 TLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391
             +  RA GA  ++++D   ++L  A+   AD  V     + LEE    ++  + G   +
Sbjct: 180 AAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLV-----NPLEEDLLEVVRRVTGSGVE 233
Query: 392 KTIDCSGIESTIKLGML 408
             ++ SG E+ I  G++
Sbjct: 234 VLLEFSGNEAAIHQGLM 250

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D V++E  + C  C  C+ G+Y++C+         D G  + Y    A    K P  +  
Sbjct: 86  DYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD-GVFAEYAVVPAQNIWKNPKSIPP 144
Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           E   L EPL   V     AG   G  VLITGAGP+GL+ +  A+A GA  V++++  + +
Sbjct: 145 EYATLQEPLGNAVDTVL-AGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFR 203
Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
            + AK++GAD  +    N   E++   + ++  G   D  ++ SG    ++ G+
Sbjct: 204 RELAKKVGADYVI----NPFEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGL 253

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D V++E  + C  C  C+ G+Y++C+         D G  + Y    A    K P  +  
Sbjct: 87  DYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD-GVFAEYAVVPAQNIWKNPKSIPP 145
Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           E   L EPL   V     AG   G  VLITGAGP+GL+ +  A+A GA  V++++  + +
Sbjct: 146 EYATLQEPLGNAVDTVL-AGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFR 204
Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
            + AK++GAD  +    N   E++   + ++  G   D  ++ SG    ++ G+
Sbjct: 205 RELAKKVGADYVI----NPFEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGL 254

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D +++E  + C  C  CK  RY++C+         D G  + Y    A    K P  +  
Sbjct: 87  DYISVETHIVCGKCYACKHNRYHVCQNTKIFGVDMD-GVFAHYAIVPAKNAWKNPKDMPP 145
Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           E  AL EPL   V     AG   G   LITGAGP+GL+ +  A+A GA  V++++  E +
Sbjct: 146 EYAALQEPLGNAVDTVL-AGPIAGRSTLITGAGPLGLLGIAVAKASGAYPVIVSEPSEFR 204
Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
            K AK++GAD  V    N   E+    ++++  G   +  ++ SG    ++ G+
Sbjct: 205 RKLAKKVGADYVV----NPFEEDPVKFVMDITDGAGVEVFLEFSGAPKALEQGL 254

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 214 HAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNL 273
           H F       G  ++     +RVA++P V C  C  C  G+ N+C  +       D G  
Sbjct: 79  HEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHAD-GGF 137
Query: 274 SRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTL 333
           S Y    A    K+P+ V+ +   ++EP ++  +       T    VL+ GAGPIGL  +
Sbjct: 138 SEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIV 197
Query: 334 LTARAL-GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK 392
              + +     V++ D ++ +L+ AKE GAD  +    N+S   +     E  +G +P  
Sbjct: 198 QVLKGVYNVKNVIVADRIDERLEKAKESGADWAI----NNSQTPLGESFAE--KGIKPTL 251
Query: 393 TIDCSGIESTIK 404
            ID +   S +K
Sbjct: 252 IIDAACHPSILK 263

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 234 DRVAIEPGV--PCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHV 291
           DRV I P +   C  C YC  G+  LC          D G  + Y R AAD+  K+PD++
Sbjct: 81  DRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-GGYAEYCRAAADYVVKIPDNL 138
Query: 292 SLEEGALLEPLSVGVH-ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
           S EE A +    V  + A +  G   G  V I G G +G V +  A+A+G + VV  DI 
Sbjct: 139 SFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLN-VVAVDIG 197
Query: 351 EHKLKTAKEMGADATV 366
           + KL+ AKE+GAD  V
Sbjct: 198 DEKLELAKELGADLVV 213

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 234 DRVAIEPGV--PCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHV 291
           DRV I P +   C  C YC  G+  LC          D G  + Y R AAD+  K+PD++
Sbjct: 81  DRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-GGYAEYCRAAADYVVKIPDNL 138
Query: 292 SLEEGALLEPLSVGVH-ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
           S EE A +    V  + A +  G   G  V I G G  G V +  A+A+G + VV  DI 
Sbjct: 139 SFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGFGHVAVQYAKAMGLN-VVAVDIG 197
Query: 351 EHKLKTAKEMGADATV 366
           + KL+ AKE+GAD  V
Sbjct: 198 DEKLELAKELGADLVV 213

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 80/187 (42%), Gaps = 12/187 (6%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G  ++     D V I PG+ C  C  C  G  NLC +         HG  + Y       
Sbjct: 73  GPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEH-RHGTYAEYVVLPEAN 131
Query: 284 CHKLPDHVSLEEGAL--LEPLSVGVHACRRAGVTLGSKVLITGAGP-IGLVTLLTARALG 340
               P ++S EE A   L  L+       + GV  G  VL+  AG  + +  +  A+  G
Sbjct: 132 LAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFG 191
Query: 341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG-- 398
           A RV+ T   E KL+ AK +GAD TV    N++  +    +  L  G+  DK +D +G  
Sbjct: 192 A-RVIATAGSEDKLRRAKALGADETV----NYTHPDWPKEVRRLTGGKGADKVVDHTGAL 246
Query: 399 -IESTIK 404
             E  IK
Sbjct: 247 YFEGVIK 253

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 236 VAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEE 295
           V  E  + C  C  C EG  N C  +       D G  + Y +  A +   L +   + E
Sbjct: 125 VCAEEXLWCGHCRPCAEGFPNHCENLNELGFNVD-GAFAEYVKVDAKYAWSLRELEGVYE 183
Query: 296 G-------ALLEPLSVGVHAC--RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVI 346
           G       +L+EP SV  +A   R  G+  G  V+I G GPIGL  +   +  GAS+V++
Sbjct: 184 GDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVIL 243
Query: 347 TDILEHKLKTAKEMGADATVLIDRNHSLEEI 377
           ++  E +   AKE+GAD  +   + + +E +
Sbjct: 244 SEPSEVRRNLAKELGADHVIDPTKENFVEAV 274

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D V + P V   TC  C+ G    C  + F     D G  + + R +     KLP  +S 
Sbjct: 99  DPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNID-GGFAEFMRTSHRSVIKLPKDISR 157
Query: 294 EEGALLEPLS----VGVHACRRAGVTL--GSKVLITGAGPIGLVTLLTARALGASRVVIT 347
           E+   + PL+        A ++A  TL  G+ V I G G +G + +   + +  + V+  
Sbjct: 158 EKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIAL 217
Query: 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
           D+ E KLK A+ +GAD  V   R+         ++EL +G   +  +D  G ++T+
Sbjct: 218 DVKEEKLKLAERLGADHVVDARRDP-----VKQVMELTRGRGVNVAMDFVGSQATV 268

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLS 303
           C  C YC  G    CR++       D G ++      AD+  K+PD +   E + +    
Sbjct: 91  CGHCEYCVSGNETFCREVKNAGYSVD-GGMAEEAIVVADYAVKVPDGLDPIEASSITCAG 149
Query: 304 VGVH-ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGA 362
           V  + A + +GV  G   +I GAG +G + +  A+ +  ++V+  DI + KL  AK++GA
Sbjct: 150 VTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGA 209
Query: 363 DATVLIDRNHSLEEI 377
           D T+     + ++EI
Sbjct: 210 DVTINSGDVNPVDEI 224

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLS 303
           C  C YC  G    CR++       D G ++      AD+  K+PD +   E + +    
Sbjct: 91  CGHCEYCVSGNETFCREVKNAGYSVD-GGMAEEAIVVADYAVKVPDGLDPIEASSITCAG 149
Query: 304 VGVH-ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGA 362
           V  + A + +GV  G   +I GAG +G + +  A+ +  ++V+  DI + KL  AK++GA
Sbjct: 150 VTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGA 209
Query: 363 DATVLIDRNHSLEEI 377
           D  +     + ++EI
Sbjct: 210 DVIINSGDVNPVDEI 224

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 81/191 (42%), Gaps = 31/191 (16%)
Query: 244 CRTCTYCKEGRYNLCRQI-------------------FFCATPPDH-----GNLSRYYRH 279
           CR C +C     NLC +I                   F C   P +        S+Y   
Sbjct: 100 CRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVV 159
Query: 280 AADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTAR 337
           +     K+ D  +LE   LL    S G  A    A VT GS   + G G +GL  ++  +
Sbjct: 160 SDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCK 219
Query: 338 ALGASRVVITDILEHKLKTAKEMGA-DATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396
           A GASR++  DI   K   AK +GA D     D +  ++E+   IIEL +G   D  +DC
Sbjct: 220 AAGASRIIGIDINSEKFVKAKALGATDCLNPRDLHKPIQEV---IIELTKGGV-DFALDC 275
Query: 397 SGIESTIKLGM 407
           +G   T+K  +
Sbjct: 276 AGGSETMKAAL 286

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEE 376
           G  V+I GAGP+GL  ++ AR+LGA  V++     ++LK A+E+GAD T L  R  S+EE
Sbjct: 196 GKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLT-LNRRETSVEE 254
Query: 377 ISTHIIELLQGEQPDKTIDCSG 398
               I+++  G   D  ++ +G
Sbjct: 255 RRKAIMDITHGRGADFILEATG 276

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 76/181 (41%), Gaps = 20/181 (11%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLC-RQIFFCATPP---DHGNLSRYY-----RHAADFC 284
           D VA+     C  C  C  GR N C R      TPP     G+++ Y      RH     
Sbjct: 82  DAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIG 141
Query: 285 HKLPDHVSLEEGALLEPLSVGVHACRRAGVTLG--SKVLITGAGPIGLVTLLTARALGAS 342
              P   +    A L P     HA  R    LG  S  ++ G G +G V +   RA+ A+
Sbjct: 142 DLDPVAAAPLTDAGLTPY----HAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAA 197
Query: 343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402
           RV+  D+ + +L  A+E+GADA V      S    +  I EL  G+      D  G +ST
Sbjct: 198 RVIAVDLDDDRLALAREVGADAAV-----KSGAGAADAIRELTGGQGATAVFDFVGAQST 252
Query: 403 I 403
           I
Sbjct: 253 I 253

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D VA+ P      C YC+ G  +LC    +     D             + +KL    ++
Sbjct: 88  DLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYVLVPHYKYLYKLRRLSAV 147
Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH 352
           E   L         A R+A +     +++ GA G +G + +  A+A+  + ++  D+ E 
Sbjct: 148 EAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREE 207
Query: 353 KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
            L+ AK  GAD  +    N S ++  + I  + QG+  D  ID +  E T+ +
Sbjct: 208 ALEAAKRAGADYVI----NASSQDPVSEIRRITQGKGADAVIDLNNSEKTLSI 256

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 30/146 (20%)
Query: 244 CRTCTYCKEGRYNLCRQIF---FCATPP---------DHGNLSRYYRHAADFCH------ 285
           C  CT C  G    C + F   F              D G ++ ++   + F        
Sbjct: 94  CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRE 153
Query: 286 ----KLPDHVSLEEGALLEPLSVGVH----ACRRA-GVTLGSKVLITGAGPIGLVTLLTA 336
               K+   V +E   LL PL  G+     AC  A  VT  S  +  GAG +GL  LL A
Sbjct: 154 NNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAA 210
Query: 337 RALGASRVVITDILEHKLKTAKEMGA 362
           +  GAS ++  DI+E +L+ AK++GA
Sbjct: 211 KVCGASIIIAVDIVESRLELAKQLGA 236

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 69  LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
           L++ FS+   E  P   P  HEV ++M  VGICG+D H ++    G      P+I+GHEA
Sbjct: 17  LKKPFSIEEVEVAP---PKAHEVRIKMVAVGICGTDDHVVS----GTMVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
           +GIV  VG  V  +K
Sbjct: 70  AGIVESVGEGVTTVK 84

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLCRQI---------------FFCATPPDH-----GNLSRYYRHAADF 283
           C  C  CK    N C +                F C   P H        S+Y     + 
Sbjct: 97  CGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
             K+     LE+  L+    S G   A   A VT GS   + G G +GL  ++  +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
           +R++  DI + K   AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           LP  + LE   ++ + ++ G H    A + LG  V + G GP+GL+++  A  LGA R+ 
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIF 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
                +H    A E GA   +    N+   +I   I++   G+  DK +   G
Sbjct: 196 AVGSRKHCCDIALEYGATDII----NYKNGDIVEQILKATDGKGVDKVVIAGG 244

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 69  LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
           +++ FS+   E  P   P  +EV ++M  VGICG+D H ++    G+     P+I+GHEA
Sbjct: 17  VKKPFSIEDVEVAP---PKAYEVRIKMVAVGICGTDDHVVS----GNLVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
           +GIV  VG  V  +K
Sbjct: 70  AGIVESVGEGVTTVK 84

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLC---------------RQIFFCATPPDH-----GNLSRYYRHAADF 283
           C  C  CK    N C                + F C   P H        S+Y     + 
Sbjct: 97  CGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
             K+     LE+  L+    S G   A   A VT GS   + G G +GL  ++  +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
           +R++  DI + K   AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 69  LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
           L++ FS+   E  P   P  HEV ++M   GIC SD H ++    G+     P+I+GHEA
Sbjct: 17  LKKPFSIEEVEVAP---PKAHEVRIKMVAAGICRSDEHVVS----GNLVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
           +GIV  VG  V  +K
Sbjct: 70  AGIVESVGEGVTTVK 84

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLC---------------RQIFFCATPPDH-----GNLSRYYRHAADF 283
           C  C  CK    N C                + F C+  P H        S+Y     + 
Sbjct: 97  CGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
             K+     LE+  L+    S G   A + A VT GS   + G G +GL  ++  +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
           +R++  DI + K   AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 30/189 (15%)
Query: 244 CRTCTYCKEGRYNLCRQI----------------FFCATPPDH-----GNLSRYYRHAAD 282
           CR C +CK G+ NLC ++                F     P +        S+Y      
Sbjct: 98  CRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDV 157
Query: 283 FCHKLPDHVSLEEGALLE---PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
              K+     L++  LL    P  +G      A V  GS V I G G +GL     A+  
Sbjct: 158 SVAKIDPTAPLDKVCLLGCGVPTGLGA-VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTA 216
Query: 340 GASRVVITDILEHKLKTAKEMGADATV-LIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
           GASR++  DI   K +TAK+ G +  V   D +  ++E+   I++L  G   D + +C G
Sbjct: 217 GASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEV---IVDLTDG-GVDYSFECIG 272
Query: 399 IESTIKLGM 407
             S ++  +
Sbjct: 273 NVSVMRAAL 281

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 73/185 (39%), Gaps = 28/185 (15%)
Query: 244 CRTCTYCKEGRYNLCRQI----------------FFCATPPDH-----GNLSRYYRHAAD 282
           CR C +CK G+ NLC ++                F     P +        S+Y      
Sbjct: 116 CRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 175
Query: 283 FCHKLPDHVSLEEGALLE---PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
              K+     LE+  LL    P  +G      A V  GS V + G G +GL     A+A 
Sbjct: 176 SVAKIDPVAPLEKVCLLGCGVPTGLGA-VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA 234
Query: 340 GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGI 399
           GASR++  DI   K   AK  G   T  I+     + I   I++L  G   D + +C G 
Sbjct: 235 GASRIIGIDIDSKKFDRAKNFG--VTEFINPKEHEQPIQQVIVDLTDGGV-DYSFECIGN 291
Query: 400 ESTIK 404
            S ++
Sbjct: 292 VSVMR 296

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           LP  + LE   ++ + ++ G H    A + LG+ V + G GP+GL+ +  A+  GA R++
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
                   +  AK  GA   V    N+    I + I+ L +G+  D  I   G
Sbjct: 196 AVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGG 244

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           LP  + LE   ++ + ++ G H    A + LG+ V + G GP+GL+ +  A+  GA R++
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
                   +  AK  GA   V    N+    I + I+ L +G+  D  I   G
Sbjct: 196 AVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGG 244

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 221 TGAGNAIKVMIHCDRVAIEPGVP-----CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSR 275
           +  G+ +  +   DRV    GVP     C  C +C +G   LC +        + G    
Sbjct: 70  SAVGSGVSRVKEGDRV----GVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVN-GGYGE 124
Query: 276 YYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVT---LGSKVLITGAGPIGLVT 332
           Y     ++   LPD V   E A +  L  GV   +   VT    G  V+I+G G +G V 
Sbjct: 125 YVVADPNYVGLLPDKVGFVEIAPI--LCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVA 182
Query: 333 LLTARALGASRVVITDILEHKLKTAKEMGADATV 366
           +  ARA+G  RV   DI + KL  A+ +GA+  V
Sbjct: 183 VQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAV 215

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALLEPL-SVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           LP  +  E+  +L  + + G H    A + LG  V + G GP+GL+++  A  LGA R+ 
Sbjct: 136 LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIF 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
                +H    A E GA   +    N+   +I   I++   G+  DK +   G
Sbjct: 196 AVGSRKHCCDIALEYGATDII----NYKNGDIVEQILKATDGKGVDKVVIAGG 244

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALLEPL-SVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           LP  +  E+  +L  + + G H    A + LG  V + G GP+GL+++  A  LGA R+ 
Sbjct: 136 LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIF 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
                +H    A E GA   +    N+   +I   I++   G+  DK +   G
Sbjct: 196 AVGSRKHCCDIALEYGATDII----NYKNGDIVEQILKATDGKGVDKVVIAGG 244

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           LP  + LE   ++ + ++ G H    A + LG+ V + G GP+GL+ +  A+  GA R++
Sbjct: 136 LPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
                   +  AK  GA   V    N+    I + I+ L +G+  D  I   G
Sbjct: 196 AVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGG 244

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68  ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
           +++ + ++ + E+KP       +  P  HEV ++M   GIC SD H ++    G      
Sbjct: 6   VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
           P+I GHEA+GIV  +G  V  +   RPG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTV---RPG 86

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
           A + A VT GS   + G G +GL  ++  +A GA+R++  DI + K   AKE+GA   V 
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
             D    ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68  ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
           +++ + ++ + E+KP       +  P  HEV ++M   GIC SD H ++    G      
Sbjct: 6   VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
           P+I GHEA+GIV  +G  V  +   RPG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTV---RPG 86

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
           A + A VT GS   + G G +GL  ++  +A GA+R++  DI + K   AKE+GA   V 
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
             D    ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68  ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
           +++ + ++ + E+KP       +  P  HEV ++M   GIC SD H ++    G      
Sbjct: 6   VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
           P+I GHEA+GIV  +G  V  +   RPG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTV---RPG 86

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
           A + A VT GS   + G G +GL  ++  +A GA+R++  DI + K   AKE+GA   V 
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
             D    ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68  ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
           +++ + ++ + E+KP       +  P  HEV ++M   GIC SD H ++    G      
Sbjct: 6   VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
           P+I GHEA+GIV  +G  V  +   RPG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTV---RPG 86

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68  ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
           +++ + ++ + E+KP       +  P  HEV ++M   GIC SD H ++    G      
Sbjct: 6   VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
           P+I GHEA+GIV  +G  V  +   RPG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTV---RPG 86

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
           A + A VT GS   + G G +GL  ++  +A GA+R++  DI + K   AKE+GA   V 
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
             D    ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68  ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
           +++ + ++ + E+KP       +  P  HEV ++M   GIC SD H ++    G      
Sbjct: 6   VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
           P+I GHEA+GIV  +G  V  +   RPG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTV---RPG 86

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
           A + A VT GS   + G G +GL  ++  +A GA+R++  DI + K   AKE+GA   V 
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
             D    ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68  ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
           +++ + ++ + E+KP       +  P  HEV ++M   GIC SD H ++    G      
Sbjct: 6   VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
           P+I GHEA+GIV  +G  V  +   RPG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTV---RPG 86

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68  ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
           +++ + ++ + E+KP       +  P  HEV ++M   GIC SD H ++    G      
Sbjct: 6   VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
           P+I GHEA+GIV  +G  V  +   RPG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTV---RPG 86

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
           A + A VT GS   + G G +GL  ++  +A GA+R++  DI + K   AKE+GA   V 
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
             D    ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68  ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
           +++ + ++ + E+KP       +  P  HEV ++M   GIC SD H ++    G      
Sbjct: 6   VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
           P+I GHEA+GIV  +G  V  +   RPG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTV---RPG 86

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
           A + A VT GS   + G G +GL  ++  +A GA+R++  DI + K   AKE+GA   V 
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
             D    ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 224 GNAIKVMIHCDRVAIEPGV--PCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAA 281
           G+ +K +   DRV I P +   C  C +C  G   LC +        + G  + Y     
Sbjct: 96  GSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEEQLNTGYSVN-GGFAEYVVADP 153
Query: 282 DFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVT---LGSKVLITGAGPIGLVTLLTARA 338
           +F   LP ++   E A +  L  GV   +   VT    G  V+I+G G +G + +  ARA
Sbjct: 154 NFVGHLPKNIDFNEIAPV--LCAGVTVYKGLKVTDTKPGDWVVISGIGGLGHMAVQYARA 211
Query: 339 LGASRVVITDILEHKLKTAKEMGADATV 366
           +G + V   DI + KL  A+ +GA  TV
Sbjct: 212 MGLN-VAAVDIDDRKLDLARRLGATVTV 238

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 69  LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
           +++ FS+   E  P   P  +EV ++M  VGIC +D H ++    G+     P+I+GHEA
Sbjct: 17  VKKPFSIEDVEVAP---PKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
           +GIV  VG  V  +K
Sbjct: 70  AGIVESVGEGVTTVK 84

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLC---------------RQIFFCATPPDH-----GNLSRYYRHAADF 283
           C  C  CK    N C                + F C   P H        S+Y     + 
Sbjct: 97  CGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
             K+     LE+  L+    S G   A   A VT GS   + G G +GL  ++  +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
           +R++  DI + K   AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 69  LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
           +++ FS+   E  P   P  +EV ++M  VGIC +D H ++    G+     P+I+GHEA
Sbjct: 17  VKKPFSIEDVEVAP---PKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
           +GIV  VG  V  +K
Sbjct: 70  AGIVESVGEGVTTVK 84

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLC---------------RQIFFCATPPDH-----GNLSRYYRHAADF 283
           C  C  CK    N C                + F C   P H        S+Y     + 
Sbjct: 97  CGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
             K+     LE+  L+    S G   A   A VT GS   + G G +GL  ++  +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
           +R++  DI + K   AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 27/198 (13%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHG------NLSRYY 277
           G+ +++M   D V++   V C  C  CKE R ++C         PD        +L  + 
Sbjct: 76  GSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNL---VNPDADLGAFGFDLKGWS 132
Query: 278 RHAADFCH-KLPDHVSLEEGA-------------LLEPLSVGVHACRRAGVTLGSKVLIT 323
              A++      D++ L+ G              + + L  G H C  AGV  GS V I 
Sbjct: 133 GGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIA 192
Query: 324 GAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE 383
           GAGP+G      AR LGA+ V++ D    +LK   + G +   L  RN +   +   I +
Sbjct: 193 GAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDL--RNSA--PLRDQIDQ 248
Query: 384 LLQGEQPDKTIDCSGIES 401
           +L   + D  +D  G E+
Sbjct: 249 ILGKPEVDCGVDAVGFEA 266

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 69  LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
           +++ FS+   E  P   P  +EV ++M  VGIC +D H ++    G+     P+I+GHEA
Sbjct: 17  VKKPFSIEDVEVAP---PKAYEVRIKMVAVGICHTDDHVVS----GNLVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
           +GIV  VG  V  +K
Sbjct: 70  AGIVESVGEGVTTVK 84

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLC---------------RQIFFCATPPDH-----GNLSRYYRHAADF 283
           C  C  CK    N C                + F C   P H        S+Y     + 
Sbjct: 97  CGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
             K+     LE+  L+    S G   A   A VT GS   + G G +GL  ++  +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
           +R++  DI + K   AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIG 329
           + S+Y   +     ++ D  +LE   L+    S G  A    A VT GS   + G G +G
Sbjct: 149 SFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVG 208
Query: 330 LVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ 389
           L  ++  +  GASR++  DI   K   AK +GA   +       L++    +I  L    
Sbjct: 209 LSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL---NPRELDKPVQDVITELTAGG 265
Query: 390 PDKTIDCSGIESTIK 404
            D ++DC+G   T+K
Sbjct: 266 VDYSLDCAGTAQTLK 280

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 70  RRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEAS 129
           ++ FS+   E  P   P  HEV ++M   GIC SD H ++    G      P+I GHEA+
Sbjct: 18  KKPFSIEEVEVAP---PKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAA 70
Query: 130 GIVSKVGAKVKHLKATRPG 148
           GIV  +G  V  +   RPG
Sbjct: 71  GIVESIGEGVTTV---RPG 86

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 32/165 (19%)
Query: 244 CRTCTYCKEGRYNLCRQI--------------FFCATPPDHGNLSRYYRHAADFC-HKLP 288
           C  C+ CK    NLC +               F C   P H     ++   + F  + + 
Sbjct: 97  CGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIH-----HFLGTSTFSQYTVV 151
Query: 289 DHVSLEEGALLEPL----------SVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTAR 337
           D +S+ +     PL          S G   A + A VT GS   + G G +GL  ++  +
Sbjct: 152 DEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK 211
Query: 338 ALGASRVVITDILEHKLKTAKEMGADATV-LIDRNHSLEEISTHI 381
           A GA+R++  DI + K   AKE+GA   V   D    ++E+ T +
Sbjct: 212 AAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 256

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 70  RRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEAS 129
           ++ FS+   E  P   P  HEV ++M   GIC SD H ++    G      P+I GHEA+
Sbjct: 18  KKPFSIEEVEVAP---PKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAA 70
Query: 130 GIVSKVGAKVKHLKATRPG 148
           GIV  +G  V  +   RPG
Sbjct: 71  GIVESIGEGVTTV---RPG 86

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 32/165 (19%)
Query: 244 CRTCTYCKEGRYNLCRQI--------------FFCATPPDHGNLSRYYRHAADFC-HKLP 288
           C  C+ CK    NLC +               F C   P H     ++   + F  + + 
Sbjct: 97  CGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIH-----HFLGTSTFSQYTVV 151
Query: 289 DHVSLEEGALLEPL----------SVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTAR 337
           D +S+ +     PL          S G   A + A VT GS   + G G +GL  ++  +
Sbjct: 152 DEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK 211
Query: 338 ALGASRVVITDILEHKLKTAKEMGADATV-LIDRNHSLEEISTHI 381
           A GA+R++  DI + K   AKE+GA   V   D    ++E+ T +
Sbjct: 212 AAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 256

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIG 329
           + S+Y   +     ++ D  +LE   L+    S G  A    A VT GS   + G G +G
Sbjct: 149 SFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVG 208
Query: 330 LVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ 389
           L  ++  +  GASR++  DI   K   AK +GA   +       L++    +I  L    
Sbjct: 209 LSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL---NPRELDKPVQDVITELTAGG 265
Query: 390 PDKTIDCSGIESTIK 404
            D ++DC+G   T+K
Sbjct: 266 VDYSLDCAGTAQTLK 280

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 224 GNAIKVMIHCDRVAIEPGVP-----CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR 278
           G+ +  +   DRV    G+P     C  C +C  G   LC          + G  + Y  
Sbjct: 77  GSGVTRVKEGDRV----GIPWLYTACGCCEHCLTGWETLCESQQNTGYSVN-GGYAEYVL 131
Query: 279 HAADFCHKLPDHVSLEEGALLEPLSVGVH-ACRRAGVTLGSKVLITGAGPIGLVTLLTAR 337
              ++   LP +V   E A +    V V+   ++     G  V I+G G +G V +  AR
Sbjct: 132 ADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQYAR 191
Query: 338 ALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHI 381
           A+G   V   DI + KL+ A+++GA  TV   +   +E I   I
Sbjct: 192 AMGL-HVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDI 234

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 70  RRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEAS 129
           ++ FS+   E  P   P   EV +++   GIC +D H +    +  F    P+IVGHEA+
Sbjct: 18  KQPFSIEEIEVAP---PKTKEVRIKILATGICRTDDHVIKGTMVSKF----PVIVGHEAT 70
Query: 130 GIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEID 174
           GIV  +G  V  +K   PG           D  IPL L   +E +
Sbjct: 71  GIVESIGEGVTTVK---PG-----------DKVIPLFLPQCRECN 101

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 244 CRTCTYCKEGRYNLC-------RQI-------FFCATPPDH-----GNLSRYYRHAADFC 284
           CR C  C+    NLC       R +       F C   P H        + Y        
Sbjct: 97  CRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSV 156
Query: 285 HKLPDHVSLEEGALLE-PLSVGVHACRRAG-VTLGSKVLITGAGPIGLVTLLTARALGAS 342
            K+ D    E+  L+    S G  A  + G V  GS  ++ G G +GL  ++  ++ GAS
Sbjct: 157 AKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGAS 216
Query: 343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL 384
           R++  D+  +K K  K M   AT  I    S + IS  + E+
Sbjct: 217 RIIGIDL--NKDKFEKAMAVGATECISPKDSTKPISEVLSEM 256

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 70  RRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEAS 129
           ++ FS+   E  P   P   EV +++   GIC +D H +    +  F    P+IVGHEA+
Sbjct: 18  KQPFSIEEIEVAP---PKTKEVRIKILATGICRTDDHVIKGTMVSKF----PVIVGHEAT 70
Query: 130 GIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEID 174
           GIV  +G  V  +K   PG           D  IPL L   +E +
Sbjct: 71  GIVESIGEGVTTVK---PG-----------DKVIPLFLPQCRECN 101

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 244 CRTCTYCKEGRYNLC-------RQI-------FFCATPPDH-----GNLSRYYRHAADFC 284
           CR C  C+    NLC       R +       F C   P H        + Y        
Sbjct: 97  CRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSV 156
Query: 285 HKLPDHVSLEEGALLE-PLSVGVHACRRAG-VTLGSKVLITGAGPIGLVTLLTARALGAS 342
            K+ D    E+  L+    S G  A  + G V  GS  ++ G G +GL  ++  ++ GAS
Sbjct: 157 AKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGAS 216
Query: 343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL 384
           R++  D+  +K K  K M   AT  I    S + IS  + E+
Sbjct: 217 RIIGIDL--NKDKFEKAMAVGATECISPKDSTKPISEVLSEM 256

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           LP  + LE   ++ + ++ G H    A + +GS V++ G G +GL+ +  A+  GA R++
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
                   ++ AK  GA   +    N+    I   +++L  G+  D+ I   G   T+
Sbjct: 196 GVGSRPICVEAAKFYGATDIL----NYKNGHIVDQVMKLTNGKGVDRVIMAGGGSETL 249

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 68  ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
           +++ + ++ + E+KP       +  P  HEV ++M   GIC SD   ++    G      
Sbjct: 6   VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
           P+I GHEA+GIV  +G  V  +   RPG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTV---RPG 86

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 307 HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV 366
            A + A VT GS   + G G +GL  ++  +A GA+R++  DI + +   AKE+GA   V
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECV 241
Query: 367 -LIDRNHSLEEISTHI 381
              D    ++E+ T +
Sbjct: 242 NPQDYKKPIQEVLTEM 257

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           LP  + LE   ++ + ++ G H    A + +GS V++ G G +GL+ +  A+  GA R++
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
                   ++ AK  GA   +    N+    I   +++L  G+  D+ I   G   T+
Sbjct: 196 GVGSRPICVEAAKFYGATDIL----NYKNGHIVDQVMKLTNGKGVDRVIMAGGGSETL 249

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           LP  + LE   ++ + ++ G H    A + +GS V++ G G +GL+ +  A+  GA R++
Sbjct: 136 LPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
                   ++ AK  GA   +    N+    I   +++L  G+  D+ I   G   T+
Sbjct: 196 GVGSRPICVEAAKFYGATDIL----NYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETL 249

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 35/198 (17%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGN-------LSRY 276
           G+ +K     DRV     VPC T  +         R +   A  P H N        S +
Sbjct: 69  GSEVKDFKPGDRVI----VPCTTPDW---------RSLEVQAGFPQHSNGMLAGWKFSNF 115
Query: 277 -------YRHAADFCHKL---PDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGA 325
                  Y H  D    L   P  + LE   ++ + ++ G H    A + +GS V++ G 
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGI 175
Query: 326 GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELL 385
           G +GL+ +  A+  GA R++        ++ AK  GA   +    N+    I   +++L 
Sbjct: 176 GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDIL----NYKNGHIVDQVMKLT 231
Query: 386 QGEQPDKTIDCSGIESTI 403
            G+  D+ I   G   T+
Sbjct: 232 NGKGVDRVIMAGGGSETL 249

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           LP  + LE   ++ + ++ G H    A + +GS V++ G G +GL+ +  A+  GA R++
Sbjct: 136 LPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
                   ++ AK  GA   +    N+    I   +++L  G+  D+ I   G   T+
Sbjct: 196 GVGSRPICVEAAKFYGATDIL----NYKNGHIVDQVMKLTNGKGVDRVIMAGGGSETL 249

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 75/189 (39%), Gaps = 30/189 (15%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHA------------- 280
           D V++   V C  C  CKE    +C        P   G    Y                 
Sbjct: 87  DLVSVPFNVACGRCRSCKEMHTGVC----LTVNPARAGGAYGYVDMGDWTGGQAEYVLVP 142
Query: 281 -ADF-CHKLPDHVSLEEG-----ALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTL 333
            ADF   KLPD     E       L + L  G H    AGV  GS V + GAGP+GL   
Sbjct: 143 YADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAA 202
Query: 334 LTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEE-ISTHIIELLQGEQPDK 392
            +AR LGA+ V++ D+   +L  AK  G +   L     SL+  +   I  LL   + D 
Sbjct: 203 ASARLLGAAVVIVGDLNPARLAHAKAQGFEIADL-----SLDTPLHEQIAALLGEPEVDC 257
Query: 393 TIDCSGIES 401
            +D  G E+
Sbjct: 258 AVDAVGFEA 266

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           E   +  P  HEV +++   GICGSD   L       F    P+I+GHEA G+V  +GA 
Sbjct: 25  ETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHEAVGVVESIGAG 80
Query: 139 VKHLK 143
           V  +K
Sbjct: 81  VTCVK 85

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATP---PD-------HGNLSRYYRHAADFC-HKLPDHVS 292
           C  C +C   + NLC++I         PD        G    +Y   + F  + +   +S
Sbjct: 96  CGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADIS 155
Query: 293 LEEGALLEPL----------SVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
           + +   L PL          S G  A    A +  GS   + G G +GL  ++  +  GA
Sbjct: 156 VAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGA 215
Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
           SR++  DI + K   AKE G  AT  I+     + I   +IE+  G   D + +C G
Sbjct: 216 SRIIGVDINKDKFARAKEFG--ATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIG 269

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 88  DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           DH++ +++   G+CGSD+H    G  G+ ++  P++VGHE  G V K+G K
Sbjct: 33  DHDIDIKIEACGVCGSDIH-CAAGHWGNMKM--PLVVGHEIVGKVVKLGPK 80

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATP---PD-------HGNLSRYYRHAADFC-HKLPDHVS 292
           C  C +C   + NLC++I         PD        G    +Y   + F  + +   +S
Sbjct: 97  CGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADIS 156
Query: 293 LEEGALLEPL----------SVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
           + +   L PL          S G  A    A +  GS   + G G +GL  ++  +  GA
Sbjct: 157 VAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
           SR++  DI + K   AKE G  AT  I+     + I   +IE+  G   D + +C G
Sbjct: 217 SRIIGVDINKDKFARAKEFG--ATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIG 270

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATP---PD-------HGNLSRYYRHAADFC-HKLPDHVS 292
           C  C +C   + NLC++I         PD        G    +Y   + F  + +   +S
Sbjct: 97  CGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADIS 156
Query: 293 LEEGALLEPL----------SVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
           + +   L PL          S G  A    A +  GS   + G G +GL  ++  +  GA
Sbjct: 157 VAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
           SR++  DI + K   AKE G  AT  I+     + I   +IE+  G   D + +C G
Sbjct: 217 SRIIGVDINKDKFARAKEFG--ATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIG 270

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATP---PD-------HGNLSRYYRHAADFC-HKLPDHVS 292
           C  C +C   + NLC++I         PD        G    +Y   + F  + +   +S
Sbjct: 96  CGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADIS 155
Query: 293 LEEGALLEPL----------SVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
           + +   L PL          S G  A    A +  GS   + G G +GL  ++  +  GA
Sbjct: 156 VAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGA 215
Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
           SR++  DI + K   AKE G  AT  I+     + I   +IE+  G   D + +C G
Sbjct: 216 SRIIGVDINKDKFARAKEFG--ATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIG 269

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	408
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-84
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	2e-34
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	6e-27
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	2e-21
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	2e-84
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	3e-34
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	2e-26
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	8e-22
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	2e-81
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	6e-36
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	2e-26
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	5e-21
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	2e-76
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	6e-22
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	5e-21
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	2e-16
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	2e-75
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	6e-27
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	7e-25
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	7e-20
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	3e-72
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	3e-25
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-19
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-14
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-70
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	9e-23
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	9e-23
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	4e-18
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-61
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	3e-23
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	4e-18
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	9e-18
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	4e-61
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	6e-18
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-15
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-11
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	2e-50
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	4e-17
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-14
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	9e-11
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	8e-37
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	3e-12
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	8e-12
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	3e-07
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	2e-31
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	4e-09
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	5e-08
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	6e-08
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	4e-28
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-10
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	8e-09
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	1e-06
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	7e-26
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	8e-10
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	6e-07
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	2e-06
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	1e-24
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	4e-12
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-08
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-07
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	2e-22
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	4e-07
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	3e-06
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	8e-06
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	3e-22
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	6e-08
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	3e-06
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	3e-06
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	4e-20
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	1e-09
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	4e-07
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	6e-06
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	3e-17
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	4e-04
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	4e-17
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-12
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	9e-09
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-04
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	5e-17
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	4e-12
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	3e-08
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	2e-16
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	3e-11
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	8e-08
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	6e-04
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	3e-16
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	3e-11
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-07
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-15
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	7e-12
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-07
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-15
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	1e-04
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	9e-15
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	6e-05
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	1e-14
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	2e-10
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	2e-06
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-14
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-10
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-06
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	2e-14
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	6e-12
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	4e-08
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-14
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	6e-13
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	6e-10
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	3e-06
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-11
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	6e-10
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	4e-08
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	3e-11
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-09
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-07
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	4e-11
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	2e-09
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	6e-09
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-10
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	3e-10
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	4e-09
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-07
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	2e-09
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	2e-09
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	1e-07
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	2e-09
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	3e-09
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	6e-09
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	4e-04
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-08
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-04
3gms_A	340	Putative NADPH:quinone reductase; structural genom	5e-08
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-04
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	6e-08
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-05
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	5e-05
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	7e-07
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-06
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	7e-05
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	1e-04
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	3e-06
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-04
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	3e-06
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	5e-06
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	6e-06
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-04
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-05
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	2e-05
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-04
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	3e-05
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-04
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	3e-05
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	3e-05
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-04
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	3e-05
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	4e-05
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	4e-05
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	6e-05
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-04
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	5e-04
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	3e-04
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	5e-04
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	7e-04

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  261 bits (669), Expect = 1e-84
 Identities = 102/174 (58%), Positives = 132/174 (75%), Gaps = 2/174 (1%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRVAIEPG P     +CK GRYNL   IFFCATPPD GNL R+Y+H A FC+KLPD+V+ 
Sbjct: 89  DRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTF 148

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           EEGAL+EPLSVG+HACRR GVTLG KVL+ GAGPIG+VTLL A+A+GA++VV+TD+   +
Sbjct: 149 EEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATR 208

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           L  AKE+GAD  + I    S +EI+  +   L G +P+ TI+C+G E++I+ G+
Sbjct: 209 LSKAKEIGADLVLQI-SKESPQEIARKVEGQL-GCKPEVTIECTGAEASIQAGI 260

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  129 bits (327), Expect = 2e-34
 Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 5/114 (4%)

Query: 127 EASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYP 186
           E +G  + + A    + ATR GG LV+VG GS+   +PL+    +E+DI+GVFRY N +P
Sbjct: 248 ECTGAEASIQAG---IYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWP 304

Query: 187 IALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEP 240
           +A++M+AS  V+VK L+TH + LE  L AFET K   G  +K+M+ CD     P
Sbjct: 305 VAISMLASKSVNVKPLVTHRFPLEKALEAFETFK--KGLGLKIMLKCDPSDQNP 356

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  109 bits (274), Expect = 6e-27
 Identities = 43/70 (61%), Positives = 52/70 (74%), Gaps = 1/70 (1%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSK 134
           LR  E  PI +P  +EVLL MH VGICGSDVHY  +G+IG+F +  PM++GHEASG V K
Sbjct: 19  LRL-ENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEK 77

Query: 135 VGAKVKHLKA 144
           VG+ VKHLK 
Sbjct: 78  VGSSVKHLKP 87

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 93.4 bits (233), Expect = 2e-21
 Identities = 33/50 (66%), Positives = 40/50 (80%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          MH VGICGSDVHY  +G+IG+F +  PM++GHEASG V KVG+ VKHLK 
Sbjct: 38 MHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKP 87

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  261 bits (668), Expect = 2e-84
 Identities = 84/174 (48%), Positives = 110/174 (63%), Gaps = 1/174 (0%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRVAIEP V C  C  C  GRYN C ++ F +TPP  G L RY  H A +CHK+ + +S 
Sbjct: 98  DRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSY 156

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           E GA+LEPLSV +   +RAGV LG  VLI GAGPIGL+T+L A+A GA  +VITDI E +
Sbjct: 157 ENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGR 216

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           LK AKE+  +         S EE +  I+E   G +P   ++C+G+ES+I   +
Sbjct: 217 LKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAI 270

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  129 bits (327), Expect = 3e-34
 Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 3/109 (2%)

Query: 124 VGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYAN 183
           V  E +G+ S + A    + A + GG + ++G G  +++IP +    +E+D++  +RY N
Sbjct: 255 VALECTGVESSIAAA---IWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCN 311

Query: 184 DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
            +P A+ +V +G VD+ +L+TH + LED L AFETA      AIKV I 
Sbjct: 312 TWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQ 360

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  108 bits (271), Expect = 2e-26
 Identities = 24/69 (34%), Positives = 36/69 (52%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSK 134
                 +  E+  + EV + +   GICGSDVH+  HG IG   +    ++GHE++G V  
Sbjct: 27  PSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIA 86

Query: 135 VGAKVKHLK 143
           V   VK +K
Sbjct: 87  VHPSVKSIK 95

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 95.0 bits (237), Expect = 8e-22
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   GICGSDVH+  HG IG   +    ++GHE++G V  V   VK +KV
Sbjct: 47 VRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKV 96

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  253 bits (648), Expect = 2e-81
 Identities = 109/174 (62%), Positives = 129/174 (74%), Gaps = 1/174 (0%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRVA+EPGVPCR C +CKEG+YNLC  + FCATPPD GNL+RYY HAADFCHKLPD+VSL
Sbjct: 86  DRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSL 145

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           EEGALLEPLSVGVHACRRAGV LG+ VL+ GAGPIGLV++L A+A GA  VV T     +
Sbjct: 146 EEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRR 204

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           L+ AK  GAD T+++D     E      I    G+ P+ TIDCSG E  I +G+
Sbjct: 205 LEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGI 258

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  133 bits (338), Expect = 6e-36
 Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 3/108 (2%)

Query: 127 EASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYP 186
           + SG    +      +  TR GG L++VG GSQ V +PLV    +EIDI+ VFRY NDYP
Sbjct: 246 DCSGNEKCITIG---INITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYP 302

Query: 187 IALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234
           IAL MVASG+ +VK+L+TH++ LE T+ AFE A+  A N IKVMI C 
Sbjct: 303 IALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR 350

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  107 bits (270), Expect = 2e-26
 Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%)

Query: 68  ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE 127
           +L ++  LR  EQ+PI +P + EVLL+M  VGICGSDVHY  HG+I DF + DPM++GHE
Sbjct: 9   VLYKQNDLRL-EQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHE 67

Query: 128 ASGIVSKVGAKVKHLKA 144
           ASG V KVG  VKHLK 
Sbjct: 68  ASGTVVKVGKNVKHLKK 84

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 92.3 bits (230), Expect = 5e-21
 Identities = 34/50 (68%), Positives = 38/50 (76%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          M  VGICGSDVHY  HG+I DF + DPM++GHEASG V KVG  VKHLK 
Sbjct: 35 MAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK 84

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  240 bits (614), Expect = 2e-76
 Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 5/174 (2%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D VA  P +PC TC  C +G Y+ C +  F  +  D G  + Y          LP  + +
Sbjct: 79  DAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRD-GGFAEYIVVKRKNVFALPTDMPI 137

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           E+GA +EP++VG+HA   A       V+I GAG IGL+ +  A ALGA  V   DI   K
Sbjct: 138 EDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEK 197

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           L  AK  GA  T     N S          L +       ++ +G+  T++L +
Sbjct: 198 LALAKSFGAMQTF----NSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAV 247

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 95.0 bits (237), Expect = 6e-22
 Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 10/100 (10%)

Query: 142 LKATRPGGCLVIVGAGSQDVKI---PLVLTMTKEIDIRGVFRY------ANDYPIALAMV 192
           ++   P   L +VG   QD+ +        + KE+ + G +          ++  A  ++
Sbjct: 247 VEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLL 306

Query: 193 ASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
              K+ ++ LI H    E    A            KV++ 
Sbjct: 307 TERKLSLEPLIAHRGSFESFAQAVRDIARN-AMPGKVLLI 345

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 92.3 bits (230), Expect = 5e-21
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 68  ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE 127
           +      +R  E    E     EV +++   G+CGSD+  +       +    P+ +GHE
Sbjct: 5   VNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYY----PITLGHE 60

Query: 128 ASGIVSKVGAKVKHLK 143
            SG +  VG+ V  L 
Sbjct: 61  FSGYIDAVGSGVDDLH 76

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 4/50 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+CGSD+  +       +    P+ +GHE SG +  VG+ V  L  
Sbjct: 32 IASSGLCGSDLPRIFKNGAHYY----PITLGHEFSGYIDAVGSGVDDLHP 77

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  237 bits (606), Expect = 2e-75
 Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 7/174 (4%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D V++E  + C  C  C+ G Y++C          D G  + Y    A+     P  +  
Sbjct: 83  DHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRD-GGFAEYVVVPAENAWVNPKDLPF 141

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           E  A+LEP    VH         G  VLITGAGPIGL+  +  RA GA  ++++D   ++
Sbjct: 142 EVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYR 201

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           L  A+            N   E++   +  +  G   +  ++ SG E+ I  G+
Sbjct: 202 LAFARPYADRLV-----NPLEEDLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGL 249

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  109 bits (274), Expect = 6e-27
 Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 8/112 (7%)

Query: 124 VGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTM-TKEIDIRGVF--R 180
           V  E SG  + +      L A  PGG   I+G  S  ++  L   +  + I   G+   R
Sbjct: 234 VLLEFSGNEAAIHQG---LMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRR 290

Query: 181 YANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
               +    A+V SG+VD+  L+TH   L     AF      +G A+KV++ 
Sbjct: 291 LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLA--SGQAVKVILD 340

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  103 bits (259), Expect = 7e-25
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)

Query: 68  ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE 127
            L     L     +P+ +P   E+L+ +    ICG+D+H          R+  P++ GHE
Sbjct: 6   KLAPEEGLTL-VDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHE 64

Query: 128 ASGIVSKVGAKVKHLK 143
            SG+V  VG  V+  +
Sbjct: 65  FSGVVEAVGPGVRRPQ 80

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 89.2 bits (222), Expect = 7e-20
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +    ICG+D+H          R+  P++ GHE SG+V  VG  V+  +V
Sbjct: 32 VEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQV 81

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  230 bits (588), Expect = 3e-72
 Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 3/174 (1%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
            R+  +P + C  C  C+ GR NLCR +       D G  + Y         ++P  +  
Sbjct: 101 ARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRD-GGFAEYVLVPRKQAFEIPLTLDP 159

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
             GA  EPL+  +H    +G+  GS V I G G IGL+T+  AR  GA+ V+++     K
Sbjct: 160 VHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATK 219

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
            + A+E+GA ATV       +E I+      L     D  I+C+G+  T+K   
Sbjct: 220 RRLAEEVGATATVDPSAGDVVEAIAG--PVGLVPGGVDVVIECAGVAETVKQST 271

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  104 bits (263), Expect = 3e-25
 Identities = 23/113 (20%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 124 VGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLT--MTKEIDIRGVFRY 181
           V  E +G+   V       +  + GG +VI+G   Q  K+ +     + +E+ + G F  
Sbjct: 256 VVIECAGVAETVKQS---TRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFIN 312

Query: 182 ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234
              +  A  +VA+G +++ ++I+    L++           A   +KV++   
Sbjct: 313 PFVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPA--AAGEVKVLVIPS 363

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 87.7 bits (218), Expect = 2e-19
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
               I +P   ++L+++   GICG+D H L     G+F  + P+ +GHE  GIV + G+ 
Sbjct: 38  RNVGIPEPGPDDLLVKVEACGICGTDRHLLH----GEFPSTPPVTLGHEFCGIVVEAGSA 93

Query: 139 VKHLK 143
           V+ + 
Sbjct: 94  VRDIA 98

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 73.8 bits (182), Expect = 1e-14
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   GICG+D H L     G+F  + P+ +GHE  GIV + G+ V+ +  
Sbjct: 54 VEACGICGTDRHLLH----GEFPSTPPVTLGHEFCGIVVEAGSAVRDIAP 99

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  224 bits (574), Expect = 1e-70
 Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 6/174 (3%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D V++E  + C  C  C+ G+Y++C+         D G  + Y    A    K P  +  
Sbjct: 87  DYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD-GVFAEYAVVPAQNIWKNPKSIPP 145

Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
           E   L EPL   V      G   G  VLITGAGP+GL+ +  A+A GA  V++++  + +
Sbjct: 146 EYATLQEPLGNAVDTVLA-GPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFR 204

Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
            + AK++GAD  +    N   E++   ++++  G   D  ++ SG    ++ G+
Sbjct: 205 RELAKKVGADYVI----NPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGL 254

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 97.3 bits (243), Expect = 9e-23
 Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 9/112 (8%)

Query: 124 VGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLV-LTMTKEIDIRGVF--R 180
           V  E SG    +      L+A  P G + ++G     V I    L + K + I G+    
Sbjct: 239 VFLEFSGAPKALEQG---LQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRH 295

Query: 181 YANDYPIALAMVASGKVDVKKLITHNY-LLEDTLHAFETAKTGAGNAIKVMI 231
               +     ++ SGK+++  +ITH Y   +    AFE  +  AG   KV+ 
Sbjct: 296 LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMR--AGKTGKVVF 345

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 97.3 bits (243), Expect = 9e-23
 Identities = 19/65 (29%), Positives = 35/65 (53%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
            +  +  P   EVL+++    ICG+D+H     +    R+  P I+GHE +G V ++G  
Sbjct: 20  VEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPG 79

Query: 139 VKHLK 143
           V+ ++
Sbjct: 80  VEGIE 84

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 84.2 bits (209), Expect = 4e-18
 Identities = 16/50 (32%), Positives = 28/50 (56%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +    ICG+D+H     +    R+  P I+GHE +G V ++G  V+ ++V
Sbjct: 36 VLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEV 85

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  202 bits (515), Expect = 1e-61
 Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 24/189 (12%)

Query: 234 DRVAIEPGVP--CRTCTYCKEGRYNLCRQIFFCAT--PPDHGNLSRYYRHAADFCHKLPD 289
           D V      P    T  Y +  + ++     +        HG +S ++     +  ++P 
Sbjct: 81  DIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPR 140

Query: 290 HVSLEEGALLEPLSVGVHACRRAGVTL------GSKVLITGAGPIGLVTLLTARA--LGA 341
             + E G L+EP+S+   A   A  +        S   + G G +GL+TL   +    G 
Sbjct: 141 SQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGY 199

Query: 342 SRVVI---TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
             +      D  +  +   +E+ A       R   +E++          EQ D   + +G
Sbjct: 200 ENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPD------VYEQMDFIYEATG 251

Query: 399 IESTIKLGM 407
                   +
Sbjct: 252 FPKHAIQSV 260

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 98.9 bits (247), Expect = 3e-23
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 68  ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE 127
           + R        E KP  +P+  E L+    VG+CG+D   +  G  G     D +++GHE
Sbjct: 6   VKRGEDRPVVIE-KPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHE 64

Query: 128 ASGIVSKVGAKVKHLKA 144
           A G+V  V      L+ 
Sbjct: 65  AVGVV--VDPNDTELEE 79

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 84.3 bits (209), Expect = 4e-18
 Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 14/117 (11%)

Query: 127 EASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQ-----DVKIPLVLTMTKEIDIRGVFRY 181
           EA+G           ++A  P G   ++G  S      D        +     + G    
Sbjct: 248 EATGFPKHAIQS---VQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNS 304

Query: 182 ANDY--PIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRV 236
             ++     +      K  ++ L+T  + L +   AF+         IK  I    V
Sbjct: 305 HVEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDD----DDTTIKTAIEFSTV 357

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 83.1 bits (206), Expect = 9e-18
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
             VG+CG+D   +  G  G     D +++GHEA G+V  V      L+ 
Sbjct: 32 TLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEE 79

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  202 bits (515), Expect = 4e-61
 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 14/183 (7%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDH--- 290
           + V  E  + C  C  C EG  N C  +       D G  + Y +  A +   L +    
Sbjct: 123 EPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVD-GAFAEYVKVDAKYAWSLRELEGV 181

Query: 291 ----VSLEEGALLEPLSVGVHAC--RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRV 344
                    G+L+EP SV  +A   R  G+  G  V+I G GPIGL  +   +  GAS+V
Sbjct: 182 YEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKV 241

Query: 345 VITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404
           ++++  E +   AKE+GAD  +    + + E     +++   G      ++ +G+   + 
Sbjct: 242 ILSEPSEVRRNLAKELGADHVI----DPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVW 297

Query: 405 LGM 407
             +
Sbjct: 298 PQI 300

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 84.0 bits (208), Expect = 6e-18
 Identities = 20/113 (17%), Positives = 50/113 (44%), Gaps = 6/113 (5%)

Query: 124 VGHEASGIVSKVGAKVKHLKATRPG--GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY 181
           +  EA+G+   V  +++ +     G    + IV      + +   +   +   I G   +
Sbjct: 285 LFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGH 344

Query: 182 A--NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
           +    +P  ++++ASG +D+ K+I+    +E+     +  +T   + +KV + 
Sbjct: 345 SGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQTD-KSLVKVTML 395

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 79  EQKPI-EDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF----RLSDPMIVGHEASGIVS 133
           E+ P        E+++++   GICGSDVH     + G          P+ +GHE SG+V 
Sbjct: 45  EEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVV 104

Query: 134 KVGAKV 139
           + G + 
Sbjct: 105 EAGPEA 110

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 10/60 (16%)

Query: 1   MHCVGICGSDVHYLTHGQIGDF----RLSDPMIVGHEASGIVSKVGAKV------KHLKV 50
           +   GICGSDVH     + G          P+ +GHE SG+V + G +       K  ++
Sbjct: 62  VKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEI 121

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  172 bits (439), Expect = 2e-50
 Identities = 33/186 (17%), Positives = 58/186 (31%), Gaps = 24/186 (12%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCR--QIFFCATPPDHGNLSRYYRHAADFCHKLPDHV 291
           D V       C  C  C  GR + C   +          G +  ++     +  K+P  +
Sbjct: 83  DLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSI 142

Query: 292 SLEEGALLEPLSVGVHACRRA--------------GVTLGSKVLITGAGPIGLVTLLTAR 337
             + G L +PL+    +                  G     KVL+ G GPIG++  L  R
Sbjct: 143 E-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFR 201

Query: 338 ALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS 397
             G    +       +++               N   +++           + D  ID +
Sbjct: 202 TYGLEVWMANRREPTEVEQTVIEETKTNYYNSSN-GYDKLKD------SVGKFDVIIDAT 254

Query: 398 GIESTI 403
           G +  I
Sbjct: 255 GADVNI 260

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 81.3 bits (201), Expect = 4e-17
 Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 11/120 (9%)

Query: 124 VGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQD----VKIPLVLTMTKEIDIRGVF 179
           V  +A+G    +   V  +      G L + G  +          L   +     I G+ 
Sbjct: 249 VIIDATGADVNILGNV--IPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLV 306

Query: 180 RYAN-DYPIALAMVASGKV----DVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234
                 +  A+  +AS K       K LIT    + D     +  +      IK+ I  +
Sbjct: 307 NGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE 366

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 74.0 bits (182), Expect = 1e-14
 Identities = 13/69 (18%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF---RLSDPMIVGHEASGI 131
           ++ ++    +     ++ +     GICG+D   + +G++      +  D +++GHEA G+
Sbjct: 13  VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIV-NGKLTLSTLPKGKDFLVLGHEAIGV 71

Query: 132 VSKVGAKVK 140
           V +      
Sbjct: 72  VEESYHGFS 80

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 62.0 bits (151), Expect = 9e-11
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDF---RLSDPMIVGHEASGIVSKVGAKVK 46
              GICG+D   + +G++      +  D +++GHEA G+V +      
Sbjct: 33 TIYNGICGADREIV-NGKLTLSTLPKGKDFLVLGHEAIGVVEESYHGFS 80

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  136 bits (346), Expect = 8e-37
 Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 12/182 (6%)

Query: 234 DRVAIEPGVPCRTCTYCKEGR-YNLCRQIFFCATPPDHGNLSRY------YR--HAADFC 284
           D +    G+ C  C +CK  +   LC                        +         
Sbjct: 102 DLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDV 161

Query: 285 HKLPDHVSLEEGALLEP-LSVGVHACRR-AGVTLGSKVLITGAGPIGLVTLLTARALGAS 342
            K+ +   L+  A+     +   HA         G  V+I GAGP+GL  ++ AR+LGA 
Sbjct: 162 LKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAE 221

Query: 343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402
            V++     ++LK A+E+GAD T+   R  S+EE    I+++  G   D  ++ +G    
Sbjct: 222 NVIVIAGSPNRLKLAEEIGADLTLNR-RETSVEERRKAIMDITHGRGADFILEATGDSRA 280

Query: 403 IK 404
           + 
Sbjct: 281 LL 282

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 66.5 bits (163), Expect = 3e-12
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 5/72 (6%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           ++  I D     +L+E+   G+CGSDVH        D R+  P+I+GHE +G V +V  +
Sbjct: 33  KEFEISDIPRGSILVEILSAGVCGSDVHMFRG---EDPRVPLPIILGHEGAGRVVEVNGE 89

Query: 139 VKHLKAT--RPG 148
            + L     +PG
Sbjct: 90  KRDLNGELLKPG 101

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 65.3 bits (160), Expect = 8e-12
 Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLT---MTKEIDIRGVF-RYANDYPIALAMVASGKV 197
            +  R GG   + G       +P  +    + K    +G++    + +   +++ +    
Sbjct: 285 SELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQ 344

Query: 198 DVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
            + KLITH   L++   A E  +  +  A+KV+++
Sbjct: 345 LLSKLITHRLPLKEANKALELME--SREALKVILY 377

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVD 51
          +   G+CGSDVH        D R+  P+I+GHE +G V +V  + + L  +
Sbjct: 49 ILSAGVCGSDVHMFRGE---DPRVPLPIILGHEGAGRVVEVNGEKRDLNGE 96

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  121 bits (307), Expect = 2e-31
 Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 9/177 (5%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC--ATPPDHGNLSRYYR-HAADF-CHKLPD 289
           DRV +    P    +  + G +     +      +    G    ++  + AD     LP 
Sbjct: 79  DRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPK 138

Query: 290 HVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITD 348
            + LE   ++ + ++ G H    A + LG  V + G GP+GL+++  A  LGA R+    
Sbjct: 139 EIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVG 198

Query: 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
             +H    A E GA   +    N+   +I   I++   G+  DK +   G   T   
Sbjct: 199 SRKHCCDIALEYGATDII----NYKNGDIVEQILKATDGKGVDKVVIAGGDVHTFAQ 251

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 56.8 bits (138), Expect = 4e-09
 Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 5/63 (7%)

Query: 81  KPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK 140
           KP   P D   ++    V  C SD+H +  G IG       MI+GHEA G V +VG++VK
Sbjct: 19  KPAPGPFD--AIVRPLAVAPCTSDIHTVFEGAIG---ERHNMILGHEAVGEVVEVGSEVK 73

Query: 141 HLK 143
             K
Sbjct: 74  DFK 76

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 53.3 bits (129), Expect = 5e-08
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 6  ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
           C SD+H +  G IG       MI+GHEA G V +VG++VK  K 
Sbjct: 36 PCTSDIHTVFEGAIG---ERHNMILGHEAVGEVVEVGSEVKDFKP 77

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 52.9 bits (128), Expect = 6e-08
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 142 LKATRPGGCLVIVG--AGSQDVKIPLVL--TMTKEIDIRG----VFRYANDYPIALAMVA 193
           +K  +PG  +  V       ++ IP            I G      R        + +V 
Sbjct: 253 VKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRL--RMERLIDLVF 310

Query: 194 SGKVDVKKLITHNY-LLEDTLHAFETAKTGAGNAIKVMI 231
             +VD  KL+TH +   ++   AF   K    + IK ++
Sbjct: 311 YKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVV 349

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  112 bits (282), Expect = 4e-28
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 13/179 (7%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D VA+ P      C YC+ G  +LC    +     D G  + Y              ++ 
Sbjct: 88  DLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFD-GAYAEYVIVPHYKYMYKLRRLNA 146

Query: 294 EEGALLEPLS-VGV---HACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348
            E A   PL+  G+    A R+A +     +L+ GA G +G + +  A+A+  + ++  D
Sbjct: 147 VEAA---PLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 203

Query: 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           + E  ++ AK  GAD  +    N S+++    I  + + +  D  ID +  E T+ +  
Sbjct: 204 VREEAVEAAKRAGADYVI----NASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYP 258

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVH-----YLTHGQIGDFRLSDPMIVGHEASGIVS 133
           ++  +  P   +VL+++   G+C SDVH     +     + D  +  P+ +GHE +G + 
Sbjct: 16  QEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIE 75

Query: 134 KVGAKVKHLK 143
           +VG +V    
Sbjct: 76  EVGDEVVGYS 85

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 55.7 bits (135), Expect = 8e-09
 Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 3/91 (3%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY-ANDYPIALAMVASGKVDVK 200
            KA    G  V+VG    D+     L    EI   G      +D+   + +  +GK  VK
Sbjct: 258 PKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK--VK 315

Query: 201 KLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231
            +IT    LE+   A +  +       +V+I
Sbjct: 316 PMITKTMKLEEANEAIDNLENFKAIGRQVLI 346

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 1  MHCVGICGSDVH-----YLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+C SDVH     +     + D  +  P+ +GHE +G + +VG +V     
Sbjct: 32 VEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  106 bits (266), Expect = 7e-26
 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 12/180 (6%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D V + P V   TC  C+ G    C  + F     D G  + + R +     KLP  +S 
Sbjct: 99  DPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNID-GGFAEFMRTSHRSVIKLPKDISR 157

Query: 294 EEGALLEPLS-VGV---HACRRAGVTL--GSKVLITGAGPIGLVTLLTARALGASRVVIT 347
           E+   + PL+  G+    A ++A  TL  G+ V I G G +G + +   + +  + V+  
Sbjct: 158 EKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIAL 217

Query: 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           D+ E KLK A+ +GAD  V         +    ++EL +G   +  +D  G ++T+    
Sbjct: 218 DVKEEKLKLAERLGADHVVDAR-----RDPVKQVMELTRGRGVNVAMDFVGSQATVDYTP 272

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 58.8 bits (143), Expect = 8e-10
 Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 84  EDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGAKVKHL 142
                 +V++ +   G+C +D+H +  G   +      P  +GHE  G + +V   V+ L
Sbjct: 37  RLEGRFDVIVRIAGAGVCHTDLHLV-QGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGL 95

Query: 143 K 143
           +
Sbjct: 96  E 96

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 50.0 bits (120), Expect = 6e-07
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 5  GICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGAKVKHLKV 50
          G+C +D+H +  G   +      P  +GHE  G + +V   V+ L+ 
Sbjct: 52 GVCHTDLHLV-QGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEK 97

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY-ANDYPIALAMVASGKVDVK 200
                  G L+IVG G  +++ P +  ++ E+   G       +    + +   GKV   
Sbjct: 272 PYLLGRMGRLIIVGYGG-ELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGKV--- 327

Query: 201 KLITHNYLLEDTLHAFE 217
           ++    + L++     E
Sbjct: 328 RVEVDIHKLDEINDVLE 344

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  102 bits (257), Expect = 1e-24
 Identities = 49/183 (26%), Positives = 73/183 (39%), Gaps = 16/183 (8%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPD----HGNLSRYYRHAADFCHKLPD 289
           D VA+     C  C  C  GR N C +       P      G+++ Y    +        
Sbjct: 82  DAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIG 141

Query: 290 HVSLEEGALLEPLSVGV---HACRR--AGVTLGSKVLITGAGPIGLVTLLTARALGASRV 344
            +     A L     G+   HA  R    +  GS  ++ G G +G V +   RA+ A+RV
Sbjct: 142 DLDPVAAAPL--TDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARV 199

Query: 345 VITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404
           +  D+ + +L  A+E+GADA V      S    +  I EL  G+      D  G +STI 
Sbjct: 200 IAVDLDDDRLALAREVGADAAV-----KSGAGAADAIRELTGGQGATAVFDFVGAQSTID 254

Query: 405 LGM 407
              
Sbjct: 255 TAQ 257

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 66.1 bits (162), Expect = 4e-12
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
              P   P   E+LL++   G+C SD+  +       +    P+ +GHE  G V+++G  
Sbjct: 16  VDIPTPTPGPGEILLKVTAAGLCHSDIFVM-DMPAAQYAYGLPLTLGHEGVGTVAELGEG 74

Query: 139 VKHLK 143
           V    
Sbjct: 75  VTGFG 79

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          G+C SD+  +       +    P+ +GHE  G V+++G  V    V
Sbjct: 36 GLCHSDIFVM-DMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV 80

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 9/83 (10%), Positives = 29/83 (34%), Gaps = 6/83 (7%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYAN--DYPIALAMVASGKVDV 199
            +     G + +VG  +          +     +   + +    +    +A+  +G++  
Sbjct: 257 QQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPY-WGTRSELMEVVALARAGRL-- 313

Query: 200 KKLITHNYLLEDTLHAFETAKTG 222
             + T  + L++   A+   + G
Sbjct: 314 -DIHTETFTLDEGPAAYRRLREG 335

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 97.0 bits (242), Expect = 2e-22
 Identities = 55/193 (28%), Positives = 71/193 (36%), Gaps = 40/193 (20%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRY-----YRHA-------- 280
           D V++   V C  C  CKE    +C             N +R      Y           
Sbjct: 87  DLVSVPFNVACGRCRSCKEMHTGVC----------LTVNPARAGGAYGYVDMGDWTGGQA 136

Query: 281 -------ADF-CHKLPDHVSLEEGAL-LEPLS----VGVHACRRAGVTLGSKVLITGAGP 327
                  ADF   KLPD     E    L  LS     G H    AGV  GS V + GAGP
Sbjct: 137 EYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGP 196

Query: 328 IGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
           +GL    +AR LGA+ V++ D+   +L  AK  G    +          +   I  LL  
Sbjct: 197 VGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG--FEIADLSLD--TPLHEQIAALLGE 252

Query: 388 EQPDKTIDCSGIE 400
            + D  +D  G E
Sbjct: 253 PEVDCAVDAVGFE 265

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 50.7 bits (122), Expect = 4e-07
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 8/65 (12%)

Query: 83  IEDPDD----HEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           ++DP      H V+L++    ICGSD H +  G+         +++GHE +G V + G  
Sbjct: 24  MQDPRGKKIEHGVILKVVSTNICGSDQHMV-RGRTT---AQVGLVLGHEITGEVIEKGRD 79

Query: 139 VKHLK 143
           V++L+
Sbjct: 80  VENLQ 84

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
           ICGSD H +  G+         +++GHE +G V + G  V++L++
Sbjct: 44 NICGSDQHMV-RGRTT---AQVGLVLGHEITGEVIEKGRDVENLQI 85

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 21/134 (15%), Positives = 39/134 (29%), Gaps = 30/134 (22%)

Query: 124 VGHEASGIVSKVGAKVKH-------LKATRPGGCLVIVG-------------AGSQDVKI 163
           VG EA G   +              ++ TR  G + I G             A    + I
Sbjct: 262 VGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSI 321

Query: 164 PLVLTMTKEIDIRG----VFRYANDYPIALAMVASGKVDVKKLI-THNYLLEDTLHAFET 218
              L   K          V +Y       +  +   ++++ +++      L+D    +  
Sbjct: 322 RFGLGWAKSHSFHTGQTPVMKYN---RALMQAIMWDRINIAEVVGVQVISLDDAPRGYGE 378

Query: 219 AKTGAGNAIKVMIH 232
              G     K +I 
Sbjct: 379 FDAGV--PKKFVID 390

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 96.6 bits (241), Expect = 3e-22
 Identities = 52/186 (27%), Positives = 72/186 (38%), Gaps = 25/186 (13%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQ----------IFFCATPPDHGNLSRYYR-HAAD 282
           D V++   V C  C  CKE R ++C             F        G  + Y     AD
Sbjct: 86  DLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYAD 145

Query: 283 F-CHKLPDHVS---LEEGALLEPLS----VGVHACRRAGVTLGSKVLITGAGPIGLVTLL 334
           +   K  D        +   L  +S     G H C  AGV  GS V I GAGP+G     
Sbjct: 146 YMLLKFGDKEQAMEKIKDLTL--ISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAA 203

Query: 335 TARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394
            AR LGA+ V++ D    +LK   + G     +  RN     +   I ++L   + D  +
Sbjct: 204 GARLLGAACVIVGDQNPERLKLLSDAG--FETIDLRNS--APLRDQIDQILGKPEVDCGV 259

Query: 395 DCSGIE 400
           D  G E
Sbjct: 260 DAVGFE 265

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 53.4 bits (129), Expect = 6e-08
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 7/64 (10%)

Query: 83  IEDPDD---HEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKV 139
           +E  +    H V+L++    ICGSD H +  G+     +    ++GHE +G V + G+ V
Sbjct: 24  LEHNNRKLEHAVILKVVSTNICGSDQH-IYRGRFI---VPKGHVLGHEITGEVVEKGSDV 79

Query: 140 KHLK 143
           + + 
Sbjct: 80  ELMD 83

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 24/134 (17%), Positives = 39/134 (29%), Gaps = 30/134 (22%)

Query: 124 VGHEASGIVSKVGAKVKH------LKATRPGGCLVIVG-------------AGSQDVKIP 164
           VG EA G+  +   +  +          R GG + I G             AGS  + + 
Sbjct: 262 VGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLD 321

Query: 165 LVLTMTKEIDIRG----VFRYANDYPIALAMVASGKVD--VKKLITHNYLLEDTLHAFET 218
                TK I I      V  Y          +   ++    K +      L+     +  
Sbjct: 322 FGKMWTKSIRIMTGMAPVTNYN---RHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAK 378

Query: 219 AKTGAGNAIKVMIH 232
                G+  K +I 
Sbjct: 379 FD--KGSPAKFVID 390

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 6  ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          ICGSD H +  G+     +    ++GHE +G V + G+ V+ + +
Sbjct: 44 ICGSDQH-IYRGRFI---VPKGHVLGHEITGEVVEKGSDVELMDI 84

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 90.0 bits (224), Expect = 4e-20
 Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 17/182 (9%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D V +       TC YC+EG++N+C+         + G  S Y    +       + +S 
Sbjct: 84  DNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTN-GGFSEYMLVKSSRWLVKLNSLSP 142

Query: 294 EEGALLEPLSVGV---HACRRAGVTLGSK----VLITGAGPIGLVTLLTARALGAS-RVV 345
            E A L     G     A R+A   +       V++ G G + + T+   +AL  +  +V
Sbjct: 143 VEAAPL--ADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIV 200

Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
                +     A E+GAD          +++  + I +L  G      ID  G E T   
Sbjct: 201 GISRSKKHRDFALELGADYVS------EMKDAESLINKLTDGLGASIAIDLVGTEETTYN 254

Query: 406 GM 407
             
Sbjct: 255 LG 256

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           E   I +P   EVL+ +   G+C +D+  +  G         P+I+GHE +G + +VG  
Sbjct: 19  EDVNIPEPQGEEVLIRIGGAGVCRTDLR-VWKGVEAKQGFRLPIILGHENAGTIVEVGE- 76

Query: 139 VKHLK 143
           +  +K
Sbjct: 77  LAKVK 81

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 50.7 bits (122), Expect = 4e-07
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 4/77 (5%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY-ANDYPIALAMVASGKVDVK 200
            K     G +++VG   + V +    T      + G      ND    + +  SGK+   
Sbjct: 256 GKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKI--- 312

Query: 201 KLITHNYLLEDTLHAFE 217
           K       L+D   AF 
Sbjct: 313 KPYIIKVPLDDINKAFT 329

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 46.8 bits (112), Expect = 6e-06
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 5  GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          G+C +D+  +  G         P+I+GHE +G + +VG  +  +K 
Sbjct: 39 GVCRTDLR-VWKGVEAKQGFRLPIILGHENAGTIVEVGE-LAKVKK 82

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 81.1 bits (201), Expect = 3e-17
 Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 11/169 (6%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D V I PG+ C  C  C  G  NLC +          G  + Y           P ++S 
Sbjct: 83  DEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRH-GTYAEYVVLPEANLAPKPKNLSF 141

Query: 294 EEGALLEPLSVGV--HA-CRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDI 349
           EE A + PL+          + GV  G  VL+  A   + +  +  A+  GA RV+ T  
Sbjct: 142 EEAAAI-PLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAG 199

Query: 350 LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
            E KL+ AK +GAD TV    N++  +    +  L  G+  DK +D +G
Sbjct: 200 SEDKLRRAKALGADETV----NYTHPDWPKEVRRLTGGKGADKVVDHTG 244

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 6/91 (6%)

Query: 131 IVSKVGAKV--KHLKATRPGGCLVIVGA-GSQDVKIPLVLTMTKEIDIRGVF-RYANDYP 186
           +V   GA      +KAT  GG + I GA    +  +P      +++ I G      +   
Sbjct: 239 VVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLF 298

Query: 187 IALAMVASGKVDVKKLITHNYLLEDTLHAFE 217
             L  V  GK  +K ++     LE       
Sbjct: 299 PILRFVEEGK--LKPVVGQVLPLEAAAEGHR 327

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 81.5 bits (202), Expect = 4e-17
 Identities = 48/190 (25%), Positives = 72/190 (37%), Gaps = 35/190 (18%)

Query: 244 CRTCTYCKEGRYNLCRQIFFCATPPDHGNL-----SRYYRHAADFCH------------- 285
           C+ C  C     NLC ++     P     L     SR+        H             
Sbjct: 97  CKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVV 156

Query: 286 ------KLPDHVSLEEGALLEPLSVGVH-----ACRRAGVTLGSKVLITGAGPIGLVTLL 334
                 ++ D  +LE   L+     G       A   A VT GS   + G G +GL  ++
Sbjct: 157 SEANLARVDDEANLERVCLI---GCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAII 213

Query: 335 TARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394
             +  GASR++  DI   K   AK +G  AT  ++     + +   I EL  G   D ++
Sbjct: 214 GCKIAGASRIIAIDINGEKFPKAKALG--ATDCLNPRELDKPVQDVITELTAG-GVDYSL 270

Query: 395 DCSGIESTIK 404
           DC+G   T+K
Sbjct: 271 DCAGTAQTLK 280

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 67.6 bits (166), Expect = 1e-12
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           +  P   EV +++    +C +D++     +   F    P+++GHE +GIV  VG  V + 
Sbjct: 28  VSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVVLGHECAGIVESVGPGVTNF 83

Query: 143 KA 144
           K 
Sbjct: 84  KP 85

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 55.7 bits (135), Expect = 9e-09
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +    +C +D++     +   F    P+++GHE +GIV  VG  V + K 
Sbjct: 40 VIATCVCPTDINATDPKKKALF----PVVLGHECAGIVESVGPGVTNFKP 85

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 8/96 (8%)

Query: 142 LKATRPG-GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVF----RYANDYPIALAMVASGK 196
           +  T  G G   +VGA   ++ IP V  +     I G F    +  +  P  ++   + K
Sbjct: 283 VDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNKK 341

Query: 197 VDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
            D+  L+TH    E    A +  K   G +I+ ++ 
Sbjct: 342 FDLDLLVTHALPFESINDAIDLMK--EGKSIRTILT 375

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 80.7 bits (200), Expect = 5e-17
 Identities = 46/188 (24%), Positives = 70/188 (37%), Gaps = 35/188 (18%)

Query: 244 CRTCTYCKEGRYNLC---RQIFFCATPPDHGNLSRYYRHAADFCH--------------- 285
           C  C +C   + NLC   R        PD    SR+        H               
Sbjct: 96  CGECKFCLNPKTNLCQKIRVTQGKGLMPDGT--SRFTCKGKTILHYMGTSTFSEYTVVAD 153

Query: 286 ----KLPDHVSLEEGALLEPLSVGVH-----ACRRAGVTLGSKVLITGAGPIGLVTLLTA 336
               K+     L++  LL     G+      A   A +  GS   + G G +GL  ++  
Sbjct: 154 ISVAKIDPLAPLDKVCLL---GCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGC 210

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396
           +  GASR++  DI + K   AKE G  AT  I+     + I   +IE+  G   D + +C
Sbjct: 211 KVAGASRIIGVDINKDKFARAKEFG--ATECINPQDFSKPIQEVLIEMTDG-GVDYSFEC 267

Query: 397 SGIESTIK 404
            G    ++
Sbjct: 268 IGNVKVMR 275

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 66.1 bits (162), Expect = 4e-12
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLT-HGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH 141
           +  P  HEV +++    +C +D + L+     G F    P+I+GH  +GIV  VG  V  
Sbjct: 26  VAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF----PVILGHLGAGIVESVGEGVTK 81

Query: 142 LK 143
           LK
Sbjct: 82  LK 83

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 54.1 bits (131), Expect = 3e-08
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 1  MHCVGICGSDVHYLT-HGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +    +C +D + L+     G F    P+I+GH  +GIV  VG  V  LK 
Sbjct: 38 IIATAVCHTDAYTLSGADPEGCF----PVILGHLGAGIVESVGEGVTKLKA 84

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 39/188 (20%), Positives = 65/188 (34%), Gaps = 35/188 (18%)

Query: 244 CRTCTYCKEGRYNLC---RQIFFCATPPDHGNLSRYYRHAADFCH--------------- 285
           C  C +C+  + N C                  +R+                        
Sbjct: 98  CGECRFCQSPKTNQCVKGWANESPDVMSPKE--TRFTCKGRKVLQFLGTSTFSQYTVVNQ 155

Query: 286 ----KLPDHVSLEEGALLEPLSVGVH-----ACRRAGVTLGSKVLITGAGPIGLVTLLTA 336
               K+     L+   LL     GV      A   A V  GS   + G G +GL  ++  
Sbjct: 156 IAVAKIDPSAPLDTVCLL---GCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGC 212

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396
            + GA R++  D+   K + AK  G  AT  ++ N   E IS  + ++  G   D +++C
Sbjct: 213 HSAGAKRIIAVDLNPDKFEKAKVFG--ATDFVNPNDHSEPISQVLSKMTNG-GVDFSLEC 269

Query: 397 SGIESTIK 404
            G    ++
Sbjct: 270 VGNVGVMR 277

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 63.4 bits (155), Expect = 3e-11
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 5/62 (8%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHG-QIGDFRLSDPMIVGHEASGIVSKVGAKVKH 141
           ++ P  +E+ +++   G+C +D+++L  G     F    P+++GHE +GIV  VG  V  
Sbjct: 28  VDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF----PVVLGHEGAGIVESVGPGVTE 83

Query: 142 LK 143
            +
Sbjct: 84  FQ 85

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 52.6 bits (127), Expect = 8e-08
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 1  MHCVGICGSDVHYLTHG-QIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+C +D+++L  G     F    P+++GHE +GIV  VG  V   + 
Sbjct: 40 IIATGVCHTDLYHLFEGKHKDGF----PVVLGHEGAGIVESVGPGVTEFQP 86

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 9/97 (9%)

Query: 142 LKATRPG-GCLVIVG-AGSQDVKIPLVLTMTKEIDIRGVF----RYANDYPIALAMVASG 195
           L++   G G  V+VG     DV    +  +      +G      +  +  P  +      
Sbjct: 280 LESCLKGWGVSVLVGWTDLHDVATRPIQLIA-GRTWKGSMFGGFKGKDGVPKMVKAYLDK 338

Query: 196 KVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
           KV + + ITH   LE    A +  K   G  I+ ++ 
Sbjct: 339 KVKLDEFITHRMPLESVNDAIDLMK--HGKCIRTVLS 373

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 78.8 bits (195), Expect = 3e-16
 Identities = 45/188 (23%), Positives = 68/188 (36%), Gaps = 35/188 (18%)

Query: 244 CRTCTYCKEGRYNLC---RQIFFCATPPDHGNLSRYYRHAADFCH--------------- 285
           C  C  CK    N C          T  D    SR+        H               
Sbjct: 97  CGKCRVCKHPEGNFCLKNDLSMPRGTMQDGT--SRFTCRGKPIHHFLGTSTFSQYTVVDE 154

Query: 286 ----KLPDHVSLEEGALLEPLSVGVH-----ACRRAGVTLGSKVLITGAGPIGLVTLLTA 336
               K+     LE+  L+     G       A + A VT GS   + G G +GL  ++  
Sbjct: 155 ISVAKIDAASPLEKVCLI---GCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGC 211

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396
           +A GA+R++  DI + K   AKE+G  AT  ++     + I   + E+  G   D + + 
Sbjct: 212 KAAGAARIIGVDINKDKFAKAKEVG--ATECVNPQDYKKPIQEVLTEMSNG-GVDFSFEV 268

Query: 397 SGIESTIK 404
            G   T+ 
Sbjct: 269 IGRLDTMV 276

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 63.4 bits (155), Expect = 3e-11
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           +  P  HEV ++M   GIC SD H ++    G      P+I GHEA+GIV  +G  V  +
Sbjct: 28  VAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTV 83

Query: 143 K 143
           +
Sbjct: 84  R 84

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 52.6 bits (127), Expect = 1e-07
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          M   GIC SD H ++    G      P+I GHEA+GIV  +G  V  ++ 
Sbjct: 40 MVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRP 85

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 76.4 bits (189), Expect = 1e-15
 Identities = 43/188 (22%), Positives = 69/188 (36%), Gaps = 35/188 (18%)

Query: 244 CRTCTYCKEGRYNLCRQIF---FCATPPDHGNLSRYYRHAADFCH--------------- 285
           C  CT C  G    C + F   F     +  +    +       H               
Sbjct: 94  CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRE 153

Query: 286 ----KLPDHVSLEEGALLEPLSVGVH-----ACRRAGVTLGSKVLITGAGPIGLVTLLTA 336
               K+   V +E      PL  G+            VT  S  +  GAG +GL  LL A
Sbjct: 154 NNTVKVTKDVPIELLG---PLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAA 210

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396
           +  GAS ++  DI+E +L+ AK++GA   +    N   ++    I E+  G   +  ++ 
Sbjct: 211 KVCGASIIIAVDIVESRLELAKQLGATHVI----NSKTQDPVAAIKEITDG-GVNFALES 265

Query: 397 SGIESTIK 404
           +G    +K
Sbjct: 266 TGSPEILK 273

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 65.2 bits (160), Expect = 7e-12
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           I  P   EVL+++   G+C +D+          + +  P ++GHE SGI+  +G  V  L
Sbjct: 26  IRQPQGDEVLVKVVATGMCHTDLIVRD----QKYPVPLPAVLGHEGSGIIEAIGPNVTEL 81

Query: 143 KATRPG 148
           +    G
Sbjct: 82  Q---VG 84

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 52.1 bits (126), Expect = 1e-07
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+C +D+          + +  P ++GHE SGI+  +G  V  L+V
Sbjct: 38 VVATGMCHTDLIVRD----QKYPVPLPAVLGHEGSGIIEAIGPNVTELQV 83

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 76.1 bits (188), Expect = 2e-15
 Identities = 38/169 (22%), Positives = 59/169 (34%), Gaps = 15/169 (8%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRV                GR      +         G LS Y      +    P  +  
Sbjct: 109 DRVISTFAPGWLDGLRPGTGRTPAYETL----GGAHPGVLSEYVVLPEGWFVAAPKSLDA 164

Query: 294 EEGALLEPLSVGV---HA-CRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDI 349
            E + L P   G+    A   +  +  G +V++ G G + L  L  A+A GA  V++T  
Sbjct: 165 AEASTL-PC-AGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSS 221

Query: 350 LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
              KL  A  +GAD  +    N   E+    +  L      D  ++ +G
Sbjct: 222 SREKLDRAFALGADHGI----NRLEEDWVERVYALTGDRGADHILEIAG 266

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 6/91 (6%)

Query: 131 IVSKVGAKV--KHLKATRPGGCLVIVGA-GSQDVKIPLVLTMTKEIDIRGVF-RYANDYP 186
           I+   G     + LKA  P G + ++G     +V  P+   + K   ++G+   +     
Sbjct: 261 ILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALE 320

Query: 187 IALAMVASGKVDVKKLITHNYLLEDTLHAFE 217
             +  V      +K +I   Y   +   A  
Sbjct: 321 DLVGAVDRLG--LKPVIDMRYKFTEVPEALA 349

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 74.5 bits (183), Expect = 9e-15
 Identities = 34/144 (23%), Positives = 50/144 (34%), Gaps = 11/144 (7%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D V + P            G   L  +        + G L+ Y    A      P H++ 
Sbjct: 135 DHVIVHPA-HVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTW 193

Query: 294 EEGALLEPLSVG-----VHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT 347
           EE A+  PL  G     + + R A +  G  VLI GA G +G   +   +  G    V  
Sbjct: 194 EEAAVS-PLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAV 251

Query: 348 DILEHKLKTAKEMGADATVLIDRN 371
                K    + +G D    I+R 
Sbjct: 252 VSSAQKEAAVRALGCDLV--INRA 273

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 44.0 bits (104), Expect = 6e-05
 Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 16/85 (18%)

Query: 74  SLRFREQKPIEDPDDHEVLLEMHCVGICGSDV---------------HYLTHGQIGDFRL 118
           SLR  E  P+ +    EVL+ +    I  + V                    G       
Sbjct: 49  SLRLGEV-PMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHD 107

Query: 119 SDPMIVGHEASGIVSKVGAKVKHLK 143
               ++G + SG+V + G  V+  K
Sbjct: 108 QPYHVLGSDCSGVVVRTGIGVRRWK 132

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score = 73.7 bits (182), Expect = 1e-14
 Identities = 44/141 (31%), Positives = 61/141 (43%), Gaps = 16/141 (11%)

Query: 234 DRVAIEPGVP-----CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLP 288
           DRV    GVP     C  C +C +G   LC +        + G    Y     ++   LP
Sbjct: 83  DRV----GVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVN-GGYGEYVVADPNYVGLLP 137

Query: 289 DHVSLEEGALLEPLSVGV---HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           D V   E A +  L  GV      +      G  V+I+G G +G V +  ARA+G  RV 
Sbjct: 138 DKVGFVEIAPI--LCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVA 194

Query: 346 ITDILEHKLKTAKEMGADATV 366
             DI + KL  A+ +GA+  V
Sbjct: 195 AVDIDDAKLNLARRLGAEVAV 215

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD--PMIVGHEASGIVSKVG 136
           ++ P+  P   +V +++   G+C +D+H       GD+ +    P I GHE  G VS VG
Sbjct: 18  DEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVSAVG 73

Query: 137 AKVKHLK 143
           + V  +K
Sbjct: 74  SGVSRVK 80

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 6/52 (11%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSD--PMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+C +D+H       GD+ +    P I GHE  G VS VG+ V  +K 
Sbjct: 34 IEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE 81

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score = 73.7 bits (182), Expect = 1e-14
 Identities = 53/141 (37%), Positives = 69/141 (48%), Gaps = 16/141 (11%)

Query: 234 DRVAIEPGVP-----CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLP 288
           DRV    G+P     C  C YC  G+  LC          D G  + Y R AAD+  K+P
Sbjct: 81  DRV----GIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-GGYAEYCRAAADYVVKIP 135

Query: 289 DHVSLEEGALLEPLSVGV---HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
           D++S EE A +     GV    A +  G   G  V I G G +G V +  A+A+G   VV
Sbjct: 136 DNLSFEEAAPI--FCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVV 192

Query: 346 ITDILEHKLKTAKEMGADATV 366
             DI + KL+ AKE+GAD  V
Sbjct: 193 AVDIGDEKLELAKELGADLVV 213

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score = 60.6 bits (148), Expect = 2e-10
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 6/67 (8%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD--PMIVGHEASGIVSKVG 136
           ++         EVL+ +   G+C +D+H       GD+ +    P+I GHE  GIV +VG
Sbjct: 16  KEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVEEVG 71

Query: 137 AKVKHLK 143
             V HLK
Sbjct: 72  PGVTHLK 78

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 6/52 (11%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSD--PMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+C +D+H       GD+ +    P+I GHE  GIV +VG  V HLKV
Sbjct: 32 IKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKV 79

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 73.4 bits (181), Expect = 2e-14
 Identities = 42/188 (22%), Positives = 63/188 (33%), Gaps = 36/188 (19%)

Query: 244 CRTCTYCKEGRYNLC---RQIFFCATPPDHGNLSRYYRHAADFCH--------------- 285
           C +C  CK    N C             D    SR+        +               
Sbjct: 98  CGSCRACKSSNSNFCEKNDMGAKTGLMADMT--SRFTCRGKPIYNLMGTSTFTEYTVVAD 155

Query: 286 ----KLPDHVSLEEGALLEPLSVGVH-----ACRRAGVTLGSKVLITGAGPIGLVTLLTA 336
               K+     LE   L+     G       A   A VT GS   + G G +G   ++  
Sbjct: 156 IAVAKIDPKAPLES-CLI---GCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGC 211

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396
           +A GASR++     + K   A E+G  AT  ++     + I   I E   G   D  ++C
Sbjct: 212 KAAGASRIIGVGTHKDKFPKAIELG--ATECLNPKDYDKPIYEVICEKTNG-GVDYAVEC 268

Query: 397 SGIESTIK 404
           +G   T+ 
Sbjct: 269 AGRIETMM 276

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 65.3 bits (160), Expect = 6e-12
 Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 83  IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
           +  P  HEV +++   GICGSD   L       F    P+I+GHEA G+V  +GA V  +
Sbjct: 29  VAPPKAHEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHEAVGVVESIGAGVTCV 84

Query: 143 K 143
           K
Sbjct: 85  K 85

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          +   GICGSD   L       F    P+I+GHEA G+V  +GA V  +K 
Sbjct: 41 ILASGICGSDSSVLKEIIPSKF----PVILGHEAVGVVESIGAGVTCVKP 86

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 73.7 bits (181), Expect = 2e-14
 Identities = 37/164 (22%), Positives = 52/164 (31%), Gaps = 11/164 (6%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D V           +        L  +        + G L+      ++     PDH+S 
Sbjct: 143 DEVVAHCL-SVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSW 201

Query: 294 EEGALLEPLSVG-----VHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT 347
           EE A    L        + +   AG+  G  VLI GA G +G      A A GA   +  
Sbjct: 202 EEAAAP-GLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICV 259

Query: 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391
                K +  + MGA+A   IDRN                E   
Sbjct: 260 VSSPQKAEICRAMGAEAI--IDRNAEGYRFWKDENTQDPKEWKR 301

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 68.4 bits (168), Expect = 6e-13
 Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 23/145 (15%)

Query: 234 DRVAIEPGVP-----CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLP 288
           D      G+      C  C YC+ G  + C      +     G+  +Y    A     +P
Sbjct: 86  DYA----GIKWLNGSCMACEYCELGNESNCPHADL-SGYTHDGSFQQYATADAVQAAHIP 140

Query: 289 DHVSLEEGALLEPLSVGV---HACRRAGVTLGSKVLITGAGPIGL----VTLLTARALGA 341
               L + A +  L  G+    A + A +  G  V I+GA   GL    V    A+A+G 
Sbjct: 141 QGTDLAQVAPI--LCAGITVYKALKSANLMAGHWVAISGAAG-GLGSLAVQY--AKAMGY 195

Query: 342 SRVVITDILEHKLKTAKEMGADATV 366
            RV+  D  E K +  + +G +  +
Sbjct: 196 -RVLGIDGGEGKEELFRSIGGEVFI 219

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 59.5 bits (145), Expect = 6e-10
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 8/78 (10%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD--PMIVGHEASGIVSKVG 136
           +  P+  P  +E+L+ +   G+C +D+H       GD+ L    P++ GHE +G+V  +G
Sbjct: 21  KDIPVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVVGMG 76

Query: 137 AKVKHLKA-TRPG-GCLV 152
             VK  K     G   L 
Sbjct: 77  ENVKGWKIGDYAGIKWLN 94

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 47.9 bits (115), Expect = 3e-06
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSD--PMIVGHEASGIVSKVGAKVKHLKV 50
          +   G+C +D+H       GD+ L    P++ GHE +G+V  +G  VK  K+
Sbjct: 37 VKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKI 84

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 41/149 (27%), Positives = 56/149 (37%), Gaps = 23/149 (15%)

Query: 234 DRVAIEPGV-PCRTCTYCKEGRYNLCRQIFF--CATPPD----HGNLSRYYRHAADFCHK 286
            RV +   V  C  C  CK      C +          D     G  + Y R    F   
Sbjct: 89  QRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVP 148

Query: 287 LPDHVSLEEGA-LL-------EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARA 338
           +P+++     A LL        PL        R G   G KV I G G IG +  L ++A
Sbjct: 149 IPENIPSHLAAPLLCGGLTVYSPL-------VRNGCGPGKKVGIVGLGGIGSMGTLISKA 201

Query: 339 LGASRVVITDILEHKLKTAKEMGADATVL 367
           +GA   VI+     K + A +MGAD  + 
Sbjct: 202 MGAETYVIS-RSSRKREDAMKMGADHYIA 229

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 59.1 bits (144), Expect = 6e-10
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 10/74 (13%)

Query: 85  DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGAKV-KHL 142
              DH++ +++   G+CGSD+H       G +     P++VGHE  G V K+G K    L
Sbjct: 30  PFYDHDIDIKIEACGVCGSDIHCAA----GHWGNMKMPLVVGHEIVGKVVKLGPKSNSGL 85

Query: 143 KATRPGGCLVIVGA 156
           K     G  V VGA
Sbjct: 86  KV----GQRVGVGA 95

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 53.7 bits (130), Expect = 4e-08
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGAKV-KHLKV 50
            C G+CGSD+H       G +     P++VGHE  G V K+G K    LKV
Sbjct: 41 EAC-GVCGSDIHCAA----GHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKV 87

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 63.4 bits (155), Expect = 3e-11
 Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 24/139 (17%)

Query: 244 CRTCTYCKEGRYNLCRQIFFCATPPD--------HGNLSRYYRHAADFCHKLPDHVSLEE 295
           C+ C  CKE +   C ++ F     D         G  S       ++   +  +  LE+
Sbjct: 95  CKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEK 154

Query: 296 GA-LL-------EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT 347
            A LL        PL       + + VT G+KV + G G +G + +  A A+GA   V  
Sbjct: 155 VAPLLCAGITTYSPL-------KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFA 207

Query: 348 DILEHKLKTAKEMGADATV 366
              EHK + A  MG     
Sbjct: 208 -RNEHKKQDALSMGVKHFY 225

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 7/72 (9%)

Query: 85  DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA 144
                +VL+++   GIC SD+H   + +  +     PMI GHE +GI+ +VG  VK  K 
Sbjct: 26  AVGPRDVLIDILYAGICHSDIHSA-YSEWKEGIY--PMIPGHEIAGIIKEVGKGVKKFKI 82

Query: 145 TRPGGCLVIVGA 156
               G +V VG 
Sbjct: 83  ----GDVVGVGC 90

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          ++  GIC SD+H   + +  +     PMI GHE +GI+ +VG  VK  K+
Sbjct: 37 LYA-GICHSDIHSA-YSEWKEGIY--PMIPGHEIAGIIKEVGKGVKKFKI 82

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 63.0 bits (154), Expect = 4e-11
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)

Query: 85  DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGAKVKHLK 143
              + +V  ++   G+C SD+H +      D+  S  P++ GHE  G V++VG+KVK + 
Sbjct: 38  ATGEEDVRFKVLYCGVCHSDLHSIK----NDWGFSMYPLVPGHEIVGEVTEVGSKVKKVN 93

Query: 144 A-TRPG-GCLV 152
              + G GCLV
Sbjct: 94  VGDKVGVGCLV 104

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 6/51 (11%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGAKVKHLKV 50
          ++C G+C SD+H +      D+  S  P++ GHE  G V++VG+KVK + V
Sbjct: 49 LYC-GVCHSDLHSIK----NDWGFSMYPLVPGHEIVGEVTEVGSKVKKVNV 94

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 56.4 bits (137), Expect = 6e-09
 Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 22/139 (15%)

Query: 244 CRTCTYCKEGRYNLCRQIFF--CATPPD----HGNLSRYYRHAADFCHKLPDHVSLEEGA 297
           C +C  C     N C ++     +   D    +G  S +      +  + PD++ L+ GA
Sbjct: 107 CHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGA 166

Query: 298 -LL-------EPLSVGVHACRRAGVTL-GSKVLITGAGPIGLVTLLTARALGASRVVITD 348
            LL        PL       +  G+   G  + I G G +G V +  A+A G+   VI+ 
Sbjct: 167 PLLCAGITVYSPL-------KYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST 219

Query: 349 ILEHKLKTAKEMGADATVL 367
               K +  K  GAD+ ++
Sbjct: 220 SPSKKEEALKNFGADSFLV 238

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 61.1 bits (148), Expect = 2e-10
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 9/121 (7%)

Query: 281 ADFCHKLPDHVSLEEGA--LLEPLSVGVHACRRAGVTLGSKVLITG-AGPIGLVTLLTAR 337
           AD C  LP+  +  +GA   + PL+  +       +   S ++ T  A  +G +      
Sbjct: 135 ADQCLVLPEGATPADGASSFVNPLTA-LGMVETMRLEGHSALVHTAAASNLGQMLNQICL 193

Query: 338 ALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS 397
             G  ++V     + +    K  GA        N +       + E L         D +
Sbjct: 194 KDGI-KLVNIVRKQEQADLLKAQGAVHVC----NAASPTFMQDLTEALVSTGATIAFDAT 248

Query: 398 G 398
           G
Sbjct: 249 G 249

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 33/140 (23%), Positives = 47/140 (33%), Gaps = 24/140 (17%)

Query: 244 CRTCTYCKEGRYNLCRQ-------IFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEG 296
           C+ C  C++G  N C                   G  S+       +  ++         
Sbjct: 113 CKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAA 172

Query: 297 A--LL-------EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT 347
              LL        PL       R      G KV + G G +G + +  A A+GA  V  T
Sbjct: 173 VAPLLCAGITTYSPL-------RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT 225

Query: 348 DILEHKLKTAKEMGADATVL 367
              E K + AK +GAD  V 
Sbjct: 226 -TSEAKREAAKALGADEVVN 244

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 56.9 bits (138), Expect = 4e-09
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%)

Query: 85  DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA 144
           +P  ++V +E+   G+C SD+H +   +        P + GHE  G V  VG +V+    
Sbjct: 44  EPGPNDVKIEIAYCGVCHSDLHQV-RSEWAGTVY--PCVPGHEIVGRVVAVGDQVEKYAP 100

Query: 145 -TRPG-GCLV 152
               G GC+V
Sbjct: 101 GDLVGVGCIV 110

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 1   MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
            +C G+C SD+H +   +        P + GHE  G V  VG +V+    
Sbjct: 55  AYC-GVCHSDLHQV-RSEWAGTVY--PCVPGHEIVGRVVAVGDQVEKYAP 100

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 85  DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA 144
           +    +V + + C GIC +D+H   +   G      PM+ GHE  G V +VG+ V     
Sbjct: 31  ETGPEDVNIRIICCGICHTDLHQTKNDL-GMSNY--PMVPGHEVVGEVVEVGSDVSKFTV 87

Query: 145 -TRPG-GCLV 152
               G GCLV
Sbjct: 88  GDIVGVGCLV 97

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 22/139 (15%)

Query: 244 CRTCTYCKEGRYNLCRQIFF--CATPPD----HGNLSRYYRHAADFCHKLPDHVSLEEGA 297
           C  C+ C+      C +  +       +     G  ++       F  K+P+ +++E+ A
Sbjct: 100 CGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAA 159

Query: 298 -LL-------EPLSVGVHACRRAGVTL-GSKVLITGAGPIGLVTLLTARALGASRVVITD 348
            LL        PL          G+   G +  I G G +G + +  A+A+G    VI+ 
Sbjct: 160 PLLCAGVTVYSPL-------SHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISS 212

Query: 349 ILEHKLKTAKEMGADATVL 367
             + + +  +++GAD  V+
Sbjct: 213 SNKKREEALQDLGADDYVI 231

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 1  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
          + C GIC +D+H   +   G      PM+ GHE  G V +VG+ V    V
Sbjct: 42 ICC-GICHTDLHQTKNDL-GMSNY--PMVPGHEVVGEVVEVGSDVSKFTV 87

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 3/88 (3%)

Query: 281 ADFCHKLPDHVSLEEGA-LLEPLSVGVHACRRAGVTLGSKVLITG-AGPIGLVTLLTARA 338
                 LP+ +S EE A           A +RA    G KVL+   AG +G   +  ARA
Sbjct: 89  KGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARA 148

Query: 339 LGASRVVITDILEHKLKTAKEMGADATV 366
           +G  RV+       KL     +GA+   
Sbjct: 149 MGL-RVLAAASRPEKLALPLALGAEEAA 175

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 9/121 (7%)

Query: 281 ADFCHKLPDHVSLEEGA--LLEPLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTAR 337
           A  C  L D V  E+GA  ++ PL+  +              ++T     +  + +  A+
Sbjct: 128 AAACIPLLDTVRDEDGAAMIVNPLTA-IAMFDIVKQEGEKAFVMTAGASQLCKLIIGLAK 186

Query: 338 ALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS 397
             G  R ++T   + ++   K++GA   +    N    +    + E+++ EQP   +D  
Sbjct: 187 EEGF-RPIVTVRRDEQIALLKDIGAAHVL----NEKAPDFEATLREVMKAEQPRIFLDAV 241

Query: 398 G 398
            
Sbjct: 242 T 242

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 56.0 bits (136), Expect = 6e-09
 Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 10/122 (8%)

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVG-VHAC--RRAGVTLGSKVLITGA-GPIGLVTLLTA 336
               +KLP+ +  ++GA +  +     +      A V  G  VL+ GA G +GL     A
Sbjct: 133 DHTVYKLPEKLDFKQGAAI-GIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIA 191

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396
           RA G  +++ T   E   K   + GA        NH        I + +  +  D  I+ 
Sbjct: 192 RAYGL-KILGTAGTEEGQKIVLQNGAHEVF----NHREVNYIDKIKKYVGEKGIDIIIEM 246

Query: 397 SG 398
             
Sbjct: 247 LA 248

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 12/92 (13%)

Query: 135 VGAKV--KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA--NDYPIALA 190
           +      K L     GG +++VG+    ++I    TM KE  I GV  ++   +     A
Sbjct: 247 LANVNLSKDLSLLSHGGRVIVVGSRGT-IEINPRDTMAKESSIIGVTLFSSTKEEFQQYA 305

Query: 191 -----MVASGKVDVKKLITHNYLLEDTLHAFE 217
                 +  G +    +I   Y LE    A E
Sbjct: 306 AALQAGMEIGWLKP--VIGSQYPLEKVAEAHE 335

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 6/90 (6%)

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVG-VHAC--RRAGVTLGSKVLITGA-GPIGLVTLLTA 336
                  P  +   E   L   +   ++    RR  +  G  VL+ GA G IG   +  A
Sbjct: 122 PSNILPTPPQLDDAEAVAL-IANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIA 180

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATV 366
           + +GA +V+         +  K +GAD  +
Sbjct: 181 KGMGA-KVIAVVNRTAATEFVKSVGADIVL 209

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 14/96 (14%), Positives = 34/96 (35%), Gaps = 16/96 (16%)

Query: 135 VGAKV--KHLKATRPGGCLVIVGAGSQDV-KIPLVLTMTKEIDIRGVF--RYANDYPIAL 189
           +G       ++     G L++VG  +  +  I +   + +   + GV    +   +   L
Sbjct: 235 IGGPAFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYL 294

Query: 190 A--------MVASGKVDVKKLITHNYLLEDTLHAFE 217
                    +VA G   ++  ++    L +   A +
Sbjct: 295 YETQAGLEKLVAEG---MRPPVSARIPLSEGRQALQ 327

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 53.4 bits (129), Expect = 5e-08
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 8/121 (6%)

Query: 281 ADFCHKLPDHVSLEEGA--LLEPLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTAR 337
           ADF   +PD +     A   + PL+  V       +     +L+      IG +    ++
Sbjct: 107 ADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQ 166

Query: 338 ALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS 397
            L   R++         +    +GA   +    + S   +   ++EL  G   D  ID  
Sbjct: 167 ILNF-RLIAVTRNNKHTEELLRLGAAYVI----DTSTAPLYETVMELTNGIGADAAIDSI 221

Query: 398 G 398
           G
Sbjct: 222 G 222

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 31/95 (32%), Positives = 36/95 (37%), Gaps = 12/95 (12%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           E K IE   D+EV + M    I  SD+     G     R+  P I G+E  GIV  VGA 
Sbjct: 23  EYKNIEPLKDNEVFVRMLVRPINPSDL-IPITGAYA-HRIPLPNIPGYEGVGIVENVGAF 80

Query: 139 VKHLK------ATRPGGC---LVIVGAGSQDVKIP 164
           V            R  G     V   A    V IP
Sbjct: 81  VSRELIGKRVLPLRGEGTWQEYVKTSAD-FVVPIP 114

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 53.4 bits (129), Expect = 6e-08
 Identities = 21/142 (14%), Positives = 44/142 (30%), Gaps = 12/142 (8%)

Query: 264 CATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGA--LLEPLSVGVHACRRAGVTLGSKVL 321
                  G        + +   ++P  + L+  A   + P +          +  G  V+
Sbjct: 113 IPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVI 172

Query: 322 ITGA-GPIGLVTLLTARALGASRVVIT----DILEHKLKTAKEMGADATVLIDRNHSLEE 376
              +   +G   +  A ALG  R +        ++      K +GA+  +  +     E 
Sbjct: 173 QNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEM 231

Query: 377 ISTHIIELLQGEQPDKTIDCSG 398
            +          QP   ++C G
Sbjct: 232 KN----FFKDMPQPRLALNCVG 249

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 14/93 (15%)

Query: 142 LKATRPGGCLVIVG-AGSQDVKIPLVLTMTKEIDIRGVF--RYANDYPIA---------L 189
           L+    GG +V  G    Q V   + L + K++ +RG +  ++  D+             
Sbjct: 257 LRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLC 316

Query: 190 AMVASGKVDVKKLITHNYLLEDTLHAFETAKTG 222
            ++  G++           L+D   A E +   
Sbjct: 317 DLIRRGQLTA--PACSQVPLQDYQSALEASMKP 347

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           +   +      +V ++M    I  SD+  +  G  G      P + G+E    V  VG+ 
Sbjct: 45  KNLELAAVRGSDVRVKMLAAPINPSDI-NMIQGNYG-LLPELPAVGGNEGVAQVVAVGSN 102

Query: 139 VKHLK 143
           V  LK
Sbjct: 103 VTGLK 107

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 49.5 bits (119), Expect = 7e-07
 Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 13/112 (11%)

Query: 261 IFFCATPPDHGNLSRYYRHAAD---FCHKLPDHVSLEEGALLEPLSVGV---HACRRAGV 314
           + +  +   HG+ + +     +        PD++S E  A L P    +    A  +  +
Sbjct: 86  VAYHTSLKRHGSFAEF--TVLNTDRVMTL-PDNLSFERAAAL-PC-PLLTAWQAFEKIPL 140

Query: 315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV 366
           T   +VLI G G +  +        G   VV           A + G     
Sbjct: 141 TKQREVLIVGFGAVNNLLTQMLNNAGY--VVDLVSASLSQALAAKRGVRHLY 190

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 22/112 (19%), Positives = 35/112 (31%), Gaps = 17/112 (15%)

Query: 135 VGAKV--KHLKATRPGGCLVIVG-AGSQDVKIPLVLTMTKEIDIRGVF--RYANDYPIA- 188
           VG K      +     G ++  G    Q V IP  L + K     G +      +     
Sbjct: 253 VGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELK 312

Query: 189 -------LAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI--KVMI 231
                  +A    GK  +    +   L + T    E  + G  N+   K +I
Sbjct: 313 TSTLNQIIAWYEEGK--LTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLI 362

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 43.5 bits (103), Expect = 7e-05
 Identities = 22/145 (15%), Positives = 51/145 (35%), Gaps = 22/145 (15%)

Query: 269 DHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHAC-------RRAGVTLGSKVL 321
           +  +  +    A    +  P+ +++ +GA     ++ V+             +T G    
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGA-----TISVNPLTAYLMLTHYVKLTPGKDWF 171

Query: 322 ITGA--GPIGLVTLLTARALGASRVVIT----DILEHKLKTAKEMGADATVLIDRNHSLE 375
           I       +G       + L     +        L+  + + KE+GA   V+ +  ++  
Sbjct: 172 IQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGATQ-VITEDQNNSR 229

Query: 376 EISTHIIELLQ--GEQPDKTIDCSG 398
           E    I E ++  G +    ++C G
Sbjct: 230 EFGPTIKEWIKQSGGEAKLALNCVG 254

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 9/70 (12%)

Query: 82  PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQ--------IGDFRLSDPMIVGHEASGIVS 133
             ++   +EV+++     +  SD+     G          G          G+E    V 
Sbjct: 27  DDDNLAPNEVIVKTLGSPVNPSDI-NQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVI 85

Query: 134 KVGAKVKHLK 143
           KVG+ V  L+
Sbjct: 86  KVGSNVSSLE 95

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 15/138 (10%)

Query: 281 ADFCHKLPDHVSLEEGA--LLEPLSVGVHACRRAGVTLGSKVLITG-AGPIGLVTLLTAR 337
           AD    LP  +S E+ A   L+ L+V     +   +    + L    AG +GL+    A+
Sbjct: 103 ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAK 162

Query: 338 ALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS 397
           ALGA +++ T     K ++A + GA   +    N+  E++   + E+  G++     D  
Sbjct: 163 ALGA-KLIGTVGTAQKAQSALKAGAWQVI----NYREEDLVERLKEITGGKKVRVVYDSV 217

Query: 398 G-------IESTIKLGML 408
           G       ++   + G++
Sbjct: 218 GRDTWERSLDCLQRRGLM 235

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGA 137
            +    DP ++E+ +E   +GI   D +  +    G +     P  +G EA+GIVSKVG+
Sbjct: 19  VEFTPADPAENEIQVENKAIGINFIDTYIRS----GLYPPPSLPSGLGTEAAGIVSKVGS 74

Query: 138 KVKHLKA-TRPGGCLVIVGAGSQDVKIP 164
            VKH+KA  R       +GA S    I 
Sbjct: 75  GVKHIKAGDRVVYAQSALGAYSSVHNII 102

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 9/100 (9%)

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVG-VHAC--RRAGVTLGSKVLITG-AGPIGLVTLLTA 336
            +F +K+PD +S  E A   P++    +      A +  G  VL+    G +G       
Sbjct: 105 VEFVYKIPDDMSFSEAAAF-PMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLC 163

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEE 376
             +     V       K +  K+       L DRN    +
Sbjct: 164 STVPN-VTVFGTASTFKHEAIKDSVTH---LFDRNADYVQ 199

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 47.2 bits (113), Expect = 5e-06
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 10/122 (8%)

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVG-VHAC--RRAGVTLGSKVLI-TGAGPIGLVTLLTA 336
                 +P+ ++L + A + P +             V  G  VLI  G   +G   +   
Sbjct: 125 EGLLMPIPEGLTLTQAAAI-PEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLT 183

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396
           R  GA   ++T   + KL+ A+++GA A      N+  E+ S   ++  +G   +  +DC
Sbjct: 184 RMAGA-IPLVTAGSQKKLQMAEKLGAAAGF----NYKKEDFSEATLKFTKGAGVNLILDC 238

Query: 397 SG 398
            G
Sbjct: 239 IG 240

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 46.8 bits (112), Expect = 6e-06
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 12/123 (9%)

Query: 281 ADFCHKLPDHVSLEEGA--LLEPLSVGVHACRRAGVTLGSKVLITG-AGPIGLVTLLT-- 335
                KL D VS E+ A  +L+ L+V     +   V  G  +L    AG +G   L    
Sbjct: 103 EANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGS--LACQW 160

Query: 336 ARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID 395
           A+ALGA +++ T     K   AK +GA  T+    ++S E+++  ++EL  G++     D
Sbjct: 161 AKALGA-KLIGTVSSPEKAAHAKALGAWETI----DYSHEDVAKRVLELTDGKKCPVVYD 215

Query: 396 CSG 398
             G
Sbjct: 216 GVG 218

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 6/88 (6%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD-PMIVGHEASGIVSKVGA 137
                E P    V++    +G+   D +Y +    G +     P  +G E +G+V  VG 
Sbjct: 19  VDFEPEAPGPQAVVVRNKAIGLNFIDTYYRS----GLYPAPFLPSGLGAEGAGVVEAVGD 74

Query: 138 KVKHLKA-TRPGGCLVIVGAGSQDVKIP 164
           +V   K   R       +GA S+   +P
Sbjct: 75  EVTRFKVGDRVAYGTGPLGAYSEVHVLP 102

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 74  SLRFREQ-KPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIV 132
            L   ++        D EV + M   G+   D   +  G            +G E +G+V
Sbjct: 223 GLALVDEPTATAPLGDGEVRIAMRAAGVNFRDA-LIALGM-----YPGVASLGSEGAGVV 276

Query: 133 SKVGAKVKHLK 143
            + G  V  L 
Sbjct: 277 VETGPGVTGLA 287

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 31/160 (19%), Positives = 47/160 (29%), Gaps = 24/160 (15%)

Query: 262 FFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSV---------------GV 306
             C   PD G  S+Y         K+P  +S E+ A L P  +                 
Sbjct: 96  EMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAAL-PAGISTAGLAMKLLGLPLPSP 154

Query: 307 HACRRAGVTLGSKVLITG-AGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT 365
            A +    +    VL+ G +     VT+   R  G     I     H    AK  GA+  
Sbjct: 155 SADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYI--PIATCSPHNFDLAKSRGAEEV 212

Query: 366 VLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
              D       ++  I    +       +DC     +   
Sbjct: 213 --FDYRA--PNLAQTIRTYTKNN-LRYALDCITNVESTTF 247

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 82  PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH 141
           P       +V + +  V I  SD        +     +    +G + +G V  VG+ V H
Sbjct: 30  PCPMLPRDQVYVRVEAVAINPSDTS------MRGQFATPWAFLGTDYAGTVVAVGSDVTH 83

Query: 142 LK 143
           ++
Sbjct: 84  IQ 85

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSK 134
             + E   +  P   +V L    +G+   D ++             P++VG EA+ +V +
Sbjct: 16  FVWEEV-KVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEE 74

Query: 135 VGAKVKHLKA-TRPGGCLVIVGAGSQDVKIP 164
           VG  V       R   CL  +GA SQ+   P
Sbjct: 75  VGPGVTDFTVGERVCTCLPPLGAYSQERLYP 105

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 14/115 (12%)

Query: 281 ADFCHKLPDHVSLEE----GALLEPLSVGVHACRRAGVTLGSKVLIT-GAGPIGLVTLLT 335
           A+   K+P  + L++    G +L+ ++      +   V  G  VLI   AG +G   ++ 
Sbjct: 106 AEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGH--IMV 163

Query: 336 --ARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGE 388
             AR LGA  V+ T   E K +TA+++G   T+    N+S ++ +  + E+  G+
Sbjct: 164 PWARHLGA-TVIGTVSTEEKAETARKLGCHHTI----NYSTQDFAEVVREITGGK 213

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVG-VHAC--RRAGVTLGSKVLI-TGAGPIGLVTLLTA 336
           A      P      + A L P +   V A   + AG+T G  VLI  G   IG   +  A
Sbjct: 130 AGQILPFPKGYDAVKAAAL-PETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLA 188

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATV 366
           RA GA  V  T     K +  + +GA   +
Sbjct: 189 RAFGA-EVYATAGSTGKCEACERLGAKRGI 217

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSK 134
           +++ +  P+    + E+L++    G+   + ++      G +    P ++G EASG V  
Sbjct: 23  IKYEDY-PVPSISEEELLIKNKYTGVNYIESYFRK----GIYPCEKPYVLGREASGTVVA 77

Query: 135 VGAKVKHLK 143
            G  V + +
Sbjct: 78  KGKGVTNFE 86

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 11/126 (8%)

Query: 279 HAADFCHKLPDHVSLEE-----GALLEPLSVGVHACRRAGVTLGSKVLITG-AGPIGLVT 332
            +     KLP   S EE       LL+ L+          V  G  VL+   AG +GL+ 
Sbjct: 106 SSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLIL 165

Query: 333 LLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK 392
               +  GA   +     + KLK AKE GA+  +    N S E+I   +++   G+  D 
Sbjct: 166 NQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLI----NASKEDILRQVLKFTNGKGVDA 220

Query: 393 TIDCSG 398
           + D  G
Sbjct: 221 SFDSVG 226

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 8/90 (8%)

Query: 281 ADFCHKLPDHVSLEEGALLEPL---SVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTA 336
           A     +P     E   LL       + +      G++ G KVL+T A G  G   +  +
Sbjct: 128 ASIATPVPSVKP-EYLTLLVSGTTAYISLK--ELGGLSEGKKVLVTAAAGGTGQFAMQLS 184

Query: 337 RALGASRVVITDILEHKLKTAKEMGADATV 366
           +      V+ T   + K    K +G D  +
Sbjct: 185 KKAKC-HVIGTCSSDEKSAFLKSLGCDRPI 213

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293

 Score = 44.2 bits (104), Expect = 4e-05
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 291 VSLEEGALLEPLSVGVHACRRAGVTL-GSKVLITGAGPIGLVTLLTARALGASRVVITDI 349
           +   EG ++        A +    T+ G+ V + G G +G+       ALGA +V +   
Sbjct: 135 IPTAEGTIMM-------AIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGAR 186

Query: 350 LEHKLKTAKEMGADATVLIDRNHSLEEI 377
               L    EMG +   +      L ++
Sbjct: 187 ESDLLARIAEMGMEPFHISKAAQELRDV 214

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 43.3 bits (103), Expect = 4e-05
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 14/91 (15%)

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVGV------HA-CRRAGVTLGSKVLI-TGAGPIGLVT 332
           +D    +PD ++  E A     + GV      H+ C    ++ G +VLI +  G +G+  
Sbjct: 1   SDLVVPIPDTLADNEAA-----TFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAA 55

Query: 333 LLTARALGASRVVITDILEHKLKTAKEMGAD 363
           +  A+ +GA R+  T   + K +    +G +
Sbjct: 56  VSIAKMIGA-RIYTTAGSDAKREMLSRLGVE 85

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300

 Score = 43.6 bits (103), Expect = 6e-05
 Identities = 27/135 (20%), Positives = 44/135 (32%), Gaps = 11/135 (8%)

Query: 252 EGRYNLCRQIFFCATPPDH----GNLSRYYRHAADFCH-KLPDHVSLEEGALLEPLSVGV 306
                + +Q     TP       G  + Y  + A     KL      ++ A+   +    
Sbjct: 82  SNEEVVLKQDHLDRTPAHCVIFSGISNAYLENIAAQAKRKLVKLFERDDIAIYNSIPTVE 141

Query: 307 HACRRA----GVTL-GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMG 361
                A      T+ GS+V + G G  G+    T  ALGA  V +       L    EMG
Sbjct: 142 GTIMLAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMG 200

Query: 362 ADATVLIDRNHSLEE 376
                  +    +++
Sbjct: 201 LVPFHTDELKEHVKD 215

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 279 HAADFCHKLPDHVSLEEGALLEPLSVGV---HACRRAGVTLGSKVLITG-AGPIGLVTLL 334
                  K  + +S  + A L P   G+    A  +A V  G  VLI   AG +G + + 
Sbjct: 115 SPDTIIQK-LEKLSFLQAASL-PT-AGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQ 171

Query: 335 TARALGASRVVITDILEHKLKTAKEMGADATV 366
            A+  G +  VIT   +      K +GA+  +
Sbjct: 172 LAKQKGTT--VITTASKRNHAFLKALGAEQCI 201

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 40.6 bits (96), Expect = 5e-04
 Identities = 13/73 (17%), Positives = 32/73 (43%), Gaps = 7/73 (9%)

Query: 75  LRFREQKPIEDPDDHEVLLEMHCVGICGSDVH----YLTHGQIGDFRLSDPMIVGHEASG 130
           L+  +  P  +   +++L+++H   +   D           +     L  P  +G++ SG
Sbjct: 21  LKLVDT-PTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL--PSGLGYDFSG 77

Query: 131 IVSKVGAKVKHLK 143
            V ++G+ V ++ 
Sbjct: 78  EVIELGSDVNNVN 90

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 20/130 (15%)

Query: 260 QIFFCATPPDHGNLSRYYRHAAD---FCHKLPDHVSLEEGALLEPLSVGVHA----CRRA 312
           ++F+  +    G  + +  H  D      K P  +   E A L PL   + A      R 
Sbjct: 108 EVFYAGSIIRPGTNAEF--HLVDERIVGRK-PKTLDWAEAAAL-PL-TSITAWEAFFDRL 162

Query: 313 GVT-----LGSKVLIT-GAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV 366
            V          +LI  GAG +G + +  AR      V+ T       +  K +GA    
Sbjct: 163 DVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHV- 221

Query: 367 LIDRNHSLEE 376
            ID +  L  
Sbjct: 222 -IDHSKPLAA 230

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 11/105 (10%)

Query: 281 ADFCHKLPDHVSLEEGALLEPLSVGVHA----CRRAGVTLGSKVLIT-GAGPIGLVTLLT 335
           A      P  +++ + ++L PL V + A      RA V  G  VLI  G G +G V +  
Sbjct: 113 ARLLASKPAALTMRQASVL-PL-VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQI 170

Query: 336 ARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTH 380
           A A GA   V        L+  +++GA    +       +  + H
Sbjct: 171 ALARGAR--VFATARGSDLEYVRDLGAT--PIDASREPEDYAAEH 211

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 40.5 bits (95), Expect = 7e-04
 Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 20/101 (19%)

Query: 75  LRFREQKPIEDP-DDHEVLLEMHCVGICGSDVH------------YLTHGQIGDFRLSDP 121
           LRF +   +      +EV++++H   +   DV+                  +       P
Sbjct: 36  LRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFP 95

Query: 122 MIVGHEASGIVSKVGAKVKHLKATRPG----GCLVIVGAGS 158
           + +G + SG+V + G  VK+ K   PG      +     G+
Sbjct: 96  LTLGRDVSGVVMECGLDVKYFK---PGDEVWAAVPPWKQGT 133

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	408
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	99.97
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	99.97
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	99.97
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	99.97
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	99.97
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	99.97
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	99.97
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	99.97
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	99.97
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	99.97
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	99.97
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	99.97
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	99.97
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	99.96
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	99.96
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	99.96
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	99.96
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	99.96
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	99.96
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	99.96
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	99.96
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	99.96
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	99.96
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	99.96
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	99.96
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	99.96
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	99.96
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	99.96
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	99.96
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	99.96
3gms_A	340	Putative NADPH:quinone reductase; structural genom	99.96
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	99.96
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	99.96
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	99.96
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	99.96
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	99.96
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	99.96
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	99.96
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	99.96
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	99.96
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	99.96
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	99.96
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	99.96
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	99.96
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	99.95
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	99.95
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	99.95
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	99.95
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	99.95
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	99.95
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	99.95
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	99.95
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	99.95
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	99.95
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	99.95
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	99.95
4eye_A	342	Probable oxidoreductase; structural genomics, niai	99.95
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	99.95
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	99.95
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	99.95
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	99.95
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	99.95
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	99.95
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	99.95
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	99.95
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	99.95
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	99.95
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	99.95
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	99.95
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	99.95
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	99.95
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	99.95
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	99.95
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	99.95
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	99.95
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	99.95
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	99.95
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	99.94
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	99.94
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	99.94
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	99.94
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	99.94
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	99.94
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	99.94
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	99.94
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	99.94
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	99.94
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	99.93
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	99.93
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	99.93
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	99.93
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	99.93
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	99.93
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	99.93
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	99.93
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	99.92
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	99.92
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	99.92
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	99.92
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	99.92
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	99.91
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.91
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	99.88
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	99.87
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	99.85
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	99.85
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	99.85
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	99.84
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	99.83
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.82
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	99.74
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	99.74
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	99.73
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	99.62
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.55
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.52
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	99.49
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	99.48
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	99.45
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	99.45
4eye_A	342	Probable oxidoreductase; structural genomics, niai	99.44
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	99.4
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	99.4
3gms_A	340	Putative NADPH:quinone reductase; structural genom	99.4
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	99.4
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	99.38
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	99.38
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	99.37
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	99.37
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	99.36
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	99.36
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	99.33
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	99.31
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	99.31
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	99.29
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	99.26
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	99.26
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	99.22
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	99.21
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	98.93
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.41
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.35
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.14
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.1
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.09
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	98.04
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	98.03
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	97.99
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.99
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.98
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.97
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.96
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	97.95
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.94
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.94
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.94
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.93
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.93
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.93
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.92
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.91
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	97.91
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.9
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.89
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.88
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.88
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.88
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.87
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.87
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.87
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.86
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.86
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.86
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.86
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.86
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.86
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.86
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.86
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.84
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.84
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.84
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.84
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.83
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.83
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.83
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.83
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.83
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.82
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.81
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.81
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.81
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.81
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.81
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.81
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.81
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.81
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.8
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.8
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.8
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.8
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.8
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.8
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.8
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.79
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.79
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.79
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.78
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.78
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.77
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.77
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.76
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.76
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.76
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.75
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.75
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.74
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.74
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.73
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.73
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.73
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.73
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.73
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.73
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.72
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.72
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.72
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.72
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.72
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.72
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.71
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.71
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.71
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.71
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.71
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.71
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.71
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.71
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.7
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.7
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.7
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.7
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.7
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.69
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.69
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.69
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.69
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.68
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.68
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.68
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.68
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.67
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.67
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.67
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.66
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.66
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.66
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.66
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.66
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.66
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.65
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.65
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.65
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.64
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	97.64
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.64
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.64
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.64
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.63
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.63
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.63
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.63
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.62
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.62
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.62
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.61
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.61
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.61
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.61
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.61
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.61
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.6
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.6
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.6
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.59
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.59
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.59
1spx_A	278	Short-chain reductase family member (5L265); paral	97.59
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.58
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.58
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.58
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.57
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.57
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.55
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.55
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.55
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.55
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.54
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.54
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.54
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.54
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.54
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.54
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.54
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.53
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.53
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.53
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.53
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.52
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.52
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.52
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.51
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.51
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.5
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.5
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.49
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.48
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.48
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.48
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.47
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.46
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.45
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.44
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.44
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.43
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.42
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.41
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.4
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.4
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.39
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.38
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.38
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.37
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.33
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.32
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.31
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.3
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.3
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.3
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.29
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.28
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.28
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.27
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.24
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.23
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.23
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.21
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.2
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.2
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.2
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.2
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.17
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.15
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.14
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.13
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.13
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.12
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.12
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.06
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.06
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.05
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	97.04
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.03
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.01
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.99
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.98
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.97
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.97
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.96
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.94
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.93
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.92
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.92
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.92
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.9
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.9
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.9
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.89
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.89
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.86
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.86
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.84
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.82
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.82
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.81
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.77
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.77
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.76
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.75
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.72
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.7
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.68
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.66
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.65
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.64
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.63
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.6
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.58
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.57
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.57
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.56
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.54
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.54
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.54
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.53
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.52
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	96.51
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.5
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.49
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	96.49
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	96.47
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.46
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.45
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	96.45
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.45
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.43
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.39
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	96.39
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.39
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.34
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.33
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.32
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.3
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.3
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.29
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.29
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.28
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.23
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.22
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	96.19
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.16
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.14
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.12
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	96.12
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	96.09
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.09
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.08
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.06
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.06
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.04
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.03
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.02
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.99
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	95.96
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	95.94
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	95.93
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	95.93
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	95.93
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	95.91
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	95.9
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	95.87
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.86
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.85
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	95.8
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	95.78
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.77
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.76
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	95.76
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	95.73
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.73
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	95.71
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	95.7
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	95.66
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.64
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.62
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.59
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	95.58
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	95.57
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	95.57
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.56
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	95.55
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	95.55
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.47
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	95.45
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	95.3
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	95.29
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	95.24
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.2
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	95.2
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	95.19
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	95.16
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	95.14
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	95.07
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	95.04
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	94.94
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	94.94
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	94.89
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	94.88
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	94.88
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	94.82
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	94.77
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	94.77
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	94.74
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	94.72
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	94.72
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	94.71
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	94.69
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	94.68
4f6c_A	427	AUSA reductase domain protein; thioester reductase	94.65

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=2.5e-34  Score=300.30  Aligned_cols=313  Identities=12%  Similarity=0.147  Sum_probs=243.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc-----cCcccccCCcceecccee
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV-----PEFRNVCLSPILRRRFSL   75 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~-----~~~~~~~~~~~~~~p~~~   75 (408)
                      |+++|||++|++++. |.   +  +.|.++|||++|+|+++|++|++|++||||+..     .++...+...++..|+++
T Consensus       245 V~a~gin~~D~~~~~-G~---~--~~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~~G~~ae~~~v~~~~~~~iP~~l  318 (795)
T 3slk_A          245 MRAAGVNFRDALIAL-GM---Y--PGVASLGSEGAGVVVETGPGVTGLAPGDRVMGMIPKAFGPLAVADHRMVTRIPAGW  318 (795)
T ss_dssp             EEEEEECHHHHHHTT-TC---C--SSCCCSCCCEEEEEEEECSSCCSSCTTCEEEECCSSCSSSEEEEETTSEEECCTTC
T ss_pred             EEEEccCHHHHHHHc-CC---C--CCCccccceeEEEEEEeCCCCCcCCCCCEEEEEecCCCcCEEEeehHHEEECCCCC
Confidence            579999999999884 32   2  346679999999999999999999999999854     355677788899999999


Q ss_pred             eecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc--------------------------
Q psy1413          76 RFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE--------------------------  127 (408)
Q Consensus        76 ~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~--------------------------  127 (408)
                      ++++.+.+|..+.+++.+......+ .|++|+|+| +|++|++++|+++.+|++                          
T Consensus       319 s~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k~~~l~lga~~v~~~~~~  398 (795)
T 3slk_A          319 SFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSREHLASSRTC  398 (795)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGGGGGSCSCGGGEECSSSS
T ss_pred             CHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHHhhhhhcChhheeecCCh
Confidence            9988888887777777554444444 589999999 599999999999988763                          


Q ss_pred             --------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecC-------CCc
Q psy1413         128 --------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY-------AND  184 (408)
Q Consensus       128 --------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~-------~~~  184 (408)
                                    ++.+++++|...  +++++++++|+++.+|.........+. ...+++++.+....       .+.
T Consensus       399 ~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~  477 (795)
T 3slk_A          399 DFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDPVEVA-DAHPGVSYQAFDTVEAGPQRIGEM  477 (795)
T ss_dssp             THHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEEEEECCSTTCCCHHHHH-HHSSSEEEEECCGGGGHHHHHHHH
T ss_pred             hHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCEEEEeccccccCccccc-ccCCCCEEEEeeccccCHHHHHHH
Confidence                          445566655432  689999999999999976654333322 23477777765421       145


Q ss_pred             HHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceeecCCCcccccccccCCccccccceeec
Q psy1413         185 YPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC  264 (408)
Q Consensus       185 ~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (408)
                      ++++++++++|++++  +++++|||+|+++||+.+.+++. .+|++++..                              
T Consensus       478 l~~~~~l~~~g~l~p--~~~~~~~l~~~~eA~~~l~~g~~-~GKvVl~~~------------------------------  524 (795)
T 3slk_A          478 LHELVELFEGRVLEP--LPVTAWDVRQAPEALRHLSQARH-VGKLVLTMP------------------------------  524 (795)
T ss_dssp             HHHHHHHHHTTSCCC--CCEEEEEGGGHHHHHHHHHHTCC-CBEEEEECC------------------------------
T ss_pred             HHHHHHHHHcCCcCC--CcceeEcHHHHHHHHHHHhcCCc-cceEEEecC------------------------------
Confidence            889999999999864  68999999999999999988754 345555421                              


Q ss_pred             ccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHH-HhCCC
Q psy1413         265 ATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTAR-ALGAS  342 (408)
Q Consensus       265 ~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~-~~Ga~  342 (408)
                                              +                       .++++++|||+|+ |++|+.+++++. ..|++
T Consensus       525 ------------------------~-----------------------~~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~  557 (795)
T 3slk_A          525 ------------------------P-----------------------VWDAAGTVLVTGGTGALGAEVARHLVIERGVR  557 (795)
T ss_dssp             ------------------------C-----------------------CCCTTSEEEEETTTSHHHHHHHHHHHHTSSCC
T ss_pred             ------------------------c-----------------------ccccccceeeccCCCCcHHHHHHHHHHHcCCc
Confidence                                    1                       1478899999999 999999999998 79999


Q ss_pred             eEEEEecChh---h----HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         343 RVVITDILEH---K----LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       343 ~vv~~~~~~~---~----~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +|++++|++.   +    .+.+++.|+...+...|..+.+++++.+.++....++|.+|++.|..
T Consensus       558 ~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id~lVnnAGv~  622 (795)
T 3slk_A          558 NLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLTAVVHAAGVL  622 (795)
T ss_dssp             EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCC
T ss_pred             EEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCEEEEECCCcC
Confidence            9999999832   2    23445678877777778888899999988876545899999999864

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=99.97  E-value=1.9e-31  Score=254.93  Aligned_cols=135  Identities=24%  Similarity=0.309  Sum_probs=122.6

Q ss_pred             CCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEE
Q psy1413         269 DHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       269 ~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      .+|+|++|+.++++.++++|+++++++++.++ ...|++++++...+++++++||+|+|++|+.++|+++.+|+.+|+++
T Consensus       115 ~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~  194 (348)
T 4eez_A          115 VDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV  194 (348)
T ss_dssp             BCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEE
T ss_pred             cCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEE
Confidence            47999999999999999999999999998887 56678888888899999999999999999999999998877779999


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +++++|++.++++|+++++|+++    ++..+.+++++++.++|.+++++++..+++.++
T Consensus       195 ~~~~~r~~~~~~~Ga~~~i~~~~----~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~  250 (348)
T 4eez_A          195 DINQDKLNLAKKIGADVTINSGD----VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAV  250 (348)
T ss_dssp             ESCHHHHHHHHHTTCSEEEEC-C----CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHH
T ss_pred             ECcHHHhhhhhhcCCeEEEeCCC----CCHHHHhhhhcCCCCceEEEEeccCcchhheeh
Confidence            99999999999999999999988    788899999999999999999999998877654

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=99.97  E-value=1.9e-31  Score=255.63  Aligned_cols=249  Identities=58%  Similarity=1.011  Sum_probs=210.0

Q ss_pred             cceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhcc
Q psy1413          67 PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATR  146 (408)
Q Consensus        67 ~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~  146 (408)
                      .++..|+.+.+ ++.+.|.+.+.++++.+.++++++.++.+...+..+......+..+|+|+.|+|..+|+..+.++.  
T Consensus        11 ~~~~~~~~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~~~v--   87 (356)
T 1pl8_A           11 LVVHGPGDLRL-ENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKP--   87 (356)
T ss_dssp             EEEEETTEEEE-EECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCCT--
T ss_pred             EEEecCCcEEE-EEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCCCCC--
Confidence            34455677777 667788888999999999999998876654222222222345678999999999999976544444  


Q ss_pred             CCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCc
Q psy1413         147 PGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNA  226 (408)
Q Consensus       147 ~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~  226 (408)
                                                                                                      
T Consensus        88 --------------------------------------------------------------------------------   87 (356)
T 1pl8_A           88 --------------------------------------------------------------------------------   87 (356)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhh
Q psy1413         227 IKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGV  306 (408)
Q Consensus       227 ~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~  306 (408)
                            +|+|...+..+|+.|.+|.+|++++|++..++|....+|+|++|+.++++.++++|+++++++|+++.++.+++
T Consensus        88 ------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~~~~~ta~  161 (356)
T 1pl8_A           88 ------GDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGI  161 (356)
T ss_dssp             ------TCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             ------CCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhhchHHHHH
Confidence                  99999999999999999999999999998888765568999999999999999999999999999877888999


Q ss_pred             hhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         307 HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       307 ~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      +++++..+++++++||+|+|++|++++|+++.+|+++|++++++++|++.++++|+++++++++ .+.++..+.+++.++
T Consensus       162 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-~~~~~~~~~i~~~~~  240 (356)
T 1pl8_A          162 HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK-ESPQEIARKVEGQLG  240 (356)
T ss_dssp             HHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSS-CCHHHHHHHHHHHHT
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcc-cccchHHHHHHHHhC
Confidence            9998889999999999999999999999999999977999999999999999999999999862 112677888888886


Q ss_pred             CCCCceEEEcccchhhhhhc
Q psy1413         387 GEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       387 ~~~~d~i~d~~g~~~~~~~~  406 (408)
                       +++|++||++|+..+++.+
T Consensus       241 -~g~D~vid~~g~~~~~~~~  259 (356)
T 1pl8_A          241 -CKPEVTIECTGAEASIQAG  259 (356)
T ss_dssp             -SCCSEEEECSCCHHHHHHH
T ss_pred             -CCCCEEEECCCChHHHHHH
Confidence             7899999999988666554

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=99.97  E-value=3.4e-32  Score=261.57  Aligned_cols=231  Identities=29%  Similarity=0.478  Sum_probs=183.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++|||++|++.+.++..+..+.++|.++|||++|+|+++|++|++|++||||++.+...                   
T Consensus        47 v~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~  126 (363)
T 3m6i_A           47 VRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVD  126 (363)
T ss_dssp             EEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCE
T ss_pred             EeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCcc
Confidence            5799999999999876654555567899999999999999999999999999999764322                   


Q ss_pred             ---------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          62 ---------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        62 ---------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                     ..+...++..|+ +++++++.+ .++.+++.+. ....+ .|++|+|+|+|++|++++|+++.+|
T Consensus       127 ~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G  203 (363)
T 3m6i_A          127 FLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML-EPLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAG  203 (363)
T ss_dssp             ETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTT
T ss_pred             ccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                           222334445555 555333322 2333333221 12222 4889999999999999999998777


Q ss_pred             Cc-----------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEc
Q psy1413         126 HE-----------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVG  155 (408)
Q Consensus       126 ~~-----------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G  155 (408)
                      +.                                               ++.+++++|..   .+++++++++|+++.+|
T Consensus       204 a~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G  283 (363)
T 3m6i_A          204 ACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIG  283 (363)
T ss_dssp             CCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEc
Confidence            52                                               34556666654   26899999999999999


Q ss_pred             cCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         156 AGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      .......++...+++|++++.+++.+.++++++++++++|+++++++++++|||+|+++||+.+.+++...+|++++.+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  362 (363)
T 3m6i_A          284 VGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSL  362 (363)
T ss_dssp             CCCSCCCCCHHHHHHHTCEEEECCSCSSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC
T ss_pred             cCCCCccccHHHHHhcCcEEEEccCCHHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecC
Confidence            9887788899999999999999988888999999999999999999999999999999999999998778899998865

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=99.97  E-value=1.6e-31  Score=256.78  Aligned_cols=249  Identities=44%  Similarity=0.718  Sum_probs=216.3

Q ss_pred             cceeccceeeecccccCC--------CCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCch
Q psy1413          67 PILRRRFSLRFREQKPIE--------DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK  138 (408)
Q Consensus        67 ~~~~~p~~~~~~~~~~lp--------~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~  138 (408)
                      .++..|+.+.+ +..++|        .+.+.++++.+.++++++.++.+...|..|......+..+|+|+.|+|..+|+.
T Consensus        12 ~~~~~~~~l~~-~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~   90 (363)
T 3m6i_A           12 VFTNPQHDLWI-SEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPS   90 (363)
T ss_dssp             EEECTTCCEEE-EECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTT
T ss_pred             EEEeCCCcEEE-EEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEEEEECCC
Confidence            44566777888 678888        888999999999999998887665334344444567788999999999999976


Q ss_pred             HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHH
Q psy1413         139 VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFET  218 (408)
Q Consensus       139 ~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~  218 (408)
                      .+.++.                                                                          
T Consensus        91 v~~~~v--------------------------------------------------------------------------   96 (363)
T 3m6i_A           91 VKSIKV--------------------------------------------------------------------------   96 (363)
T ss_dssp             CCSCCT--------------------------------------------------------------------------
T ss_pred             CCCCCC--------------------------------------------------------------------------
Confidence            554554                                                                          


Q ss_pred             HHcCCCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccc
Q psy1413         219 AKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGAL  298 (408)
Q Consensus       219 ~~~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~  298 (408)
                                    +|+|...+..+|+.|.+|..|.++.|.+..+.+....+|+|++|+.++++.++++|+ +++++|++
T Consensus        97 --------------GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~  161 (363)
T 3m6i_A           97 --------------GDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAM  161 (363)
T ss_dssp             --------------TCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHH
T ss_pred             --------------CCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHh
Confidence                          999999999999999999999999999999888877899999999999999999999 99999998


Q ss_pred             cchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC-CCChHHH
Q psy1413         299 LEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR-NHSLEEI  377 (408)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~-~~~~~~~  377 (408)
                      +.+++|+|+++++..+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++ ++.++++.. ..+.+++
T Consensus       162 ~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~  240 (363)
T 3m6i_A          162 LEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEES  240 (363)
T ss_dssp             HHHHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHH
T ss_pred             hhHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHH
Confidence            88889999999889999999999999999999999999999998899999999999999999 777776642 2345889


Q ss_pred             HHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         378 STHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       378 ~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      .+.++++++++++|++|||+|++.+++.+
T Consensus       241 ~~~v~~~t~g~g~Dvvid~~g~~~~~~~~  269 (363)
T 3m6i_A          241 AKKIVESFGGIEPAVALECTGVESSIAAA  269 (363)
T ss_dssp             HHHHHHHTSSCCCSEEEECSCCHHHHHHH
T ss_pred             HHHHHHHhCCCCCCEEEECCCChHHHHHH
Confidence            99999999889999999999998776654

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=99.97  E-value=4.9e-32  Score=260.75  Aligned_cols=230  Identities=23%  Similarity=0.361  Sum_probs=181.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      |+++|||++|++.+. |   .++.++|.++|||++|+|+++|++|++|++||||++.+..                    
T Consensus        54 v~a~gi~~~D~~~~~-G---~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~  129 (370)
T 4ej6_A           54 VEACGICGTDRHLLH-G---EFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLR  129 (370)
T ss_dssp             EEEEECCHHHHHHHT-T---SSCCCSSEECCCSEEEEEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCE
T ss_pred             EEEEeecHHHHHHHc-C---CCCCCCCeecCcceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCcc
Confidence            579999999999985 3   3456789999999999999999999999999999875432                    


Q ss_pred             -------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC
Q psy1413          61 -------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        61 -------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                                   ...+...++..|+++++ +.++++.++.+++.+. ....+ .+++|+|+|+|++|++++|+++.+|+
T Consensus       130 ~~g~~~~G~~aey~~v~~~~~~~~P~~~~~-~~aal~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga  207 (370)
T 4ej6_A          130 AIGIHRDGGFAEYVLVPRKQAFEIPLTLDP-VHGAFCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGA  207 (370)
T ss_dssp             EBTTTBCCSSBSEEEEEGGGEEEECTTSCT-TGGGGHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred             ccCCCCCCcceEEEEEchhhEEECCCCCCH-HHHhhhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                         22333344555666666 3333443433333211 12222 48899999999999999999887775


Q ss_pred             ---------------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCC
Q psy1413         127 ---------------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGS  158 (408)
Q Consensus       127 ---------------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~  158 (408)
                                                                   .++.+++++|...   +++++++++|+++.+|...
T Consensus       208 ~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~  287 (370)
T 4ej6_A          208 TTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLP  287 (370)
T ss_dssp             SEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCC
T ss_pred             CEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccC
Confidence                                                         1466788888542   6899999999999999776


Q ss_pred             C--CcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCce
Q psy1413         159 Q--DVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRV  236 (408)
Q Consensus       159 ~--~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v  236 (408)
                      .  +.+++...+++|++++.|++..+.+++++++++++|+++++++++++|||+|+++||+.+.+++...+|+++++.++
T Consensus       288 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~i  367 (370)
T 4ej6_A          288 QGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAERV  367 (370)
T ss_dssp             TTCCCCCCHHHHHHTTCEEEECCSCTTCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC----
T ss_pred             CCCccccCHHHHHhCCcEEEEeccChHHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEccccc
Confidence            5  67888999999999999999888899999999999999999999999999999999999999887888999887765

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=99.97  E-value=8.1e-31  Score=250.36  Aligned_cols=242  Identities=30%  Similarity=0.470  Sum_probs=212.5

Q ss_pred             ceeccceeeecccccCCC-CCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhcc
Q psy1413          68 ILRRRFSLRFREQKPIED-PDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATR  146 (408)
Q Consensus        68 ~~~~p~~~~~~~~~~lp~-~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~  146 (408)
                      ++..+..+.+ ++.++|+ +.++++++.+.++++|+.++..+-    |.....++..+|+|+.|+|+.+|+..+.++.  
T Consensus         5 v~~~~g~l~v-~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~----g~~~~~~P~i~G~E~~G~V~~vG~~V~~~~~--   77 (346)
T 4a2c_A            5 VNDTDGIVRV-AESVIPEIKHQDEVRVKIASSGLCGSDLPRIF----KNGAHYYPITLGHEFSGYIDAVGSGVDDLHP--   77 (346)
T ss_dssp             EECSSSCEEE-EECCCCCCCSTTEEEEEEEEEECCTTHHHHHH----SSCSSSSSBCCCCEEEEEEEEECTTCCSCCT--
T ss_pred             EEecCCCEEE-EEEeCCCCCCcCEEEEEEEEEEECHHHHHHHc----CCCCCCCCccccEEEEEEEEEECCCcccccC--
Confidence            4455667788 7788997 568899999999999998875532    1122356778999999999999986555554  


Q ss_pred             CCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCc
Q psy1413         147 PGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNA  226 (408)
Q Consensus       147 ~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~  226 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (346)
T 4a2c_A           78 --------------------------------------------------------------------------------   77 (346)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhh
Q psy1413         227 IKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGV  306 (408)
Q Consensus       227 ~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~  306 (408)
                            +|+|...+...|+.|..|..|.+++|.+..++|.. .+|+|+||+.++++.++++|++++++++|+++++++++
T Consensus        78 ------GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~~~  150 (346)
T 4a2c_A           78 ------GDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSR-RDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL  150 (346)
T ss_dssp             ------TCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTT-BCCSSBSEEEEEGGGEEECCTTSCGGGGGGHHHHHHHH
T ss_pred             ------CCeEEeeeccCCCCcccccCCccccCCCcccccCC-CCcccccccccchheEEECCCCCCHHHHHhchHHHHHH
Confidence                  89999999999999999999999999999888864 68999999999999999999999999999988888888


Q ss_pred             hhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         307 HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       307 ~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      +.......++++++||+|+|++|++++|+++++|++.+++++++++|++.++++|+++++|+++    .+..+.++++++
T Consensus       151 ~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~----~~~~~~~~~~~~  226 (346)
T 4a2c_A          151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE----MSAPQMQSVLRE  226 (346)
T ss_dssp             HHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT----SCHHHHHHHHGG
T ss_pred             HHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC----CCHHHHHHhhcc
Confidence            8888899999999999999999999999999999998899999999999999999999999988    777888889998


Q ss_pred             CCCCceEEEcccchhhhhhcC
Q psy1413         387 GEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       387 ~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      ++++|++||++|++.+++.++
T Consensus       227 ~~g~d~v~d~~G~~~~~~~~~  247 (346)
T 4a2c_A          227 LRFNQLILETAGVPQTVELAV  247 (346)
T ss_dssp             GCSSEEEEECSCSHHHHHHHH
T ss_pred             cCCcccccccccccchhhhhh
Confidence            999999999999988877654

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=99.97  E-value=1.2e-30  Score=250.41  Aligned_cols=153  Identities=23%  Similarity=0.335  Sum_probs=124.8

Q ss_pred             ccccccccCCccccccce-eec------ccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcC
Q psy1413         244 CRTCTYCKEGRYNLCRQI-FFC------ATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVT  315 (408)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~-~~~------~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~  315 (408)
                      |+.|.+|++|++++|++. ..+      |. ..+|+|++|+.++++.++++|+++++++++.++ .+.|+|+++.+..++
T Consensus       100 cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~  178 (360)
T 1piw_A          100 CLECDRCKNDNEPYCTKFVTTYSQPYEDGY-VSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCG  178 (360)
T ss_dssp             CSCSHHHHTTCGGGCTTCEESSSCBCTTSC-BCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHHTTCS
T ss_pred             CCCChhhcCCCcccCcchhhccccccCCCc-cCCCcceeEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHcCCC
Confidence            455666666777777654 222      21 246999999999999999999999999988777 677889999778999


Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChH-HHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLE-EISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~-~~~~~~~~~~~~~~~d~i~  394 (408)
                      +++++||+|+|++|+.++|+++.+|++ |+++++++++++.++++|+++++++++    + ++.+.+.     +++|++|
T Consensus       179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~-Vi~~~~~~~~~~~~~~lGa~~v~~~~~----~~~~~~~~~-----~~~D~vi  248 (360)
T 1piw_A          179 PGKKVGIVGLGGIGSMGTLISKAMGAE-TYVISRSSRKREDAMKMGADHYIATLE----EGDWGEKYF-----DTFDLIV  248 (360)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCE-EEEEESSSTTHHHHHHHTCSEEEEGGG----TSCHHHHSC-----SCEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHcCCCEEEcCcC----chHHHHHhh-----cCCCEEE
Confidence            999999999999999999999999997 999999999999999999999999875    3 4433332     4899999


Q ss_pred             Ecccc--hhhhhhcC
Q psy1413         395 DCSGI--ESTIKLGM  407 (408)
Q Consensus       395 d~~g~--~~~~~~~~  407 (408)
                      |++|+  ..+++.++
T Consensus       249 d~~g~~~~~~~~~~~  263 (360)
T 1piw_A          249 VCASSLTDIDFNIMP  263 (360)
T ss_dssp             ECCSCSTTCCTTTGG
T ss_pred             ECCCCCcHHHHHHHH
Confidence            99998  66555543

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=99.97  E-value=3.8e-31  Score=254.55  Aligned_cols=243  Identities=31%  Similarity=0.564  Sum_probs=211.2

Q ss_pred             CcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhc
Q psy1413          66 SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKAT  145 (408)
Q Consensus        66 ~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l  145 (408)
                      ..++..+..+.+ +..++|.+.+.++++.+.++++++.++.+..    |......+..+|.|+.|+|..+|+..+.++. 
T Consensus        26 A~v~~~~~~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~----G~~~~~~p~v~G~e~~G~V~~vG~~v~~~~v-   99 (370)
T 4ej6_A           26 AVRLESVGNISV-RNVGIPEPGPDDLLVKVEACGICGTDRHLLH----GEFPSTPPVTLGHEFCGIVVEAGSAVRDIAP-   99 (370)
T ss_dssp             EEEEEETTEEEE-EEEECCCCCTTEEEEEEEEEECCHHHHHHHT----TSSCCCSSEECCCSEEEEEEEECTTCCSSCT-
T ss_pred             EEEEecCCceEE-EEccCCCCCCCeEEEEEEEEeecHHHHHHHc----CCCCCCCCeecCcceEEEEEEECCCCCCCCC-
Confidence            344556677777 6788898899999999999999988776543    2223456778999999999999976544544 


Q ss_pred             cCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCC
Q psy1413         146 RPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGN  225 (408)
Q Consensus       146 ~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~  225 (408)
                                                                                                      
T Consensus       100 --------------------------------------------------------------------------------   99 (370)
T 4ej6_A          100 --------------------------------------------------------------------------------   99 (370)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhh
Q psy1413         226 AIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVG  305 (408)
Q Consensus       226 ~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~  305 (408)
                             +|+|...+..+|+.|.+|.+|+++.|.+...+|.. .+|+|++|+.++++.++++|++++++++++..++.++
T Consensus       100 -------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~-~~G~~aey~~v~~~~~~~~P~~~~~~~aal~~~~~ta  171 (370)
T 4ej6_A          100 -------GARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIH-RDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACC  171 (370)
T ss_dssp             -------TCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTT-BCCSSBSEEEEEGGGEEEECTTSCTTGGGGHHHHHHH
T ss_pred             -------CCEEEECCCCCCCCChHHhCcCcccCCCccccCCC-CCCcceEEEEEchhhEEECCCCCCHHHHhhhhHHHHH
Confidence                   99999999999999999999999999999888875 6899999999999999999999999999977789999


Q ss_pred             hhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH--
Q psy1413         306 VHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE--  383 (408)
Q Consensus       306 ~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~--  383 (408)
                      +++++...+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++.++|+++    +++.+.+++  
T Consensus       172 ~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~----~~~~~~i~~~~  247 (370)
T 4ej6_A          172 LHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA----GDVVEAIAGPV  247 (370)
T ss_dssp             HHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTS----SCHHHHHHSTT
T ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCC----cCHHHHHHhhh
Confidence            99998899999999999999999999999999999977999999999999999999999999877    678888887  


Q ss_pred             -HhcCCCCceEEEcccchhhhhhcC
Q psy1413         384 -LLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       384 -~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                       ++++ ++|++|||+|+..+++.++
T Consensus       248 ~~~~g-g~Dvvid~~G~~~~~~~~~  271 (370)
T 4ej6_A          248 GLVPG-GVDVVIECAGVAETVKQST  271 (370)
T ss_dssp             SSSTT-CEEEEEECSCCHHHHHHHH
T ss_pred             hccCC-CCCEEEECCCCHHHHHHHH
Confidence             6766 9999999999877766543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=99.97  E-value=1.4e-31  Score=255.58  Aligned_cols=226  Identities=21%  Similarity=0.282  Sum_probs=171.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      |+++|||++|++.+.+    ..+..+|+++|||++|+|+++|++|+++++||||.+.+..                    
T Consensus        32 v~a~gi~~sD~~~~~g----~~~~~~P~i~G~E~~G~V~~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~  107 (346)
T 4a2c_A           32 IASSGLCGSDLPRIFK----NGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYD  107 (346)
T ss_dssp             EEEEECCTTHHHHHHS----SCSSSSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCE
T ss_pred             EEEEEECHHHHHHHcC----CCCCCCCccccEEEEEEEEEECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcc
Confidence            5799999999998853    3445789999999999999999999999999999875422                    


Q ss_pred             -------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC-
Q psy1413          61 -------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH-  126 (408)
Q Consensus        61 -------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~-  126 (408)
                                   ...+.+.++..|+++++++++.++ +....+..........+++|+|+|+|++|++++|+++.+|+ 
T Consensus       108 ~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~  186 (346)
T 4a2c_A          108 FIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAK  186 (346)
T ss_dssp             EBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHHHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCS
T ss_pred             cccCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHHHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCc
Confidence                         223334555566666664333322 21111111111111258999999999999999999988775 


Q ss_pred             ------------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCCCc
Q psy1413         127 ------------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDV  161 (408)
Q Consensus       127 ------------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~  161 (408)
                                                                ..+.+++++|...   +++++++++|+++.+|....+.
T Consensus       187 ~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~  266 (346)
T 4a2c_A          187 SVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDL  266 (346)
T ss_dssp             EEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCE
T ss_pred             EEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCc
Confidence                                                      2456777887543   6799999999999999887664


Q ss_pred             c---cCHHHHHhcCcEEEEeecCC------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         162 K---IPLVLTMTKEIDIRGVFRYA------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       162 ~---~~~~~~~~~~~~l~g~~~~~------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .   +++..++.|++++.|++...      ++++++++|+++|+++++++|+|+|||+|+++||+.+.+++. .+|+++.
T Consensus       267 ~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~-~GKvVl~  345 (346)
T 4a2c_A          267 HLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAM-PGKVLLI  345 (346)
T ss_dssp             EECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCC-CSEEEEC
T ss_pred             cccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCC-ceEEEEE
Confidence            4   34557889999999987431      468999999999999999999999999999999999988765 4577765

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=5.1e-31  Score=252.25  Aligned_cols=247  Identities=64%  Similarity=1.113  Sum_probs=207.0

Q ss_pred             cceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhcc
Q psy1413          67 PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATR  146 (408)
Q Consensus        67 ~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~  146 (408)
                      .++..|+.+.+ +..++|.+.+.++++.+.++++++.++.+...|..+......+..+|+|+.|+|..+|+..+.++.  
T Consensus         8 ~~~~~~~~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v--   84 (352)
T 1e3j_A            8 AVLYKQNDLRL-EQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK--   84 (352)
T ss_dssp             EEEEETTEEEE-EECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCT--
T ss_pred             EEEEcCCcEEE-EEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCCCCC--
Confidence            34455677777 667888888999999999999998877654222222222345778999999999999976444444  


Q ss_pred             CCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCc
Q psy1413         147 PGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNA  226 (408)
Q Consensus       147 ~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~  226 (408)
                                                                                                      
T Consensus        85 --------------------------------------------------------------------------------   84 (352)
T 1e3j_A           85 --------------------------------------------------------------------------------   84 (352)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhh
Q psy1413         227 IKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGV  306 (408)
Q Consensus       227 ~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~  306 (408)
                            +|+|...+..+|+.|.+|.+|++++|++..+.|....+|+|++|+.++++.++++|+++++++|+++.+++++|
T Consensus        85 ------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~  158 (352)
T 1e3j_A           85 ------GDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV  158 (352)
T ss_dssp             ------TCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTHHHHHHHH
T ss_pred             ------CCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhhchHHHHH
Confidence                  99999999899999999999999999998888876568999999999999999999999999999887888999


Q ss_pred             hhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         307 HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       307 ~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      ++++...+++++++||+|+|++|++++|+++.+|++ |+++++++++++.++++|++.++++++   .++..+.+++.+.
T Consensus       159 ~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~~~~~~~---~~~~~~~i~~~~~  234 (352)
T 1e3j_A          159 HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDP---AKEEESSIIERIR  234 (352)
T ss_dssp             HHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTCSEEEECCT---TTSCHHHHHHHHH
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCcc---cccHHHHHHHHhc
Confidence            999888999999999999999999999999999998 999999999999999999999999863   1344556667775


Q ss_pred             ---CCCCceEEEcccchhhhhhc
Q psy1413         387 ---GEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       387 ---~~~~d~i~d~~g~~~~~~~~  406 (408)
                         ++++|++||++|+..+++.+
T Consensus       235 ~~~g~g~D~vid~~g~~~~~~~~  257 (352)
T 1e3j_A          235 SAIGDLPNVTIDCSGNEKCITIG  257 (352)
T ss_dssp             HHSSSCCSEEEECSCCHHHHHHH
T ss_pred             cccCCCCCEEEECCCCHHHHHHH
Confidence               67899999999988666554

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=99.97  E-value=4.6e-31  Score=252.53  Aligned_cols=232  Identities=43%  Similarity=0.674  Sum_probs=177.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++|||++|++.+.++..+.+..++|.++|||++|+|+++|++|++|++||||++.+...                   
T Consensus        35 v~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~  114 (352)
T 1e3j_A           35 MAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLT  114 (352)
T ss_dssp             EEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCE
T ss_pred             EEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCc
Confidence            5799999999998865543333346799999999999999999999999999998764321                   


Q ss_pred             ---------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          62 ---------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        62 ---------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                     ..+...++..|+++++++++ +..++.+++.+. ....+ .+++|+|+|+|++|++++|+++.+|
T Consensus       115 ~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa-~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G  192 (352)
T 1e3j_A          115 FCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGA-LLEPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG  192 (352)
T ss_dssp             ETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHH-THHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred             ccCcCCCCccceeEEEeChHHeEECcCCCCHHHHH-hhchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                           12223344455555553222 222332332211 11222 4789999999999999998887666


Q ss_pred             C----------------------------------------------cceeEEEccCch---HHHHhhccCCcEEEEEcc
Q psy1413         126 H----------------------------------------------EASGIVSKVGAK---VKHLKATRPGGCLVIVGA  156 (408)
Q Consensus       126 ~----------------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~  156 (408)
                      +                                              .++.+++++|..   .+++++++++|+++.+|.
T Consensus       193 a~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~  272 (352)
T 1e3j_A          193 AFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGM  272 (352)
T ss_dssp             CEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred             CEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEec
Confidence            4                                              134566677654   267999999999999998


Q ss_pred             CCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         157 GSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ...+.+++...+++|++++.|++.+..+++++++++++|+++++++++++|||+|+++||+.+.+++...+|+++++.
T Consensus       273 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  350 (352)
T 1e3j_A          273 GSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR  350 (352)
T ss_dssp             CSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECC
T ss_pred             CCCCccccHHHHHhcCcEEEEeccchHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecC
Confidence            766677888899999999999988788899999999999999999999999999999999999988656788888754

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=99.97  E-value=3.3e-31  Score=253.90  Aligned_cols=230  Identities=40%  Similarity=0.657  Sum_probs=174.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------   62 (408)
                      |+++|||++|++.+.++..+.+..++|.++|||++|+|+++|++|++|++||||++.+...|                  
T Consensus        38 v~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~  117 (356)
T 1pl8_A           38 MHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIF  117 (356)
T ss_dssp             EEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCE
T ss_pred             EEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCcc
Confidence            46999999999988644333233467999999999999999999999999999997653221                  


Q ss_pred             ----------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          63 ----------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        63 ----------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                      .+...++..|+++++++++ +..++.+++.+. ....+ .+++|+|+|+|++|++++|+++.+|
T Consensus       118 ~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa-~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G  195 (356)
T 1pl8_A          118 FCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGA-LIEPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMG  195 (356)
T ss_dssp             ETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHH-HHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred             ccCcCCCCCccccEEEeehHHEEECcCCCCHHHHH-hhchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                            1222334444444442222 222222222111 11222 4789999999999999999888766


Q ss_pred             C---------------------------c------------------ceeEEEccCch---HHHHhhccCCcEEEEEccC
Q psy1413         126 H---------------------------E------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAG  157 (408)
Q Consensus       126 ~---------------------------~------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~  157 (408)
                      +                           .                  ++.+++++|..   .+++++++++|+++.+|..
T Consensus       196 a~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~  275 (356)
T 1pl8_A          196 AAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLG  275 (356)
T ss_dssp             CSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCC
T ss_pred             CCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecC
Confidence            4                           1                  34456666654   2679999999999999987


Q ss_pred             CCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         158 SQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       158 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ..+..++...+++|++++.|++.+..+++++++++++|+++++++++++|||+|+++||+.+.++  ..+|++++.+
T Consensus       276 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~--~~gKvvi~~~  350 (356)
T 1pl8_A          276 SEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG--LGLKIMLKCD  350 (356)
T ss_dssp             CSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT--CCSEEEEECC
T ss_pred             CCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC--CceEEEEeCC
Confidence            66678888899999999999988778899999999999999999999999999999999999887  6788888764

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=99.97  E-value=2.1e-30  Score=247.60  Aligned_cols=243  Identities=27%  Similarity=0.503  Sum_probs=193.0

Q ss_pred             eeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          69 LRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        69 ~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      +..+. .+.+ ++.++|.+.+.++++.+.++++++.++.+.............+..+|.|+.|+|..+|+..+.++.   
T Consensus        10 ~~~~g~~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v---   85 (348)
T 2d8a_A           10 KTKPGYGAEL-VEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEV---   85 (348)
T ss_dssp             ECSSSSSCEE-EEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCSCCT---
T ss_pred             EECCCCCEEE-EECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCcCCC---
Confidence            33444 5566 567788888899999999999998877654210111012346678999999999999976444444   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        86 --------------------------------------------------------------------------------   85 (348)
T 2d8a_A           86 --------------------------------------------------------------------------------   85 (348)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhh
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVH  307 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~  307 (408)
                           +|+|...+..+|++|.+|.+|++++|++..++|. ..+|+|++|+.++++.++++|+++++++|+++++++|+++
T Consensus        86 -----GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~  159 (348)
T 2d8a_A           86 -----GDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVD  159 (348)
T ss_dssp             -----TCEEEECCEECCSCCC------------CEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHHHHHHHHH
T ss_pred             -----CCEEEEcCCCCCCCChhhhCcCcccCCCCCeecC-CCCCcCcceEEeChHHeEECCCCCCHHHHHhhhHHHHHHH
Confidence                 9999999989999999999999999998887775 3679999999999999999999999999998888889999


Q ss_pred             hhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       308 ~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      ++++..+ +++++||+|+|++|++++|+++.+|+++|+++++++++++.++++|+++++++++    +++.+.+++++++
T Consensus       160 ~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~----~~~~~~v~~~~~g  234 (348)
T 2d8a_A          160 TVLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE----EDVVKEVMDITDG  234 (348)
T ss_dssp             HHTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTT----SCHHHHHHHHTTT
T ss_pred             HHHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCC----cCHHHHHHHHcCC
Confidence            9988888 9999999999999999999999999955999999999999999999999999876    6788889999888


Q ss_pred             CCCceEEEcccchhhhhhc
Q psy1413         388 EQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       388 ~~~d~i~d~~g~~~~~~~~  406 (408)
                      +++|++||++|....++.+
T Consensus       235 ~g~D~vid~~g~~~~~~~~  253 (348)
T 2d8a_A          235 NGVDVFLEFSGAPKALEQG  253 (348)
T ss_dssp             SCEEEEEECSCCHHHHHHH
T ss_pred             CCCCEEEECCCCHHHHHHH
Confidence            8999999999986665544

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=99.96  E-value=5.7e-31  Score=251.88  Aligned_cols=229  Identities=21%  Similarity=0.228  Sum_probs=178.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++|||++|++.+..|.   .+.++|.++|||++|+|+++|++|++|++||||++.+...                   
T Consensus        31 v~a~gi~~~D~~~~~~g~---~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~  107 (352)
T 3fpc_A           31 PLAVAPCTSDIHTVFEGA---IGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGML  107 (352)
T ss_dssp             EEEEECCHHHHHHHHSCT---TCCCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTT
T ss_pred             eCEEeEcccchHHHhCCC---CCCCCCcccCCcceEEEEEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccc
Confidence            579999999999543443   3457899999999999999999999999999999754221                   


Q ss_pred             -----------------cccCC--cceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccc
Q psy1413          62 -----------------NVCLS--PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDP  121 (408)
Q Consensus        62 -----------------~~~~~--~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a  121 (408)
                                       ..+..  .++..|+++++++++.++.++.+++.+. ....+ .+++|+|+|+|++|++++|++
T Consensus       108 ~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla  186 (352)
T 3fpc_A          108 AGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGA  186 (352)
T ss_dssp             TTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHH
T ss_pred             cccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence                             12221  4556677777755555555555555332 22222 588999999999999999999


Q ss_pred             ccccC-------------------------------------------cceeEEEccCch---HHHHhhccCCcEEEEEc
Q psy1413         122 MIVGH-------------------------------------------EASGIVSKVGAK---VKHLKATRPGGCLVIVG  155 (408)
Q Consensus       122 ~~~G~-------------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G  155 (408)
                      +.+|+                                           .++.+++++|..   .+++++|+++|+++.+|
T Consensus       187 ~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G  266 (352)
T 3fpc_A          187 NHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVN  266 (352)
T ss_dssp             HTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECC
T ss_pred             HHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEec
Confidence            88775                                           256778888863   27899999999999999


Q ss_pred             cCCCCcccCHH----HHHhcCcEEEEeecCC--CcHHHHHHHHHcCCCCCCCceeeeec-cchHHHHHHHHHcCCCCceE
Q psy1413         156 AGSQDVKIPLV----LTMTKEIDIRGVFRYA--NDYPIALAMVASGKVDVKKLITHNYL-LEDTLHAFETAKTGAGNAIK  228 (408)
Q Consensus       156 ~~~~~~~~~~~----~~~~~~~~l~g~~~~~--~~~~~~~~l~~~g~~~~~~~i~~~~~-l~~~~~a~~~~~~~~~~~~k  228 (408)
                      .......+++.    .+.++++++.+++...  .+++++++++++|+++++++++++|+ |+|+++||+.+.+++...+|
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~K  346 (352)
T 3fpc_A          267 YLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIK  346 (352)
T ss_dssp             CCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSE
T ss_pred             ccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEE
Confidence            87654333332    2457899999988653  67999999999999999999999999 99999999999998888899


Q ss_pred             EEEEc
Q psy1413         229 VMIHC  233 (408)
Q Consensus       229 vvi~~  233 (408)
                      ++++.
T Consensus       347 vvi~~  351 (352)
T 3fpc_A          347 PVVIL  351 (352)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            99875

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=99.96  E-value=2.6e-30  Score=249.65  Aligned_cols=245  Identities=29%  Similarity=0.435  Sum_probs=203.9

Q ss_pred             ceeccce-eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhcc
Q psy1413          68 ILRRRFS-LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATR  146 (408)
Q Consensus        68 ~~~~p~~-~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~  146 (408)
                      ++..+.. +.+ +..++|.+.+.++++.+.++++++.++.++. |.  .....++..+|+|+.|+|+.+|+..+.++.  
T Consensus        13 v~~~~~~~l~~-~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~--~~~~~~P~v~GhE~~G~V~~vG~~v~~~~v--   86 (378)
T 3uko_A           13 VAYEPNKPLVI-EDVQVAPPQAGEVRIKILYTALCHTDAYTWS-GK--DPEGLFPCILGHEAAGIVESVGEGVTEVQA--   86 (378)
T ss_dssp             EBCSTTSCCEE-EEEEECCCCTTEEEEEEEEEEECHHHHHHHT-TC--CTTCCSSBCCCCEEEEEEEEECTTCCSCCT--
T ss_pred             EEecCCCccEE-EEecCCCCCCCeEEEEEEEeecCHHHHHHhc-CC--CCCCCCCccCCccceEEEEEeCCCCCcCCC--
Confidence            3444443 667 6778888889999999999999988876643 21  123456788999999999999976544544  


Q ss_pred             CCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCc
Q psy1413         147 PGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNA  226 (408)
Q Consensus       147 ~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~  226 (408)
                                                                                                      
T Consensus        87 --------------------------------------------------------------------------------   86 (378)
T 3uko_A           87 --------------------------------------------------------------------------------   86 (378)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEEEEcCceeecCCCcccccccccCCccccccceee---cccC------------------CCCccceeEEeeccceee
Q psy1413         227 IKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFF---CATP------------------PDHGNLSRYYRHAADFCH  285 (408)
Q Consensus       227 ~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------~~~g~~~~~~~~~~~~~~  285 (408)
                            +|+|+..+..+|+.|.+|.+|++++|.+...   .|..                  ...|+|++|+.++++.++
T Consensus        87 ------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  160 (378)
T 3uko_A           87 ------GDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVA  160 (378)
T ss_dssp             ------TCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred             ------CCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheE
Confidence                  9999999999999999999999999987543   1111                  123799999999999999


Q ss_pred             eCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCC
Q psy1413         286 KLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGAD  363 (408)
Q Consensus       286 ~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~  363 (408)
                      ++|++++++++++++ ++.|+|+++ +...+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++
T Consensus       161 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~  240 (378)
T 3uko_A          161 KIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN  240 (378)
T ss_dssp             ECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCC
T ss_pred             ECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc
Confidence            999999999999888 677888887 778899999999999999999999999999997799999999999999999999


Q ss_pred             eEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         364 ATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       364 ~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +++|+++  ..+++.+.+++++++ ++|++|||+|++.+++.++
T Consensus       241 ~vi~~~~--~~~~~~~~i~~~~~g-g~D~vid~~g~~~~~~~~~  281 (378)
T 3uko_A          241 EFVNPKD--HDKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAAL  281 (378)
T ss_dssp             EEECGGG--CSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHH
T ss_pred             EEEcccc--CchhHHHHHHHhcCC-CCCEEEECCCCHHHHHHHH
Confidence            9999873  126788899999977 9999999999987776553

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=6.9e-30  Score=244.92  Aligned_cols=237  Identities=25%  Similarity=0.425  Sum_probs=199.7

Q ss_pred             eeeecccccCCC-CCCcceEEEEeeeeecCCeEEEEccCcccc-ccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413          74 SLRFREQKPIED-PDDHEVLLEMHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL  151 (408)
Q Consensus        74 ~~~~~~~~~lp~-~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~-~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i  151 (408)
                      .+.+ ++.+.|. +.+.++++.+.++++++.++.+.. |.... .....+..+|+|+.|+|..+|+..+.++.       
T Consensus        27 ~l~~-~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v-------   97 (359)
T 1h2b_A           27 PLRI-EDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQ-GMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEK-------   97 (359)
T ss_dssp             CCEE-ECCCCCCCBTTBCEEEEEEEEECCHHHHHHHH-TTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCCT-------
T ss_pred             CcEE-EEccCCCCCCCCEEEEEEEEEEecccchHHHh-CCCccccCCCCCeecCcCceEEEEEECCCCCCCCC-------
Confidence            4666 5677888 888999999999999988776542 21110 12246778899999999999976544444       


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                                                                                                      
T Consensus        98 --------------------------------------------------------------------------------   97 (359)
T 1h2b_A           98 --------------------------------------------------------------------------------   97 (359)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCccccc---ccc-hhhhhhh
Q psy1413         232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGA---LLE-PLSVGVH  307 (408)
Q Consensus       232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa---~~~-~~~~~~~  307 (408)
                       +|+|...+..+|+.|.+|++|++++|++...+|. ..+|+|++|+.++++.++++|+++++++|+   ++. ...|+|+
T Consensus        98 -GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~  175 (359)
T 1h2b_A           98 -GDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYR  175 (359)
T ss_dssp             -TCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHH
T ss_pred             -CCEEEeCCCCCCCCChhhhCcCcccCCCcccccc-CCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHHHHHH
Confidence             9999888888999999999999999998877775 357999999999999999999999999988   455 4567888


Q ss_pred             hhhc--cCcCCCCEEEEEecchhHHHHHHHHHHh-CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413         308 ACRR--AGVTLGSKVLITGAGPIGLVTLLTARAL-GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       308 ~~~~--~~~~~~~~~lv~G~G~~G~~~~~~~~~~-Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      ++.+  ..+++++++||+|+|++|+.++|+|+.+ |++ |++++++++|++.++++|+++++|+++    + +.+.++++
T Consensus       176 al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~----~-~~~~v~~~  249 (359)
T 1h2b_A          176 AVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPAT-VIALDVKEEKLKLAERLGADHVVDARR----D-PVKQVMEL  249 (359)
T ss_dssp             HHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCE-EEEEESSHHHHHHHHHTTCSEEEETTS----C-HHHHHHHH
T ss_pred             HHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEEeCCHHHHHHHHHhCCCEEEeccc----h-HHHHHHHH
Confidence            8877  8999999999999999999999999999 996 999999999999999999999999876    5 77888888


Q ss_pred             hcCCCCceEEEcccchh--hhhhcC
Q psy1413         385 LQGEQPDKTIDCSGIES--TIKLGM  407 (408)
Q Consensus       385 ~~~~~~d~i~d~~g~~~--~~~~~~  407 (408)
                      ++++++|++||++|++.  +++.++
T Consensus       250 ~~g~g~Dvvid~~G~~~~~~~~~~~  274 (359)
T 1h2b_A          250 TRGRGVNVAMDFVGSQATVDYTPYL  274 (359)
T ss_dssp             TTTCCEEEEEESSCCHHHHHHGGGG
T ss_pred             hCCCCCcEEEECCCCchHHHHHHHh
Confidence            87779999999999987  777664

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=9e-30  Score=245.89  Aligned_cols=245  Identities=29%  Similarity=0.449  Sum_probs=205.3

Q ss_pred             ceeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHH------
Q psy1413          68 ILRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK------  140 (408)
Q Consensus        68 ~~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~------  140 (408)
                      ++..+. .+.+ ++.++|.+.+.++++.+.++++++.++.+.. |...  ...++..+|.|+.|+|..+| ..+      
T Consensus        22 ~~~~~g~~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~-G~~~--~~~~P~v~GhE~~G~V~~vG-~V~~~~~~~   96 (380)
T 1vj0_A           22 VLEKFNQPLVY-KEFEISDIPRGSILVEILSAGVCGSDVHMFR-GEDP--RVPLPIILGHEGAGRVVEVN-GEKRDLNGE   96 (380)
T ss_dssp             EBCSTTSCCEE-EEEEECCCCTTCEEEEEEEEEECHHHHHHHT-TCCT--TCCSSBCCCCEEEEEEEEES-SCCBCTTSC
T ss_pred             EEecCCCCeEE-EEccCCCCCCCEEEEEEeEEeecccchHHhc-CCCC--CCCCCcccCcCcEEEEEEeC-CccccccCC
Confidence            344454 6666 5677788888999999999999987776542 2211  13456788999999999999 644      


Q ss_pred             HHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHH
Q psy1413         141 HLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAK  220 (408)
Q Consensus       141 ~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~  220 (408)
                      .++.                                                                            
T Consensus        97 ~~~v----------------------------------------------------------------------------  100 (380)
T 1vj0_A           97 LLKP----------------------------------------------------------------------------  100 (380)
T ss_dssp             BCCT----------------------------------------------------------------------------
T ss_pred             CCCC----------------------------------------------------------------------------
Confidence            3444                                                                            


Q ss_pred             cCCCCceEEEEEcCceeecCCCccccccccc-CCccccccceeecccC-------CCCccceeEEee-ccceeeeCCCCC
Q psy1413         221 TGAGNAIKVMIHCDRVAIEPGVPCRTCTYCK-EGRYNLCRQIFFCATP-------PDHGNLSRYYRH-AADFCHKLPDHV  291 (408)
Q Consensus       221 ~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~-~~~~~~~~p~~~  291 (408)
                                  +|+|...+..+|+.|.+|. +|.+++|++..++|..       ..+|+|++|+.+ +++.++++|+++
T Consensus       101 ------------GdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l  168 (380)
T 1vj0_A          101 ------------GDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKD  168 (380)
T ss_dssp             ------------TCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTS
T ss_pred             ------------CCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCC
Confidence                        9999999988999999999 9999999988776641       347999999999 999999999999


Q ss_pred             Ccc-cccccchhhhhhhhhhccC-cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413         292 SLE-EGALLEPLSVGVHACRRAG-VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID  369 (408)
Q Consensus       292 ~~~-~aa~~~~~~~~~~~~~~~~-~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~  369 (408)
                      +++ +|++++++.|+++++++.. +++++++||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++++++++
T Consensus       169 ~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~  248 (380)
T 1vj0_A          169 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR  248 (380)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             ChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEecc
Confidence            999 8888888999999998888 99999999999999999999999999975699999999999999999999999986


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      . .+.+++.+.++++++++++|++|||+|+..+++.+
T Consensus       249 ~-~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~  284 (380)
T 1vj0_A          249 E-TSVEERRKAIMDITHGRGADFILEATGDSRALLEG  284 (380)
T ss_dssp             T-SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHH
T ss_pred             c-cCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHH
Confidence            1 11278888999999878999999999987666554

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=99.96  E-value=4.6e-30  Score=245.59  Aligned_cols=243  Identities=24%  Similarity=0.386  Sum_probs=206.8

Q ss_pred             ceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          68 ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        68 ~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      ++..+..+.+ ++.+.|.+.+.++++.+.++++++.++..+-.|.   .....+..+|+|+.|+|..+|+..+.++.   
T Consensus         5 ~~~~~~~~~~-~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~---~~~~~p~v~G~E~~G~V~~vG~~v~~~~v---   77 (352)
T 3fpc_A            5 AMLSIGKVGW-IEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGA---IGERHNMILGHEAVGEVVEVGSEVKDFKP---   77 (352)
T ss_dssp             EEEETTEEEE-EECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCT---TCCCSSEECCCEEEEEEEEECTTCCSCCT---
T ss_pred             EEccCCCceE-EeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCC---CCCCCCcccCCcceEEEEEECCCCCcCCC---
Confidence            4556667777 6778888899999999999999988876221222   22356778999999999999976554554   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (352)
T 3fpc_A           78 --------------------------------------------------------------------------------   77 (352)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCcccccccee---ecccCCCCccceeEEeeccc--eeeeCCCCCCcccccccc-h
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIF---FCATPPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALLE-P  301 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~-~  301 (408)
                           +|+|...+..+|+.|..|..|+++.|.+..   .++ ...+|+|++|+.++++  .++++|+++++++++.++ +
T Consensus        78 -----GdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~-~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~  151 (352)
T 3fpc_A           78 -----GDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFS-NVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDM  151 (352)
T ss_dssp             -----TCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBT-TTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTH
T ss_pred             -----CCEEEEccccCCCCchhhcCCCcCCccccccccccc-cCCCCcccceEEeccccCeEEECCCCCCHHHHhhccch
Confidence                 999999999999999999999999997642   122 2357999999999976  899999999999999885 7


Q ss_pred             hhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHH
Q psy1413         302 LSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHI  381 (408)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~  381 (408)
                      +.|+|+++++..+++++++||+|+|++|++++|+++.+|+++|++++++++|++.++++|+++++|+++    +++.+.+
T Consensus       152 ~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~----~~~~~~v  227 (352)
T 3fpc_A          152 MTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN----GDIVEQI  227 (352)
T ss_dssp             HHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGG----SCHHHHH
T ss_pred             hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCC----cCHHHHH
Confidence            889999998899999999999999999999999999999977999999999999999999999999987    7888999


Q ss_pred             HHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         382 IELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       382 ~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +++++++++|++|||+|++.+++.++
T Consensus       228 ~~~t~g~g~D~v~d~~g~~~~~~~~~  253 (352)
T 3fpc_A          228 LKATDGKGVDKVVIAGGDVHTFAQAV  253 (352)
T ss_dssp             HHHTTTCCEEEEEECSSCTTHHHHHH
T ss_pred             HHHcCCCCCCEEEECCCChHHHHHHH
Confidence            99998889999999999977766543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=2.9e-30  Score=248.79  Aligned_cols=226  Identities=17%  Similarity=0.244  Sum_probs=175.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP----------------------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~----------------------   58 (408)
                      |+++|||++|++.+. |.   ++..+|.++|||++|+|+++|++|++|++||||++.+                      
T Consensus        38 v~a~gi~~~D~~~~~-g~---~~~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~  113 (371)
T 1f8f_A           38 VVATGMCHTDLIVRD-QK---YPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFG  113 (371)
T ss_dssp             EEEEECCHHHHHHHT-TS---SCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHH
T ss_pred             EEEeecCchhHHHHc-CC---CCCCCCcccCcccceEEEEeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccc
Confidence            579999999999985 32   3356899999999999999999999999999998754                      


Q ss_pred             ---------------------------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCe
Q psy1413          59 ---------------------------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSD  104 (408)
Q Consensus        59 ---------------------------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~  104 (408)
                                                       ++...+...++..|+++++++++.++.++.+++.+......+ .+++
T Consensus       114 ~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~  193 (371)
T 1f8f_A          114 RNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASS  193 (371)
T ss_dssp             HSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCE
T ss_pred             cccccccccccccccccCCccccccccCCccccCeEEechhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCE
Confidence                                             011122234555677777755555555554544222122223 4789


Q ss_pred             EEEEccCccccccccccccccC------------------------------------------cceeEEEccCchH---
Q psy1413         105 VHYLTHGQIGDFRLSDPMIVGH------------------------------------------EASGIVSKVGAKV---  139 (408)
Q Consensus       105 vlv~g~G~vG~~~i~~a~~~G~------------------------------------------~~~~vv~~~g~~~---  139 (408)
                      |+|+|+|++|++++|+++.+|+                                          .++.+++++|...   
T Consensus       194 VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~  273 (371)
T 1f8f_A          194 FVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILK  273 (371)
T ss_dssp             EEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHH
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHH
Confidence            9999999999999998887664                                          1566788887632   


Q ss_pred             HHHhhccCCcEEEEEccCC--CCcccCHHHHHhcCcEEEEeecCC----CcHHHHHHHHHcCCCCCCCceeeeeccchHH
Q psy1413         140 KHLKATRPGGCLVIVGAGS--QDVKIPLVLTMTKEIDIRGVFRYA----NDYPIALAMVASGKVDVKKLITHNYLLEDTL  213 (408)
Q Consensus       140 ~~~~~l~~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l~g~~~~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~  213 (408)
                      +++++|+++|+++.+|...  .+.+++...++.|++++.|++...    ++++++++++++|++++.+++++ |||+|++
T Consensus       274 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~  352 (371)
T 1f8f_A          274 QGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEIN  352 (371)
T ss_dssp             HHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHH
T ss_pred             HHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHH
Confidence            6899999999999999865  356788888999999999987542    56899999999999999999999 9999999


Q ss_pred             HHHHHHHcCCCCceEEEEEc
Q psy1413         214 HAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       214 ~a~~~~~~~~~~~~kvvi~~  233 (408)
                      +||+.+.+++.  +|+++++
T Consensus       353 ~A~~~~~~~~~--~Kvvv~~  370 (371)
T 1f8f_A          353 QAAIDSRKGIT--LKPIIKI  370 (371)
T ss_dssp             HHHHHHHHTSC--SEEEEEC
T ss_pred             HHHHHHHCCCc--eEEEEee
Confidence            99999988753  6888865

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=99.96  E-value=1.9e-30  Score=249.17  Aligned_cols=227  Identities=19%  Similarity=0.200  Sum_probs=180.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |+++|||++|++.+.+.+ + ...++|.++|||++|+|+++|++|++|++||||++.+.                     
T Consensus        60 v~a~gi~~~D~~~~~g~~-~-~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g  137 (363)
T 3uog_A           60 TLAVSLNYRDKLVLETGM-G-LDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLG  137 (363)
T ss_dssp             EEEEECCHHHHHHHHHCT-T-CCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTT
T ss_pred             EEEEecCHHHHHHhcCCC-C-CCCCCCcCcccceEEEEEEECCCCCCCCCCCEEEEeccccccccccccccccccccccC
Confidence            579999999999986432 2 23578999999999999999999999999999997632                     


Q ss_pred             ---------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC---
Q psy1413          60 ---------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH---  126 (408)
Q Consensus        60 ---------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~---  126 (408)
                               |...+...++..|+++++++++.++.++.+++.+......+ .+++|+|+|+|++|++++|+++.+|+   
T Consensus       138 ~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi  217 (363)
T 3uog_A          138 GAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVI  217 (363)
T ss_dssp             TTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEE
T ss_pred             cCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEE
Confidence                     22334456677788888866666666655555332222333 58899999999999999999987775   


Q ss_pred             ---------------------------------------cceeEEEccCch--HHHHhhccCCcEEEEEccCCC-CcccC
Q psy1413         127 ---------------------------------------EASGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQ-DVKIP  164 (408)
Q Consensus       127 ---------------------------------------~~~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~-~~~~~  164 (408)
                                                             .++.+++++|..  .+++++++++|+++.+|.... ...++
T Consensus       218 ~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~  297 (363)
T 3uog_A          218 VTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGP  297 (363)
T ss_dssp             EEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCB
T ss_pred             EEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCcccCcC
Confidence                                                   245566666633  268999999999999998765 47788


Q ss_pred             HHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         165 LVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       165 ~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      ...++.|++++.|++... +++++++++++++++  +++++++|+|+|+++||+.+.+++  .+|+++++
T Consensus       298 ~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~--~gKvvi~~  363 (363)
T 3uog_A          298 VGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGL--KPVIDMRYKFTEVPEALAHLDRGP--FGKVVIEF  363 (363)
T ss_dssp             TTHHHHTCCEEEECCCCCHHHHHHHHHHHHHHTC--CCCEEEEEEGGGHHHHHHTGGGCC--SBEEEEEC
T ss_pred             HHHHHhCCcEEEEEecCCHHHHHHHHHHHHcCCC--ccceeeEEcHHHHHHHHHHHHcCC--CccEEEeC
Confidence            888999999999998877 889999999999986  568999999999999999999887  78988863

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=1.4e-29  Score=244.00  Aligned_cols=233  Identities=27%  Similarity=0.471  Sum_probs=197.1

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ +..+.|.+.+.++++.+.++++++.++.+.. |.   ....++..+|+|+.|+|+.+|+..+.++.          
T Consensus        19 l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~---~~~~~P~v~GhE~~G~V~~vG~~v~~~~~----------   83 (371)
T 1f8f_A           19 FEL-QALKIRQPQGDEVLVKVVATGMCHTDLIVRD-QK---YPVPLPAVLGHEGSGIIEAIGPNVTELQV----------   83 (371)
T ss_dssp             CEE-EEEEECCCCTTEEEEEEEEEECCHHHHHHHT-TS---SCCCSSBCCCCEEEEEEEEECTTCCSCCT----------
T ss_pred             eEE-EEecCCCCCCCEEEEEEEEeecCchhHHHHc-CC---CCCCCCcccCcccceEEEEeCCCCCCCCC----------
Confidence            555 5667788888999999999999988776542 21   12345778999999999999976544444          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    +|
T Consensus        84 ------------------------------------------------------------------------------Gd   85 (371)
T 1f8f_A           84 ------------------------------------------------------------------------------GD   85 (371)
T ss_dssp             ------------------------------------------------------------------------------TC
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          99


Q ss_pred             ceeecCCCcccccccccCCccccccceeeccc-----------------C-----CCCccceeEEeeccceeeeCCCCCC
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCAT-----------------P-----PDHGNLSRYYRHAADFCHKLPDHVS  292 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~-----~~~g~~~~~~~~~~~~~~~~p~~~~  292 (408)
                      +|...+ .+|+.|.+|++|++++|++...++.                 .     ...|+|++|+.++++.++++|++++
T Consensus        86 rV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~  164 (371)
T 1f8f_A           86 HVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVP  164 (371)
T ss_dssp             EEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTSC
T ss_pred             EEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCCCCC
Confidence            999999 9999999999999999987542211                 0     1258999999999999999999999


Q ss_pred             cccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       293 ~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      ++++++++ ++.|+++++ +...+++++++||+|+|++|++++|+++.+|+++|++++++++|++.++++|+++++++++
T Consensus       165 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~  244 (371)
T 1f8f_A          165 IELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKT  244 (371)
T ss_dssp             GGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTT
T ss_pred             HHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCc
Confidence            99999887 788899988 6788999999999999999999999999999987999999999999999999999999876


Q ss_pred             CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                          +++.+.+++++.+ ++|++||++|+..+++.+
T Consensus       245 ----~~~~~~~~~~~~g-g~D~vid~~g~~~~~~~~  275 (371)
T 1f8f_A          245 ----QDPVAAIKEITDG-GVNFALESTGSPEILKQG  275 (371)
T ss_dssp             ----SCHHHHHHHHTTS-CEEEEEECSCCHHHHHHH
T ss_pred             ----cCHHHHHHHhcCC-CCcEEEECCCCHHHHHHH
Confidence                6778888888877 999999999987766554

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=99.96  E-value=3.8e-30  Score=248.48  Aligned_cols=229  Identities=18%  Similarity=0.216  Sum_probs=172.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++|||++|++.+. |..  ...++|.++|||++|+|+++|++|++|++||||+..+...                   
T Consensus        40 v~a~gi~~~D~~~~~-g~~--~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~  116 (378)
T 3uko_A           40 ILYTALCHTDAYTWS-GKD--PEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVR  116 (378)
T ss_dssp             EEEEEECHHHHHHHT-TCC--TTCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSH
T ss_pred             EEEeecCHHHHHHhc-CCC--CCCCCCccCCccceEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcc
Confidence            579999999999985 321  2347899999999999999999999999999998655322                   


Q ss_pred             ------------------------------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCe
Q psy1413          62 ------------------------------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSD  104 (408)
Q Consensus        62 ------------------------------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~  104 (408)
                                                          ..+...++..|+++++++++.++.++.+++.+......+ .+++
T Consensus       117 ~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~  196 (378)
T 3uko_A          117 SATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSN  196 (378)
T ss_dssp             HHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCC
T ss_pred             cccccccccccCccccccCCcccccccCCcceEeEEEechhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCE
Confidence                                                222233444556666544444444444443222222223 4889


Q ss_pred             EEEEccCccccccccccccccC--------------------------------------------cceeEEEccCchH-
Q psy1413         105 VHYLTHGQIGDFRLSDPMIVGH--------------------------------------------EASGIVSKVGAKV-  139 (408)
Q Consensus       105 vlv~g~G~vG~~~i~~a~~~G~--------------------------------------------~~~~vv~~~g~~~-  139 (408)
                      |+|+|+|++|++++|+++.+|+                                            .++.+++++|... 
T Consensus       197 VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~  276 (378)
T 3uko_A          197 VAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSV  276 (378)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHH
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHH
Confidence            9999999999999999887765                                            1556778888642 


Q ss_pred             --HHHhhccCC-cEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccc
Q psy1413         140 --KHLKATRPG-GCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLE  210 (408)
Q Consensus       140 --~~~~~l~~g-G~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~  210 (408)
                        +++++++++ |+++.+|....  ..+++...++. ++++.|++..    .++++++++++++|+++++++++++|||+
T Consensus       277 ~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~  355 (378)
T 3uko_A          277 MRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLG  355 (378)
T ss_dssp             HHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-TCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGG
T ss_pred             HHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-CcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHH
Confidence              689999996 99999998653  45566666554 9999998754    26799999999999999999999999999


Q ss_pred             hHHHHHHHHHcCCCCceEEEEEcCc
Q psy1413         211 DTLHAFETAKTGAGNAIKVMIHCDR  235 (408)
Q Consensus       211 ~~~~a~~~~~~~~~~~~kvvi~~~~  235 (408)
                      |+++||+.+.+++.  .|+++++++
T Consensus       356 ~~~~A~~~~~~g~~--~Kvvi~~~~  378 (378)
T 3uko_A          356 EINKAFDLLHEGTC--LRCVLDTSK  378 (378)
T ss_dssp             GHHHHHHHTTCTTC--SEEEEETTC
T ss_pred             HHHHHHHHHHCCCc--eEEEEecCC
Confidence            99999999988653  499988753

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=99.96  E-value=2.6e-30  Score=246.89  Aligned_cols=227  Identities=18%  Similarity=0.201  Sum_probs=178.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |+++|||++|++.+. |.++  ..++|.++|||++|+|+++|++|++|++||||++.+.                     
T Consensus        36 v~a~gi~~~D~~~~~-g~~~--~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~  112 (348)
T 3two_A           36 ILYAGICHSDIHSAY-SEWK--EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKV  112 (348)
T ss_dssp             EEEEEECHHHHHHHT-TSSS--CCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTC
T ss_pred             EEEeeecccchhhhc-CCCC--CCCCCeecCcceeEEEEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCccc
Confidence            579999999999985 3322  2478999999999999999999999999999976321                     


Q ss_pred             ----------------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccc
Q psy1413          60 ----------------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDF  116 (408)
Q Consensus        60 ----------------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~  116 (408)
                                            |...+...++..|++++++++++++....+++.+.... .+ .+++|+|+|+|++|++
T Consensus       113 ~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~  191 (348)
T 3two_A          113 VFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFS-KVTKGTKVGVAGFGGLGSM  191 (348)
T ss_dssp             EESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHHT-TCCTTCEEEEESCSHHHHH
T ss_pred             ccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhhHHHHHHHHHhc-CCCCCCEEEEECCcHHHHH
Confidence                                  12233445566777777766666666555554322111 33 5889999999999999


Q ss_pred             cccccccccC--------------------------------cceeEEEccCch---HHHHhhccCCcEEEEEccCC-CC
Q psy1413         117 RLSDPMIVGH--------------------------------EASGIVSKVGAK---VKHLKATRPGGCLVIVGAGS-QD  160 (408)
Q Consensus       117 ~i~~a~~~G~--------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~-~~  160 (408)
                      ++|+++.+|+                                .++.+++++|..   .+++++++++|+++.+|.+. .+
T Consensus       192 a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~  271 (348)
T 3two_A          192 AVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEV  271 (348)
T ss_dssp             HHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGG
T ss_pred             HHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCC
Confidence            9999987775                                145677788765   37899999999999999887 66


Q ss_pred             cc-cCHHHHH-hcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCc
Q psy1413         161 VK-IPLVLTM-TKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDR  235 (408)
Q Consensus       161 ~~-~~~~~~~-~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~  235 (408)
                      .. ++...++ .|++++.|++... ++++++++++++|++++.   +++|||+|+++||+.+.+++. .+|++++.+.
T Consensus       272 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~-~gKvVi~~~~  345 (348)
T 3two_A          272 APVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIYPE---IDLILGKDIDTAYHNLTHGKA-KFRYVIDMKK  345 (348)
T ss_dssp             CCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCCCC---EEEECGGGHHHHHHHHHTTCC-CSEEEEEGGG
T ss_pred             cccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCCce---EEEEEHHHHHHHHHHHHcCCC-ceEEEEecCC
Confidence            66 8878877 9999999999887 889999999999999863   489999999999999998865 4588888654

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=99.96  E-value=4.6e-30  Score=244.45  Aligned_cols=227  Identities=22%  Similarity=0.263  Sum_probs=180.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEE-c----------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF-V----------------------   57 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~-~----------------------   57 (408)
                      |+++|||++|++.+.+. ++ ...++|.++|||++|+|+++|++|++|++||||.+ .                      
T Consensus        34 v~a~gi~~~D~~~~~g~-~~-~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~  111 (340)
T 3s2e_A           34 IEASGVCHTDLHAADGD-WP-VKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQ  111 (340)
T ss_dssp             EEEEEECHHHHHHHHTC-SS-SCCCSSBCCCSEEEEEEEEECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTC
T ss_pred             EEEeccCHHHHHHHcCC-CC-CCCCCCcccCCcceEEEEEECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccc
Confidence            47999999999998533 22 22468999999999999999999999999999953 1                      


Q ss_pred             -----------cCcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          58 -----------PEFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        58 -----------~~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                 .+|...+.+.++..|++++++++++++..+.+++.+. ....+ .+++++|+|+|++|++++|+++.+|
T Consensus       112 ~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G  190 (340)
T 3s2e_A          112 QNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMG  190 (340)
T ss_dssp             EEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT
T ss_pred             cccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC
Confidence                       1233455566777788888866676776655554332 12223 5889999999999999999998877


Q ss_pred             C----------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCCCcc
Q psy1413         126 H----------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDVK  162 (408)
Q Consensus       126 ~----------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~~  162 (408)
                      +                                        .++.+++++|...   +++++++++|+++.+|.+..+.+
T Consensus       191 a~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~  270 (340)
T 3s2e_A          191 LRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFG  270 (340)
T ss_dssp             CEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEE
T ss_pred             CeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCC
Confidence            5                                        2455677776543   68999999999999999888888


Q ss_pred             cCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         163 IPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       163 ~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ++...++++++++.|++... ++++++++++++|++++   ++++|+|+|+++||+.+.+++. .+|++++.+
T Consensus       271 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~-~Gkvvv~~~  339 (340)
T 3s2e_A          271 TPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKA---TVSTAKLDDVNDVFGRLREGKV-EGRVVLDFS  339 (340)
T ss_dssp             EEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCC---CEEEECGGGHHHHHHHHHTTCC-CSEEEEECC
T ss_pred             CCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCc---eEEEEeHHHHHHHHHHHHcCCC-ceEEEEecC
Confidence            88889999999999999887 88999999999999986   3678999999999999998764 567777754

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=99.96  E-value=8.3e-29  Score=234.28  Aligned_cols=130  Identities=27%  Similarity=0.243  Sum_probs=115.9

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI  346 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~  346 (408)
                      +|+|++|+.++++.++++|+++++++++.++ ...++++++ +...+++++++||+|+ |++|++++|+++.+|++ |++
T Consensus        92 ~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~-Vi~  170 (325)
T 3jyn_A           92 LGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAK-LIG  170 (325)
T ss_dssp             SCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCE-EEE
T ss_pred             CccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCE-EEE
Confidence            4789999999999999999999999998766 566777777 4578999999999997 99999999999999995 999


Q ss_pred             EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      +++++++++.++++|++.++|+++    +++.+.++++++++++|++|||+|+. .++.
T Consensus       171 ~~~~~~~~~~~~~~Ga~~~~~~~~----~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~  224 (325)
T 3jyn_A          171 TVSSPEKAAHAKALGAWETIDYSH----EDVAKRVLELTDGKKCPVVYDGVGQD-TWLT  224 (325)
T ss_dssp             EESSHHHHHHHHHHTCSEEEETTT----SCHHHHHHHHTTTCCEEEEEESSCGG-GHHH
T ss_pred             EeCCHHHHHHHHHcCCCEEEeCCC----ccHHHHHHHHhCCCCceEEEECCChH-HHHH
Confidence            999999999999999999999887    77888999999888999999999984 4443

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=99.96  E-value=5.2e-29  Score=240.15  Aligned_cols=235  Identities=29%  Similarity=0.422  Sum_probs=195.4

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ ++.++|.+.+.++++.+.++++++.++.+.. |..   ...++..+|+|+.|+|..+|+..+.++.          
T Consensus        22 l~~-~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~~---~~~~P~v~GhE~~G~V~~vG~~v~~~~v----------   86 (373)
T 1p0f_A           22 LSL-ETITVAPPKAHEVRIKILASGICGSDSSVLK-EII---PSKFPVILGHEAVGVVESIGAGVTCVKP----------   86 (373)
T ss_dssp             CEE-EEEEECCCCTTEEEEEEEEEECCHHHHHHHT-TSS---CCCSSBCCCCCEEEEEEEECTTCCSCCT----------
T ss_pred             eeE-EEeeCCCCCCCeEEEEEeEEeecchhHHHhc-CCC---CCCCCcccCcCceEEEEEECCCCCccCC----------
Confidence            556 5667788888999999999999988876542 211   1345778999999999999976544444          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    +|
T Consensus        87 ------------------------------------------------------------------------------Gd   88 (373)
T 1p0f_A           87 ------------------------------------------------------------------------------GD   88 (373)
T ss_dssp             ------------------------------------------------------------------------------TC
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          99


Q ss_pred             ceeecCCCcccccccccCCccccccceeec---ccC-----------------CCCccceeEEeeccceeeeCCCCCCcc
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---ATP-----------------PDHGNLSRYYRHAADFCHKLPDHVSLE  294 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~~~~~  294 (408)
                      +|...+..+|++|.+|++|++++|.+....   |..                 ...|+|++|+.++++.++++|++++++
T Consensus        89 rV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~  168 (373)
T 1p0f_A           89 KVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE  168 (373)
T ss_dssp             EEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTCCGG
T ss_pred             EEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECCCCCChh
Confidence            999999899999999999999999875431   110                 125999999999999999999999999


Q ss_pred             cccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCC
Q psy1413         295 EGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNH  372 (408)
Q Consensus       295 ~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~  372 (408)
                       ++.++ ++.|+++++ +...+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++|+++. 
T Consensus       169 -aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~-  246 (373)
T 1p0f_A          169 -SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY-  246 (373)
T ss_dssp             -GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGC-
T ss_pred             -hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccc-
Confidence             88887 678888887 67889999999999999999999999999999779999999999999999999999998631 


Q ss_pred             ChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         373 SLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                       .+++.+.+++++.+ ++|++|||+|+..+++.+
T Consensus       247 -~~~~~~~i~~~t~g-g~Dvvid~~g~~~~~~~~  278 (373)
T 1p0f_A          247 -DKPIYEVICEKTNG-GVDYAVECAGRIETMMNA  278 (373)
T ss_dssp             -SSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHH
T ss_pred             -cchHHHHHHHHhCC-CCCEEEECCCCHHHHHHH
Confidence             14577888888876 999999999987766654

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=99.96  E-value=1.2e-29  Score=241.89  Aligned_cols=234  Identities=31%  Similarity=0.557  Sum_probs=199.7

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCcccc-ccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~-~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      +.+ +..+.|.+.+.++++.+.++++++.++.+.. |.... .....+..+|.|+.|+|..+|+..+.++.         
T Consensus        13 l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v---------   81 (343)
T 2dq4_A           13 LTL-VDRPVPEPGPGEILVRVEAASICGTDLHIWK-WDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQV---------   81 (343)
T ss_dssp             CEE-EECCCCCCCTTEEEEEEEEEECCHHHHHHHT-TCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSCT---------
T ss_pred             EEE-EeccCCCCCCCEEEEEEEEEeechhhHHHHc-CCCCccccCCCCCcCCccceEEEEEECCCCCcCCC---------
Confidence            666 5677888889999999999999988776542 21110 02346678999999999999976544444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        82 -------------------------------------------------------------------------------G   82 (343)
T 2dq4_A           82 -------------------------------------------------------------------------------G   82 (343)
T ss_dssp             -------------------------------------------------------------------------------T
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           9


Q ss_pred             CceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhh-cc
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACR-RA  312 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~-~~  312 (408)
                      |+|...+..+|++|.+|.+|++++|++...+|. ..+|+|++|+.++++.++++|+++++++|+++++++++++++. ..
T Consensus        83 drV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~~l~~~~  161 (343)
T 2dq4_A           83 DHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGS  161 (343)
T ss_dssp             CEEEECCEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHHHHHHHHHHHHSTT
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCCCcceecC-CCCCcceeEEEEchHHeEECCCCCCHHHHHhhhHHHHHHHHHHHhC
Confidence            999999989999999999999999999887765 3579999999999999999999999999998888889999997 78


Q ss_pred             CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         313 GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       313 ~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .+ +++++||+|+|++|+.++|+++.+|+++|+++++++++++.++++ ++.++++++    +++.+.+++++ ++++|+
T Consensus       162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~----~~~~~~~~~~~-~~g~D~  234 (343)
T 2dq4_A          162 GV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE----EDLLEVVRRVT-GSGVEV  234 (343)
T ss_dssp             CC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT----SCHHHHHHHHH-SSCEEE
T ss_pred             CC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc----cCHHHHHHHhc-CCCCCE
Confidence            88 999999999999999999999999995599999999999999999 999999876    67888888888 789999


Q ss_pred             EEEcccchhhhhhc
Q psy1413         393 TIDCSGIESTIKLG  406 (408)
Q Consensus       393 i~d~~g~~~~~~~~  406 (408)
                      +||++|+..+++.+
T Consensus       235 vid~~g~~~~~~~~  248 (343)
T 2dq4_A          235 LLEFSGNEAAIHQG  248 (343)
T ss_dssp             EEECSCCHHHHHHH
T ss_pred             EEECCCCHHHHHHH
Confidence            99999986666544

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=99.96  E-value=9.5e-30  Score=245.60  Aligned_cols=226  Identities=20%  Similarity=0.252  Sum_probs=171.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------   62 (408)
                      |+++|||++|++.+. |.   ...++|.++|||++|+|+++|++|++|++||||++.+...|                  
T Consensus        40 v~a~gi~~~D~~~~~-g~---~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~  115 (376)
T 1e3i_A           40 VIATCVCPTDINATD-PK---KKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLR  115 (376)
T ss_dssp             EEEEECCHHHHHTTC-TT---SCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCC
T ss_pred             EeEEeEchhhHHHhc-CC---CCCCCCcccCccccEEEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcC
Confidence            579999999999884 42   22467999999999999999999999999999997653211                  


Q ss_pred             ----------------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-c
Q psy1413          63 ----------------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-C  101 (408)
Q Consensus        63 ----------------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~  101 (408)
                                                              .+...++..|+++++++++.++.++.+++.+......+ .
T Consensus       116 ~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~  195 (376)
T 1e3i_A          116 NFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTP  195 (376)
T ss_dssp             CSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCT
T ss_pred             ccccccccccccccCccccccCCcccccccCCccceeEEEeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCC
Confidence                                                    11223444566666644444544444443221112222 4


Q ss_pred             CCeEEEEccCccccccccccccccC--------------------------------------------cceeEEEccCc
Q psy1413         102 GSDVHYLTHGQIGDFRLSDPMIVGH--------------------------------------------EASGIVSKVGA  137 (408)
Q Consensus       102 g~~vlv~g~G~vG~~~i~~a~~~G~--------------------------------------------~~~~vv~~~g~  137 (408)
                      +++|+|+|+|++|++++|+++.+|+                                            .++.+++++|.
T Consensus       196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~  275 (376)
T 1e3i_A          196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT  275 (376)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCC
Confidence            7899999999999999998887664                                            13556777775


Q ss_pred             h---HHHHhhccCC-cEEEEEccCCCCcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeecc
Q psy1413         138 K---VKHLKATRPG-GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLL  209 (408)
Q Consensus       138 ~---~~~~~~l~~g-G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l  209 (408)
                      .   .+++++++++ |+++.+|.+..+.+++...++.++ ++.|++..    .++++++++++++|+++++++++++|||
T Consensus       276 ~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l  354 (376)
T 1e3i_A          276 AQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF  354 (376)
T ss_dssp             HHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEG
T ss_pred             HHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecH
Confidence            3   2679999999 999999986666778888888899 99998743    2579999999999999999999999999


Q ss_pred             chHHHHHHHHHcCCCCceEEEEEc
Q psy1413         210 EDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       210 ~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      +|+++||+.+.+++  .+|+++++
T Consensus       355 ~~~~~A~~~~~~~~--~~Kvvi~~  376 (376)
T 1e3i_A          355 ESINDAIDLMKEGK--SIRTILTF  376 (376)
T ss_dssp             GGHHHHHHHHHTTC--CSEEEEEC
T ss_pred             HHHHHHHHHHhcCC--cceEEEeC
Confidence            99999999998865  46888763

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=99.96  E-value=4.6e-29  Score=238.06  Aligned_cols=242  Identities=27%  Similarity=0.395  Sum_probs=200.3

Q ss_pred             eeccce-eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          69 LRRRFS-LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        69 ~~~p~~-~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      +..+.. +.+ ++.+.|.+.+.++++.+.++++++.++.+.. |........++..+|.|+.|+|..+|+..+.++.   
T Consensus         6 ~~~~g~~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v---   80 (345)
T 3jv7_A            6 YTEIGSEPVV-VDIPTPTPGPGEILLKVTAAGLCHSDIFVMD-MPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV---   80 (345)
T ss_dssp             ECSTTSCCEE-EECCCCCCCTTCEEEEEEEEECCHHHHHHHH-SCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT---
T ss_pred             EcCCCCceEE-EEecCCCCCCCeEEEEEEEEeeCHHHHHHHc-CCCCccCCCCCcccCcccEEEEEEECCCCCCCCC---
Confidence            333433 566 6678888899999999999999988876542 2222223566788999999999999976544554   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        81 --------------------------------------------------------------------------------   80 (345)
T 3jv7_A           81 --------------------------------------------------------------------------------   80 (345)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeec-----ccCCCCccceeEEeec-cceeeeCCCCCCcccccccc-
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC-----ATPPDHGNLSRYYRHA-ADFCHKLPDHVSLEEGALLE-  300 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa~~~-  300 (408)
                           +|+|...+..+|+.|..|.+|++++|.....+     +. ..+|+|++|+.++ ++.++++|+ +++++++.++ 
T Consensus        81 -----GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~  153 (345)
T 3jv7_A           81 -----GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGL-GSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTD  153 (345)
T ss_dssp             -----TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTT-TBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGT
T ss_pred             -----CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCc-CCCceeeEEEEecchhceEeCCC-CCHHHhhhhhh
Confidence                 99999999999999999999999999433332     22 2579999999999 999999999 9999998776 


Q ss_pred             hhhhhhhhhhcc--CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHH
Q psy1413         301 PLSVGVHACRRA--GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       301 ~~~~~~~~~~~~--~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                      +..|+|+++.+.  .+++++++||+|+|++|++++|+++.+|..+|++++++++|++.++++|+++++++++     +..
T Consensus       154 ~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-----~~~  228 (345)
T 3jv7_A          154 AGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-----GAA  228 (345)
T ss_dssp             TTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-----THH
T ss_pred             hHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-----cHH
Confidence            788899999764  8999999999999999999999999996666999999999999999999999999753     567


Q ss_pred             HHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         379 THIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       379 ~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +.++++++++++|++|||+|++.+++.++
T Consensus       229 ~~v~~~t~g~g~d~v~d~~G~~~~~~~~~  257 (345)
T 3jv7_A          229 DAIRELTGGQGATAVFDFVGAQSTIDTAQ  257 (345)
T ss_dssp             HHHHHHHGGGCEEEEEESSCCHHHHHHHH
T ss_pred             HHHHHHhCCCCCeEEEECCCCHHHHHHHH
Confidence            88899998889999999999987776553

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=99.96  E-value=4.9e-30  Score=244.53  Aligned_cols=230  Identities=24%  Similarity=0.324  Sum_probs=174.3

Q ss_pred             CCeeeecccchhhhhcCCCCC-CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~-~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------   60 (408)
                      |+++|||++|++.+. |..+. ....+|.++|||++|+|+++|++|++|++||||++.+..                   
T Consensus        32 v~a~gi~~~D~~~~~-g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~  110 (343)
T 2dq4_A           32 VEAASICGTDLHIWK-WDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNT  110 (343)
T ss_dssp             EEEEECCHHHHHHHT-TCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTC
T ss_pred             EEEEeechhhHHHHc-CCCCccccCCCCCcCCccceEEEEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCc
Confidence            479999999999885 32110 024679999999999999999999999999999975422                   


Q ss_pred             --------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC
Q psy1413          61 --------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        61 --------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                                    ...+...++..|+++++++++.+ .++.+++.+......+.+++++|+|+|++|++++|+++.+|+
T Consensus       111 ~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga  189 (343)
T 2dq4_A          111 QILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGA  189 (343)
T ss_dssp             EEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHHHHSTTCCTTSCEEEECCSHHHHHHHHHHHHTTC
T ss_pred             ceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                          12233345556666666333332 233333322110122278999999999999999988877665


Q ss_pred             -c----------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcc
Q psy1413         127 -E----------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVK  162 (408)
Q Consensus       127 -~----------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~  162 (408)
                       .                                        ++.+++++|..   .+++++++++|+++.+|.+..+..
T Consensus       190 ~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~  269 (343)
T 2dq4_A          190 GPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIR  269 (343)
T ss_dssp             CSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEE
T ss_pred             CEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCce
Confidence             1                                        34456666653   267999999999999998777788


Q ss_pred             cCH-HHHHhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         163 IPL-VLTMTKEIDIRGVFRY--ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       163 ~~~-~~~~~~~~~l~g~~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ++. ..++.|++++.|++..  .++++++++++++|+++++++++++|||+|+++||+.+.+++.  +|++++++
T Consensus       270 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--gKvv~~~~  342 (343)
T 2dq4_A          270 FDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA--VKVILDPK  342 (343)
T ss_dssp             ECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC--SEEEEETT
T ss_pred             eCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc--eEEEEeeC
Confidence            888 8899999999998765  3789999999999999999999999999999999999988754  89888753

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=99.96  E-value=1.7e-28  Score=233.65  Aligned_cols=130  Identities=17%  Similarity=0.242  Sum_probs=117.3

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI  346 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~  346 (408)
                      +|+|++|+.++++.++++|+++++++|+.++ ...++++++ +...+++++++||+|+ |++|++++|+++.+|++ |++
T Consensus        96 ~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~-Vi~  174 (340)
T 3gms_A           96 EGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFR-LIA  174 (340)
T ss_dssp             SCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCE-EEE
T ss_pred             CccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCE-EEE
Confidence            4789999999999999999999999999776 566777777 7789999999999999 79999999999999995 999


Q ss_pred             EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413         347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~  404 (408)
                      +++++++++.++++|++.++|+++    +++.+.++++++++++|++|||+|+.....
T Consensus       175 ~~~~~~~~~~~~~lga~~~~~~~~----~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~  228 (340)
T 3gms_A          175 VTRNNKHTEELLRLGAAYVIDTST----APLYETVMELTNGIGADAAIDSIGGPDGNE  228 (340)
T ss_dssp             EESSSTTHHHHHHHTCSEEEETTT----SCHHHHHHHHTTTSCEEEEEESSCHHHHHH
T ss_pred             EeCCHHHHHHHHhCCCcEEEeCCc----ccHHHHHHHHhCCCCCcEEEECCCChhHHH
Confidence            999999999999999999999877    778889999998889999999999876543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=1.8e-29  Score=243.47  Aligned_cols=226  Identities=19%  Similarity=0.240  Sum_probs=171.2

Q ss_pred             CCeeeecccchh-hhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc-----------------
Q psy1413           1 MHCVGICGSDVH-YLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN-----------------   62 (408)
Q Consensus         1 V~a~gic~sDl~-~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~-----------------   62 (408)
                      |+++|||++|++ .+. |.   .+..+|.++|||++|+|+++|++|++|++||||++.+...|                 
T Consensus        40 v~a~gi~~~D~~~~~~-g~---~~~~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~  115 (374)
T 1cdo_A           40 IIATGVCHTDLYHLFE-GK---HKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKG  115 (374)
T ss_dssp             EEEEECCHHHHHHHHT-TC---CTTSCSEECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCS
T ss_pred             EeEEeechhhHHHHhC-CC---CCCCCCcccCccceEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCc
Confidence            579999999999 774 42   22568999999999999999999999999999987653211                 


Q ss_pred             -------------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCe
Q psy1413          63 -------------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSD  104 (408)
Q Consensus        63 -------------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~  104 (408)
                                                           .+...++..|+++++++++.++.++.+++.+......+ .+++
T Consensus       116 ~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  195 (374)
T 1cdo_A          116 WANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGST  195 (374)
T ss_dssp             GGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCE
T ss_pred             ccccccccccCCccccccCCcccccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCE
Confidence                                                 12223445566666644455554444443221111222 4789


Q ss_pred             EEEEccCccccccccccccccC--------------------------------------------cceeEEEccCch--
Q psy1413         105 VHYLTHGQIGDFRLSDPMIVGH--------------------------------------------EASGIVSKVGAK--  138 (408)
Q Consensus       105 vlv~g~G~vG~~~i~~a~~~G~--------------------------------------------~~~~vv~~~g~~--  138 (408)
                      |+|+|+|++|++++|+++.+|+                                            .++.+++++|..  
T Consensus       196 VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~  275 (374)
T 1cdo_A          196 CAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGV  275 (374)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHH
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHH
Confidence            9999999999999998887664                                            135567777653  


Q ss_pred             -HHHHhhccCC-cEEEEEccCCC-CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413         139 -VKHLKATRPG-GCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLED  211 (408)
Q Consensus       139 -~~~~~~l~~g-G~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~  211 (408)
                       .+++++++++ |+++.+|.... +.+++...++.++ ++.|++..    .++++++++++++|++++.++++++|||+|
T Consensus       276 ~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~  354 (374)
T 1cdo_A          276 MRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLES  354 (374)
T ss_dssp             HHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGG
T ss_pred             HHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHH
Confidence             2679999999 99999998764 6678888888888 99998653    257999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCceEEEEEc
Q psy1413         212 TLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       212 ~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      +++||+.+.+++  ..|+++++
T Consensus       355 ~~~A~~~~~~~~--~~kvvi~~  374 (374)
T 1cdo_A          355 VNDAIDLMKHGK--CIRTVLSL  374 (374)
T ss_dssp             HHHHHHHHHTTC--CSEEEEEC
T ss_pred             HHHHHHHHHCCC--eeEEEEeC
Confidence            999999998875  36888763

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=99.96  E-value=2.7e-29  Score=242.12  Aligned_cols=225  Identities=20%  Similarity=0.247  Sum_probs=170.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++|||++|++.+. |.   ++..+|.++|||++|+|+++|++|++|++||||++.+...                   
T Consensus        41 v~a~gi~~~D~~~~~-g~---~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~  116 (373)
T 1p0f_A           41 ILASGICGSDSSVLK-EI---IPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKND  116 (373)
T ss_dssp             EEEEECCHHHHHHHT-TS---SCCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCS
T ss_pred             EeEEeecchhHHHhc-CC---CCCCCCcccCcCceEEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCC
Confidence            579999999999885 32   2256899999999999999999999999999999765321                   


Q ss_pred             -----------------------------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeE
Q psy1413          62 -----------------------------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDV  105 (408)
Q Consensus        62 -----------------------------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~v  105 (408)
                                                         ..+...++..|++++++ ++.++.++.+++.+......+ .+++|
T Consensus       117 ~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~V  195 (373)
T 1p0f_A          117 MGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTC  195 (373)
T ss_dssp             TTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEE
T ss_pred             cccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEE
Confidence                                               12223445556666664 555554444443221111222 47899


Q ss_pred             EEEccCccccccccccccccC--------------------------------------------cceeEEEccCch---
Q psy1413         106 HYLTHGQIGDFRLSDPMIVGH--------------------------------------------EASGIVSKVGAK---  138 (408)
Q Consensus       106 lv~g~G~vG~~~i~~a~~~G~--------------------------------------------~~~~vv~~~g~~---  138 (408)
                      +|+|+|++|++++|+++.+|+                                            .++.+++++|..   
T Consensus       196 lV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~  275 (373)
T 1p0f_A          196 AVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETM  275 (373)
T ss_dssp             EEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHH
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHH
Confidence            999999999999998886664                                            135567777753   


Q ss_pred             HHHHhhccCC-cEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC--C-CcHHHHHHHHHcCCCCCCCceeeeeccchH
Q psy1413         139 VKHLKATRPG-GCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY--A-NDYPIALAMVASGKVDVKKLITHNYLLEDT  212 (408)
Q Consensus       139 ~~~~~~l~~g-G~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~--~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~  212 (408)
                      .+++++++++ |+++.+|....  +.+++...++.++ ++.|++..  . ++++++++++++|++++.++++++|||+|+
T Consensus       276 ~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~  354 (373)
T 1p0f_A          276 MNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQI  354 (373)
T ss_dssp             HHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGH
T ss_pred             HHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEEeeccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHH
Confidence            2679999999 99999997653  5677777888888 99998643  2 689999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCceEEEEEc
Q psy1413         213 LHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       213 ~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      ++||+.+.+++  ..|+++++
T Consensus       355 ~~A~~~~~~~~--~~kvvi~~  373 (373)
T 1p0f_A          355 NKAFELLSSGQ--GVRSIMIY  373 (373)
T ss_dssp             HHHHHHTTTSS--CSEEEEEC
T ss_pred             HHHHHHHHCCC--cceEEEeC
Confidence            99999998765  36888753

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=99.96  E-value=8.7e-29  Score=238.87  Aligned_cols=237  Identities=27%  Similarity=0.419  Sum_probs=196.4

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ ++.++|.+.+.++++.+.++++++.++.+.. |.   ....++..+|+|+.|+|+.+|+..+.++.          
T Consensus        21 l~~-~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~---~~~~~P~v~GhE~~G~V~~vG~~v~~~~v----------   85 (376)
T 1e3i_A           21 LCI-EEIEVSPPKACEVRIQVIATCVCPTDINATD-PK---KKALFPVVLGHECAGIVESVGPGVTNFKP----------   85 (376)
T ss_dssp             CEE-EEEEECCCCTTEEEEEEEEEECCHHHHHTTC-TT---SCCCSSBCCCCEEEEEEEEECTTCCSCCT----------
T ss_pred             eEE-EEeeCCCCCCCeEEEEEeEEeEchhhHHHhc-CC---CCCCCCcccCccccEEEEEECCCCccCCC----------
Confidence            556 5667788888999999999999988776542 21   11346778999999999999976544444          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    +|
T Consensus        86 ------------------------------------------------------------------------------Gd   87 (376)
T 1e3i_A           86 ------------------------------------------------------------------------------GD   87 (376)
T ss_dssp             ------------------------------------------------------------------------------TC
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          99


Q ss_pred             ceeecCCCcccccccccCCcccccccee----e---cccC-----------------CCCccceeEEeeccceeeeCCCC
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIF----F---CATP-----------------PDHGNLSRYYRHAADFCHKLPDH  290 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~  290 (408)
                      +|...+..+|++|.+|++|++++|.+..    +   .|..                 ...|+|++|+.++++.++++|++
T Consensus        88 rV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  167 (376)
T 1e3i_A           88 KVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDE  167 (376)
T ss_dssp             EEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             EEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccEEECCCC
Confidence            9999999999999999999999998754    1   1211                 12499999999999999999999


Q ss_pred             CCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEec
Q psy1413         291 VSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLI  368 (408)
Q Consensus       291 ~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~  368 (408)
                      +++++++.++ ++.|+|+++ +...+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++|+
T Consensus       168 l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~  247 (376)
T 1e3i_A          168 ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNP  247 (376)
T ss_dssp             CCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEcc
Confidence            9999999887 678888887 66889999999999999999999999999999779999999999999999999999998


Q ss_pred             CCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         369 DRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      ++.  .+++.+.+++++.+ ++|++|||+|+..+++.++
T Consensus       248 ~~~--~~~~~~~v~~~~~~-g~Dvvid~~G~~~~~~~~~  283 (376)
T 1e3i_A          248 REL--DKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAV  283 (376)
T ss_dssp             GGC--SSCHHHHHHHHHTS-CBSEEEESSCCHHHHHHHH
T ss_pred             ccc--cchHHHHHHHHhCC-CccEEEECCCCHHHHHHHH
Confidence            631  14577888888876 9999999999877666543

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=99.96  E-value=2.1e-29  Score=243.06  Aligned_cols=226  Identities=21%  Similarity=0.269  Sum_probs=169.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------   62 (408)
                      |+++|||++|++++. |.   .+..+|.++|||++|+|+++|++|++|++||||++.+...|                  
T Consensus        40 v~a~gi~~~D~~~~~-g~---~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~  115 (374)
T 2jhf_A           40 MVATGICRSDDHVVS-GT---LVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKND  115 (374)
T ss_dssp             EEEEECCHHHHHHHH-TS---SCCCSSBCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCS
T ss_pred             EeEEeechhhHHHHc-CC---CCCCCCcccCcCceEEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCc
Confidence            579999999999885 42   22247999999999999999999999999999987653211                  


Q ss_pred             ------------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeE
Q psy1413          63 ------------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDV  105 (408)
Q Consensus        63 ------------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~v  105 (408)
                                                          .+...++..|+++++++++.++.++.+++.+......+ .+++|
T Consensus       116 ~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V  195 (374)
T 2jhf_A          116 LSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTC  195 (374)
T ss_dssp             SSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEE
T ss_pred             cccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEE
Confidence                                                11223444556666544444544444443221111222 47899


Q ss_pred             EEEccCccccccccccccccC--------------------------------------------cceeEEEccCch---
Q psy1413         106 HYLTHGQIGDFRLSDPMIVGH--------------------------------------------EASGIVSKVGAK---  138 (408)
Q Consensus       106 lv~g~G~vG~~~i~~a~~~G~--------------------------------------------~~~~vv~~~g~~---  138 (408)
                      +|+|+|++|++++|+++.+|+                                            .++.+++++|..   
T Consensus       196 lV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~  275 (374)
T 2jhf_A          196 AVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTM  275 (374)
T ss_dssp             EEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHH
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHH
Confidence            999999999999998887664                                            135567777653   


Q ss_pred             HHHHhhccCC-cEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413         139 VKHLKATRPG-GCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLED  211 (408)
Q Consensus       139 ~~~~~~l~~g-G~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~  211 (408)
                      .+++++++++ |+++.+|....  +.+++...+++++ ++.|++..    .++++++++++++|++++.++++++|||+|
T Consensus       276 ~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~  354 (374)
T 2jhf_A          276 VTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEK  354 (374)
T ss_dssp             HHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGG
T ss_pred             HHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHH
Confidence            2679999999 99999997653  5677777888889 99998743    257999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCceEEEEEc
Q psy1413         212 TLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       212 ~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      +++||+.+.+++  ..|+++++
T Consensus       355 ~~~A~~~~~~~~--~~Kvvi~~  374 (374)
T 2jhf_A          355 INEGFDLLRSGE--SIRTILTF  374 (374)
T ss_dssp             HHHHHHHHHTTC--CSEEEEEC
T ss_pred             HHHHHHHHHCCC--cceEEEeC
Confidence            999999998865  36888763

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=99.96  E-value=8.2e-29  Score=241.14  Aligned_cols=236  Identities=28%  Similarity=0.480  Sum_probs=199.5

Q ss_pred             ccceeeecccccCCC-CCCcceEEEEeeeeecCCeEEEEccCcccc----ccccccccccCcceeEEEccCchH------
Q psy1413          71 RRFSLRFREQKPIED-PDDHEVLLEMHCVGICGSDVHYLTHGQIGD----FRLSDPMIVGHEASGIVSKVGAKV------  139 (408)
Q Consensus        71 ~p~~~~~~~~~~lp~-~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~----~~i~~a~~~G~~~~~vv~~~g~~~------  139 (408)
                      .+..+.+ +..++|. +.+.++++.+.++++++.++.+...+.-|.    ....++..+|.|+.|+|..+|+..      
T Consensus        38 ~~~~l~~-~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~  116 (404)
T 3ip1_A           38 RYPEVRV-EEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTN  116 (404)
T ss_dssp             EEEEEEE-EEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTT
T ss_pred             eCCceEE-EEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccC
Confidence            3446777 7788888 888999999999999988876643221111    124567789999999999999754      


Q ss_pred             HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHH
Q psy1413         140 KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETA  219 (408)
Q Consensus       140 ~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~  219 (408)
                      ..++.                                                                           
T Consensus       117 ~~~~v---------------------------------------------------------------------------  121 (404)
T 3ip1_A          117 KRFEI---------------------------------------------------------------------------  121 (404)
T ss_dssp             EECCT---------------------------------------------------------------------------
T ss_pred             CCCCC---------------------------------------------------------------------------
Confidence            33333                                                                           


Q ss_pred             HcCCCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcc-----
Q psy1413         220 KTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLE-----  294 (408)
Q Consensus       220 ~~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~-----  294 (408)
                                   +|+|...+..+|+.|.+|++|++++|++...+|.. .+|+|++|+.++++.++++|++++..     
T Consensus       122 -------------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~-~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~  187 (404)
T 3ip1_A          122 -------------GEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRL  187 (404)
T ss_dssp             -------------TCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTT-BCCSSBSEEEEEGGGEEECGGGBTTBCTHHH
T ss_pred             -------------CCEEEECCccCCCCCHHHHCcCcccCccccccCCC-CCCCCcceEEechHHeEeccccccccccccc
Confidence                         99999999999999999999999999999888873 68999999999999999999988632     


Q ss_pred             -ccc-ccchhhhhhhhhh-c-cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         295 -EGA-LLEPLSVGVHACR-R-AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       295 -~aa-~~~~~~~~~~~~~-~-~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                       +++ +..++.++|+++. . ..+++++++||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++|+++
T Consensus       188 ~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~  267 (404)
T 3ip1_A          188 FLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTK  267 (404)
T ss_dssp             HHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTT
T ss_pred             hhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCC
Confidence             244 4448889999984 3 47999999999999999999999999999977999999999999999999999999887


Q ss_pred             CCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         371 NHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                          +++.+.++++++++++|++|||+|+.
T Consensus       268 ----~~~~~~i~~~t~g~g~D~vid~~g~~  293 (404)
T 3ip1_A          268 ----ENFVEAVLDYTNGLGAKLFLEATGVP  293 (404)
T ss_dssp             ----SCHHHHHHHHTTTCCCSEEEECSSCH
T ss_pred             ----CCHHHHHHHHhCCCCCCEEEECCCCc
Confidence                78889999999888999999999988

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=99.96  E-value=2.3e-29  Score=239.44  Aligned_cols=227  Identities=25%  Similarity=0.330  Sum_probs=174.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |+++|||++|++.+. |.++ ...++|.++|||++|+|+++|++|++|++||||++.+.                     
T Consensus        32 v~a~gi~~~D~~~~~-g~~~-~~~~~p~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~  109 (339)
T 1rjw_A           32 IKACGVCHTDLHAAH-GDWP-VKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQ  109 (339)
T ss_dssp             EEEEEECHHHHHHHH-TCSS-SCCCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTC
T ss_pred             EEEEeEchhhHHHhc-CCCC-cCCCCCeeccccceEEEEEECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCc
Confidence            469999999999885 3222 22467999999999999999999999999999986431                     


Q ss_pred             -------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413          60 -------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG  125 (408)
Q Consensus        60 -------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G  125 (408)
                                   +...+...++..|+++++++++.++.+..+++.+.... .+ .+++++|+|+|++|++++|+++.+|
T Consensus       110 ~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~~~a~~~G  188 (339)
T 1rjw_A          110 KNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVT-GAKPGEWVAIYGIGGLGHVAVQYAKAMG  188 (339)
T ss_dssp             EEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHHH-TCCTTCEEEEECCSTTHHHHHHHHHHTT
T ss_pred             ceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                         11223345566677777755555655444443221111 22 4789999999999999999887666


Q ss_pred             C----------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCCCcc
Q psy1413         126 H----------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDVK  162 (408)
Q Consensus       126 ~----------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~~  162 (408)
                      +                                        .++.+++++|...   +++++++++|+++.+|.+..+.+
T Consensus       189 a~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~  268 (339)
T 1rjw_A          189 LNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMP  268 (339)
T ss_dssp             CEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEE
T ss_pred             CEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCc
Confidence            4                                        1456677777532   67899999999999998877777


Q ss_pred             cCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         163 IPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       163 ~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ++...++.|++++.|++... ++++++++++++|++++.   +++|||+|+++||+.+.+++. .+|++++.+
T Consensus       269 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~-~gKvvi~~~  337 (339)
T 1rjw_A          269 IPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTI---IEVQPLEKINEVFDRMLKGQI-NGRVVLTLE  337 (339)
T ss_dssp             EEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCC-SSEEEEECC
T ss_pred             cCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCcc---EEEEcHHHHHHHHHHHHcCCC-ceEEEEecC
Confidence            88888999999999988776 789999999999999763   589999999999999988654 578887754

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=99.96  E-value=2.2e-28  Score=232.25  Aligned_cols=129  Identities=26%  Similarity=0.334  Sum_probs=113.6

Q ss_pred             ccceeEEeec-cceeeeCCCCCCccc---ccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413         271 GNLSRYYRHA-ADFCHKLPDHVSLEE---GALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASR  343 (408)
Q Consensus       271 g~~~~~~~~~-~~~~~~~p~~~~~~~---aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~  343 (408)
                      |+|++|+.++ ++.++++|+++++++   ++.++ ...++++++. ...+++++++||+|+ |++|++++|+++.+|++ 
T Consensus        97 G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~-  175 (334)
T 3qwb_A           97 STFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAH-  175 (334)
T ss_dssp             SCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCE-
T ss_pred             CcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCE-
Confidence            6789999999 999999999999998   65554 5667888874 468999999999997 99999999999999996 


Q ss_pred             EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      |+++++++++++.++++|++.++++++    +++.+.++++++++++|++|||+|+ ..++.
T Consensus       176 Vi~~~~~~~~~~~~~~~ga~~~~~~~~----~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~  232 (334)
T 3qwb_A          176 TIAVASTDEKLKIAKEYGAEYLINASK----EDILRQVLKFTNGKGVDASFDSVGK-DTFEI  232 (334)
T ss_dssp             EEEEESSHHHHHHHHHTTCSEEEETTT----SCHHHHHHHHTTTSCEEEEEECCGG-GGHHH
T ss_pred             EEEEeCCHHHHHHHHHcCCcEEEeCCC----chHHHHHHHHhCCCCceEEEECCCh-HHHHH
Confidence            999999999999999999999999987    7888899999988899999999997 44443

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=99.96  E-value=1.4e-28  Score=237.17  Aligned_cols=236  Identities=25%  Similarity=0.426  Sum_probs=196.1

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEE-EEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVH-YLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vl-v~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      +.+ +..++|.+.+.++++.+.++++++.++. +.. |..   ...++..+|.|+.|+|..+|+..+.++.         
T Consensus        21 l~~-~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~-g~~---~~~~P~v~GhE~~G~V~~vG~~V~~~~v---------   86 (374)
T 1cdo_A           21 LVI-EEIEVDVPHANEIRIKIIATGVCHTDLYHLFE-GKH---KDGFPVVLGHEGAGIVESVGPGVTEFQP---------   86 (374)
T ss_dssp             CEE-EEEEECCCCTTEEEEEEEEEECCHHHHHHHHT-TCC---TTSCSEECCCCEEEEEEEECTTCCSCCT---------
T ss_pred             eEE-EEeeCCCCCCCEEEEEEeEEeechhhHHHHhC-CCC---CCCCCcccCccceEEEEEECCCCccCCC---------
Confidence            555 5667788888999999999999988876 432 211   1346778999999999999976544444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        87 -------------------------------------------------------------------------------G   87 (374)
T 1cdo_A           87 -------------------------------------------------------------------------------G   87 (374)
T ss_dssp             -------------------------------------------------------------------------------T
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           9


Q ss_pred             CceeecCCCcccccccccCCccccccceeec---ccC-----------------CCCccceeEEeeccceeeeCCCCCCc
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---ATP-----------------PDHGNLSRYYRHAADFCHKLPDHVSL  293 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~~~~  293 (408)
                      |+|...+..+|+.|.+|++|++++|.+....   |..                 ...|+|++|+.++++.++++|+++++
T Consensus        88 drV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~  167 (374)
T 1cdo_A           88 EKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPL  167 (374)
T ss_dssp             CEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTCCH
T ss_pred             CEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEECCCCCCH
Confidence            9999999899999999999999999875432   110                 02499999999999999999999999


Q ss_pred             ccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCC
Q psy1413         294 EEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRN  371 (408)
Q Consensus       294 ~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~  371 (408)
                      ++++.++ ++.|+++++ +...+++++++||+|+|++|++++|+|+.+|+++|+++++++++++.++++|+++++|+++.
T Consensus       168 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~  247 (374)
T 1cdo_A          168 DTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDH  247 (374)
T ss_dssp             HHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGC
T ss_pred             HHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEecccc
Confidence            9999887 677888887 67889999999999999999999999999999779999999999999999999999987631


Q ss_pred             CChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         372 HSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                        .+++.+.+++++.+ ++|++||++|+..+++.+
T Consensus       248 --~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~  279 (374)
T 1cdo_A          248 --SEPISQVLSKMTNG-GVDFSLECVGNVGVMRNA  279 (374)
T ss_dssp             --SSCHHHHHHHHHTS-CBSEEEECSCCHHHHHHH
T ss_pred             --chhHHHHHHHHhCC-CCCEEEECCCCHHHHHHH
Confidence              13577888888875 899999999987666554

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=99.96  E-value=1.5e-29  Score=241.62  Aligned_cols=230  Identities=23%  Similarity=0.335  Sum_probs=173.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++|||++|++.+.+..++....++|.++|||++|+|+++|++|++|++||||++.+...                   
T Consensus        36 v~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~  115 (348)
T 2d8a_A           36 VLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTK  115 (348)
T ss_dssp             EEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCCC------------CE
T ss_pred             EeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCC
Confidence            4799999999998853121101246799999999999999999999999999999765322                   


Q ss_pred             --------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC-
Q psy1413          62 --------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH-  126 (408)
Q Consensus        62 --------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~-  126 (408)
                                    ..+...++..|+++++++++.+ .++.+++.+. ....+.+++++|+|+|++|++++|+++.+|+ 
T Consensus       116 ~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~  193 (348)
T 2d8a_A          116 IFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQ-EPLGNAVDTV-LAGPISGKSVLITGAGPLGLLGIAVAKASGAY  193 (348)
T ss_dssp             ETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTH-HHHHHHHHHH-TTSCCTTCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred             eecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhh-hHHHHHHHHH-HhcCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence                          2222344555666665333332 2333333221 1122278899999999999999998887664 


Q ss_pred             ------------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCCCc
Q psy1413         127 ------------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDV  161 (408)
Q Consensus       127 ------------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~  161 (408)
                                                                .++.+++++|...   +++++++++|+++.+|....+.
T Consensus       194 ~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~  273 (348)
T 2d8a_A          194 PVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKV  273 (348)
T ss_dssp             SEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCC
T ss_pred             EEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCc
Confidence                                                      2456677777532   6799999999999999877777


Q ss_pred             ccCH-HHHHhcCcEEEEeecCC--CcHHHHHHHHHcCCCCCCCceeeeec-cchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         162 KIPL-VLTMTKEIDIRGVFRYA--NDYPIALAMVASGKVDVKKLITHNYL-LEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       162 ~~~~-~~~~~~~~~l~g~~~~~--~~~~~~~~l~~~g~~~~~~~i~~~~~-l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      .++. ..++.|++++.|++...  ++++++++++++|++++.++++++|| |+|+++||+.+++  ...+|++++++
T Consensus       274 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~--~~~gKvvi~~~  348 (348)
T 2d8a_A          274 TIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA--GKTGKVVFMLK  348 (348)
T ss_dssp             CCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT--TCCSEEEEEC-
T ss_pred             ccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC--CCceEEEEeeC
Confidence            8888 78899999999987654  67999999999999999999999999 9999999999976  35788888753

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=99.96  E-value=2.6e-29  Score=239.75  Aligned_cols=225  Identities=16%  Similarity=0.245  Sum_probs=179.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++|||++|++.+. |..+..+.++|.++|||++|+|+++|++|++|++||||++.+...                   
T Consensus        32 v~a~gi~~~D~~~~~-g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~  110 (345)
T 3jv7_A           32 VTAAGLCHSDIFVMD-MPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAA  110 (345)
T ss_dssp             EEEEECCHHHHHHHH-SCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHH
T ss_pred             EEEEeeCHHHHHHHc-CCCCccCCCCCcccCcccEEEEEEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCcccc
Confidence            579999999999985 433334467899999999999999999999999999999764321                   


Q ss_pred             -------------------ccc-CCcceeccceeeecccccCCCCCCcceEEEEee--eeecCCeEEEEccCcccccccc
Q psy1413          62 -------------------NVC-LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHC--VGICGSDVHYLTHGQIGDFRLS  119 (408)
Q Consensus        62 -------------------~~~-~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~--~~~~g~~vlv~g~G~vG~~~i~  119 (408)
                                         ..+ ...++..|+ ++++++++++.++.+++.+....  .--.+++++|+|+|++|++++|
T Consensus       111 ~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~q  189 (345)
T 3jv7_A          111 DLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQ  189 (345)
T ss_dssp             HHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHH
T ss_pred             ccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH
Confidence                               222 445566677 77766667777777766443332  2235889999999999999999


Q ss_pred             cccccc-C-----------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEE
Q psy1413         120 DPMIVG-H-----------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIV  154 (408)
Q Consensus       120 ~a~~~G-~-----------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~  154 (408)
                      +++.+| .                                         .++.+++++|...   +++++|+++|+++.+
T Consensus       190 la~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~  269 (345)
T 3jv7_A          190 ILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVV  269 (345)
T ss_dssp             HHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred             HHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence            988763 2                                         3566788888752   789999999999999


Q ss_pred             ccCCC-CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         155 GAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       155 G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      |.... +.++++ .++.+++++.+++... ++++++++++++|++++   ++++|+|+|+++||+.+.+++. .+|+++.
T Consensus       270 G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~-~Gkvvv~  344 (345)
T 3jv7_A          270 GIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGSI-RGRGVVV  344 (345)
T ss_dssp             SCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHHHHHHHTTCCCC---CEEEECSTTHHHHHHHHHHTCC-SSEEEEC
T ss_pred             CCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCce---EEEEEcHHHHHHHHHHHHcCCC-ceeEEeC
Confidence            98766 777775 8889999999998887 88999999999999986   5699999999999999999765 4566554

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=99.96  E-value=1.7e-28  Score=236.72  Aligned_cols=236  Identities=29%  Similarity=0.433  Sum_probs=195.4

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ +..++|.+.+.++++.+.++++++.++.+.. |...   ..++..+|.|+.|+|..+|+..+.++.          
T Consensus        21 l~~-~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~---~~~P~v~GhE~~G~V~~vG~~v~~~~v----------   85 (374)
T 2jhf_A           21 FSI-EEVEVAPPKAHEVRIKMVATGICRSDDHVVS-GTLV---TPLPVIAGHEAAGIVESIGEGVTTVRP----------   85 (374)
T ss_dssp             CEE-EEEEECCCCTTEEEEEEEEEECCHHHHHHHH-TSSC---CCSSBCCCCSEEEEEEEECTTCCSCCT----------
T ss_pred             eEE-EEccCCCCCCCeEEEEEeEEeechhhHHHHc-CCCC---CCCCcccCcCceEEEEEECCCCCCCCC----------
Confidence            556 5667788888999999999999988776542 2111   125778999999999999976544444          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    +|
T Consensus        86 ------------------------------------------------------------------------------Gd   87 (374)
T 2jhf_A           86 ------------------------------------------------------------------------------GD   87 (374)
T ss_dssp             ------------------------------------------------------------------------------TC
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          99


Q ss_pred             ceeecCCCcccccccccCCccccccceeec---ccC-----------------CCCccceeEEeeccceeeeCCCCCCcc
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---ATP-----------------PDHGNLSRYYRHAADFCHKLPDHVSLE  294 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~~~~~  294 (408)
                      +|...+..+|+.|.+|++|++++|.+....   |..                 ...|+|++|+.++++.++++|++++++
T Consensus        88 rV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~  167 (374)
T 2jhf_A           88 KVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLE  167 (374)
T ss_dssp             EEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTCCHH
T ss_pred             EEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCCCCCHH
Confidence            999999899999999999999999875432   110                 125999999999999999999999999


Q ss_pred             cccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCC
Q psy1413         295 EGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNH  372 (408)
Q Consensus       295 ~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~  372 (408)
                      +++.++ ++.|+++++ +...+++++++||+|+|++|++++|+++.+|+++|+++++++++++.++++|+++++|+++. 
T Consensus       168 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-  246 (374)
T 2jhf_A          168 KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-  246 (374)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGC-
T ss_pred             HhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEeccccc-
Confidence            999887 677888887 66889999999999999999999999999999779999999999999999999999987631 


Q ss_pred             ChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         373 SLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                       .+++.+.+++++.+ ++|++|||+|+..+++.+
T Consensus       247 -~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~  278 (374)
T 2jhf_A          247 -KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTA  278 (374)
T ss_dssp             -SSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHH
T ss_pred             -chhHHHHHHHHhCC-CCcEEEECCCCHHHHHHH
Confidence             13577788888865 899999999987766654

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=99.96  E-value=7.5e-30  Score=248.06  Aligned_cols=227  Identities=21%  Similarity=0.227  Sum_probs=175.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------   62 (408)
                      |+++|||++|++.+. |.   ++.++|.++|||++|+|+++|++|++|++||||++.+...|                  
T Consensus        39 v~a~gic~~D~~~~~-G~---~~~~~p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~  114 (398)
T 2dph_A           39 VVSTNICGSDQHIYR-GR---FIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNL  114 (398)
T ss_dssp             EEEEECCHHHHHHHT-TS---SCCCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTT
T ss_pred             EEEEeecHHHHHHhc-CC---CCCCCCcccCCceEEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCcc
Confidence            579999999999985 32   34578999999999999999999999999999987542211                  


Q ss_pred             --------------------------ccCC--cceeccceeeecc----cccCCCCCCcceEEEEeeeee-cCCeEEEEc
Q psy1413          63 --------------------------VCLS--PILRRRFSLRFRE----QKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT  109 (408)
Q Consensus        63 --------------------------~~~~--~~~~~p~~~~~~~----~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g  109 (408)
                                                .+..  .++..|+++++++    .+.++.++.+++.+. ....+ .+++|+|+|
T Consensus       115 ~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G  193 (398)
T 2dph_A          115 VNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAG  193 (398)
T ss_dssp             TCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEEC
T ss_pred             ccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEEC
Confidence                                      1111  3455566666643    455555555554332 22233 588999999


Q ss_pred             cCccccccccccccccC-------------------------------------------cceeEEEccCch--------
Q psy1413         110 HGQIGDFRLSDPMIVGH-------------------------------------------EASGIVSKVGAK--------  138 (408)
Q Consensus       110 ~G~vG~~~i~~a~~~G~-------------------------------------------~~~~vv~~~g~~--------  138 (408)
                      +|++|++++|+++.+|+                                           .++.+++++|..        
T Consensus       194 aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~  273 (398)
T 2dph_A          194 AGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEA  273 (398)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGT
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccc
Confidence            99999999988876554                                           245678888753        


Q ss_pred             ---------HHHHhhccCCcEEEEEccC-------------CCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcC
Q psy1413         139 ---------VKHLKATRPGGCLVIVGAG-------------SQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASG  195 (408)
Q Consensus       139 ---------~~~~~~l~~gG~iv~~G~~-------------~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g  195 (408)
                               .+++++|+++|+++.+|..             ..+..++...++.|++++.++.... ++++++++++++|
T Consensus       274 ~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g  353 (398)
T 2dph_A          274 NTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWD  353 (398)
T ss_dssp             TSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTT
T ss_pred             cccccHHHHHHHHHHHhcCCEEEEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcC
Confidence                     3689999999999999976             2345677778899999999987655 7799999999999


Q ss_pred             CCC--CCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         196 KVD--VKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       196 ~~~--~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      +++  +.++++++|+|+|+++||+.+.+++.  +|++++.+
T Consensus       354 ~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--gKvvv~~~  392 (398)
T 2dph_A          354 QMPYLSKVMNIEVITLDQAPDGYAKFDKGSP--AKFVIDPH  392 (398)
T ss_dssp             CCHHHHHHHCEEEECSTTHHHHHHHHHTTCS--CEEEECTT
T ss_pred             CCCccchhhEEEEEcHHHHHHHHHHHhcCCc--eEEEEecC
Confidence            999  88899999999999999999988764  89988765

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=99.96  E-value=3.5e-29  Score=241.42  Aligned_cols=227  Identities=19%  Similarity=0.230  Sum_probs=170.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------   62 (408)
                      |+++|||++|++++. |..+  ..++|.++|||++|+|+++|++|++|++||||++.+...|                  
T Consensus        38 v~a~gi~~~D~~~~~-g~~~--~~~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~  114 (373)
T 2fzw_A           38 IIATAVCHTDAYTLS-GADP--EGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIR  114 (373)
T ss_dssp             EEEEECCHHHHHHHH-TCCT--TCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTH
T ss_pred             EEEEEEchhhHHHhc-CCCC--CCCCCccccccccEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcc
Confidence            579999999999885 4221  2467999999999999999999999999999987653211                  


Q ss_pred             ------------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeE
Q psy1413          63 ------------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDV  105 (408)
Q Consensus        63 ------------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~v  105 (408)
                                                          .+...++..|+++++++++.++.++.+++.+......+ .+++|
T Consensus       115 ~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V  194 (373)
T 2fzw_A          115 VTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVC  194 (373)
T ss_dssp             HHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEE
T ss_pred             cccccccccCCcccccccccccccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEE
Confidence                                                11223444566666544455544444443221111222 47899


Q ss_pred             EEEccCccccccccccccccC--------------------------------------------cceeEEEccCch---
Q psy1413         106 HYLTHGQIGDFRLSDPMIVGH--------------------------------------------EASGIVSKVGAK---  138 (408)
Q Consensus       106 lv~g~G~vG~~~i~~a~~~G~--------------------------------------------~~~~vv~~~g~~---  138 (408)
                      +|+|+|++|++++|+++.+|+                                            .++.+++++|..   
T Consensus       195 lV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~  274 (373)
T 2fzw_A          195 AVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVM  274 (373)
T ss_dssp             EEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHH
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHH
Confidence            999999999999998887664                                            135567777653   


Q ss_pred             HHHHhhccCC-cEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413         139 VKHLKATRPG-GCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLED  211 (408)
Q Consensus       139 ~~~~~~l~~g-G~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~  211 (408)
                      .+++++++++ |+++.+|....  +.+++...++.++ ++.|++..    .++++++++++++|++++.++++++|||+|
T Consensus       275 ~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~  353 (373)
T 2fzw_A          275 RAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDE  353 (373)
T ss_dssp             HHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGG
T ss_pred             HHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHH
Confidence            2679999999 99999997653  4677777888888 99998643    257999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCceEEEEEc
Q psy1413         212 TLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       212 ~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      +++||+.+.+++.  .|+++++
T Consensus       354 ~~~A~~~~~~~~~--~kvvi~~  373 (373)
T 2fzw_A          354 INKAFELMHSGKS--IRTVVKI  373 (373)
T ss_dssp             HHHHHHHHHHTCC--SEEEEEC
T ss_pred             HHHHHHHHhCCCc--ceEEEeC
Confidence            9999999988753  6888763

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=99.95  E-value=7.2e-29  Score=241.24  Aligned_cols=236  Identities=28%  Similarity=0.422  Sum_probs=193.6

Q ss_pred             ceeccceeeecccccCCCCC-Ccc------eEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHH
Q psy1413          68 ILRRRFSLRFREQKPIEDPD-DHE------VLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK  140 (408)
Q Consensus        68 ~~~~p~~~~~~~~~~lp~~~-~~~------~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~  140 (408)
                      ++..+..+.+ +..+.|.+. +.+      +++.+.++++++.++.+.. |.   .....+..+|+|+.|+|..+|+..+
T Consensus         7 ~~~~~~~l~~-~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~-g~---~~~~~p~v~GhE~~G~V~~vG~~v~   81 (398)
T 1kol_A            7 VYLGSGKVEV-QKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVR-GR---TTAQVGLVLGHEITGEVIEKGRDVE   81 (398)
T ss_dssp             EEEETTEEEE-EEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHT-TC---SCCCTTCBCCCCEEEEEEEECTTCC
T ss_pred             EEecCCceEE-EEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHc-CC---CCCCCCcccCcccEEEEEEECCCCC
Confidence            3445666777 667778775 677      9999999999988776542 21   1234567889999999999997654


Q ss_pred             HHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHH
Q psy1413         141 HLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAK  220 (408)
Q Consensus       141 ~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~  220 (408)
                      .++.                                                                            
T Consensus        82 ~~~v----------------------------------------------------------------------------   85 (398)
T 1kol_A           82 NLQI----------------------------------------------------------------------------   85 (398)
T ss_dssp             SCCT----------------------------------------------------------------------------
T ss_pred             cCCC----------------------------------------------------------------------------
Confidence            4444                                                                            


Q ss_pred             cCCCCceEEEEEcCceeecCCCcccccccccCCcccccccee------ecccC---CCCccceeEEeeccc--eeeeCCC
Q psy1413         221 TGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIF------FCATP---PDHGNLSRYYRHAAD--FCHKLPD  289 (408)
Q Consensus       221 ~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~g~~~~~~~~~~~--~~~~~p~  289 (408)
                                  +|+|...+..+|+.|.+|++|++++|.+..      .+|..   ...|+|++|++++++  .++++|+
T Consensus        86 ------------GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~  153 (398)
T 1kol_A           86 ------------GDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPD  153 (398)
T ss_dssp             ------------TCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSC
T ss_pred             ------------CCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCC
Confidence                        999998888899999999999999998753      23431   346999999999987  8999999


Q ss_pred             CCCccc----ccccc-hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCe
Q psy1413         290 HVSLEE----GALLE-PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADA  364 (408)
Q Consensus       290 ~~~~~~----aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~  364 (408)
                      ++++++    ++.++ ++.|+|+++.+..+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++ 
T Consensus       154 ~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-  232 (398)
T 1kol_A          154 RDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-  232 (398)
T ss_dssp             HHHHHHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-
T ss_pred             CcchhhhcccccccccHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-
Confidence            998876    45555 788999999888999999999999999999999999999998799999999999999999997 


Q ss_pred             EEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         365 TVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       365 ~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ++++++.   +++.+.++++++++++|++|||+|+.
T Consensus       233 ~i~~~~~---~~~~~~v~~~t~g~g~Dvvid~~G~~  265 (398)
T 1kol_A          233 IADLSLD---TPLHEQIAALLGEPEVDCAVDAVGFE  265 (398)
T ss_dssp             EEETTSS---SCHHHHHHHHHSSSCEEEEEECCCTT
T ss_pred             EEccCCc---chHHHHHHHHhCCCCCCEEEECCCCc
Confidence            7887651   23678888899888999999999976

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=99.95  E-value=5.4e-28  Score=231.21  Aligned_cols=126  Identities=25%  Similarity=0.279  Sum_probs=115.3

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI  346 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~  346 (408)
                      +|+|++|+.++++.++++|+++++++++.++ ++.|+++++ +...+++++++||+|+ |++|++++|+++.+|++ |++
T Consensus       119 ~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~-Vi~  197 (353)
T 4dup_A          119 GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAE-VYA  197 (353)
T ss_dssp             SCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEE
T ss_pred             CCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE-EEE
Confidence            3789999999999999999999999998776 788899998 6789999999999987 99999999999999996 999


Q ss_pred             EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      +++++++++.++++|++.++++++    +++.+.+++++ ++++|++|||+|+..
T Consensus       198 ~~~~~~~~~~~~~lGa~~~~~~~~----~~~~~~~~~~~-~~g~Dvvid~~g~~~  247 (353)
T 4dup_A          198 TAGSTGKCEACERLGAKRGINYRS----EDFAAVIKAET-GQGVDIILDMIGAAY  247 (353)
T ss_dssp             EESSHHHHHHHHHHTCSEEEETTT----SCHHHHHHHHH-SSCEEEEEESCCGGG
T ss_pred             EeCCHHHHHHHHhcCCCEEEeCCc----hHHHHHHHHHh-CCCceEEEECCCHHH
Confidence            999999999999999999999887    77888888888 789999999999763

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=99.95  E-value=3.3e-29  Score=240.02  Aligned_cols=226  Identities=18%  Similarity=0.228  Sum_probs=172.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |+++|||++|++.+. |.++  ...+|.++|||++|+|+++|++|++|++||||++.+.                     
T Consensus        41 v~a~gi~~~D~~~~~-g~~~--~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~  117 (357)
T 2cf5_A           41 IICCGICHTDLHQTK-NDLG--MSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKK  117 (357)
T ss_dssp             EEEEEECHHHHHHHT-CTTT--CCCSSBCCCCEEEEEEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTC
T ss_pred             EEEEeecchhhhhhc-CCCC--CCCCCeecCcceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCc
Confidence            579999999999985 3222  2467999999999999999999999999999986431                     


Q ss_pred             --------------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccc
Q psy1413          60 --------------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRL  118 (408)
Q Consensus        60 --------------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i  118 (408)
                                          |...+...++..|++++++++++++....+++.+....... .+++|+|+|+|++|++++
T Consensus       118 ~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~  197 (357)
T 2cf5_A          118 IWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGV  197 (357)
T ss_dssp             EETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHH
T ss_pred             cccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHH
Confidence                                11223335566677777755566665544444221111112 588999999999999999


Q ss_pred             cccccccC--------------------------------------cceeEEEccCch---HHHHhhccCCcEEEEEccC
Q psy1413         119 SDPMIVGH--------------------------------------EASGIVSKVGAK---VKHLKATRPGGCLVIVGAG  157 (408)
Q Consensus       119 ~~a~~~G~--------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~  157 (408)
                      |+++.+|+                                      .++.+++++|..   .+++++++++|+++.+|..
T Consensus       198 qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~  277 (357)
T 2cf5_A          198 KIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVI  277 (357)
T ss_dssp             HHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCC
T ss_pred             HHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCC
Confidence            98876664                                      246677888753   3789999999999999987


Q ss_pred             CCCcc-cCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         158 SQDVK-IPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       158 ~~~~~-~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ..+.. ++.. ++.|++++.|++... ++++++++++++|++++.  + ++|||+|+++||+.+.+++ ..+|++++.+
T Consensus       278 ~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~-~~gKvvi~~~  351 (357)
T 2cf5_A          278 NNPLQFLTPL-LMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSI--I-EVVKMDYVNTAFERLEKND-VRYRFVVDVE  351 (357)
T ss_dssp             SSCCCCCHHH-HHHHTCEEEECCSCCHHHHHHHHHHHHHTTCCCC--E-EEEEGGGHHHHHHHHHTTC-SSSEEEEETT
T ss_pred             CCCccccCHH-HHhCccEEEEEccCCHHHHHHHHHHHHcCCCCCc--e-EEEeHHHHHHHHHHHHCCC-CceEEEEeCC
Confidence            65554 6666 899999999998776 789999999999999764  4 7999999999999998875 3568888764

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=99.95  E-value=1.3e-28  Score=234.48  Aligned_cols=235  Identities=25%  Similarity=0.388  Sum_probs=198.9

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ ++.++|.+.+.++++.+.++++++.++.+.. |... ....++..+|.|+.|+|..+|+..+.++.         
T Consensus        14 ~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~-~~~~~P~v~G~E~~G~V~~vG~~v~~~~v---------   81 (340)
T 3s2e_A           14 PLTI-DEVPVPQPGPGQVQVKIEASGVCHTDLHAAD-GDWP-VKPTLPFIPGHEGVGYVSAVGSGVSRVKE---------   81 (340)
T ss_dssp             CCEE-EEEECCCCCTTCEEEEEEEEEECHHHHHHHH-TCSS-SCCCSSBCCCSEEEEEEEEECSSCCSCCT---------
T ss_pred             CCEE-EEccCCCCCCCeEEEEEEEeccCHHHHHHHc-CCCC-CCCCCCcccCCcceEEEEEECCCCCcCCC---------
Confidence            3666 6678888899999999999999988776542 2111 11346778999999999999976544544         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        82 -------------------------------------------------------------------------------G   82 (340)
T 3s2e_A           82 -------------------------------------------------------------------------------G   82 (340)
T ss_dssp             -------------------------------------------------------------------------------T
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             Ccee-ecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         234 DRVA-IEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       234 ~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      |+|. ..+..+|+.|..|.+|+++.|.+....|.. .+|+|++|+.++++.++++|+++++++++.++ ...|+|++++.
T Consensus        83 drV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~  161 (340)
T 3s2e_A           83 DRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYS-VNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKV  161 (340)
T ss_dssp             CEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTT-BCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHHHT
T ss_pred             CEEEecCCCCCCCCChHHhCcCcccCccccccCCC-CCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHHHH
Confidence            9994 456678999999999999999998888764 67999999999999999999999999999777 66788999988


Q ss_pred             cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ..+++++++||+|+|++|++++|+++.+|++ |++++++++|++.++++|++.++|+++    ++..+.+++ +.+ ++|
T Consensus       162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~~i~~~~----~~~~~~~~~-~~g-~~d  234 (340)
T 3s2e_A          162 TDTRPGQWVVISGIGGLGHVAVQYARAMGLR-VAAVDIDDAKLNLARRLGAEVAVNARD----TDPAAWLQK-EIG-GAH  234 (340)
T ss_dssp             TTCCTTSEEEEECCSTTHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTCSEEEETTT----SCHHHHHHH-HHS-SEE
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHcCCCEEEeCCC----cCHHHHHHH-hCC-CCC
Confidence            8999999999999999999999999999995 999999999999999999999999987    667777777 445 899


Q ss_pred             eEEEcccchhhhhhcC
Q psy1413         392 KTIDCSGIESTIKLGM  407 (408)
Q Consensus       392 ~i~d~~g~~~~~~~~~  407 (408)
                      ++||++|+..+++.++
T Consensus       235 ~vid~~g~~~~~~~~~  250 (340)
T 3s2e_A          235 GVLVTAVSPKAFSQAI  250 (340)
T ss_dssp             EEEESSCCHHHHHHHH
T ss_pred             EEEEeCCCHHHHHHHH
Confidence            9999999887776553

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=99.95  E-value=7e-28  Score=229.83  Aligned_cols=130  Identities=19%  Similarity=0.207  Sum_probs=113.9

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcC------CCCEEEEEec-chhHHHHHHHHHHhC
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVT------LGSKVLITGA-GPIGLVTLLTARALG  340 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~------~~~~~lv~G~-G~~G~~~~~~~~~~G  340 (408)
                      +|+|++|+.++++.++++|+++++++++.++ ...|+|+++ +...++      +++++||+|+ |++|++++|+++.+|
T Consensus        96 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~G  175 (346)
T 3fbg_A           96 NGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYG  175 (346)
T ss_dssp             CCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTT
T ss_pred             CcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999887 455788887 567777      8999999976 999999999999999


Q ss_pred             CCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       341 a~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      ++ |+++++++++++.++++|++.++++++     ++.+.++++ .++++|++|||+|+...++.+
T Consensus       176 a~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~-----~~~~~~~~~-~~~g~Dvv~d~~g~~~~~~~~  234 (346)
T 3fbg_A          176 LR-VITTASRNETIEWTKKMGADIVLNHKE-----SLLNQFKTQ-GIELVDYVFCTFNTDMYYDDM  234 (346)
T ss_dssp             CE-EEEECCSHHHHHHHHHHTCSEEECTTS-----CHHHHHHHH-TCCCEEEEEESSCHHHHHHHH
T ss_pred             CE-EEEEeCCHHHHHHHHhcCCcEEEECCc-----cHHHHHHHh-CCCCccEEEECCCchHHHHHH
Confidence            95 999999999999999999999998864     366667777 567999999999988776654

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.95  E-value=3.8e-29  Score=240.45  Aligned_cols=227  Identities=19%  Similarity=0.187  Sum_probs=170.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------------   60 (408)
                      |+++|||++|++.+. |.++  ..++|.++|||++|+|+++|++|++|++||||++.+..                    
T Consensus        54 v~a~gi~~~D~~~~~-g~~~--~~~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~  130 (369)
T 1uuf_A           54 IAYCGVCHSDLHQVR-SEWA--GTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHM  130 (369)
T ss_dssp             EEEEECCHHHHHHHH-CTTS--CCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTC
T ss_pred             EEEEeecHHHHHHhc-CCCC--CCCCCeecccCceEEEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcch
Confidence            579999999999985 3222  23679999999999999999999999999999864321                    


Q ss_pred             ----------------------ccccCCcceeccce-eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccc
Q psy1413          61 ----------------------RNVCLSPILRRRFS-LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDF  116 (408)
Q Consensus        61 ----------------------~~~~~~~~~~~p~~-~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~  116 (408)
                                            ...+...++..|++ ++++++++++.+..+++.+... ..+ .+++|+|+|+|++|++
T Consensus       131 ~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~  209 (369)
T 1uuf_A          131 TGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHM  209 (369)
T ss_dssp             EETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHH
T ss_pred             hcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHH
Confidence                                  11222345566777 7775555566554444422111 122 5889999999999999


Q ss_pred             cccccccccC-------------------------------------cceeEEEccCch---HHHHhhccCCcEEEEEcc
Q psy1413         117 RLSDPMIVGH-------------------------------------EASGIVSKVGAK---VKHLKATRPGGCLVIVGA  156 (408)
Q Consensus       117 ~i~~a~~~G~-------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~  156 (408)
                      ++|+++.+|+                                     .++.+++++|..   .+++++++++|+++.+|.
T Consensus       210 aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~  289 (369)
T 1uuf_A          210 GIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGA  289 (369)
T ss_dssp             HHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCC
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHHHHHHHHHhccCCEEEEecc
Confidence            9999887775                                     246677777753   368999999999999998


Q ss_pred             CCCCc-ccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         157 GSQDV-KIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       157 ~~~~~-~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ...+. .++...+++|++++.|++... ++++++++++++|++++.  + ++|||+|+++||+.+.+++. .+|++++.+
T Consensus       290 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~-~gKvvi~~~  365 (369)
T 1uuf_A          290 PATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVAD--I-EMIRADQINEAYERMLRGDV-KYRFVIDNR  365 (369)
T ss_dssp             C-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCCCC--E-EEECGGGHHHHHHHHHTTCS-SSEEEEEGG
T ss_pred             CCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCCcc--e-EEEcHHHHHHHHHHHHcCCC-ceEEEEecC
Confidence            76655 678888999999999998776 789999999999998754  4 57999999999999987653 678888765


Q ss_pred             c
Q psy1413         235 R  235 (408)
Q Consensus       235 ~  235 (408)
                      .
T Consensus       366 ~  366 (369)
T 1uuf_A          366 T  366 (369)
T ss_dssp             G
T ss_pred             C
Confidence            4

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=99.95  E-value=2.2e-28  Score=235.85  Aligned_cols=238  Identities=29%  Similarity=0.430  Sum_probs=196.2

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ +..++|.+.+.++++.+.++++++.++.+.. |...  ...++..+|+|+.|+|..+|+..+.++.         
T Consensus        18 ~l~~-~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~--~~~~P~v~GhE~~G~V~~vG~~V~~~~v---------   84 (373)
T 2fzw_A           18 PLSI-EEIEVAPPKAHEVRIKIIATAVCHTDAYTLS-GADP--EGCFPVILGHLGAGIVESVGEGVTKLKA---------   84 (373)
T ss_dssp             CCEE-EEEEECCCCTTEEEEEEEEEECCHHHHHHHH-TCCT--TCCSSBCCCCEEEEEEEEECTTCCSCCT---------
T ss_pred             CcEE-EEeeCCCCCCCEEEEEEEEEEEchhhHHHhc-CCCC--CCCCCccccccccEEEEEECCCCCCCCC---------
Confidence            3556 5667788888999999999999988776542 2111  1345778999999999999976544444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        85 -------------------------------------------------------------------------------G   85 (373)
T 2fzw_A           85 -------------------------------------------------------------------------------G   85 (373)
T ss_dssp             -------------------------------------------------------------------------------T
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           9


Q ss_pred             CceeecCCCcccccccccCCccccccceeec---ccC-----------------CCCccceeEEeeccceeeeCCCCCCc
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---ATP-----------------PDHGNLSRYYRHAADFCHKLPDHVSL  293 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~~~~  293 (408)
                      |+|...+..+|++|.+|+.|++++|.+....   |..                 ...|+|++|+.++++.++++|+++++
T Consensus        86 drV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~  165 (373)
T 2fzw_A           86 DTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPL  165 (373)
T ss_dssp             CEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCH
T ss_pred             CEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCCCCCH
Confidence            9999999899999999999999999875321   110                 13599999999999999999999999


Q ss_pred             ccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCC
Q psy1413         294 EEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRN  371 (408)
Q Consensus       294 ~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~  371 (408)
                      ++++.++ ++.|+++++ +...+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++++++.
T Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~  245 (373)
T 2fzw_A          166 DKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF  245 (373)
T ss_dssp             HHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGC
T ss_pred             HHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccc
Confidence            9999887 677888887 67889999999999999999999999999999779999999999999999999999987631


Q ss_pred             CChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         372 HSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                        .+++.+.+++++.+ ++|++|||+|+..+++.+
T Consensus       246 --~~~~~~~v~~~~~~-g~D~vid~~g~~~~~~~~  277 (373)
T 2fzw_A          246 --SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAA  277 (373)
T ss_dssp             --SSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHH
T ss_pred             --cccHHHHHHHHhCC-CCCEEEECCCcHHHHHHH
Confidence              14577888888875 999999999987766554

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=99.95  E-value=6.5e-29  Score=238.70  Aligned_cols=227  Identities=18%  Similarity=0.199  Sum_probs=174.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |+++|||++|++.+. |.++  ...+|.++|||++|+|+++|++|++|++||||++.+.                     
T Consensus        48 v~a~gi~~~D~~~~~-g~~~--~~~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~  124 (366)
T 1yqd_A           48 VLYCGVCHSDLHSIK-NDWG--FSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM  124 (366)
T ss_dssp             EEEEEECHHHHHHHH-TSSS--CCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTC
T ss_pred             EEEEeechhhHHHHc-CCCC--CCCCCEecccceEEEEEEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcc
Confidence            579999999999985 3222  2467999999999999999999999999999986331                     


Q ss_pred             --------------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccc
Q psy1413          60 --------------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRL  118 (408)
Q Consensus        60 --------------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i  118 (408)
                                          +...+...++..|++++++++++++....+++.+....... .+++|+|+|+|++|++++
T Consensus       125 ~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~  204 (366)
T 1yqd_A          125 ILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAV  204 (366)
T ss_dssp             EESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHH
T ss_pred             cccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHH
Confidence                                11222334556677777755566665544444221111112 688999999999999999


Q ss_pred             cccccccC--------------------------------------cceeEEEccCch---HHHHhhccCCcEEEEEccC
Q psy1413         119 SDPMIVGH--------------------------------------EASGIVSKVGAK---VKHLKATRPGGCLVIVGAG  157 (408)
Q Consensus       119 ~~a~~~G~--------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~  157 (408)
                      |+++.+|+                                      .++.+++++|..   .+++++++++|+++.+|..
T Consensus       205 q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~  284 (366)
T 1yqd_A          205 KFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAP  284 (366)
T ss_dssp             HHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccC
Confidence            98876664                                      245667777743   3789999999999999987


Q ss_pred             CCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         158 SQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       158 ~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ..+.+++...++.|++++.|++... ++++++++++++|++++.  + ++|||+|+++||+.+.+++. .+|++++.+
T Consensus       285 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~-~gKvvl~~~  358 (366)
T 1yqd_A          285 EKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITAD--I-EVISTDYLNTAMERLAKNDV-RYRFVIDVG  358 (366)
T ss_dssp             SSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCC-SSEEEECHH
T ss_pred             CCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCCCc--e-EEEcHHHHHHHHHHHHcCCc-ceEEEEEcc
Confidence            7777788888999999999998776 789999999999999764  4 79999999999999998754 578887653

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=99.95  E-value=1.8e-27  Score=229.02  Aligned_cols=130  Identities=21%  Similarity=0.225  Sum_probs=114.3

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hc-cCc-----------CCCCEEEEEec-chhHHHHHH
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RR-AGV-----------TLGSKVLITGA-GPIGLVTLL  334 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~-~~~-----------~~~~~~lv~G~-G~~G~~~~~  334 (408)
                      +|+|++|+.++++.++++|+++++++++.++ ...|+++++ .. ..+           ++++++||+|+ |++|++++|
T Consensus       104 ~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~q  183 (371)
T 3gqv_A          104 QGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQ  183 (371)
T ss_dssp             CCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHH
T ss_pred             CCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHH
Confidence            5899999999999999999999999999887 456788888 33 332           89999999999 999999999


Q ss_pred             HHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         335 TARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       335 ~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      +++.+|++ |+++. +++|++.++++|+++++|+++    +++.+.+++++++ ++|++|||+|++.+++.+
T Consensus       184 la~~~Ga~-Vi~~~-~~~~~~~~~~lGa~~vi~~~~----~~~~~~v~~~t~g-~~d~v~d~~g~~~~~~~~  248 (371)
T 3gqv_A          184 MLRLSGYI-PIATC-SPHNFDLAKSRGAEEVFDYRA----PNLAQTIRTYTKN-NLRYALDCITNVESTTFC  248 (371)
T ss_dssp             HHHHTTCE-EEEEE-CGGGHHHHHHTTCSEEEETTS----TTHHHHHHHHTTT-CCCEEEESSCSHHHHHHH
T ss_pred             HHHHCCCE-EEEEe-CHHHHHHHHHcCCcEEEECCC----chHHHHHHHHccC-CccEEEECCCchHHHHHH
Confidence            99999996 77775 789999999999999999987    7888999999976 499999999998776654

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=99.95  E-value=1.3e-28  Score=239.27  Aligned_cols=235  Identities=30%  Similarity=0.483  Sum_probs=194.7

Q ss_pred             ceeccceeeecccccCCCC-CC-----cceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHH
Q psy1413          68 ILRRRFSLRFREQKPIEDP-DD-----HEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH  141 (408)
Q Consensus        68 ~~~~p~~~~~~~~~~lp~~-~~-----~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~  141 (408)
                      ++..|..+.+ +..+.|.+ .+     .++++.+.++++++.++.+.. |.   .....+..+|+|+.|+|+.+|+..+.
T Consensus         7 ~~~~~~~l~~-~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~-G~---~~~~~p~v~GhE~~G~V~~vG~~v~~   81 (398)
T 2dph_A            7 VYHGTRDLRV-ETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR-GR---FIVPKGHVLGHEITGEVVEKGSDVEL   81 (398)
T ss_dssp             EEEETTEEEE-EEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHT-TS---SCCCTTCBCCCCEEEEEEEECTTCCS
T ss_pred             EEEcCCCEEE-EEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhc-CC---CCCCCCcccCCceEEEEEEECCCCCC
Confidence            4455667777 56777776 46     889999999999988776642 21   22355778999999999999976444


Q ss_pred             HhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHc
Q psy1413         142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKT  221 (408)
Q Consensus       142 ~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~  221 (408)
                      ++.                                                                             
T Consensus        82 ~~v-----------------------------------------------------------------------------   84 (398)
T 2dph_A           82 MDI-----------------------------------------------------------------------------   84 (398)
T ss_dssp             CCT-----------------------------------------------------------------------------
T ss_pred             CCC-----------------------------------------------------------------------------
Confidence            444                                                                             


Q ss_pred             CCCCceEEEEEcCceeecCCCcccccccccCCccccccc--e------eeccc--CCCCccceeEEeeccc--eeeeCCC
Q psy1413         222 GAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQ--I------FFCAT--PPDHGNLSRYYRHAAD--FCHKLPD  289 (408)
Q Consensus       222 ~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~--~~~~g~~~~~~~~~~~--~~~~~p~  289 (408)
                                 +|+|...+..+|+.|.+|.+|++++|.+  .      ..+|.  ...+|+|++|++++++  .++++|+
T Consensus        85 -----------GDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~  153 (398)
T 2dph_A           85 -----------GDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGD  153 (398)
T ss_dssp             -----------TCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSS
T ss_pred             -----------CCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCC
Confidence                       9999999989999999999999999987  1      13332  2357999999999987  8999999


Q ss_pred             CCCccc----ccccc-hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCe
Q psy1413         290 HVSLEE----GALLE-PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADA  364 (408)
Q Consensus       290 ~~~~~~----aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~  364 (408)
                      ++++++    ++.++ ++.|+|+++++..+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++ 
T Consensus       154 ~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-  232 (398)
T 2dph_A          154 KEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE-  232 (398)
T ss_dssp             HHHHHHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE-
T ss_pred             CCChhhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc-
Confidence            999887    66665 788999999888999999999999999999999999999996799999999999999999996 


Q ss_pred             EEecCCCCChHHH-HHHHHHHhcCCCCceEEEcccch
Q psy1413         365 TVLIDRNHSLEEI-STHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       365 ~i~~~~~~~~~~~-~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ++++++    ++. .+.++++++++++|++|||+|+.
T Consensus       233 ~i~~~~----~~~~~~~~~~~~~g~g~Dvvid~~g~~  265 (398)
T 2dph_A          233 TIDLRN----SAPLRDQIDQILGKPEVDCGVDAVGFE  265 (398)
T ss_dssp             EEETTS----SSCHHHHHHHHHSSSCEEEEEECSCTT
T ss_pred             EEcCCC----cchHHHHHHHHhCCCCCCEEEECCCCc
Confidence            888876    454 77788888877999999999976

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=99.95  E-value=8.7e-28  Score=228.88  Aligned_cols=123  Identities=24%  Similarity=0.304  Sum_probs=111.3

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI  346 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~  346 (408)
                      +|+|++|+.++++.++++|+++++++++.++ ...|+|+++ ++..+++++++||+|+ |++|++++|+++.+|++ |++
T Consensus       102 ~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~-Vi~  180 (343)
T 3gaz_A          102 QGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGAR-VFA  180 (343)
T ss_dssp             CCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEE
T ss_pred             CcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCE-EEE
Confidence            5899999999999999999999999999887 566888888 7889999999999997 99999999999999996 888


Q ss_pred             EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      + +++++++.++++|++. ++ ++    +++.+.+++++.++++|++|||+|++
T Consensus       181 ~-~~~~~~~~~~~lGa~~-i~-~~----~~~~~~~~~~~~~~g~D~vid~~g~~  227 (343)
T 3gaz_A          181 T-ARGSDLEYVRDLGATP-ID-AS----REPEDYAAEHTAGQGFDLVYDTLGGP  227 (343)
T ss_dssp             E-ECHHHHHHHHHHTSEE-EE-TT----SCHHHHHHHHHTTSCEEEEEESSCTH
T ss_pred             E-eCHHHHHHHHHcCCCE-ec-cC----CCHHHHHHHHhcCCCceEEEECCCcH
Confidence            8 8899999999999998 77 54    66788888999888999999999974

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=99.95  E-value=6.7e-29  Score=237.91  Aligned_cols=235  Identities=21%  Similarity=0.354  Sum_probs=194.5

Q ss_pred             eeccce-eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccc---cccccCcceeEEEccCchHHHHhh
Q psy1413          69 LRRRFS-LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD---PMIVGHEASGIVSKVGAKVKHLKA  144 (408)
Q Consensus        69 ~~~p~~-~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~---a~~~G~~~~~vv~~~g~~~~~~~~  144 (408)
                      +..+.. +.+ +..+.|.+.+.++++.+.++++++.++.+.. |...  ....   +..+|+|+.| |..+|+. +.++.
T Consensus         6 ~~~~~~~l~~-~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~--~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~v   79 (357)
T 2b5w_A            6 VKRGEDRPVV-IEKPRPEPESGEALVRTLRVGVCGTDHEVIA-GGHG--GFPEGEDHLVLGHEAVG-VVVDPND-TELEE   79 (357)
T ss_dssp             EETTCSSCEE-EECCCCCCCTTEEEEEEEEEEECHHHHHHHH-SCST--TSCTTCSEEECCSEEEE-EEEECTT-SSCCT
T ss_pred             EeCCCCceEE-EECCCCCCCcCEEEEEEeEEeechhcHHHHc-CCCC--CCCCCCCCcccCceeEE-EEEECCC-CCCCC
Confidence            334444 666 5677888888999999999999988776642 2111  1234   6778999999 9999976 54554


Q ss_pred             ccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         145 TRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       145 l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                                                                                                      
T Consensus        80 --------------------------------------------------------------------------------   79 (357)
T 2b5w_A           80 --------------------------------------------------------------------------------   79 (357)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CceEEEEEcCceeecCCCc--ccccccccCCccccccceeec--ccCCCCccceeEEeeccceeeeCCCCCCcccccccc
Q psy1413         225 NAIKVMIHCDRVAIEPGVP--CRTCTYCKEGRYNLCRQIFFC--ATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE  300 (408)
Q Consensus       225 ~~~kvvi~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~  300 (408)
                              +|+|...+..+  |++|.+|++|++++|.+..++  |....+|+|++|+.++++.++++|++++ +.|++..
T Consensus        80 --------GdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~aal~~  150 (357)
T 2b5w_A           80 --------GDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIE  150 (357)
T ss_dssp             --------TCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TTGGGHH
T ss_pred             --------CCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hhhhhhc
Confidence                    99999888777  999999999999999987766  5323479999999999999999999999 8777666


Q ss_pred             hhhhhhhhhhccCcCCC------CEEEEEecchhHHHH-HHHH-HHhCCCeEEEEecChh---hHHHHHHcCCCeEEecC
Q psy1413         301 PLSVGVHACRRAGVTLG------SKVLITGAGPIGLVT-LLTA-RALGASRVVITDILEH---KLKTAKEMGADATVLID  369 (408)
Q Consensus       301 ~~~~~~~~~~~~~~~~~------~~~lv~G~G~~G~~~-~~~~-~~~Ga~~vv~~~~~~~---~~~~~~~~ga~~~i~~~  369 (408)
                      ++.|+|+++++..++++      +++||+|+|++|+.+ +|+| +.+|+++|++++++++   |++.++++|++++ |++
T Consensus       151 ~~~ta~~al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~  229 (357)
T 2b5w_A          151 PISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSR  229 (357)
T ss_dssp             HHHHHHHHHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETT
T ss_pred             hHHHHHHHHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCC
Confidence            89999999988888999      999999999999999 9999 9999988999999998   9999999999999 887


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      +    +++.+ ++++ .+ ++|++|||+|+..+++.+
T Consensus       230 ~----~~~~~-i~~~-~g-g~Dvvid~~g~~~~~~~~  259 (357)
T 2b5w_A          230 Q----TPVED-VPDV-YE-QMDFIYEATGFPKHAIQS  259 (357)
T ss_dssp             T----SCGGG-HHHH-SC-CEEEEEECSCCHHHHHHH
T ss_pred             c----cCHHH-HHHh-CC-CCCEEEECCCChHHHHHH
Confidence            6    45555 6666 55 999999999988666554

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=99.95  E-value=1.1e-27  Score=227.96  Aligned_cols=125  Identities=24%  Similarity=0.272  Sum_probs=112.3

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI  346 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~  346 (408)
                      +|+|++|+.++++.++++|+++++++++.++ ++.|+++++ +...+++++++||+|+ |++|++++|+++.+|++ |++
T Consensus       111 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~-Vi~  189 (342)
T 4eye_A          111 IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAK-VIA  189 (342)
T ss_dssp             SCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEE
T ss_pred             CCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCE-EEE
Confidence            3789999999999999999999999986555 888999999 7789999999999999 99999999999999995 999


Q ss_pred             EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++++++++.++++|++.+++++     +++.+.++++++++++|++|||+|++
T Consensus       190 ~~~~~~~~~~~~~~ga~~v~~~~-----~~~~~~v~~~~~~~g~Dvvid~~g~~  238 (342)
T 4eye_A          190 VVNRTAATEFVKSVGADIVLPLE-----EGWAKAVREATGGAGVDMVVDPIGGP  238 (342)
T ss_dssp             EESSGGGHHHHHHHTCSEEEESS-----TTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred             EeCCHHHHHHHHhcCCcEEecCc-----hhHHHHHHHHhCCCCceEEEECCchh
Confidence            99999999999999999999875     46778888899888999999999975

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=99.95  E-value=4e-28  Score=230.86  Aligned_cols=234  Identities=32%  Similarity=0.470  Sum_probs=195.3

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ ++.+.|.+.+.++++.+.++++++.++.+.. |... .....+..+|+|+.|+|..+|+..+.++.         
T Consensus        12 ~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~-~~~~~p~v~GhE~~G~V~~vG~~v~~~~v---------   79 (339)
T 1rjw_A           12 PLKI-KEVEKPTISYGEVLVRIKACGVCHTDLHAAH-GDWP-VKPKLPLIPGHEGVGIVEEVGPGVTHLKV---------   79 (339)
T ss_dssp             CCEE-EECCCCCCCTTEEEEEEEEEEECHHHHHHHH-TCSS-SCCCSSBCCCSCEEEEEEEECTTCCSCCT---------
T ss_pred             CcEE-EEeeCCCCCCCEEEEEEEEEeEchhhHHHhc-CCCC-cCCCCCeeccccceEEEEEECCCCCcCCC---------
Confidence            4566 5677888888999999999999987765532 2111 11345778999999999999976444444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        80 -------------------------------------------------------------------------------G   80 (339)
T 1rjw_A           80 -------------------------------------------------------------------------------G   80 (339)
T ss_dssp             -------------------------------------------------------------------------------T
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecCCC-cccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         234 DRVAIEPGV-PCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       234 ~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      |+|...+.. +|+.|.+|.+|++++|.+....|. ..+|+|++|+.++++.++++|+++++++++.++ .+.|+++++.+
T Consensus        81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~  159 (339)
T 1rjw_A           81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKV  159 (339)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHH
T ss_pred             CEEEEecCCCCCCCCchhhCcCcccCCCcceeec-CCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHHh
Confidence            999887654 599999999999999998887775 357999999999999999999999999988777 66778889877


Q ss_pred             cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ..+++++++||+|+|++|+.++|+++.+|++ |+++++++++++.++++|++.++|+++    +++.+.+++++  +++|
T Consensus       160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~~~d~~~----~~~~~~~~~~~--~~~d  232 (339)
T 1rjw_A          160 TGAKPGEWVAIYGIGGLGHVAVQYAKAMGLN-VVAVDIGDEKLELAKELGADLVVNPLK----EDAAKFMKEKV--GGVH  232 (339)
T ss_dssp             HTCCTTCEEEEECCSTTHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHTTCSEEECTTT----SCHHHHHHHHH--SSEE
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHCCCCEEecCCC----ccHHHHHHHHh--CCCC
Confidence            7899999999999988999999999999995 999999999999999999999998876    56777788777  4899


Q ss_pred             eEEEcccchhhhhhc
Q psy1413         392 KTIDCSGIESTIKLG  406 (408)
Q Consensus       392 ~i~d~~g~~~~~~~~  406 (408)
                      ++||++|+..+++.+
T Consensus       233 ~vid~~g~~~~~~~~  247 (339)
T 1rjw_A          233 AAVVTAVSKPAFQSA  247 (339)
T ss_dssp             EEEESSCCHHHHHHH
T ss_pred             EEEECCCCHHHHHHH
Confidence            999999986666544

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=99.95  E-value=9.3e-28  Score=230.29  Aligned_cols=130  Identities=17%  Similarity=0.204  Sum_probs=112.6

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcC-----CCCEEEEEec-chhHHHHHHHHHHh-C
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVT-----LGSKVLITGA-GPIGLVTLLTARAL-G  340 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~-----~~~~~lv~G~-G~~G~~~~~~~~~~-G  340 (408)
                      +|+|++|+.++++.++++|++++++++|.++ ...|+|+++ +...++     +++++||+|+ |++|++++|+|+.+ |
T Consensus       118 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g  197 (363)
T 4dvj_A          118 PGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTD  197 (363)
T ss_dssp             CCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCC
T ss_pred             CccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcC
Confidence            5889999999999999999999999999887 456788887 667777     8999999996 99999999999986 6


Q ss_pred             CCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       341 a~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      + +|++++++++|++.++++|+++++|+++     ++.+.++++ .++++|++|||+|+...++.+
T Consensus       198 ~-~Vi~~~~~~~~~~~~~~lGad~vi~~~~-----~~~~~v~~~-~~~g~Dvvid~~g~~~~~~~~  256 (363)
T 4dvj_A          198 L-TVIATASRPETQEWVKSLGAHHVIDHSK-----PLAAEVAAL-GLGAPAFVFSTTHTDKHAAEI  256 (363)
T ss_dssp             S-EEEEECSSHHHHHHHHHTTCSEEECTTS-----CHHHHHHTT-CSCCEEEEEECSCHHHHHHHH
T ss_pred             C-EEEEEeCCHHHHHHHHHcCCCEEEeCCC-----CHHHHHHHh-cCCCceEEEECCCchhhHHHH
Confidence            6 5999999999999999999999999854     466677776 567999999999988766654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=99.95  E-value=4.2e-28  Score=231.74  Aligned_cols=127  Identities=18%  Similarity=0.224  Sum_probs=110.3

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCC-CEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLG-SKVLITGA-GPIGLVTLLTARALGASRVVI  346 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~-~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~  346 (408)
                      +|+|++|+.++++.++++|+++++++|+.++ ...++|+.+++.. +++ +++||+|+ |++|++++|+++.+|++ |++
T Consensus       117 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~-Vi~  194 (349)
T 3pi7_A          117 WGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFR-PIV  194 (349)
T ss_dssp             CCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCE-EEE
T ss_pred             CccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEE
Confidence            5899999999999999999999999999766 4556776556666 666 78999877 99999999999999995 999


Q ss_pred             EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      ++++++|++.++++|+++++|+++    +++.+.++++++++++|++|||+|+...
T Consensus       195 ~~~~~~~~~~~~~~Ga~~~~~~~~----~~~~~~v~~~~~~~g~D~vid~~g~~~~  246 (349)
T 3pi7_A          195 TVRRDEQIALLKDIGAAHVLNEKA----PDFEATLREVMKAEQPRIFLDAVTGPLA  246 (349)
T ss_dssp             EESCGGGHHHHHHHTCSEEEETTS----TTHHHHHHHHHHHHCCCEEEESSCHHHH
T ss_pred             EeCCHHHHHHHHHcCCCEEEECCc----HHHHHHHHHHhcCCCCcEEEECCCChhH
Confidence            999999999999999999999987    7888999999987899999999998754

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=99.95  E-value=3.7e-28  Score=231.54  Aligned_cols=235  Identities=27%  Similarity=0.439  Sum_probs=197.7

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV  152 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv  152 (408)
                      +.+.+ +..+.|.+.+.++++.+.++++++.++.+.. |... ....++..+|+|+.|+|..+|+..+.++.        
T Consensus        13 ~~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~-~~~~~p~v~G~E~~G~V~~vG~~v~~~~v--------   81 (343)
T 2eih_A           13 EVLEV-ADLPVPEPGPKEVRVRLKAAALNHLDVWVRK-GVAS-PKLPLPHVLGADGSGVVDAVGPGVEGFAP--------   81 (343)
T ss_dssp             GGEEE-EECCCCCCCTTEEEEEEEEEECCHHHHHHHH-TSSS-TTCCSSEECCSEEEEEEEEECSSCCSCCT--------
T ss_pred             ceEEE-EecCCCCCCCCEEEEEEEEEEeCHHHHHHhc-CCCC-CCCCCCcccccceEEEEEEECCCCCCCCC--------
Confidence            34666 5677888888999999999999987765542 2111 11346778999999999999976444444        


Q ss_pred             EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                                                                                                      
T Consensus        82 --------------------------------------------------------------------------------   81 (343)
T 2eih_A           82 --------------------------------------------------------------------------------   81 (343)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      +|+|.+.+..+|+.|..|..|++++|++..++|.. .+|+|++|+.++++.++++|+++++++++.++ ++.|+++++.+
T Consensus        82 GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~-~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~  160 (343)
T 2eih_A           82 GDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEH-RHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVD  160 (343)
T ss_dssp             TCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTS-SCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTT
T ss_pred             CCEEEECCCCCcccchhhccCcccccccccccCcC-CCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHH
Confidence            99999999889999999999999999998877753 47999999999999999999999999988555 88899999966


Q ss_pred             -cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         312 -AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       312 -~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                       ..+++++++||+|+ |++|+.++|+++.+|++ |+++++++++++.++++|++.++|+++    +++.+.+++++++++
T Consensus       161 ~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~-Vi~~~~~~~~~~~~~~~ga~~~~d~~~----~~~~~~~~~~~~~~~  235 (343)
T 2eih_A          161 KLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR-VIATAGSEDKLRRAKALGADETVNYTH----PDWPKEVRRLTGGKG  235 (343)
T ss_dssp             TSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHTCSEEEETTS----TTHHHHHHHHTTTTC
T ss_pred             hcCCCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhcCCCEEEcCCc----ccHHHHHHHHhCCCC
Confidence             58999999999999 99999999999999995 999999999999999999999999876    567788888887778


Q ss_pred             CceEEEcccchhhhhh
Q psy1413         390 PDKTIDCSGIESTIKL  405 (408)
Q Consensus       390 ~d~i~d~~g~~~~~~~  405 (408)
                      +|++||++| ...++.
T Consensus       236 ~d~vi~~~g-~~~~~~  250 (343)
T 2eih_A          236 ADKVVDHTG-ALYFEG  250 (343)
T ss_dssp             EEEEEESSC-SSSHHH
T ss_pred             ceEEEECCC-HHHHHH
Confidence            999999999 444443

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=99.95  E-value=4.9e-29  Score=242.44  Aligned_cols=228  Identities=19%  Similarity=0.218  Sum_probs=169.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------   62 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------   62 (408)
                      |+++|||++|++++. |.   ++.++|.++|||++|+|+++|++|++|++||||++.+...|                  
T Consensus        40 v~a~gi~~~D~~~~~-g~---~~~~~p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~  115 (398)
T 1kol_A           40 VVSTNICGSDQHMVR-GR---TTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVN  115 (398)
T ss_dssp             EEEEECCHHHHHHHT-TC---SCCCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSC
T ss_pred             EEEEeechhhHHHHc-CC---CCCCCCcccCcccEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcc
Confidence            568999999999985 32   33467999999999999999999999999999986432111                  


Q ss_pred             -------------------------ccCC--cceeccceeeecc----cccCCCCCCcceEEEEeeeee-cCCeEEEEcc
Q psy1413          63 -------------------------VCLS--PILRRRFSLRFRE----QKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH  110 (408)
Q Consensus        63 -------------------------~~~~--~~~~~p~~~~~~~----~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~  110 (408)
                                               .+..  .++..|+++++.+    .+.++.++.+++.+.. ...+ .+++|+|+|+
T Consensus       116 ~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga  194 (398)
T 1kol_A          116 PARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA  194 (398)
T ss_dssp             SSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC
T ss_pred             cccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC
Confidence                                     1111  2344444444432    2344444444432221 1223 4789999999


Q ss_pred             CccccccccccccccC-------------------------------------------cceeEEEccCch---------
Q psy1413         111 GQIGDFRLSDPMIVGH-------------------------------------------EASGIVSKVGAK---------  138 (408)
Q Consensus       111 G~vG~~~i~~a~~~G~-------------------------------------------~~~~vv~~~g~~---------  138 (408)
                      |++|++++|+++.+|+                                           .++.+++++|..         
T Consensus       195 G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~  274 (398)
T 1kol_A          195 GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGA  274 (398)
T ss_dssp             SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGG
T ss_pred             cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccc
Confidence            9999999999887664                                           246678888753         


Q ss_pred             ---------HHHHhhccCCcEEEEEccCC--C-----------CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcC
Q psy1413         139 ---------VKHLKATRPGGCLVIVGAGS--Q-----------DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASG  195 (408)
Q Consensus       139 ---------~~~~~~l~~gG~iv~~G~~~--~-----------~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g  195 (408)
                               .+++++++++|+++.+|.+.  .           ...++...++.|++++.++.... ++++++++++++|
T Consensus       275 ~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g  354 (398)
T 1kol_A          275 KHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWD  354 (398)
T ss_dssp             GSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTT
T ss_pred             cccchHHHHHHHHHHHhcCCEEEEeccccCCcccccccccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcC
Confidence                     36899999999999999751  1           24566777889999999875443 5688999999999


Q ss_pred             CCC-CCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCc
Q psy1413         196 KVD-VKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDR  235 (408)
Q Consensus       196 ~~~-~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~  235 (408)
                      +++ ++++++++|+|+|+++||+.+.+++.  +|++++++.
T Consensus       355 ~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~--gKvvi~~~~  393 (398)
T 1kol_A          355 RINIAEVVGVQVISLDDAPRGYGEFDAGVP--KKFVIDPHK  393 (398)
T ss_dssp             SCCHHHHHTEEEECGGGHHHHHHHHHHTCS--CEEEECTTC
T ss_pred             CCCCccceeEEEEcHHHHHHHHHHHhCCCc--eEEEEEeCC
Confidence            998 56788999999999999999988764  899888643

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=99.95  E-value=2.6e-27  Score=226.13  Aligned_cols=125  Identities=26%  Similarity=0.292  Sum_probs=114.1

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |+|++|+.++++.++++|++++++++|.++ ++.|+|+++. ...+++++++||+|+ |++|+.++|+++.+|++ |+++
T Consensus       123 G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~-Vi~~  201 (351)
T 1yb5_A          123 GGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK-ILGT  201 (351)
T ss_dssp             CSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEE
T ss_pred             CcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCE-EEEE
Confidence            678999999999999999999999988776 7889999994 688999999999998 99999999999999996 9999


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ++++++++.++++|++.++|+++    ++..+.+.+.+.++++|++|||+|+.
T Consensus       202 ~~~~~~~~~~~~~ga~~~~d~~~----~~~~~~~~~~~~~~~~D~vi~~~G~~  250 (351)
T 1yb5_A          202 AGTEEGQKIVLQNGAHEVFNHRE----VNYIDKIKKYVGEKGIDIIIEMLANV  250 (351)
T ss_dssp             ESSHHHHHHHHHTTCSEEEETTS----TTHHHHHHHHHCTTCEEEEEESCHHH
T ss_pred             eCChhHHHHHHHcCCCEEEeCCC----chHHHHHHHHcCCCCcEEEEECCChH
Confidence            99999999999999999999876    67778888888777999999999975

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=99.95  E-value=2e-27  Score=227.39  Aligned_cols=125  Identities=22%  Similarity=0.349  Sum_probs=113.9

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |+|++|+.++++.++++|++++++++|.++ ++.|+|+++ +...+++++++||+|+ |++|+.++|+++.+|++ |+++
T Consensus       115 G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~-Vi~~  193 (354)
T 2j8z_A          115 GGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAI-PLVT  193 (354)
T ss_dssp             CCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred             CcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEE
Confidence            679999999999999999999999988776 788999998 6788999999999997 99999999999999996 9999


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ++++++++.++++|++.++|+++    +++.+.+.+.+.++++|++|||+|+.
T Consensus       194 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~G~~  242 (354)
T 2j8z_A          194 AGSQKKLQMAEKLGAAAGFNYKK----EDFSEATLKFTKGAGVNLILDCIGGS  242 (354)
T ss_dssp             ESCHHHHHHHHHHTCSEEEETTT----SCHHHHHHHHTTTSCEEEEEESSCGG
T ss_pred             eCCHHHHHHHHHcCCcEEEecCC----hHHHHHHHHHhcCCCceEEEECCCch
Confidence            99999999999999999999876    66778888888777899999999986

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=99.95  E-value=1.5e-27  Score=226.49  Aligned_cols=129  Identities=27%  Similarity=0.295  Sum_probs=113.6

Q ss_pred             ccceeEEeeccceeeeCCCCCCccc--ccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEE--GALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVV  345 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~--aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv  345 (408)
                      |+|++|+.++++.++++|+++++++  ++.++ ++.|+++++. ...+++++++||+|+ |++|+.++|+++.+|++ |+
T Consensus        96 G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~-Vi  174 (333)
T 1wly_A           96 GAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGAT-VI  174 (333)
T ss_dssp             CCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCE-EE
T ss_pred             CcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCE-EE
Confidence            5688999999999999999999998  66665 8889999994 678999999999998 99999999999999995 99


Q ss_pred             EEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       346 ~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      ++++++++++.++++|++.++|+++    ++..+.+.+.+.++++|++|||+|+ .+++.
T Consensus       175 ~~~~~~~~~~~~~~~g~~~~~d~~~----~~~~~~i~~~~~~~~~d~vi~~~g~-~~~~~  229 (333)
T 1wly_A          175 GTVSTEEKAETARKLGCHHTINYST----QDFAEVVREITGGKGVDVVYDSIGK-DTLQK  229 (333)
T ss_dssp             EEESSHHHHHHHHHHTCSEEEETTT----SCHHHHHHHHHTTCCEEEEEECSCT-TTHHH
T ss_pred             EEeCCHHHHHHHHHcCCCEEEECCC----HHHHHHHHHHhCCCCCeEEEECCcH-HHHHH
Confidence            9999999999999999999999876    6677788888877789999999998 44443

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=99.95  E-value=6.4e-28  Score=227.20  Aligned_cols=117  Identities=21%  Similarity=0.251  Sum_probs=100.0

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEe
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      +|+|++|+.++++.++++|++++++++|.++ ++.|+|+++++..+++++++||+|+|++|++++|+|+.+|++ |++++
T Consensus        95 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~-Vi~~~  173 (315)
T 3goh_A           95 HGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYV-VDLVS  173 (315)
T ss_dssp             CCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCE-EEEEC
T ss_pred             CcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEE
Confidence            5899999999999999999999999998665 889999999889999999999999999999999999999995 99998


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                       +++|++.++++|++++++  +   .++    +     ++++|++|||+|++..
T Consensus       174 -~~~~~~~~~~lGa~~v~~--d---~~~----v-----~~g~Dvv~d~~g~~~~  212 (315)
T 3goh_A          174 -ASLSQALAAKRGVRHLYR--E---PSQ----V-----TQKYFAIFDAVNSQNA  212 (315)
T ss_dssp             -SSCCHHHHHHHTEEEEES--S---GGG----C-----CSCEEEEECC------
T ss_pred             -ChhhHHHHHHcCCCEEEc--C---HHH----h-----CCCccEEEECCCchhH
Confidence             999999999999999983  1   122    1     6799999999998765

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=99.95  E-value=3.8e-28  Score=234.32  Aligned_cols=130  Identities=17%  Similarity=0.097  Sum_probs=113.9

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEe-c-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITG-A-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G-~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |+|++|+.++++.++++|+++++++++.++ ...|+|++++... ++++++||+| + |++|++++|+|+.+|++ |+++
T Consensus       125 G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~-Vi~~  202 (379)
T 3iup_A          125 AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKDGIK-LVNI  202 (379)
T ss_dssp             CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCC-EEEE
T ss_pred             CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCE-EEEE
Confidence            457899999999999999999999999776 4556776666555 8999999995 5 99999999999999996 9999


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      +++++|++.++++|+++++|+++    +++.+.++++++++++|++|||+|+..+++.+
T Consensus       203 ~~~~~~~~~~~~lGa~~~~~~~~----~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~  257 (379)
T 3iup_A          203 VRKQEQADLLKAQGAVHVCNAAS----PTFMQDLTEALVSTGATIAFDATGGGKLGGQI  257 (379)
T ss_dssp             ESSHHHHHHHHHTTCSCEEETTS----TTHHHHHHHHHHHHCCCEEEESCEEESHHHHH
T ss_pred             ECCHHHHHHHHhCCCcEEEeCCC----hHHHHHHHHHhcCCCceEEEECCCchhhHHHH
Confidence            99999999999999999999987    78889999999888999999999987665543

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=99.95  E-value=2.6e-28  Score=232.94  Aligned_cols=227  Identities=19%  Similarity=0.235  Sum_probs=171.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE---------------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~---------------------   59 (408)
                      |+++|||++|++.+. |.++ ....+|.++|||++|+|+++|++|++|++||||++.+.                     
T Consensus        37 v~a~gi~~~D~~~~~-g~~~-~~~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~  114 (347)
T 2hcy_A           37 VKYSGVCHTDLHAWH-GDWP-LPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHA  114 (347)
T ss_dssp             EEEEEECHHHHHHHH-TCSS-SCCCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTC
T ss_pred             EEEEEechhHHHHhc-CCCC-CCCCCCcccCccceEEEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccc
Confidence            579999999999985 3322 22468999999999999999999999999999986431                     


Q ss_pred             -------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-Cccccccccccccc
Q psy1413          60 -------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIV  124 (408)
Q Consensus        60 -------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~  124 (408)
                                   +...+...++..|+++++++++.++.++.+++.+.... .+ .+++++|+|+ |++|++++++++..
T Consensus       115 ~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~~  193 (347)
T 2hcy_A          115 DLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSA-NLMAGHWVAISGAAGGLGSLAVQYAKAM  193 (347)
T ss_dssp             EEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHHTT-TCCTTCEEEEETTTSHHHHHHHHHHHHT
T ss_pred             cccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHC
Confidence                         11223345566677777755555555444443221111 23 4788999996 89999888877765


Q ss_pred             cC------------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCC-
Q psy1413         125 GH------------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGS-  158 (408)
Q Consensus       125 G~------------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~-  158 (408)
                      |+                                          .++.+++++|...   +++++++++|+++.+|... 
T Consensus       194 Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~  273 (347)
T 2hcy_A          194 GYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAG  273 (347)
T ss_dssp             TCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTT
T ss_pred             CCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCC
Confidence            54                                          1455666776532   6789999999999999876 


Q ss_pred             CCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         159 QDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       159 ~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      .+.+++...++.|++++.|++... ++++++++++++|++++.   +++|||+|+++||+.+.+++. .+|++++.+
T Consensus       274 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~-~gKvvv~~~  346 (347)
T 2hcy_A          274 AKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSP---IKVVGLSTLPEIYEKMEKGQI-VGRYVVDTS  346 (347)
T ss_dssp             CEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCC-SSEEEEESC
T ss_pred             CCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCCCccc---eEEEcHHHHHHHHHHHHcCCc-ceeEEEecC
Confidence            456788888999999999988776 789999999999998763   589999999999999988653 578888764

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=99.95  E-value=1e-27  Score=228.51  Aligned_cols=232  Identities=27%  Similarity=0.415  Sum_probs=188.3

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ ++.+.|.+.+.++++.+.++++++.++.+.. |........++..+|+|+.|+|..+|+. +.++.         
T Consensus        15 ~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~~~---------   82 (344)
T 2h6e_A           15 PLSI-EDVNIPEPQGEEVLIRIGGAGVCRTDLRVWK-GVEAKQGFRLPIILGHENAGTIVEVGEL-AKVKK---------   82 (344)
T ss_dssp             ------EEEECCCCTTCEEEEEEEEECCHHHHHHHT-TSCCCTTCCSSEECCCCEEEEEEEECTT-CCCCT---------
T ss_pred             CCeE-EEeeCCCCCCCEEEEEEEEEEechhhHHHHc-CCCcccCCCCCccccccceEEEEEECCC-CCCCC---------
Confidence            4566 5667788888999999999999988776542 2111112346778999999999999975 44444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        83 -------------------------------------------------------------------------------G   83 (344)
T 2h6e_A           83 -------------------------------------------------------------------------------G   83 (344)
T ss_dssp             -------------------------------------------------------------------------------T
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           9


Q ss_pred             CceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeec-cceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHA-ADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      |+|...+..+|+.|.+|++|++++|.+...+|. ..+|+|++|+.++ ++.++++ ++++++++++++ ...|+|+++.+
T Consensus        84 drV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~~  161 (344)
T 2h6e_A           84 DNVVVYATWGDLTCRYCREGKFNICKNQIIPGQ-TTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIRQ  161 (344)
T ss_dssp             CEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTT-TBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhhCCCcccCCCcccccc-ccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHHh
Confidence            999888888999999999999999998777765 3579999999999 9999999 999999988776 56778888876


Q ss_pred             c-----CcCCCCEEEEEecchhHHHHHHHHHHh--CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413         312 A-----GVTLGSKVLITGAGPIGLVTLLTARAL--GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       312 ~-----~~~~~~~~lv~G~G~~G~~~~~~~~~~--Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      .     .+ +++++||+|+|++|++++|+++.+  |++ |++++++++|++.++++|+++++|+++    .  .+.++++
T Consensus       162 ~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~----~--~~~~~~~  233 (344)
T 2h6e_A          162 ALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNIT-IVGISRSKKHRDFALELGADYVSEMKD----A--ESLINKL  233 (344)
T ss_dssp             HHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTCE-EEEECSCHHHHHHHHHHTCSEEECHHH----H--HHHHHHH
T ss_pred             hhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCCE-EEEEeCCHHHHHHHHHhCCCEEecccc----c--hHHHHHh
Confidence            6     78 999999999999999999999999  997 999999999999999999999998642    1  2345566


Q ss_pred             hcCCCCceEEEcccchhhhhhc
Q psy1413         385 LQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       385 ~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      ++++++|++|||+|+..+++.+
T Consensus       234 ~~g~g~D~vid~~g~~~~~~~~  255 (344)
T 2h6e_A          234 TDGLGASIAIDLVGTEETTYNL  255 (344)
T ss_dssp             HTTCCEEEEEESSCCHHHHHHH
T ss_pred             hcCCCccEEEECCCChHHHHHH
Confidence            6667899999999988666554

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=99.95  E-value=7.5e-27  Score=225.15  Aligned_cols=129  Identities=20%  Similarity=0.245  Sum_probs=109.7

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccC----cCCCCEEEEEec-chhHHHHHHHHHHhCCC
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAG----VTLGSKVLITGA-GPIGLVTLLTARALGAS  342 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~----~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~  342 (408)
                      +|+|++|+.++++.++++|+++++++|+.++ .+.|+|+++. ...    +++++++||+|+ |++|+.++|+++.+|++
T Consensus       131 ~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~  210 (375)
T 2vn8_A          131 QGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAH  210 (375)
T ss_dssp             CCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCE
T ss_pred             CccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCE
Confidence            4889999999999999999999999999888 5678999884 567    899999999997 99999999999999996


Q ss_pred             eEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch-hhhhhcC
Q psy1413         343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE-STIKLGM  407 (408)
Q Consensus       343 ~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~-~~~~~~~  407 (408)
                       |++++ ++++++.++++|++.++|+++    +++.+.+.+   ..++|++|||+|+. .+++.++
T Consensus       211 -Vi~~~-~~~~~~~~~~lGa~~v~~~~~----~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~  267 (375)
T 2vn8_A          211 -VTAVC-SQDASELVRKLGADDVIDYKS----GSVEEQLKS---LKPFDFILDNVGGSTETWAPDF  267 (375)
T ss_dssp             -EEEEE-CGGGHHHHHHTTCSEEEETTS----SCHHHHHHT---SCCBSEEEESSCTTHHHHGGGG
T ss_pred             -EEEEe-ChHHHHHHHHcCCCEEEECCc----hHHHHHHhh---cCCCCEEEECCCChhhhhHHHH
Confidence             88777 678899999999999999876    455555544   35899999999988 5555543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=99.95  E-value=8.6e-29  Score=240.96  Aligned_cols=220  Identities=20%  Similarity=0.252  Sum_probs=166.6

Q ss_pred             CCeeeecccchhhhhcCCCCC----CCCCCCccccCCccEEEEEeCCCC------CCCCCCCEEEEccCcc---------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGD----FRLSDPMIVGHEASGIVSKVGAKV------KHLKVDNQTRFVPEFR---------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~----~~~~~P~i~GhE~~G~Vv~vG~~v------~~~~vGdrV~~~~~~~---------   61 (408)
                      |+++|||++|++.+.++..+.    ...++|.++|||++|+|+++|++|      ++|++||||++.+...         
T Consensus        62 v~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~  141 (404)
T 3ip1_A           62 VKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAE  141 (404)
T ss_dssp             EEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHT
T ss_pred             EeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHC
Confidence            579999999999985432111    124789999999999999999999      8999999999765322         


Q ss_pred             ------------------------cccCCcceeccceeeec------ccccCCCCCCcceEEEE-eeeee-cCCeEEEEc
Q psy1413          62 ------------------------NVCLSPILRRRFSLRFR------EQKPIEDPDDHEVLLEM-HCVGI-CGSDVHYLT  109 (408)
Q Consensus        62 ------------------------~~~~~~~~~~p~~~~~~------~~~~lp~~~~~~~~~~~-~~~~~-~g~~vlv~g  109 (408)
                                              ..+...++..|+.++++      +.+.++.++.+++.+.. ....+ .+++|+|+|
T Consensus       142 g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G  221 (404)
T 3ip1_A          142 GFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILG  221 (404)
T ss_dssp             TCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEEC
T ss_pred             cCcccCccccccCCCCCCCCcceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEEC
Confidence                                    22223334444444321      13334433333332211 11122 588999999


Q ss_pred             cCccccccccccccccC-------------------------------------------cceeEEEccCchH----HHH
Q psy1413         110 HGQIGDFRLSDPMIVGH-------------------------------------------EASGIVSKVGAKV----KHL  142 (408)
Q Consensus       110 ~G~vG~~~i~~a~~~G~-------------------------------------------~~~~vv~~~g~~~----~~~  142 (408)
                      +|++|++++|+++.+|+                                           .++.+++++|...    ..+
T Consensus       222 aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~  301 (404)
T 3ip1_A          222 GGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIE  301 (404)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHH
Confidence            99999999999987775                                           2667888888762    355


Q ss_pred             hhc----cCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHH
Q psy1413         143 KAT----RPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY--ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAF  216 (408)
Q Consensus       143 ~~l----~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~  216 (408)
                      ++|    +++|+++.+|....+.+++...++.+++++.|++..  ..+++++++++++| +++.++++++|+|+|+++||
T Consensus       302 ~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~  380 (404)
T 3ip1_A          302 EVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYI  380 (404)
T ss_dssp             HHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHH
T ss_pred             HHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecCCCchHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHH
Confidence            666    999999999998888899999999999999999864  37899999999999 99999999999999999999


Q ss_pred             HHHHc
Q psy1413         217 ETAKT  221 (408)
Q Consensus       217 ~~~~~  221 (408)
                      +.+..
T Consensus       381 ~~~~~  385 (404)
T 3ip1_A          381 KRLQT  385 (404)
T ss_dssp             HHTTT
T ss_pred             HHHhC
Confidence            99973

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=99.95  E-value=3e-28  Score=232.30  Aligned_cols=225  Identities=20%  Similarity=0.228  Sum_probs=156.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++|||++|++.+. |.++.....+|.++|||++|+|+++|++ ++|++||||+..+...                   
T Consensus        35 v~a~gi~~~D~~~~~-g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~  112 (344)
T 2h6e_A           35 IGGAGVCRTDLRVWK-GVEAKQGFRLPIILGHENAGTIVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQI  112 (344)
T ss_dssp             EEEEECCHHHHHHHT-TSCCCTTCCSSEECCCCEEEEEEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCB
T ss_pred             EEEEEechhhHHHHc-CCCcccCCCCCccccccceEEEEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCcc
Confidence            479999999999985 4322113468999999999999999999 9999999997654221                   


Q ss_pred             --------------ccc-CCcceeccceeeecccccCCCCCCcceEEEEee----eeecCCeEEEEccCccccccccccc
Q psy1413          62 --------------NVC-LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHC----VGICGSDVHYLTHGQIGDFRLSDPM  122 (408)
Q Consensus        62 --------------~~~-~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~----~~~~g~~vlv~g~G~vG~~~i~~a~  122 (408)
                                    ..+ ...++.. ++++++++++++....+++.+....    ..+.+++|+|+|+|++|++++|+++
T Consensus       113 ~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~g~~VlV~GaG~vG~~aiqlak  191 (344)
T 2h6e_A          113 IPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILK  191 (344)
T ss_dssp             CBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTCSSCEEEEECCSHHHHHHHHHHH
T ss_pred             ccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCCCCCEEEEECCCHHHHHHHHHHH
Confidence                          122 3334444 5555544454554433443222111    0226899999999999999999999


Q ss_pred             cc--cC---------------------------c-------------ceeEEEccCch---HHHHhhccCCcEEEEEccC
Q psy1413         123 IV--GH---------------------------E-------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAG  157 (408)
Q Consensus       123 ~~--G~---------------------------~-------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~  157 (408)
                      .+  |+                           +             ++.+++++|..   .+++++++++|+++.+|.+
T Consensus       192 ~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~  271 (344)
T 2h6e_A          192 ALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGME  271 (344)
T ss_dssp             HHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred             HhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCC
Confidence            88  86                           1             35567777765   2679999999999999987


Q ss_pred             CCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         158 SQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       158 ~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      ..+.+++...++.|++++.|++... ++++++++++++|++++  .+ ++|||+|+++||+.+.+++. .+|++++
T Consensus       272 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~--~i-~~~~l~~~~~A~~~~~~~~~-~gKvvl~  343 (344)
T 2h6e_A          272 GKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKP--YI-IKVPLDDINKAFTNLDEGRV-DGRQVIT  343 (344)
T ss_dssp             SSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCC--CE-EEECC-----------------CEEEEC
T ss_pred             CCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHcCCCCc--ce-EEEeHHHHHHHHHHHHcCCC-ceEEEEe
Confidence            7777888888999999999998776 78999999999999864  46 99999999999999987653 5677764

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=99.95  E-value=4.4e-27  Score=225.99  Aligned_cols=131  Identities=19%  Similarity=0.260  Sum_probs=110.3

Q ss_pred             ccceeEEeeccceeeeCCC-----------CCCcccccccc-hhhhhhhhhhc-cCcCCC-CEEEEEec-chhHHHHHHH
Q psy1413         271 GNLSRYYRHAADFCHKLPD-----------HVSLEEGALLE-PLSVGVHACRR-AGVTLG-SKVLITGA-GPIGLVTLLT  335 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~-----------~~~~~~aa~~~-~~~~~~~~~~~-~~~~~~-~~~lv~G~-G~~G~~~~~~  335 (408)
                      |+|++|+.++++.++++|+           ++++++++.++ +..|+|+++.+ ..++++ +++||+|+ |++|++++|+
T Consensus       108 G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiql  187 (364)
T 1gu7_A          108 GTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQI  187 (364)
T ss_dssp             CCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHH
T ss_pred             CcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHH
Confidence            6789999999999999998           89999999887 67889999866 589999 99999999 9999999999


Q ss_pred             HHHhCCCeEEEEecChhh----HHHHHHcCCCeEEecCCCCChHHHHHHHHHHh--cCCCCceEEEcccchhhh
Q psy1413         336 ARALGASRVVITDILEHK----LKTAKEMGADATVLIDRNHSLEEISTHIIELL--QGEQPDKTIDCSGIESTI  403 (408)
Q Consensus       336 ~~~~Ga~~vv~~~~~~~~----~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~--~~~~~d~i~d~~g~~~~~  403 (408)
                      |+.+|++ +++++++.++    .+.++++|+++++++++. ..+++.+.+++++  +++++|++|||+|+....
T Consensus       188 ak~~Ga~-vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~  259 (364)
T 1gu7_A          188 GKLLNFN-SISVIRDRPNLDEVVASLKELGATQVITEDQN-NSREFGPTIKEWIKQSGGEAKLALNCVGGKSST  259 (364)
T ss_dssp             HHHHTCE-EEEEECCCTTHHHHHHHHHHHTCSEEEEHHHH-HCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH
T ss_pred             HHHCCCE-EEEEecCccccHHHHHHHHhcCCeEEEecCcc-chHHHHHHHHHHhhccCCCceEEEECCCchhHH
Confidence            9999997 6666655544    577789999999997530 0046777888888  677999999999987665

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.95  E-value=6.6e-27  Score=221.47  Aligned_cols=129  Identities=24%  Similarity=0.229  Sum_probs=114.2

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |+|++|+.++++.++++|+++++++++.++ ++.|+++++. ...+++++++||+|+ |++|+.++|+++.+|++ |+++
T Consensus        93 G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~-V~~~  171 (327)
T 1qor_A           93 GAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGT  171 (327)
T ss_dssp             CCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCE-EEEE
T ss_pred             ceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCE-EEEE
Confidence            679999999999999999999999987665 7889999995 778999999999997 99999999999999995 9999


Q ss_pred             ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      ++++++++.++++|++.++|+++    ++..+.+.+.+.++++|++|||+| ..+++.
T Consensus       172 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~D~vi~~~g-~~~~~~  224 (327)
T 1qor_A          172 VGTAQKAQSALKAGAWQVINYRE----EDLVERLKEITGGKKVRVVYDSVG-RDTWER  224 (327)
T ss_dssp             ESSHHHHHHHHHHTCSEEEETTT----SCHHHHHHHHTTTCCEEEEEECSC-GGGHHH
T ss_pred             eCCHHHHHHHHHcCCCEEEECCC----ccHHHHHHHHhCCCCceEEEECCc-hHHHHH
Confidence            99999999999999999999876    667778888887778999999999 444444

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=99.95  E-value=3.3e-28  Score=231.92  Aligned_cols=228  Identities=20%  Similarity=0.255  Sum_probs=170.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++|||++|++.+. |.++ ...++|.++|||++|+|+++|++|++|++||||++.+...                   
T Consensus        34 v~a~gi~~~D~~~~~-g~~~-~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~  111 (343)
T 2eih_A           34 LKAAALNHLDVWVRK-GVAS-PKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQ  111 (343)
T ss_dssp             EEEEECCHHHHHHHH-TSSS-TTCCSSEECCSEEEEEEEEECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCE
T ss_pred             EEEEEeCHHHHHHhc-CCCC-CCCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCcccchhhccCccccccccc
Confidence            579999999999985 4322 1236899999999999999999999999999999654221                   


Q ss_pred             --------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-Ccccccccccccccc
Q psy1413          62 --------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVG  125 (408)
Q Consensus        62 --------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G  125 (408)
                                    ..+...++..|+++++++++.++.++.+++.+......+ .+++++|+|+ |++|++++++++.+|
T Consensus       112 ~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G  191 (343)
T 2eih_A          112 ILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFG  191 (343)
T ss_dssp             ETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTT
T ss_pred             ccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCC
Confidence                          122234455566666644444665555554332221223 4789999996 999999988887666


Q ss_pred             C------------------------------------------cceeEEEccCch--HHHHhhccCCcEEEEEccCCCC-
Q psy1413         126 H------------------------------------------EASGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQD-  160 (408)
Q Consensus       126 ~------------------------------------------~~~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~~-  160 (408)
                      +                                          .++.+++++|..  ..++++++++|+++.+|..... 
T Consensus       192 ~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  271 (343)
T 2eih_A          192 ARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYE  271 (343)
T ss_dssp             CEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSCC
T ss_pred             CEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCc
Confidence            4                                          245566676632  2679999999999999976653 


Q ss_pred             cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         161 VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       161 ~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      ..++...++.|++++.|++... ++++++++++++|+++  ++++++|||+|+++||+.+.+++. .+|++++.
T Consensus       272 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~-~gKvvv~~  342 (343)
T 2eih_A          272 GTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLK--PVVGQVLPLEAAAEGHRLLEERRV-FGKVVLQV  342 (343)
T ss_dssp             CCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHTTCS-SSEEEEEC
T ss_pred             CccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCC--CceeEEeeHHHHHHHHHHHHcCCC-ceEEEEec
Confidence            3577778899999999988655 7899999999999985  578999999999999999987654 46877753

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=99.95  E-value=2.1e-28  Score=233.81  Aligned_cols=230  Identities=15%  Similarity=0.188  Sum_probs=174.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      |+++|||++|++.+. |..+ ...++|.++|||++|+|+++|++|++|++||||+...      ++...+...++..|++
T Consensus        37 v~a~gi~~~D~~~~~-g~~~-~~~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~~~~iP~~  114 (349)
T 4a27_A           37 VKACGLNFIDLMVRQ-GNID-NPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDD  114 (349)
T ss_dssp             EEEEEECHHHHHHHH-TCSS-SCCCSSBCCCSEEEEEEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTT
T ss_pred             EEEEecCHHHHHHhC-CCcC-CCCCCCccccceeEEEEEEeCCCCCCCCCCCEEEEecCCCcceEEEEecHHHeEECCCC
Confidence            468999999999985 4322 3357899999999999999999999999999998543      4556777788899999


Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccC--------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGH--------------------------  126 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~--------------------------  126 (408)
                      +++++.+.++.+..+++.+......+ .+++|+|+|+ |++|++++|+++.+|.                          
T Consensus       115 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~~~ga~~~~~~~  194 (349)
T 4a27_A          115 MSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRN  194 (349)
T ss_dssp             SCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGHHHHGGGSSEEEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHcCCcEEEcCC
Confidence            99977777776666665433222333 5889999996 9999999999887642                          


Q ss_pred             -------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC-----------------CcccCHHHHHhcCcE
Q psy1413         127 -------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-----------------DVKIPLVLTMTKEID  174 (408)
Q Consensus       127 -------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-----------------~~~~~~~~~~~~~~~  174 (408)
                                   .++.+++++|...  +++++++++|+++.+|....                 ...++...++.++++
T Consensus       195 ~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  274 (349)
T 4a27_A          195 ADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKV  274 (349)
T ss_dssp             SCHHHHHHHHCTTCEEEEEEECC-------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCE
T ss_pred             ccHHHHHHHhcCCCceEEEECCCchhHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCce
Confidence                         2456677776543  67899999999999997531                 123666778999999


Q ss_pred             EEEeecC------------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCc
Q psy1413         175 IRGVFRY------------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDR  235 (408)
Q Consensus       175 l~g~~~~------------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~  235 (408)
                      +.+.+..            .++++++++++++|+++  ++++++|+|+|+++||+.+.+++. .+|++++.++
T Consensus       275 i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~-~GKvvi~~~~  344 (349)
T 4a27_A          275 IAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIK--PVVDSLWALEEVKEAMQRIHDRGN-IGKLILDVEK  344 (349)
T ss_dssp             EEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCC--CCEEEEECGGGHHHHHHHHHTTCC-SSEEEEETTC
T ss_pred             EEEEeehheeccccchHHHHHHHHHHHHHHHCCCcc--ccccceECHHHHHHHHHHHHhCCC-CceEEEecCC
Confidence            9998642            35689999999999984  679999999999999999988654 5688888754

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=99.95  E-value=4.7e-28  Score=232.03  Aligned_cols=227  Identities=18%  Similarity=0.195  Sum_probs=174.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCCcceeccc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLSPILRRRF   73 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~~~~~~p~   73 (408)
                      |+++|||++|++.+. |.++ ....+|.++|||++|+|+++|++|++|++||||+..+       +|...+...++..|+
T Consensus        61 v~a~gi~~~D~~~~~-G~~~-~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~  138 (357)
T 1zsy_A           61 MLAAPINPSDINMIQ-GNYG-LLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPS  138 (357)
T ss_dssp             EEEEECCHHHHHHHH-TCSS-CCCCSSEECCSCCEEEEEEECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGGEEEECS
T ss_pred             EEECCCCHHHhhHhc-CCCC-CCCCCCccccceEEEEEEEeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHHcEECCC
Confidence            579999999999985 3322 1235799999999999999999999999999998653       445666778889999


Q ss_pred             eeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccCc------------------------
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGHE------------------------  127 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~~------------------------  127 (408)
                      ++++++++.++....+++.+......+ .+++|+|+|+ |++|++++|+++.+|+.                        
T Consensus       139 ~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~  218 (357)
T 1zsy_A          139 DIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAE  218 (357)
T ss_dssp             SSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCS
T ss_pred             CCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCc
Confidence            999976677766555554322222223 5889999996 99999999888766641                        


Q ss_pred             ----------------------ceeEEEccCchH--HHHhhccCCcEEEEEccC-CCCcccCHHHHHhcCcEEEEeecC-
Q psy1413         128 ----------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAG-SQDVKIPLVLTMTKEIDIRGVFRY-  181 (408)
Q Consensus       128 ----------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~-~~~~~~~~~~~~~~~~~l~g~~~~-  181 (408)
                                            ++.+++++|...  +++++++++|+++.+|.. ..+..++...+++|++++.|++.. 
T Consensus       219 ~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  298 (357)
T 1zsy_A          219 HVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQ  298 (357)
T ss_dssp             EEEEHHHHHSGGGGGTTSSSCCCSEEEESSCHHHHHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHH
T ss_pred             EEEecCcchHHHHHHHHhCCCCceEEEECCCcHHHHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcch
Confidence                                  344555655432  578999999999999854 446778888899999999998642 


Q ss_pred             ----------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         182 ----------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       182 ----------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                                .+.++++++++++|++++.  +.++|||+|+++||+.+.+++.. +|++++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~-gKvvl~  356 (357)
T 1zsy_A          299 WKKDHSPDQFKELILTLCDLIRRGQLTAP--ACSQVPLQDYQSALEASMKPFIS-SKQILT  356 (357)
T ss_dssp             HHHHSCHHHHHHHHHHHHHHHHTTSSCCC--CEEEEEGGGHHHHHHHHTSSSCS-SEEEEE
T ss_pred             hcccCCHHHHHHHHHHHHHHHHcCCCcCc--cceEEcHHHHHHHHHHHHhCCCC-CcEEEe
Confidence                      1347889999999999765  56999999999999999887653 488875

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=99.94  E-value=1.3e-28  Score=232.47  Aligned_cols=227  Identities=16%  Similarity=0.246  Sum_probs=174.7

Q ss_pred             CCeeeecccchhhhhcC-CCC-CCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------CcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHG-QIG-DFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP----------EFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g-~~~-~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~----------~~~~~~~~~~   68 (408)
                      |+++|||++|++.+.+. +.. ....++|.++|||++|+|+++|++|++|++||||+..+          +|...+...+
T Consensus        40 v~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~  119 (321)
T 3tqh_A           40 VHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTI  119 (321)
T ss_dssp             EEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGE
T ss_pred             EEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHh
Confidence            47999999999988531 100 12457899999999999999999999999999998654          3335566777


Q ss_pred             eeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC--------------------
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH--------------------  126 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~--------------------  126 (408)
                      +..|+++++++++.+|....+++.+. ....+ .+++++|+| +|++|++++|+++.+|+                    
T Consensus       120 ~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~  198 (321)
T 3tqh_A          120 IQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAE  198 (321)
T ss_dssp             EECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCS
T ss_pred             ccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCC
Confidence            88899999877777765555555333 22333 588999997 99999999999988775                    


Q ss_pred             ----------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecC-C-CcHH
Q psy1413         127 ----------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY-A-NDYP  186 (408)
Q Consensus       127 ----------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~-~-~~~~  186 (408)
                                      .++.+++++|...  +++++++++|+++.+|......  ....+..+++++.+.+.. . ++++
T Consensus       199 ~~i~~~~~~~~~~~~~g~D~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  276 (321)
T 3tqh_A          199 QCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFGLLKQFNIEELH  276 (321)
T ss_dssp             EEEETTTSCHHHHCCSCEEEEEESSCHHHHHHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEECCCCCCCHHHHH
T ss_pred             EEEeCCCcchhhhhccCCCEEEECCCcHHHHHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEEEecCCCHHHHH
Confidence                            1455677777543  6899999999999998654322  223567899999996543 3 6799


Q ss_pred             HHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         187 IALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       187 ~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      ++++++++|++++  .++++|||+|+++||+.+.+++. .+|++++.
T Consensus       277 ~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~-~gKvvl~~  320 (321)
T 3tqh_A          277 YLGKLVSEDKLRI--EISRIFQLSEAVTAHELLETGHV-RGKLVFKV  320 (321)
T ss_dssp             HHHHHHHTTSSCC--CEEEEECGGGHHHHHHHHHTTCC-CSEEEEEC
T ss_pred             HHHHHHHCCCccc--ccccEEcHHHHHHHHHHHHcCCC-CceEEEEe
Confidence            9999999999875  59999999999999999998764 45888764

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=99.94  E-value=4.6e-27  Score=224.32  Aligned_cols=237  Identities=24%  Similarity=0.405  Sum_probs=196.7

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ +..+.|.+.+.++++.+.++++++.++.+.- |... ....++..+|+|+.|+|..+|+..+.++.         
T Consensus        17 ~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~-~~~~~p~v~G~E~~G~V~~vG~~v~~~~~---------   84 (347)
T 2hcy_A           17 KLEY-KDIPVPKPKANELLINVKYSGVCHTDLHAWH-GDWP-LPVKLPLVGGHEGAGVVVGMGENVKGWKI---------   84 (347)
T ss_dssp             CCEE-EEEECCCCCTTEEEEEEEEEEECHHHHHHHH-TCSS-SCCCSSEECCCEEEEEEEEECTTCCSCCT---------
T ss_pred             CCEE-EEeeCCCCCCCEEEEEEEEEEechhHHHHhc-CCCC-CCCCCCcccCccceEEEEEECCCCCCCcC---------
Confidence            4666 5677888888999999999999987765532 2111 11345778999999999999976444444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        85 -------------------------------------------------------------------------------G   85 (347)
T 2hcy_A           85 -------------------------------------------------------------------------------G   85 (347)
T ss_dssp             -------------------------------------------------------------------------------T
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecCCC-cccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413         234 DRVAIEPGV-PCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR  311 (408)
Q Consensus       234 ~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~  311 (408)
                      |+|...+.. +|+.|.+|..|++++|++....|. ..+|+|++|+.++++.++++|++++++++++++ .+.|+|+++.+
T Consensus        86 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~  164 (347)
T 2hcy_A           86 DYAGIKWLNGSCMACEYCELGNESNCPHADLSGY-THDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKS  164 (347)
T ss_dssp             CEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTT-TBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHHT
T ss_pred             CEEEEecCCCCCCCChhhhCCCcccCcccccccc-CCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHHh
Confidence            999887654 599999999999999998877774 357999999999999999999999999988877 66778899877


Q ss_pred             cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         312 AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       312 ~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      ..+++++++||+|+ |++|+.++|+++.+|++ |+++++++++++.++++|++.++|+.+.   +++.+.+++++.+ ++
T Consensus       165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~-V~~~~~~~~~~~~~~~~g~~~~~d~~~~---~~~~~~~~~~~~~-~~  239 (347)
T 2hcy_A          165 ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYR-VLGIDGGEGKEELFRSIGGEVFIDFTKE---KDIVGAVLKATDG-GA  239 (347)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECSTTHHHHHHHTTCCEEEETTTC---SCHHHHHHHHHTS-CE
T ss_pred             cCCCCCCEEEEECCCchHHHHHHHHHHHCCCc-EEEEcCCHHHHHHHHHcCCceEEecCcc---HhHHHHHHHHhCC-CC
Confidence            78999999999999 99999999999999995 9999999999999999999999987632   5677788888876 89


Q ss_pred             ceEEEcccchhhhhhcC
Q psy1413         391 DKTIDCSGIESTIKLGM  407 (408)
Q Consensus       391 d~i~d~~g~~~~~~~~~  407 (408)
                      |++||++|....++.++
T Consensus       240 D~vi~~~g~~~~~~~~~  256 (347)
T 2hcy_A          240 HGVINVSVSEAAIEAST  256 (347)
T ss_dssp             EEEEECSSCHHHHHHHT
T ss_pred             CEEEECCCcHHHHHHHH
Confidence            99999999876666554

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=99.94  E-value=7.7e-28  Score=230.65  Aligned_cols=224  Identities=17%  Similarity=0.277  Sum_probs=168.3

Q ss_pred             CCeeeecccchhhhhcCCCCC-CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~-~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------   60 (408)
                      |+++|||++|++.+. |.++. ....+|.++|||++|+|+++|++|++|++||||+..+..                   
T Consensus        48 v~a~gi~~~D~~~~~-g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~  126 (359)
T 1h2b_A           48 IAGAGVCHTDLHLVQ-GMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENL  126 (359)
T ss_dssp             EEEEECCHHHHHHHH-TTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTC
T ss_pred             EEEEEecccchHHHh-CCCccccCCCCCeecCcCceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCc
Confidence            479999999999985 32210 023679999999999999999999999999999765421                   


Q ss_pred             --------------ccccCCcceeccceeeecccc---cCCCCCCcceEEEEee-eee-cCCeEEEEccCcccccccccc
Q psy1413          61 --------------RNVCLSPILRRRFSLRFREQK---PIEDPDDHEVLLEMHC-VGI-CGSDVHYLTHGQIGDFRLSDP  121 (408)
Q Consensus        61 --------------~~~~~~~~~~~p~~~~~~~~~---~lp~~~~~~~~~~~~~-~~~-~g~~vlv~g~G~vG~~~i~~a  121 (408)
                                    ...+...++..|+++++++++   +++....+++.+.... ..+ .+++|+|+|+|++|++++|++
T Consensus       127 ~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqla  206 (359)
T 1h2b_A          127 EFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLL  206 (359)
T ss_dssp             BCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHH
T ss_pred             cccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHH
Confidence                          123334556667777774444   3443333333221111 223 578999999999999999999


Q ss_pred             ccc-cC-----------------------------------------cceeEEEccCchH-----HHHhhccCCcEEEEE
Q psy1413         122 MIV-GH-----------------------------------------EASGIVSKVGAKV-----KHLKATRPGGCLVIV  154 (408)
Q Consensus       122 ~~~-G~-----------------------------------------~~~~vv~~~g~~~-----~~~~~l~~gG~iv~~  154 (408)
                      +.+ |+                                         .++.+++++|...     +++++  ++|+++.+
T Consensus       207 k~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~  284 (359)
T 1h2b_A          207 KVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIV  284 (359)
T ss_dssp             HHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEEC
T ss_pred             HHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccchHHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEE
Confidence            888 75                                         1455677777652     34555  99999999


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      |.+..+ .++...++.|++++.|++... ++++++++++++|++++  ++ ++|||+|+++||+.+.+++. .+|++++
T Consensus       285 g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~--~i-~~~~l~~~~~A~~~~~~~~~-~gKvvv~  358 (359)
T 1h2b_A          285 GYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGKVRV--EV-DIHKLDEINDVLERLEKGEV-LGRAVLI  358 (359)
T ss_dssp             CCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCC--CE-EEEEGGGHHHHHHHHHTTCC-SSEEEEE
T ss_pred             eCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCcc--eE-EEEeHHHHHHHHHHHHcCCC-ceEEEee
Confidence            987666 788888999999999998776 78999999999999864  57 99999999999999988764 5677765

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=99.94  E-value=3.5e-28  Score=234.75  Aligned_cols=224  Identities=21%  Similarity=0.275  Sum_probs=171.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCC------CCCCCCEEEEccC---------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK------HLKVDNQTRFVPE---------------   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~------~~~vGdrV~~~~~---------------   59 (408)
                      |+++|||++|++.+. |.++  ...+|.++|||++|+|+++| +|+      +|++||||++.+.               
T Consensus        49 v~a~gi~~~D~~~~~-G~~~--~~~~P~v~GhE~~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~  124 (380)
T 1vj0_A           49 ILSAGVCGSDVHMFR-GEDP--RVPLPIILGHEGAGRVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEP  124 (380)
T ss_dssp             EEEEEECHHHHHHHT-TCCT--TCCSSBCCCCEEEEEEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCG
T ss_pred             EeEEeecccchHHhc-CCCC--CCCCCcccCcCcEEEEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCc
Confidence            579999999999885 4322  24689999999999999999 999      9999999997531               


Q ss_pred             ---------------------------cccc-cCCcceeccceeeecccccCCCCCCcceEEEEeeee-e-cCCeEEEEc
Q psy1413          60 ---------------------------FRNV-CLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-I-CGSDVHYLT  109 (408)
Q Consensus        60 ---------------------------~~~~-~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~-~g~~vlv~g  109 (408)
                                                 |... +...++..|+++++++.+++..++.+++.+. .... + .+++|+|+|
T Consensus       125 ~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~Aa~~~~~~ta~~al-~~~~~~~~g~~VlV~G  203 (380)
T 1vj0_A          125 YLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAF-DEYPESFAGKTVVIQG  203 (380)
T ss_dssp             GGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHHHHHHHTTHHHHHHHHH-HTCSSCCBTCEEEEEC
T ss_pred             ccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCChHHhHhhhcHHHHHHHHH-HhcCCCCCCCEEEEEC
Confidence                                       1123 4455566677777641444443544444322 1223 3 578999999


Q ss_pred             cCccccccccccccccC----------------------------------------------cceeEEEccCch---HH
Q psy1413         110 HGQIGDFRLSDPMIVGH----------------------------------------------EASGIVSKVGAK---VK  140 (408)
Q Consensus       110 ~G~vG~~~i~~a~~~G~----------------------------------------------~~~~vv~~~g~~---~~  140 (408)
                      +|++|++++|+++.+|+                                              .++.+++++|..   .+
T Consensus       204 aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~  283 (380)
T 1vj0_A          204 AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLE  283 (380)
T ss_dssp             CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHH
T ss_pred             cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHH
Confidence            99999999999887772                                              134456666643   26


Q ss_pred             HHhhccCCcEEEEEccCC-C-CcccCHHH-HHhcCcEEEEeecCC-CcHHHHHHHHHc--CCCCCCCceeeeeccchHHH
Q psy1413         141 HLKATRPGGCLVIVGAGS-Q-DVKIPLVL-TMTKEIDIRGVFRYA-NDYPIALAMVAS--GKVDVKKLITHNYLLEDTLH  214 (408)
Q Consensus       141 ~~~~l~~gG~iv~~G~~~-~-~~~~~~~~-~~~~~~~l~g~~~~~-~~~~~~~~l~~~--g~~~~~~~i~~~~~l~~~~~  214 (408)
                      ++++++++|+++.+|... . +.+++... ++.|++++.|++... ++++++++++++  |++  +++++++|||+|+++
T Consensus       284 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~~~g~l--~~~i~~~~~l~~~~~  361 (380)
T 1vj0_A          284 GSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLL--SKLITHRLPLKEANK  361 (380)
T ss_dssp             HHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCCHHHHHHHHHHHHTCHHHH--GGGCCEEEEGGGHHH
T ss_pred             HHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecCCHHHHHHHHHHHHhhcCCe--eeEEEEEEeHHHHHH
Confidence            799999999999999876 5 67888888 899999999998766 789999999999  988  678999999999999


Q ss_pred             HHHHHHcCCCCceEEEEEc
Q psy1413         215 AFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       215 a~~~~~~~~~~~~kvvi~~  233 (408)
                      ||+.+.+++. . |+++++
T Consensus       362 A~~~~~~~~~-~-Kvvl~~  378 (380)
T 1vj0_A          362 ALELMESREA-L-KVILYP  378 (380)
T ss_dssp             HHHHHHHTSC-S-CEEEEC
T ss_pred             HHHHHhcCCC-c-eEEEEe
Confidence            9999988764 3 888764

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=99.94  E-value=8.8e-27  Score=222.37  Aligned_cols=237  Identities=26%  Similarity=0.438  Sum_probs=196.7

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCcccc------ccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGD------FRLSDPMIVGHEASGIVSKVGAKVKHLKATRP  147 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~------~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~  147 (408)
                      .+.+ ++.+.|.+.+.++++.+.++++++.++.+.. |....      ....++..+|.|+.|+|..+|+..+.++.   
T Consensus        12 ~l~~-~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v---   86 (347)
T 1jvb_A           12 PLSL-QEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQ-GRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK---   86 (347)
T ss_dssp             CCEE-EECCCCCCCTTCEEEEEEEEEECTHHHHHTT-TEETTEETTTTTCCCSCEECCCEEEEEEEEECTTCCSCCT---
T ss_pred             CeEE-EEeeCCCCCCCeEEEEEEEEEecHHHHHHhc-CCCcccccccccCCCCCccccccceEEEEEECCCCCCCCC---
Confidence            3556 5677888888999999999999988776542 21110      01346778999999999999976444444   


Q ss_pred             CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413         148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI  227 (408)
Q Consensus       148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~  227 (408)
                                                                                                      
T Consensus        87 --------------------------------------------------------------------------------   86 (347)
T 1jvb_A           87 --------------------------------------------------------------------------------   86 (347)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeecc-ceeeeCCCCCCcccccccc-hhhhh
Q psy1413         228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAA-DFCHKLPDHVSLEEGALLE-PLSVG  305 (408)
Q Consensus       228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~p~~~~~~~aa~~~-~~~~~  305 (408)
                           +|+|...+..+|+.|.+|++|++++|++...+|. ..+|+|++|+.+++ +.++++ ++++++++++++ ...|+
T Consensus        87 -----GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta  159 (347)
T 1jvb_A           87 -----GDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITT  159 (347)
T ss_dssp             -----TCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHH
T ss_pred             -----CCEEEeCCCCCCCCChhhhCcCcccCcccccccc-cCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHHH
Confidence                 8999877888999999999999999998877775 35799999999999 999999 999999988776 56678


Q ss_pred             hhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHh-CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413         306 VHACRRAGVTLGSKVLITGA-GPIGLVTLLTARAL-GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       306 ~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~-Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      |+++++..+++++++||+|+ |++|++++|+++.+ |++ |+++++++++++.++++|++.++++.+    ++..+.+.+
T Consensus       160 ~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~-Vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~  234 (347)
T 1jvb_A          160 YRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGAT-IIGVDVREEAVEAAKRAGADYVINASM----QDPLAEIRR  234 (347)
T ss_dssp             HHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCE-EEEEESSHHHHHHHHHHTCSEEEETTT----SCHHHHHHH
T ss_pred             HHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCe-EEEEcCCHHHHHHHHHhCCCEEecCCC----ccHHHHHHH
Confidence            88888888999999999999 69999999999999 996 999999999999999999999999876    566677777


Q ss_pred             HhcCCCCceEEEcccchhhhhhcC
Q psy1413         384 LLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       384 ~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      ++..+++|++||++|+..+++.++
T Consensus       235 ~~~~~~~d~vi~~~g~~~~~~~~~  258 (347)
T 1jvb_A          235 ITESKGVDAVIDLNNSEKTLSVYP  258 (347)
T ss_dssp             HTTTSCEEEEEESCCCHHHHTTGG
T ss_pred             HhcCCCceEEEECCCCHHHHHHHH
Confidence            775248999999999886766654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=99.94  E-value=1.2e-27  Score=228.31  Aligned_cols=225  Identities=20%  Similarity=0.236  Sum_probs=168.2

Q ss_pred             CCeeeecccchhhhhcCCCCC------CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGD------FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF--------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~------~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~--------------   60 (408)
                      |+++|||++|++.+. |.++.      ...++|.++|||++|+|+++|++|++|++||||+..+..              
T Consensus        32 v~a~gi~~~D~~~~~-g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~  110 (347)
T 1jvb_A           32 VEAAGVCHSDVHMRQ-GRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEH  110 (347)
T ss_dssp             EEEEEECTHHHHHTT-TEETTEETTTTTCCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGG
T ss_pred             EEEEEecHHHHHHhc-CCCcccccccccCCCCCccccccceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcc
Confidence            468999999999884 32221      124689999999999999999999999999999765421              


Q ss_pred             -------------------ccccC-CcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccC-ccccccc
Q psy1413          61 -------------------RNVCL-SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHG-QIGDFRL  118 (408)
Q Consensus        61 -------------------~~~~~-~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G-~vG~~~i  118 (408)
                                         ...+. ..++.. ++++++++++++....+++.+.. ...+ .+++++|+|+| ++|++++
T Consensus       111 ~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~  188 (347)
T 1jvb_A          111 LCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAV  188 (347)
T ss_dssp             GCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHH
T ss_pred             cCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHH
Confidence                               12222 344444 55555444444433333332211 1222 47889999976 9999999


Q ss_pred             cccccc-cC------------------------------------------cceeEEEccCch---HHHHhhccCCcEEE
Q psy1413         119 SDPMIV-GH------------------------------------------EASGIVSKVGAK---VKHLKATRPGGCLV  152 (408)
Q Consensus       119 ~~a~~~-G~------------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv  152 (408)
                      |+++.. |+                                          .++.+++++|..   .+++++++++|+++
T Consensus       189 ~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv  268 (347)
T 1jvb_A          189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYV  268 (347)
T ss_dssp             HHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEE
T ss_pred             HHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence            988887 75                                          135567777755   26789999999999


Q ss_pred             EEccCC-CCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         153 IVGAGS-QDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       153 ~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                      .+|.+. .+ +++...++.|++++.|++... ++++++++++++|+++  ++++++|||+|+++||+.+.+++. .+|++
T Consensus       269 ~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~-~gKvv  344 (347)
T 1jvb_A          269 MVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVK--PMITKTMKLEEANEAIDNLENFKA-IGRQV  344 (347)
T ss_dssp             ECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHTTSSC--CCCEEEEEGGGHHHHHHHHHTTCC-CSEEE
T ss_pred             EECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHHHHHHcCCCC--ceEEEEEcHHHHHHHHHHHHCCCC-cceEE
Confidence            999876 56 888888999999999998776 7899999999999985  578999999999999999988764 46777


Q ss_pred             EE
Q psy1413         231 IH  232 (408)
Q Consensus       231 i~  232 (408)
                      ++
T Consensus       345 l~  346 (347)
T 1jvb_A          345 LI  346 (347)
T ss_dssp             EE
T ss_pred             ec
Confidence            65

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.94  E-value=4.4e-27  Score=226.02  Aligned_cols=231  Identities=23%  Similarity=0.297  Sum_probs=188.8

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV  152 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv  152 (408)
                      +.+.+ ++.+.|.+.+.++++.+.++++++.++.+.. |...  ...++..+|.|+.|+|..+|+..+.++.        
T Consensus        33 ~~l~~-~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~--~~~~P~v~GhE~~G~V~~vG~~V~~~~v--------  100 (369)
T 1uuf_A           33 QPLEP-MDITRREPGPNDVKIEIAYCGVCHSDLHQVR-SEWA--GTVYPCVPGHEIVGRVVAVGDQVEKYAP--------  100 (369)
T ss_dssp             SCCEE-EECCCCCCCTTEEEEEEEEEECCHHHHHHHH-CTTS--CCCSSBCCCCCEEEEEEEECTTCCSCCT--------
T ss_pred             CCcEE-EEecCCCCCCCeEEEEEEEEeecHHHHHHhc-CCCC--CCCCCeecccCceEEEEEECCCCCCCCC--------
Confidence            45666 5677888888999999999999988776542 2111  1245678999999999999976544444        


Q ss_pred             EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                                                                                                      
T Consensus       101 --------------------------------------------------------------------------------  100 (369)
T 1uuf_A          101 --------------------------------------------------------------------------------  100 (369)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCceeecCC-CcccccccccCCcccccccee-ec-------ccCCCCccceeEEeeccceeeeCCCC-CCcccccccc-h
Q psy1413         233 CDRVAIEPG-VPCRTCTYCKEGRYNLCRQIF-FC-------ATPPDHGNLSRYYRHAADFCHKLPDH-VSLEEGALLE-P  301 (408)
Q Consensus       233 ~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~g~~~~~~~~~~~~~~~~p~~-~~~~~aa~~~-~  301 (408)
                      +|+|.+.|. ..|+.|.+|++|.+++|++.. .+       |. ...|+|++|+.++++.++++|++ ++++++++++ .
T Consensus       101 GDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~-~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~  179 (369)
T 1uuf_A          101 GDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPG-HTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA  179 (369)
T ss_dssp             TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTS-BCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTH
T ss_pred             CCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCC-CCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhh
Confidence            999988776 469999999999999998752 11       21 34699999999999999999999 9999988776 6


Q ss_pred             hhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHH
Q psy1413         302 LSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHI  381 (408)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~  381 (408)
                      +.|+|+++.+..+++++++||+|+|++|++++|+|+.+|++ |+++++++++++.++++|++.++|+++    ++..   
T Consensus       180 ~~tA~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~-Vi~~~~~~~~~~~a~~lGa~~vi~~~~----~~~~---  251 (369)
T 1uuf_A          180 GITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAH-VVAFTTSEAKREAAKALGADEVVNSRN----ADEM---  251 (369)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHTCSEEEETTC----HHHH---
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCcEEecccc----HHHH---
Confidence            77889999778899999999999999999999999999998 999999999999999999999999876    4432   


Q ss_pred             HHHhcCCCCceEEEcccchhhhhhc
Q psy1413         382 IELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       382 ~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      .++.  +++|++|||+|++.+++.+
T Consensus       252 ~~~~--~g~Dvvid~~g~~~~~~~~  274 (369)
T 1uuf_A          252 AAHL--KSFDFILNTVAAPHNLDDF  274 (369)
T ss_dssp             HTTT--TCEEEEEECCSSCCCHHHH
T ss_pred             HHhh--cCCCEEEECCCCHHHHHHH
Confidence            2333  5899999999987665554

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=99.94  E-value=2.2e-27  Score=226.58  Aligned_cols=227  Identities=26%  Similarity=0.324  Sum_probs=186.1

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV  152 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv  152 (408)
                      +.+.+ +..++|.+.+.++++.+.++++++.++.+.. |...  ...++..+|+|+.|+|..+|+..+.++.        
T Consensus        15 ~~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~--~~~~p~i~G~E~~G~V~~vG~~v~~~~v--------   82 (348)
T 3two_A           15 EHFKP-HDFSRHAVGPRDVLIDILYAGICHSDIHSAY-SEWK--EGIYPMIPGHEIAGIIKEVGKGVKKFKI--------   82 (348)
T ss_dssp             SCCEE-EEEEECCCCTTEEEEEEEEEEECHHHHHHHT-TSSS--CCCSSBCCCCCEEEEEEEECTTCCSCCT--------
T ss_pred             CCCeE-EEeeCCCCCCCeEEEEEEEeeecccchhhhc-CCCC--CCCCCeecCcceeEEEEEECCCCCCCCC--------
Confidence            34666 6678888899999999999999988776542 2211  2356778999999999999976554554        


Q ss_pred             EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                                                                                                      
T Consensus        83 --------------------------------------------------------------------------------   82 (348)
T 3two_A           83 --------------------------------------------------------------------------------   82 (348)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCceeecCC-CcccccccccCCccccccceeecccCC---------CCccceeEEeeccceeeeCCCCCCcccccccc-h
Q psy1413         233 CDRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCATPP---------DHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-P  301 (408)
Q Consensus       233 ~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~  301 (408)
                      +|+|+..+. .+|+.|.+|++|++++|. ....+...         ..|+|++|+.++++.++++|+++++++|++++ .
T Consensus        83 GdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  161 (348)
T 3two_A           83 GDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCA  161 (348)
T ss_dssp             TCEEEECSEEECCSCSHHHHTTCGGGCT-TCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTH
T ss_pred             CCEEEEeCCcCCCCCChhHhCCCcccCc-ccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhh
Confidence            899987664 689999999999999998 44444322         23999999999999999999999999999887 5


Q ss_pred             hhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHH
Q psy1413         302 LSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHI  381 (408)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~  381 (408)
                      ..|+|+++.+..+++++++||+|+|++|++++|+|+.+|++ |++++++++|++.++++|+++++ .+.    +++.   
T Consensus       162 ~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~v~-~~~----~~~~---  232 (348)
T 3two_A          162 GITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAE-VSVFARNEHKKQDALSMGVKHFY-TDP----KQCK---  232 (348)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCE-EEEECSSSTTHHHHHHTTCSEEE-SSG----GGCC---
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHhcCCCeec-CCH----HHHh---
Confidence            67788899888999999999999999999999999999995 99999999999999999999998 321    2221   


Q ss_pred             HHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         382 IELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       382 ~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                            +++|++|||+|+..+++.++
T Consensus       233 ------~~~D~vid~~g~~~~~~~~~  252 (348)
T 3two_A          233 ------EELDFIISTIPTHYDLKDYL  252 (348)
T ss_dssp             ------SCEEEEEECCCSCCCHHHHH
T ss_pred             ------cCCCEEEECCCcHHHHHHHH
Confidence                  28999999999986666543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=99.94  E-value=2.9e-26  Score=219.91  Aligned_cols=123  Identities=22%  Similarity=0.246  Sum_probs=106.0

Q ss_pred             ccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         271 GNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      |+|++|+.++++.++++|+. +.+.+++..+..|+|+++ +...+++++++||+|+ |++|++++|+++.+|++ |++++
T Consensus       118 G~~aey~~v~~~~~~~~P~~-~~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~-Vi~~~  195 (362)
T 2c0c_A          118 GSFAEYTVVPASIATPVPSV-KPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCH-VIGTC  195 (362)
T ss_dssp             CCSBSEEEEEGGGCEECSSS-CHHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCE-EEEEE
T ss_pred             CcceeEEEEcHHHeEECCCC-chHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCE-EEEEE
Confidence            57899999999999999996 444444545888899998 4568999999999997 99999999999999996 99999


Q ss_pred             cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++++++.++++|++.++++++    +++.+.+++.+ ++++|++|||+|+.
T Consensus       196 ~~~~~~~~~~~~Ga~~~~~~~~----~~~~~~~~~~~-~~g~D~vid~~g~~  242 (362)
T 2c0c_A          196 SSDEKSAFLKSLGCDRPINYKT----EPVGTVLKQEY-PEGVDVVYESVGGA  242 (362)
T ss_dssp             SSHHHHHHHHHTTCSEEEETTT----SCHHHHHHHHC-TTCEEEEEECSCTH
T ss_pred             CCHHHHHHHHHcCCcEEEecCC----hhHHHHHHHhc-CCCCCEEEECCCHH
Confidence            9999999999999999999876    56777777776 56899999999974

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=99.94  E-value=1.6e-26  Score=221.37  Aligned_cols=232  Identities=23%  Similarity=0.369  Sum_probs=187.1

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV  152 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv  152 (408)
                      +.+.+ +..+.|.+.+.++++.+.++++++.++.+.. |...  ...++..+|+|+.|+|..+|+..+.++.        
T Consensus        20 ~~l~~-~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~--~~~~P~v~GhE~~G~V~~vG~~v~~~~v--------   87 (357)
T 2cf5_A           20 GILSP-YTYTLRETGPEDVNIRIICCGICHTDLHQTK-NDLG--MSNYPMVPGHEVVGEVVEVGSDVSKFTV--------   87 (357)
T ss_dssp             CCEEE-EEEECCCCCTTEEEEEEEEEEECHHHHHHHT-CTTT--CCCSSBCCCCEEEEEEEEECSSCCSCCT--------
T ss_pred             CCcEE-EEecCCCCCCCEEEEEEEEEeecchhhhhhc-CCCC--CCCCCeecCcceeEEEEEECCCCCCCCC--------
Confidence            45666 5667788888999999999999988776542 2111  1345778999999999999976544444        


Q ss_pred             EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                                                                                                      
T Consensus        88 --------------------------------------------------------------------------------   87 (357)
T 2cf5_A           88 --------------------------------------------------------------------------------   87 (357)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCceeecCC-CcccccccccCCccccccceeeccc------CCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhh
Q psy1413         233 CDRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCAT------PPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSV  304 (408)
Q Consensus       233 ~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~  304 (408)
                      +|+|.+.+. .+|+.|..|..|.+++|.+..+...      ...+|+|++|+.++++.++++|+++++++++.++ ...|
T Consensus        88 GdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~t  167 (357)
T 2cf5_A           88 GDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVT  167 (357)
T ss_dssp             TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHHH
T ss_pred             CCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHHH
Confidence            899987664 5799999999999999976543211      1257999999999999999999999999988777 6677


Q ss_pred             hhhhhhccCcC-CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHH
Q psy1413         305 GVHACRRAGVT-LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHII  382 (408)
Q Consensus       305 ~~~~~~~~~~~-~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~  382 (408)
                      +|+++.+..++ +++++||+|+|++|+.++|+++.+|++ |+++++++++++.++ ++|+++++++++    .   +.++
T Consensus       168 a~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~-Vi~~~~~~~~~~~~~~~lGa~~vi~~~~----~---~~~~  239 (357)
T 2cf5_A          168 VYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSNKKREEALQDLGADDYVIGSD----Q---AKMS  239 (357)
T ss_dssp             HHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCE-EEEEESSTTHHHHHHTTSCCSCEEETTC----H---HHHH
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHcCCceeecccc----H---HHHH
Confidence            88888878888 999999999999999999999999995 999999999999887 899999999865    2   2455


Q ss_pred             HHhcCCCCceEEEcccchhhhhhc
Q psy1413         383 ELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       383 ~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      +++  .++|++|||+|+..+++.+
T Consensus       240 ~~~--~g~D~vid~~g~~~~~~~~  261 (357)
T 2cf5_A          240 ELA--DSLDYVIDTVPVHHALEPY  261 (357)
T ss_dssp             HST--TTEEEEEECCCSCCCSHHH
T ss_pred             Hhc--CCCCEEEECCCChHHHHHH
Confidence            555  3799999999987655544

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=99.93  E-value=3.4e-26  Score=226.01  Aligned_cols=242  Identities=23%  Similarity=0.270  Sum_probs=196.1

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEE-cc-----------Cccccc--ccccc-ccccCcceeEEEccCc
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYL-TH-----------GQIGDF--RLSDP-MIVGHEASGIVSKVGA  137 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~-g~-----------G~vG~~--~i~~a-~~~G~~~~~vv~~~g~  137 (408)
                      ..+.+ +..++|.+.+.++++.+.++++++.++.+. +.           |..+..  ...++ ..+|.|+.|+|..+|+
T Consensus        56 ~~l~~-~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~  134 (456)
T 3krt_A           56 KSIHL-DDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGP  134 (456)
T ss_dssp             HHCEE-EEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCHHHHTTCCSEEECCSCCEEEEEEECT
T ss_pred             CCcEE-EEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhccccccccccCCCCcccccceeEEEEEEECC
Confidence            45666 677888888999999999999998775331 10           111111  12344 4789999999999997


Q ss_pred             hHHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHH
Q psy1413         138 KVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFE  217 (408)
Q Consensus       138 ~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~  217 (408)
                      ..+.++.                                                                         
T Consensus       135 ~v~~~~v-------------------------------------------------------------------------  141 (456)
T 3krt_A          135 GVNAWQA-------------------------------------------------------------------------  141 (456)
T ss_dssp             TCCSCCT-------------------------------------------------------------------------
T ss_pred             CCCCCCC-------------------------------------------------------------------------
Confidence            6544444                                                                         


Q ss_pred             HHHcCCCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCccccc
Q psy1413         218 TAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGA  297 (408)
Q Consensus       218 ~~~~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa  297 (408)
                                     +|+|...+ ..|..|..|..+.++.|.+...+|....+|+|++|++++++.++++|+++++++++
T Consensus       142 ---------------GdrV~~~~-~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa  205 (456)
T 3krt_A          142 ---------------GDEVVAHC-LSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAA  205 (456)
T ss_dssp             ---------------TCEEEECC-EECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEGGGEEECCTTSCHHHHH
T ss_pred             ---------------CCEEEEeC-CcccccccccccccccCccccccccCCCCCcccceEEechHHeeECCCCCCHHHHH
Confidence                           88888754 36888889999999999999999987778999999999999999999999999999


Q ss_pred             ccc-hhhhhhhhhhc---cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCC
Q psy1413         298 LLE-PLSVGVHACRR---AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNH  372 (408)
Q Consensus       298 ~~~-~~~~~~~~~~~---~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~  372 (408)
                      .++ ++.|+|+++..   ..+++++++||+|+ |++|++++|+++.+|++ +++++++++|++.++++|++.++++.+..
T Consensus       206 ~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~-vi~~~~~~~~~~~~~~lGa~~vi~~~~~d  284 (456)
T 3krt_A          206 APGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGAN-PICVVSSPQKAEICRAMGAEAIIDRNAEG  284 (456)
T ss_dssp             SSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHTCCEEEETTTTT
T ss_pred             HhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCe-EEEEECCHHHHHHHHhhCCcEEEecCcCc
Confidence            877 67889988733   68999999999999 99999999999999997 77788999999999999999999987621


Q ss_pred             C-------------hHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         373 S-------------LEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       373 ~-------------~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      .             .+++.+.++++++++++|++|||+|+ .+++.+
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-~~~~~~  330 (456)
T 3krt_A          285 YRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-ETFGAS  330 (456)
T ss_dssp             CCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH-HHHHHH
T ss_pred             ccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc-hhHHHH
Confidence            1             13456888899988899999999998 455443

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=99.93  E-value=1e-27  Score=229.64  Aligned_cols=223  Identities=19%  Similarity=0.180  Sum_probs=169.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCC---CccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc----------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSD---PMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR----------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~---P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~----------------   61 (408)
                      |+++|||++|++++. |..+  ..++   |.++|||++| |+++|++ ++|++||||++.+...                
T Consensus        32 v~a~gi~~~D~~~~~-g~~~--~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~  106 (357)
T 2b5w_A           32 TLRVGVCGTDHEVIA-GGHG--GFPEGEDHLVLGHEAVG-VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDM  106 (357)
T ss_dssp             EEEEEECHHHHHHHH-SCST--TSCTTCSEEECCSEEEE-EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGG
T ss_pred             EeEEeechhcHHHHc-CCCC--CCCCCCCCcccCceeEE-EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCccc
Confidence            469999999999985 3222  1356   9999999999 9999999 9999999999764221                


Q ss_pred             ----------------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cC------CeEEEEccCc
Q psy1413          62 ----------------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CG------SDVHYLTHGQ  112 (408)
Q Consensus        62 ----------------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g------~~vlv~g~G~  112 (408)
                                            ..+...++..|++++  +.+.++.++.+++.+. ....+ .+      ++|+|+|+|+
T Consensus       107 C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~--~~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~  183 (357)
T 2b5w_A          107 APDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA--ELGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGS  183 (357)
T ss_dssp             CCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS--TTGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSH
T ss_pred             CCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc--hhhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCH
Confidence                                  122233444555555  2344444444444222 12222 46      8999999999


Q ss_pred             ccccc-cccc-ccccCc------------------------------------------ceeEEEccCch---HHHHhhc
Q psy1413         113 IGDFR-LSDP-MIVGHE------------------------------------------ASGIVSKVGAK---VKHLKAT  145 (408)
Q Consensus       113 vG~~~-i~~a-~~~G~~------------------------------------------~~~vv~~~g~~---~~~~~~l  145 (408)
                      +|+++ +|++ +.+|+.                                          ++.+++++|..   .++++++
T Consensus       184 vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l  263 (357)
T 2b5w_A          184 LGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQAL  263 (357)
T ss_dssp             HHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHE
T ss_pred             HHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHH
Confidence            99999 9999 876652                                          24456666654   2689999


Q ss_pred             cCCcEEEEEccCC-CCcccCHHHH----HhcCcEEEEeecCC-CcHHHHHHHHHcC--CCCCCCceeeeeccchHHHHHH
Q psy1413         146 RPGGCLVIVGAGS-QDVKIPLVLT----MTKEIDIRGVFRYA-NDYPIALAMVASG--KVDVKKLITHNYLLEDTLHAFE  217 (408)
Q Consensus       146 ~~gG~iv~~G~~~-~~~~~~~~~~----~~~~~~l~g~~~~~-~~~~~~~~l~~~g--~~~~~~~i~~~~~l~~~~~a~~  217 (408)
                      +++|+++.+|... .+.+++...+    +.|++++.|++... ++++++++++++|  ++ ++++++++|||+|+++||+
T Consensus       264 ~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l~~~~~A~~  342 (357)
T 2b5w_A          264 APNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFTKLPKWF-LEDLVTGVHPLSEFEAAFD  342 (357)
T ss_dssp             EEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCHHHHHHHHHHHHHSCHHH-HHHHEEEEEEGGGGGGGGC
T ss_pred             hcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCHHHHHHHHHHHHhCchhh-hhhhcceeecHHHHHHHHH
Confidence            9999999999876 6677888888    89999999998776 7899999999999  87 7889999999999999999


Q ss_pred             HHHcCCCCceEEEEEcCce
Q psy1413         218 TAKTGAGNAIKVMIHCDRV  236 (408)
Q Consensus       218 ~~~~~~~~~~kvvi~~~~v  236 (408)
                      .+    ...+|++++++.|
T Consensus       343 ~~----~~~gKvvi~~~~~  357 (357)
T 2b5w_A          343 DD----DTTIKTAIEFSTV  357 (357)
T ss_dssp             CS----TTCCEEEEECCCC
T ss_pred             Hh----CCCceEEEEecCC
Confidence            88    2468999887653

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=99.93  E-value=7.3e-26  Score=217.41  Aligned_cols=232  Identities=23%  Similarity=0.345  Sum_probs=185.8

Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL  151 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i  151 (408)
                      ++.+.. +..+.|.+.+.++++.+.++++++.++.+.. |...  ...++..+|.|+.|+|..+|+..+.++.       
T Consensus        26 ~~~l~~-~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~--~~~~P~v~GhE~~G~V~~vG~~V~~~~v-------   94 (366)
T 1yqd_A           26 SGHLSP-FNFSRRATGEEDVRFKVLYCGVCHSDLHSIK-NDWG--FSMYPLVPGHEIVGEVTEVGSKVKKVNV-------   94 (366)
T ss_dssp             TCCEEE-EEEEECCCCTTEEEEEEEEEEECHHHHHHHH-TSSS--CCCSSBCCCCCEEEEEEEECTTCCSCCT-------
T ss_pred             CCCcEE-EEccCCCCCCCeEEEEEEEEeechhhHHHHc-CCCC--CCCCCEecccceEEEEEEECCCCCcCCC-------
Confidence            345566 5567788888999999999999988776542 2111  1345678999999999999976544444       


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                                                                                                      
T Consensus        95 --------------------------------------------------------------------------------   94 (366)
T 1yqd_A           95 --------------------------------------------------------------------------------   94 (366)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCceeecCC-CcccccccccCCccccccceeeccc------CCCCccceeEEeeccceeeeCCCCCCcccccccc-hhh
Q psy1413         232 HCDRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCAT------PPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLS  303 (408)
Q Consensus       232 ~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~  303 (408)
                       +|+|.+.+. .+|+.|..|..|++++|.+..+...      ...+|+|++|+.++++.++++|+++++++++.++ ...
T Consensus        95 -GDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~  173 (366)
T 1yqd_A           95 -GDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGI  173 (366)
T ss_dssp             -TCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHH
T ss_pred             -CCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHH
Confidence             999987664 5899999999999999965432111      1256999999999999999999999999988777 667


Q ss_pred             hhhhhhhccCcC-CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHH
Q psy1413         304 VGVHACRRAGVT-LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHI  381 (408)
Q Consensus       304 ~~~~~~~~~~~~-~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~  381 (408)
                      |+|+++++..++ +++++||+|+|++|++++|+++.+|++ |+++++++++++.++ ++|++.++|+++    .   +.+
T Consensus       174 ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~-Vi~~~~~~~~~~~~~~~lGa~~v~~~~~----~---~~~  245 (366)
T 1yqd_A          174 TVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSK-VTVISTSPSKKEEALKNFGADSFLVSRD----Q---EQM  245 (366)
T ss_dssp             HHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCGGGHHHHHHTSCCSEEEETTC----H---HHH
T ss_pred             HHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhcCCceEEeccC----H---HHH
Confidence            888888777888 999999999999999999999999996 999999999998876 899999999865    3   235


Q ss_pred             HHHhcCCCCceEEEcccchhhhhh
Q psy1413         382 IELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       382 ~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      ++++  .++|++||++|+..+++.
T Consensus       246 ~~~~--~~~D~vid~~g~~~~~~~  267 (366)
T 1yqd_A          246 QAAA--GTLDGIIDTVSAVHPLLP  267 (366)
T ss_dssp             HHTT--TCEEEEEECCSSCCCSHH
T ss_pred             HHhh--CCCCEEEECCCcHHHHHH
Confidence            5555  379999999998755444

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=99.93  E-value=1.9e-26  Score=221.61  Aligned_cols=226  Identities=22%  Similarity=0.355  Sum_probs=182.7

Q ss_pred             eeecccccCCCCCC-cceEEEEeeeeecCCeEEEEccC--ccccccccc---cccccCcceeEEEccCchHHHHhhccCC
Q psy1413          75 LRFREQKPIEDPDD-HEVLLEMHCVGICGSDVHYLTHG--QIGDFRLSD---PMIVGHEASGIVSKVGAKVKHLKATRPG  148 (408)
Q Consensus        75 ~~~~~~~~lp~~~~-~~~~~~~~~~~~~g~~vlv~g~G--~vG~~~i~~---a~~~G~~~~~vv~~~g~~~~~~~~l~~g  148 (408)
                      +.+ +..++|.+.+ .++++.+.++++++.++.+.. |  ...  ...+   +..+|+|+.|+|+.  +. +.++.    
T Consensus        13 l~~-~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~~~--~~~~~~~p~v~G~E~~G~V~~--~~-~~~~~----   81 (366)
T 2cdc_A           13 VQV-KDVDEKKLDSYGKIKIRTIYNGICGADREIVN-GKLTLS--TLPKGKDFLVLGHEAIGVVEE--SY-HGFSQ----   81 (366)
T ss_dssp             CEE-EECCGGGSCCCSSEEEEEEEEEECHHHHHHHT-TCC---------CCSCEECCSEEEEEECS--CC-SSCCT----
T ss_pred             eEE-EECcCCCCCCCCEEEEEEEEEeeccccHHHHc-CCCCCC--CCCcCCCCCcCCcceEEEEEe--CC-CCCCC----
Confidence            566 5667788888 999999999999987766542 2  111  1234   67789999999988  22 33444    


Q ss_pred             cEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceE
Q psy1413         149 GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIK  228 (408)
Q Consensus       149 G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~k  228 (408)
                                                                                                      
T Consensus        82 --------------------------------------------------------------------------------   81 (366)
T 2cdc_A           82 --------------------------------------------------------------------------------   81 (366)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEcCceeecCCCcccccccccCCccccccceeec--ccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhh
Q psy1413         229 VMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC--ATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGV  306 (408)
Q Consensus       229 vvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~  306 (408)
                          +|+|...+..+|+.|.+|++|++++|.+...+  |....+|+|++|++++++.++++|++++ ++|++..++.|++
T Consensus        82 ----GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aal~~~~~ta~  156 (366)
T 2cdc_A           82 ----GDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIE  156 (366)
T ss_dssp             ----TCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGGGHHHHHHHH
T ss_pred             ----CCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhhhcCcHHHHH
Confidence                99999999889999999999999999987766  4322579999999999999999999999 8888767899999


Q ss_pred             hhhh-----ccCcC--C-------CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh---hhHHHHHHcCCCeEEecC
Q psy1413         307 HACR-----RAGVT--L-------GSKVLITGAGPIGLVTLLTARALGASRVVITDILE---HKLKTAKEMGADATVLID  369 (408)
Q Consensus       307 ~~~~-----~~~~~--~-------~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~---~~~~~~~~~ga~~~i~~~  369 (408)
                      +++.     +..++  +       ++++||+|+|++|++++|+++.+|+ +|+++++++   ++++.++++|++.+ | +
T Consensus       157 ~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-~  233 (366)
T 2cdc_A          157 KSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-N-S  233 (366)
T ss_dssp             HHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-E-C
T ss_pred             HHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-c-h
Confidence            9997     78888  8       9999999999999999999999999 599999998   89999999999988 7 4


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhh-hhc
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI-KLG  406 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~-~~~  406 (408)
                      +     ++.+.+++ +. +++|++||++|+...+ +.+
T Consensus       234 ~-----~~~~~~~~-~~-~~~d~vid~~g~~~~~~~~~  264 (366)
T 2cdc_A          234 S-----NGYDKLKD-SV-GKFDVIIDATGADVNILGNV  264 (366)
T ss_dssp             T-----TCSHHHHH-HH-CCEEEEEECCCCCTHHHHHH
T ss_pred             H-----HHHHHHHH-hC-CCCCEEEECCCChHHHHHHH
Confidence            3     33445555 54 6899999999987665 544

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=99.93  E-value=1e-26  Score=229.48  Aligned_cols=230  Identities=19%  Similarity=0.208  Sum_probs=168.6

Q ss_pred             CCeeeecccchhhhhc------------CCCCCC--CCCCC-ccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc----
Q psy1413           1 MHCVGICGSDVHYLTH------------GQIGDF--RLSDP-MIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR----   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~------------g~~~~~--~~~~P-~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~----   61 (408)
                      |+++|||++|++....            +..+.+  ..++| .++|||++|+|+++|++|++|++||||++.+...    
T Consensus        69 V~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~  148 (447)
T 4a0s_A           69 VMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQE  148 (447)
T ss_dssp             EEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTS
T ss_pred             EEEEEECcHHhhhhccCcccchhhhhhhcccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcc
Confidence            5799999999864311            111111  12456 7999999999999999999999999999765321    


Q ss_pred             -----------------------------cccCCcceeccceeeecccccCCCCCCcceEEEEe--eeee-cCCeEEEEc
Q psy1413          62 -----------------------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMH--CVGI-CGSDVHYLT  109 (408)
Q Consensus        62 -----------------------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~--~~~~-~g~~vlv~g  109 (408)
                                                   ..+...++..|+++++++++.++.++.+++.+...  ...+ .+++|+|+|
T Consensus       149 ~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~G  228 (447)
T 4a0s_A          149 PATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWG  228 (447)
T ss_dssp             GGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETT
T ss_pred             cccccccccccccccccccCCCCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEEC
Confidence                                         22233445566666665555454444444322211  1223 578999999


Q ss_pred             c-CccccccccccccccCc-----------------------------------------------------------ce
Q psy1413         110 H-GQIGDFRLSDPMIVGHE-----------------------------------------------------------AS  129 (408)
Q Consensus       110 ~-G~vG~~~i~~a~~~G~~-----------------------------------------------------------~~  129 (408)
                      + |++|++++|+++.+|+.                                                           ++
T Consensus       229 asG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~D  308 (447)
T 4a0s_A          229 ASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPD  308 (447)
T ss_dssp             TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCS
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCce
Confidence            6 99999999988876651                                                           34


Q ss_pred             eEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceee
Q psy1413         130 GIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITH  205 (408)
Q Consensus       130 ~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~  205 (408)
                      .+++++|...  .++++++++|+++.+|.... ...++...++++++++.|++... .++.++++++++|+++  +++++
T Consensus       309 vvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~--~~i~~  386 (447)
T 4a0s_A          309 IVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVV--PAMSA  386 (447)
T ss_dssp             EEEECSCHHHHHHHHHHSCTTCEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSC--CCEEE
T ss_pred             EEEECCCchHHHHHHHHHhcCCEEEEEecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCcc--cceeE
Confidence            4566666532  67899999999999997755 56788888999999999998887 7899999999999985  57999


Q ss_pred             eeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         206 NYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       206 ~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      +|||+|+++||+.+.+++. .+|+++..
T Consensus       387 ~~~l~~~~~A~~~~~~~~~-~GKvvv~~  413 (447)
T 4a0s_A          387 VYPLAEAAEACRVVQTSRQ-VGKVAVLC  413 (447)
T ss_dssp             EEEGGGHHHHHHHHHTTCC-SSEEEEES
T ss_pred             EEcHHHHHHHHHHHhcCCC-ceEEEEEe
Confidence            9999999999999988764 45666664

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=99.93  E-value=8.8e-26  Score=216.69  Aligned_cols=226  Identities=22%  Similarity=0.328  Sum_probs=186.7

Q ss_pred             ccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcE
Q psy1413          71 RRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGC  150 (408)
Q Consensus        71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~  150 (408)
                      .|+.+.+ ++.++|.+.+.++++.+.++++++.++.+.. |... ....++..+|.|+.|+|..+|+..+.++.      
T Consensus        37 ~~~~l~~-~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~-~~~~~P~v~GhE~~G~V~~vG~~v~~~~v------  107 (363)
T 3uog_A           37 APHDLKL-AERPVPEAGEHDIIVRTLAVSLNYRDKLVLE-TGMG-LDLAFPFVPASDMSGVVEAVGKSVTRFRP------  107 (363)
T ss_dssp             TTTCCEE-EEEECCCCCTTEEEEEEEEEECCHHHHHHHH-HCTT-CCCCSSBCCCCEEEEEEEEECTTCCSCCT------
T ss_pred             CCCCcEE-EeeeCCCCCCCEEEEEEEEEecCHHHHHHhc-CCCC-CCCCCCcCcccceEEEEEEECCCCCCCCC------
Confidence            4567777 6678899999999999999999988776542 1111 12456778999999999999976544444      


Q ss_pred             EEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         151 LVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       151 iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                                                                                                      
T Consensus       108 --------------------------------------------------------------------------------  107 (363)
T 3uog_A          108 --------------------------------------------------------------------------------  107 (363)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEcCceeecCCCcccccccccCCccccccce---ee-cccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhh
Q psy1413         231 IHCDRVAIEPGVPCRTCTYCKEGRYNLCRQI---FF-CATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVG  305 (408)
Q Consensus       231 i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~  305 (408)
                        +|+|...+..      .|..|. +.|.+.   .. +|. ..+|+|++|+.++++.++++|+++++++||.++ ...|+
T Consensus       108 --GDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  177 (363)
T 3uog_A          108 --GDRVISTFAP------GWLDGL-RPGTGRTPAYETLGG-AHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTA  177 (363)
T ss_dssp             --TCEEEECSST------TCCSSS-CCSCSSCCCCCCTTT-TSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHH
T ss_pred             --CCEEEEeccc------cccccc-cccccccccccccCc-CCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHH
Confidence              8999876543      567777 888742   22 332 357999999999999999999999999999887 66789


Q ss_pred             hhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413         306 VHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       306 ~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      |+++ +...+++++++||+|+|++|++++|+|+.+|++ |+++++++++++.++++|+++++|..+    +++.+.++++
T Consensus       178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~----~~~~~~v~~~  252 (363)
T 3uog_A          178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAE-VIVTSSSREKLDRAFALGADHGINRLE----EDWVERVYAL  252 (363)
T ss_dssp             HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHTCSEEEETTT----SCHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEecCchhHHHHHHcCCCEEEcCCc----ccHHHHHHHH
Confidence            9998 678999999999999999999999999999996 999999999999999999999999544    6788899999


Q ss_pred             hcCCCCceEEEcccch
Q psy1413         385 LQGEQPDKTIDCSGIE  400 (408)
Q Consensus       385 ~~~~~~d~i~d~~g~~  400 (408)
                      ++++++|++|||+|+.
T Consensus       253 ~~g~g~D~vid~~g~~  268 (363)
T 3uog_A          253 TGDRGADHILEIAGGA  268 (363)
T ss_dssp             HTTCCEEEEEEETTSS
T ss_pred             hCCCCceEEEECCChH
Confidence            9888999999999943

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=99.93  E-value=5.4e-26  Score=224.23  Aligned_cols=235  Identities=23%  Similarity=0.293  Sum_probs=191.1

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEc------------cCccccc--ccccc-ccccCcceeEEEccCch
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLT------------HGQIGDF--RLSDP-MIVGHEASGIVSKVGAK  138 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g------------~G~vG~~--~i~~a-~~~G~~~~~vv~~~g~~  138 (408)
                      .+.+ +..++|.+.+.++++.+.++++++.++...-            .+..|..  ...++ ..+|+|+.|+|..+|+.
T Consensus        49 ~l~~-~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~  127 (447)
T 4a0s_A           49 SLRL-GEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIG  127 (447)
T ss_dssp             HCEE-EEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGGGGGCCSEEECCSCEEEEEEEECTT
T ss_pred             CceE-EeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCccccccCCCCcccccceeEEEEEECCC
Confidence            5677 6778898999999999999999987653210            0111111  12344 57899999999999976


Q ss_pred             HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHH
Q psy1413         139 VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFET  218 (408)
Q Consensus       139 ~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~  218 (408)
                      .+.++.                                                                          
T Consensus       128 V~~~~v--------------------------------------------------------------------------  133 (447)
T 4a0s_A          128 VRRWKP--------------------------------------------------------------------------  133 (447)
T ss_dssp             CCSCCT--------------------------------------------------------------------------
T ss_pred             CCCCCC--------------------------------------------------------------------------
Confidence            554554                                                                          


Q ss_pred             HHcCCCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccc
Q psy1413         219 AKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGAL  298 (408)
Q Consensus       219 ~~~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~  298 (408)
                                    +|+|...+...|+.|. |..+.++.|.+...+|....+|+|++|+.++++.++++|+++++++++.
T Consensus       134 --------------GDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aA~  198 (447)
T 4a0s_A          134 --------------GDHVIVHPAHVDEQEP-ATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAV  198 (447)
T ss_dssp             --------------TCEEEECSEECCTTSG-GGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGGGEEECCTTSCHHHHHT
T ss_pred             --------------CCEEEEecCcCcCccc-ccccccccccccccccccCCCCceeeeeecCHHHcEECCCCCCHHHHHH
Confidence                          9999998887787776 5568899999999999877789999999999999999999999999998


Q ss_pred             cc-hhhhhhhhh---hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCC
Q psy1413         299 LE-PLSVGVHAC---RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHS  373 (408)
Q Consensus       299 ~~-~~~~~~~~~---~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~  373 (408)
                      ++ ++.|+|+++   +...+++++++||+|+ |++|++++|+++.+|++ +++++++++|++.++++|++.++++.+...
T Consensus       199 l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~-vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~  277 (447)
T 4a0s_A          199 SPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGI-PVAVVSSAQKEAAVRALGCDLVINRAELGI  277 (447)
T ss_dssp             SHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHTTCCCEEEHHHHTC
T ss_pred             hHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCCEEEecccccc
Confidence            76 677889888   3478999999999999 99999999999999997 778889999999999999999998754110


Q ss_pred             --------------hHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         374 --------------LEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       374 --------------~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                                    .+.+.+.+++++ ++++|++|||+|+.
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~~  317 (447)
T 4a0s_A          278 TDDIADDPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGRV  317 (447)
T ss_dssp             CTTGGGCHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCHH
T ss_pred             cccccccccccchhhhHHHHHHHHHh-CCCceEEEECCCch
Confidence                          123467888888 78999999999985

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=99.93  E-value=2.4e-26  Score=227.16  Aligned_cols=230  Identities=17%  Similarity=0.170  Sum_probs=168.1

Q ss_pred             CCeeeecccchhhhhcCC------------CCC--CCCCCC-ccccCCccEEEEEeCCCCCCCCCCCEEEEccCc-----
Q psy1413           1 MHCVGICGSDVHYLTHGQ------------IGD--FRLSDP-MIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-----   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~------------~~~--~~~~~P-~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-----   60 (408)
                      |+++|||++|++......            .+.  ...++| .++|||++|+|+++|++|++|++||||++.+..     
T Consensus        77 V~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~  156 (456)
T 3krt_A           77 VMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELES  156 (456)
T ss_dssp             EEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCS
T ss_pred             EEEEEecchhhhhhhcCcccchhhhhhccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccc
Confidence            569999999998653110            010  012467 699999999999999999999999999975421     


Q ss_pred             ----------------------------ccccCCcceeccceeeecccccCCCCCCcceEEEEee--eee-cCCeEEEEc
Q psy1413          61 ----------------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHC--VGI-CGSDVHYLT  109 (408)
Q Consensus        61 ----------------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~--~~~-~g~~vlv~g  109 (408)
                                                  ...+...++..|+++++++++.++.++.+++.+....  ..+ .+++|+|+|
T Consensus       157 ~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~G  236 (456)
T 3krt_A          157 SDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWG  236 (456)
T ss_dssp             GGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETT
T ss_pred             cccccccccCccccccccCCCCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEEC
Confidence                                        1223334555666666644444444444444222111  222 478899999


Q ss_pred             c-CccccccccccccccCc-----------------------------------------------------------ce
Q psy1413         110 H-GQIGDFRLSDPMIVGHE-----------------------------------------------------------AS  129 (408)
Q Consensus       110 ~-G~vG~~~i~~a~~~G~~-----------------------------------------------------------~~  129 (408)
                      + |++|++++|+++.+|+.                                                           ++
T Consensus       237 asG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~D  316 (456)
T 3krt_A          237 ASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDID  316 (456)
T ss_dssp             TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCc
Confidence            6 99999999998876651                                                           23


Q ss_pred             eEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceee
Q psy1413         130 GIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITH  205 (408)
Q Consensus       130 ~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~  205 (408)
                      .+++++|...  +++++++++|+++.+|.... ...++...++++++++.|++..+ .++.++++++++|+++  +++++
T Consensus       317 vvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~--~~i~~  394 (456)
T 3krt_A          317 IVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIH--PTLSK  394 (456)
T ss_dssp             EEEECSCHHHHHHHHHHEEEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSC--CCEEE
T ss_pred             EEEEcCCchhHHHHHHHhhCCcEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCcc--cceeE
Confidence            3455555432  67999999999999997765 56788889999999999999877 7788999999999986  57999


Q ss_pred             eeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         206 NYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       206 ~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      +|||+|+++||+.+.+++. .+|+++..
T Consensus       395 ~~~l~~~~eA~~~l~~~~~-~GKvvv~~  421 (456)
T 3krt_A          395 VYSLEDTGQAAYDVHRNLH-QGKVGVLC  421 (456)
T ss_dssp             EEEGGGHHHHHHHHHTTCS-SSEEEEES
T ss_pred             EEcHHHHHHHHHHHHhCCC-CCcEEEEe
Confidence            9999999999999988765 45666554

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=99.92  E-value=2.4e-25  Score=210.77  Aligned_cols=129  Identities=20%  Similarity=0.226  Sum_probs=103.3

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccch-hhhhhhhh---hccCcCCCC-EEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLEP-LSVGVHAC---RRAGVTLGS-KVLITGA-GPIGLVTLLTARALGASR  343 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~-~~~~~~~~---~~~~~~~~~-~~lv~G~-G~~G~~~~~~~~~~Ga~~  343 (408)
                      +|+|++|+.++++.++++|+++++++|+.+++ ..|++.++   .+..+++++ ++||+|+ |++|++++|+++.+|++ 
T Consensus        98 ~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~-  176 (328)
T 1xa0_A           98 FGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYT-  176 (328)
T ss_dssp             CCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCC-
T ss_pred             CccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCE-
Confidence            58999999999999999999999999998874 44566554   456788886 9999998 99999999999999997 


Q ss_pred             EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      |+++++++++++.++++|+++++|+++    .+ .+.+++++ +.++|++|||+|+. .++.+
T Consensus       177 vi~~~~~~~~~~~~~~lGa~~~i~~~~----~~-~~~~~~~~-~~~~d~vid~~g~~-~~~~~  232 (328)
T 1xa0_A          177 VEASTGKAAEHDYLRVLGAKEVLARED----VM-AERIRPLD-KQRWAAAVDPVGGR-TLATV  232 (328)
T ss_dssp             EEEEESCTTCHHHHHHTTCSEEEECC--------------CC-SCCEEEEEECSTTT-THHHH
T ss_pred             EEEEECCHHHHHHHHHcCCcEEEecCC----cH-HHHHHHhc-CCcccEEEECCcHH-HHHHH
Confidence            999999999999999999999999865    33 34455554 45899999999985 44443

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=99.92  E-value=3.6e-27  Score=222.96  Aligned_cols=225  Identities=17%  Similarity=0.175  Sum_probs=172.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~   68 (408)
                      |+++|||++|++.+. |..+ ...++|.++|||++|+|+++|  +++|++||||++.+            ++...+...+
T Consensus        34 v~a~gi~~~D~~~~~-g~~~-~~~~~p~v~G~E~~G~V~~~G--v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~  109 (324)
T 3nx4_A           34 VHWSSLNYKDALAIT-GKGK-IIRHFPMIPGIDFAGTVHASE--DPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWL  109 (324)
T ss_dssp             EEEEEECHHHHHHHH-TCTT-CCCSSSBCCCSEEEEEEEEES--STTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGC
T ss_pred             EEEEeCCHHHHhhhc-CCCC-CCCCCCccccceeEEEEEEeC--CCCCCCCCEEEEcccccCCCCCCceeeEEecCHHHc
Confidence            579999999999985 4322 235789999999999999998  68999999998643            3445666778


Q ss_pred             eeccceeeecccccCCCCCCcceEEEE--eeeeec-C-CeEEEEcc-CccccccccccccccCc----------------
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLEM--HCVGIC-G-SDVHYLTH-GQIGDFRLSDPMIVGHE----------------  127 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~--~~~~~~-g-~~vlv~g~-G~vG~~~i~~a~~~G~~----------------  127 (408)
                      +..|+++++++++.++..+.+++.+..  ...++. + .+++|+|+ |++|++++|+++.+|++                
T Consensus       110 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~  189 (324)
T 3nx4_A          110 VALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS  189 (324)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             EECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            888999998666666655555543211  122222 2 24999996 99999999999887761                


Q ss_pred             ----------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC
Q psy1413         128 ----------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA  182 (408)
Q Consensus       128 ----------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~  182 (408)
                                            ++.+++++|...  +++++++++|+++.+|.... ..+++...++.|++++.|++...
T Consensus       190 lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~  269 (324)
T 3nx4_A          190 LGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVM  269 (324)
T ss_dssp             HTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTT
T ss_pred             cCCCEEEecCCHHHHHhhcCCCccEEEECCCcHHHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccc
Confidence                                  345667776542  68999999999999998765 46778888999999999986432


Q ss_pred             -------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         183 -------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       183 -------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                             +.++++++++++|++++  + +++|+|+|+++||+.+.+++. .+|++++.
T Consensus       270 ~~~~~~~~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~-~gkvvv~~  323 (324)
T 3nx4_A          270 TPPARRAEAWARLVKDLPESFYAQ--A-ATEITLADAPKFADAIINNQV-QGRTLVKI  323 (324)
T ss_dssp             CCHHHHHHHHHHHHHHSCHHHHHH--H-EEEEEGGGHHHHHHHHHTTCC-CSEEEEEC
T ss_pred             cChHHHHHHHHHHHHHHHcCCCCC--C-ceeEeHHHHHHHHHHHHhCCC-CceEEEec
Confidence                   34788889999998864  4 999999999999999998764 47777765

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=99.92  E-value=2.1e-25  Score=211.42  Aligned_cols=129  Identities=22%  Similarity=0.263  Sum_probs=105.3

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccch-hhhhhhhh---hccCcCCCC-EEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLEP-LSVGVHAC---RRAGVTLGS-KVLITGA-GPIGLVTLLTARALGASR  343 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~-~~~~~~~~---~~~~~~~~~-~~lv~G~-G~~G~~~~~~~~~~Ga~~  343 (408)
                      +|+|++|+.++++.++++|+++++++++.+++ ..|++.++   .+..+++++ ++||+|+ |++|++++|+++.+|++ 
T Consensus        99 ~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~-  177 (330)
T 1tt7_A           99 DGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYD-  177 (330)
T ss_dssp             CCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCC-
T ss_pred             CccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCE-
Confidence            58999999999999999999999999998874 45566554   456788886 9999998 99999999999999997 


Q ss_pred             EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      |+++++++++++.++++|++.++|+++    .+ .+.+++++ +.++|++|||+|++ +++.+
T Consensus       178 vi~~~~~~~~~~~~~~lGa~~v~~~~~----~~-~~~~~~~~-~~~~d~vid~~g~~-~~~~~  233 (330)
T 1tt7_A          178 VVASTGNREAADYLKQLGASEVISRED----VY-DGTLKALS-KQQWQGAVDPVGGK-QLASL  233 (330)
T ss_dssp             EEEEESSSSTHHHHHHHTCSEEEEHHH----HC-SSCCCSSC-CCCEEEEEESCCTH-HHHHH
T ss_pred             EEEEeCCHHHHHHHHHcCCcEEEECCC----ch-HHHHHHhh-cCCccEEEECCcHH-HHHHH
Confidence            999999999999999999999998753    21 12233333 45899999999984 55444

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=99.92  E-value=2.7e-26  Score=220.51  Aligned_cols=224  Identities=19%  Similarity=0.175  Sum_probs=164.9

Q ss_pred             CCeeeecccchhhhhcC--CCCCCCCCC---CccccCCccEEEEEeCCCCCCCCCCCEEEEccCc---------------
Q psy1413           1 MHCVGICGSDVHYLTHG--QIGDFRLSD---PMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF---------------   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g--~~~~~~~~~---P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~---------------   60 (408)
                      |+++|||++|++.+. |  .++  ..++   |.++|||++|+|++  ++ ++|++||||++.+..               
T Consensus        33 v~a~gi~~~D~~~~~-g~~~~~--~~~~~~~p~v~G~E~~G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~  106 (366)
T 2cdc_A           33 TIYNGICGADREIVN-GKLTLS--TLPKGKDFLVLGHEAIGVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDF  106 (366)
T ss_dssp             EEEEEECHHHHHHHT-TCC---------CCSCEECCSEEEEEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGG
T ss_pred             EEEEeeccccHHHHc-CCCCCC--CCCcCCCCCcCCcceEEEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCccc
Confidence            579999999999985 3  211  2356   99999999999999  77 899999999975421               


Q ss_pred             ---------------------ccccCCcceeccceeeecccccCCCCCCcceEEEE--e--eeee---c-------CCeE
Q psy1413          61 ---------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEM--H--CVGI---C-------GSDV  105 (408)
Q Consensus        61 ---------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~--~--~~~~---~-------g~~v  105 (408)
                                           ...+...++..|++++ ++ ++++.++.+++.+..  .  ...+   .       ++++
T Consensus       107 C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~-Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~V  184 (366)
T 2cdc_A          107 CETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DI-GILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKV  184 (366)
T ss_dssp             CSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TT-GGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEE
T ss_pred             CCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hh-hhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEE
Confidence                                 1222334455566666 33 345444444442222  1  2334   3       8899


Q ss_pred             EEEccCccccccccccccccCc----------------------------------------ceeEEEccCch----HHH
Q psy1413         106 HYLTHGQIGDFRLSDPMIVGHE----------------------------------------ASGIVSKVGAK----VKH  141 (408)
Q Consensus       106 lv~g~G~vG~~~i~~a~~~G~~----------------------------------------~~~vv~~~g~~----~~~  141 (408)
                      +|+|+|++|++++|+++.+|+.                                        ++.+++++|..    ..+
T Consensus       185 lV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  264 (366)
T 2cdc_A          185 LVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADVNILGNV  264 (366)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCCTHHHHHH
T ss_pred             EEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCChHHHHHHH
Confidence            9999999999888877655431                                        34566777753    457


Q ss_pred             HhhccCCcEEEEEccCCCC-cccCHHH---HHhcCcEEEEeecCC-CcHHHHHHHHHcCCCC----CCCceeeeeccchH
Q psy1413         142 LKATRPGGCLVIVGAGSQD-VKIPLVL---TMTKEIDIRGVFRYA-NDYPIALAMVASGKVD----VKKLITHNYLLEDT  212 (408)
Q Consensus       142 ~~~l~~gG~iv~~G~~~~~-~~~~~~~---~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~----~~~~i~~~~~l~~~  212 (408)
                      +++++++|+++.+|..... ..++...   ++.|++++.|++... ++++++++++++|+++    ++++++++|+|+|+
T Consensus       265 ~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~  344 (366)
T 2cdc_A          265 IPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDE  344 (366)
T ss_dssp             GGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEECCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCH
T ss_pred             HHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEEecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHH
Confidence            8999999999999987654 6788777   899999999998776 7899999999999988    88999999999999


Q ss_pred             HHHHHHH-HcCCCCceEEEEEc
Q psy1413         213 LHAFETA-KTGAGNAIKVMIHC  233 (408)
Q Consensus       213 ~~a~~~~-~~~~~~~~kvvi~~  233 (408)
                      ++||+.+ .++ ...+|+++++
T Consensus       345 ~~A~~~l~~~~-~~~gKvvi~~  365 (366)
T 2cdc_A          345 KELLKVLREKE-HGEIKIRILW  365 (366)
T ss_dssp             HHHHHHHHCCC-TTCCEEEEEC
T ss_pred             HHHHHHHhhhc-CCceEEEEec
Confidence            9999994 333 4578888875

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=99.92  E-value=2.5e-24  Score=204.49  Aligned_cols=126  Identities=21%  Similarity=0.167  Sum_probs=110.2

Q ss_pred             ceeEEeeccceeeeCCCCCCcccc--cccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413         273 LSRYYRHAADFCHKLPDHVSLEEG--ALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       273 ~~~~~~~~~~~~~~~p~~~~~~~a--a~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      |++|+.++++.++++|++++..++  +.++ ++.|+++++ +...+++++++||+|+ |++|++++|+++.+|++ |+++
T Consensus       102 ~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~-Vi~~  180 (336)
T 4b7c_A          102 VQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCR-VVGI  180 (336)
T ss_dssp             SBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred             ceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEE
Confidence            678889999999999999976664  4444 789999999 7889999999999999 99999999999999995 9999


Q ss_pred             ecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         348 DILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       348 ~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      ++++++++.+ +++|++.++|+++    +++.+.+++++ ++++|++|||+|+. .++.
T Consensus       181 ~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~-~~~~d~vi~~~g~~-~~~~  233 (336)
T 4b7c_A          181 AGGAEKCRFLVEELGFDGAIDYKN----EDLAAGLKREC-PKGIDVFFDNVGGE-ILDT  233 (336)
T ss_dssp             ESSHHHHHHHHHTTCCSEEEETTT----SCHHHHHHHHC-TTCEEEEEESSCHH-HHHH
T ss_pred             eCCHHHHHHHHHHcCCCEEEECCC----HHHHHHHHHhc-CCCceEEEECCCcc-hHHH
Confidence            9999999999 8999999999887    77888888888 56899999999974 4443

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=99.91  E-value=2.2e-24  Score=206.64  Aligned_cols=127  Identities=20%  Similarity=0.191  Sum_probs=108.5

Q ss_pred             ceeEEeeccceeeeCCCCC-----Ccccccccchhhhhhhhh-hccCcCCC--CEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413         273 LSRYYRHAADFCHKLPDHV-----SLEEGALLEPLSVGVHAC-RRAGVTLG--SKVLITGA-GPIGLVTLLTARALGASR  343 (408)
Q Consensus       273 ~~~~~~~~~~~~~~~p~~~-----~~~~aa~~~~~~~~~~~~-~~~~~~~~--~~~lv~G~-G~~G~~~~~~~~~~Ga~~  343 (408)
                      |++|++++++.++++|+++     +.+.+++..++.|+|+++ +...++++  +++||+|+ |++|+.++|+++.+|+++
T Consensus       109 ~aey~~v~~~~~~~iP~~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~  188 (357)
T 2zb4_A          109 WQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSR  188 (357)
T ss_dssp             SBSEEEEEGGGCEECCGGGGTTCGGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSE
T ss_pred             cEEEEEEchHHceecCcccccCchhHHHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCe
Confidence            6788889999999999998     555444445888999999 77889999  99999999 999999999999999955


Q ss_pred             EEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         344 VVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       344 vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      |+++++++++++.+++ +|++.++|+++    +++.+.+++.+.+ ++|++|||+|+ ..++.
T Consensus       189 Vi~~~~~~~~~~~~~~~~g~~~~~d~~~----~~~~~~~~~~~~~-~~d~vi~~~G~-~~~~~  245 (357)
T 2zb4_A          189 VVGICGTHEKCILLTSELGFDAAINYKK----DNVAEQLRESCPA-GVDVYFDNVGG-NISDT  245 (357)
T ss_dssp             EEEEESCHHHHHHHHHTSCCSEEEETTT----SCHHHHHHHHCTT-CEEEEEESCCH-HHHHH
T ss_pred             EEEEeCCHHHHHHHHHHcCCceEEecCc----hHHHHHHHHhcCC-CCCEEEECCCH-HHHHH
Confidence            9999999999998876 99999999876    6777888888766 89999999996 33433

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.91  E-value=2.1e-24  Score=247.69  Aligned_cols=330  Identities=14%  Similarity=0.111  Sum_probs=228.0

Q ss_pred             CCeeeecccchhhhhcCCCCCC-----CCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDF-----RLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPIL   69 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~-----~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~   69 (408)
                      |+++|||++|+++.. |.++..     ...+|.++|||++|+|.          +||||....      ++...+...++
T Consensus      1566 V~aaglN~~Dv~~~~-G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV~g~~~~G~~Aeyv~vp~~~v~ 1634 (2512)
T 2vz8_A         1566 VYYTSLNFRDVMLAT-GKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRVMGMVPAEGLATSVLLLQHATW 1634 (2512)
T ss_dssp             EEEEECCHHHHHHHH-TSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCEEEECSSCCSBSEEECCGGGEE
T ss_pred             EEecccCHHHHHHHh-CCCccccccccccccCCceEEEEEEEEc----------cCCEEEEeecCCceeeEEEcccceEE
Confidence            468999999999885 432211     12346789999999873          799997532      45567778889


Q ss_pred             eccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc--------------------
Q psy1413          70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE--------------------  127 (408)
Q Consensus        70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~--------------------  127 (408)
                      ..|+++++++++.+|..+.+++.+......+ .|++|+|+| +|++|++++|+|+.+|++                    
T Consensus      1635 ~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~ 1714 (2512)
T 2vz8_A         1635 EVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQ 1714 (2512)
T ss_dssp             ECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT
T ss_pred             EeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCC
Confidence            9999999977787776666665433222233 588999987 699999999998877752                    


Q ss_pred             --------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-cccCHHHHHhcCcEEEEe
Q psy1413         128 --------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-VKIPLVLTMTKEIDIRGV  178 (408)
Q Consensus       128 --------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~~~~~~~~~~~~~~l~g~  178 (408)
                                                ++.++++++...  .++++++++|+++.+|..... .......++.+++++.++
T Consensus      1715 lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~ 1794 (2512)
T 2vz8_A         1715 LDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGI 1794 (2512)
T ss_dssp             CCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEEC
T ss_pred             CCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEe
Confidence                                      233444444221  578999999999999954321 111123567889999997


Q ss_pred             ecC------CCcHHHHHHHHH----cCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceeecCCCcccccc
Q psy1413         179 FRY------ANDYPIALAMVA----SGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCT  248 (408)
Q Consensus       179 ~~~------~~~~~~~~~l~~----~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~~~~~~~~~~~  248 (408)
                      ...      ...++++++++.    ++++  +++++++||++|+++||+.+.+++. .+|++++.+.-..          
T Consensus      1795 ~l~~~~~~~~~~~~~~l~~l~~~~~~g~l--~p~i~~~f~l~ei~eA~~~l~~g~~-~GKvVi~~~~~~~---------- 1861 (2512)
T 2vz8_A         1795 LLDSLFEEGGATWQEVSELLKAGIQEGVV--QPLKCTVFPRTKVEAAFRYMAQGKH-IGKVVIQVREEEQ---------- 1861 (2512)
T ss_dssp             CGGGTTSSCCHHHHHHHHHHHHHHTTTCS--CCCCEEEEESSTHHHHHHHHHTTCC-SSEEEEECSCCCC----------
T ss_pred             eHHHHhhhCHHHHHHHHHHHHHHHHcCCc--CCCcceEecHHHHHHHHHhhhccCc-cceEEEECCCccc----------
Confidence            542      135667766665    4544  4678999999999999999998764 5688877542100          


Q ss_pred             cccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCcCCCCEEEEEec-ch
Q psy1413         249 YCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGA-GP  327 (408)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~-G~  327 (408)
                                                       ..+...+...+.             .......++++++|||+|+ ||
T Consensus      1862 ---------------------------------~~~~~~~~~~~~-------------~~~~~~~~~~~k~~lITGgs~G 1895 (2512)
T 2vz8_A         1862 ---------------------------------GPAPRGLPPIAL-------------TGLSKTFCPPHKSYVITGGLGG 1895 (2512)
T ss_dssp             ---------------------------------SSCCCCCCCCCE-------------EEECCCCCCTTCEEEEESTTSH
T ss_pred             ---------------------------------cccccccccccc-------------ccccccccCCCCEEEEECCCCC
Confidence                                             000000000000             0011234689999999999 99


Q ss_pred             hHHHHHHHHHHhCCCeEEEEecChhhH-------HHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         328 IGLVTLLTARALGASRVVITDILEHKL-------KTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       328 ~G~~~~~~~~~~Ga~~vv~~~~~~~~~-------~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +|+.+++++...|+++|++++|+..+.       +.+++.|....+...|..+.+++++.+.++....++|.+|+++|..
T Consensus      1896 IG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~lVnnAgv~ 1975 (2512)
T 2vz8_A         1896 FGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGGVFNLAMVL 1975 (2512)
T ss_dssp             HHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEEEEECCCC-
T ss_pred             HHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcEEEECCCcC
Confidence            999999999999999899999885432       2234457766666677777888888887765445799999999864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=99.88  E-value=6e-24  Score=198.81  Aligned_cols=215  Identities=20%  Similarity=0.188  Sum_probs=161.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      |+++|||++|++.+. |.++ ...++|.++|||++|+|+           ||||+..+      ++...+...++..|++
T Consensus        32 v~a~gi~~~D~~~~~-g~~~-~~~~~p~i~G~e~~G~V~-----------GdrV~~~~~~G~~aey~~v~~~~~~~iP~~   98 (302)
T 1iz0_A           32 VEAVGLNFADHLMRL-GAYL-TRLHPPFIPGMEVVGVVE-----------GRRYAALVPQGGLAERVAVPKGALLPLPEG   98 (302)
T ss_dssp             EEEEEECHHHHHHHH-TCSS-SCCCSSBCCCCEEEEEET-----------TEEEEEECSSCCSBSEEEEEGGGCEECCTT
T ss_pred             EEEEecCHHHHHHhC-CCCC-CCCCCCCcccceEEEEEE-----------CcEEEEecCCcceeeEEEEcHHHcEeCCCC
Confidence            479999999999985 3322 123679999999999998           99998653      4556677788899999


Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEcc-CccccccccccccccCc--------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTH-GQIGDFRLSDPMIVGHE--------------------------  127 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~-G~vG~~~i~~a~~~G~~--------------------------  127 (408)
                      +++++.+.++.++.+++.+.....--.+++++|+|+ |++|++++|+++.+|++                          
T Consensus        99 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~  178 (302)
T 1iz0_A           99 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYA  178 (302)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGG
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECC
Confidence            999666778877766664332112235889999996 99999999988876651                          


Q ss_pred             -----------ceeEEEccCch--HHHHhhccCCcEEEEEccCCCC-cccCHHHHHhcCcEEEEeecC----C-CcHHHH
Q psy1413         128 -----------ASGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQD-VKIPLVLTMTKEIDIRGVFRY----A-NDYPIA  188 (408)
Q Consensus       128 -----------~~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~~-~~~~~~~~~~~~~~l~g~~~~----~-~~~~~~  188 (408)
                                 ++.+++ +|..  .+++++++++|+++.+|..... ..++...++.|++++.|++..    . ++++++
T Consensus       179 ~~~~~~~~~~~~d~vid-~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  257 (302)
T 1iz0_A          179 EVPERAKAWGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEA  257 (302)
T ss_dssp             GHHHHHHHTTSEEEEEE-CSCTTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHH
T ss_pred             cchhHHHHhcCceEEEE-CCHHHHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHH
Confidence                       344556 6543  2678999999999999976543 357777889999999998742    3 678999


Q ss_pred             HH---HHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         189 LA---MVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       189 ~~---l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      ++   ++++|+++  ++++++|||+|+++||+.+.+++. .+|++++
T Consensus       258 ~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~-~gKvvv~  301 (302)
T 1iz0_A          258 LGFLLPRLGRELR--PVVGPVFPFAEAEAAFRALLDRGH-TGKVVVR  301 (302)
T ss_dssp             HHHHGGGBTTTBC--CCEEEEEEGGGHHHHHHHTTCTTC-CBEEEEE
T ss_pred             HhhhHHHHcCCcc--cccceEEcHHHHHHHHHHHHcCCC-CceEEEe
Confidence            99   99999885  679999999999999999987653 5687775

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=99.87  E-value=1.1e-22  Score=191.85  Aligned_cols=209  Identities=21%  Similarity=0.273  Sum_probs=165.4

Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEcc-Cccc-cccccccccccCcceeEEEccCchHHHHhhccCCc
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTH-GQIG-DFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGG  149 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~-G~vG-~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG  149 (408)
                      |+.+.+ ++.+.|.+.+.++++.+.++++++.++.+... +... .....++..+|+|+.|+|..+|+..+.++.     
T Consensus        18 ~~~l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~-----   91 (321)
T 3tqh_A           18 PKVLKL-VDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNI-----   91 (321)
T ss_dssp             GGGEEE-EEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTTCCSCCT-----
T ss_pred             cceeEE-EecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCCCCCCCC-----
Confidence            455777 66788888899999999999999888765421 1110 123456778999999999999976544444     


Q ss_pred             EEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEE
Q psy1413         150 CLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV  229 (408)
Q Consensus       150 ~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kv  229 (408)
                                                                                                      
T Consensus        92 --------------------------------------------------------------------------------   91 (321)
T 3tqh_A           92 --------------------------------------------------------------------------------   91 (321)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhh
Q psy1413         230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHA  308 (408)
Q Consensus       230 vi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~  308 (408)
                         +|+|...+.                        .+..+|+|++|+.++++.++++|+++++++++.++ ...|+|++
T Consensus        92 ---GdrV~~~~~------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a  144 (321)
T 3tqh_A           92 ---GDKVMGIAG------------------------FPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQA  144 (321)
T ss_dssp             ---TCEEEEECS------------------------TTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHH
T ss_pred             ---CCEEEEccC------------------------CCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHH
Confidence               788865332                        12357999999999999999999999999999887 45689999


Q ss_pred             hhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHH-HHHHHHHHhc
Q psy1413         309 CRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEE-ISTHIIELLQ  386 (408)
Q Consensus       309 ~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~-~~~~~~~~~~  386 (408)
                      ++...+++++++||+|+ |++|++++|+|+.+|++ |++++ ++++++.++++|+++++|+++    ++ +.+.+     
T Consensus       145 l~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~-vi~~~-~~~~~~~~~~lGa~~~i~~~~----~~~~~~~~-----  213 (321)
T 3tqh_A          145 LNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTT-VITTA-SKRNHAFLKALGAEQCINYHE----EDFLLAIS-----  213 (321)
T ss_dssp             HHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEE-CHHHHHHHHHHTCSEEEETTT----SCHHHHCC-----
T ss_pred             HHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCE-EEEEe-ccchHHHHHHcCCCEEEeCCC----cchhhhhc-----
Confidence            98899999999999986 99999999999999996 77776 556688999999999999877    33 33332     


Q ss_pred             CCCCceEEEcccchhhhhhc
Q psy1413         387 GEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       387 ~~~~d~i~d~~g~~~~~~~~  406 (408)
                       +++|++|||+|++.. +.+
T Consensus       214 -~g~D~v~d~~g~~~~-~~~  231 (321)
T 3tqh_A          214 -TPVDAVIDLVGGDVG-IQS  231 (321)
T ss_dssp             -SCEEEEEESSCHHHH-HHH
T ss_pred             -cCCCEEEECCCcHHH-HHH
Confidence             589999999998766 443

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=99.85  E-value=3.9e-22  Score=190.02  Aligned_cols=228  Identities=14%  Similarity=0.065  Sum_probs=162.1

Q ss_pred             CCeeeecccchhhhhcCCCCCC--CCCCCccccCCccEEEEE--eCCCCCCCCCCCEEEEc---cCcccccCCc--ceec
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDF--RLSDPMIVGHEASGIVSK--VGAKVKHLKVDNQTRFV---PEFRNVCLSP--ILRR   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~--~~~~P~i~GhE~~G~Vv~--vG~~v~~~~vGdrV~~~---~~~~~~~~~~--~~~~   71 (408)
                      |+++|+|+.|. .+.+.+ ...  ...+|.++|||++|++++  +|++|++|++||||+..   .++.......  ++..
T Consensus        45 v~a~g~~~~~~-~~~g~~-~~~~~~~~~p~v~G~e~~G~~~~GvV~~~v~~~~vGdrV~~~g~~aey~~v~~~~~~~~~i  122 (345)
T 2j3h_A           45 NLYLSCDPYMR-IRMGKP-DPSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI  122 (345)
T ss_dssp             ECEEECCTTHH-HHHBC----------CCCCTTSBCEEEEEEEEEEECSTTCCTTCEEEEEEESBSEEEECCCTTTCEEE
T ss_pred             EEEecCCHHHH-hhcccC-CCCccccCCCcCCCCeeecceEEEEEecCCCCCCCCCEEEeecCceeEEEecccccceeec
Confidence            46899776664 443221 111  124689999999999999  99999999999999853   4555555544  6777


Q ss_pred             cc---eeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccC--------------------
Q psy1413          72 RF---SLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGH--------------------  126 (408)
Q Consensus        72 p~---~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~--------------------  126 (408)
                      |+   .+++ +++.++.++.+++.+......+ .+++++|+|+ |++|++++++++..|+                    
T Consensus       123 p~~~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g  201 (345)
T 2j3h_A          123 QHTDVPLSY-YTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFG  201 (345)
T ss_dssp             CCCSSCTTG-GGTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSC
T ss_pred             CCCCCCHHH-HHHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC
Confidence            75   3444 4556666655555332222233 4788999995 9999998887765554                    


Q ss_pred             -----------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC------CcccCHHHHHhcCcEE
Q psy1413         127 -----------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ------DVKIPLVLTMTKEIDI  175 (408)
Q Consensus       127 -----------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~------~~~~~~~~~~~~~~~l  175 (408)
                                             .++.+++++|...  +++++++++|+++.+|....      ...++...++++++++
T Consensus       202 ~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i  281 (345)
T 2j3h_A          202 FDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRI  281 (345)
T ss_dssp             CSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEE
T ss_pred             CceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceee
Confidence                                   1345566666432  67899999999999997542      3456777899999999


Q ss_pred             EEeecCC--C----cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         176 RGVFRYA--N----DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       176 ~g~~~~~--~----~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      .|++...  .    .++++++++++|+++  ++++++|+|+|+++||+.+.+++. .+|+++..+
T Consensus       282 ~g~~~~~~~~~~~~~~~~~~~l~~~g~i~--~~~~~~~~l~~~~~A~~~~~~~~~-~gKvvv~~~  343 (345)
T 2j3h_A          282 QGFVVSDFYDKYSKFLEFVLPHIREGKIT--YVEDVADGLEKAPEALVGLFHGKN-VGKQVVVVA  343 (345)
T ss_dssp             EECCGGGGGGGHHHHHHHHHHHHHTTSSC--CCEEEEESGGGSHHHHHHHHTTCC-SSEEEEESS
T ss_pred             ceeeehhhhhhHHHHHHHHHHHHHCCCCc--CcccccCCHHHHHHHHHHHHcCCC-ceEEEEEeC
Confidence            9987543  2    388999999999987  467778999999999999998764 567777653

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=99.85  E-value=1e-21  Score=186.16  Aligned_cols=220  Identities=16%  Similarity=0.087  Sum_probs=162.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc---cCcccccCCcceeccce---
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV---PEFRNVCLSPILRRRFS---   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~---~~~~~~~~~~~~~~p~~---   74 (408)
                      |+++|||++|.. +.      .+.++|.++|||++|+|++.  +|++|++||||++.   .++...+...++..|++   
T Consensus        45 v~a~gi~~~~~~-~~------~~~~~p~~~g~e~~G~Vv~~--~v~~~~vGdrV~~~g~~aey~~v~~~~~~~iP~~~~~  115 (333)
T 1v3u_A           45 ALFLSVDPYMRI-AS------KRLKEGAVMMGQQVARVVES--KNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPD  115 (333)
T ss_dssp             EEEEECCTHHHH-HT------TTCCTTSBCCCCEEEEEEEE--SCTTSCTTCEEEECCCSBSEEEESSTTEEECC--CCT
T ss_pred             EEEeccCHHHcc-cc------CcCCCCcccccceEEEEEec--CCCCCCCCCEEEecCceEEEEEechHHeEEcCccccc
Confidence            468999999873 21      12357889999999999994  68899999999864   45667777888999997   


Q ss_pred             -eeecc-cccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccC------------------------
Q psy1413          75 -LRFRE-QKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGH------------------------  126 (408)
Q Consensus        75 -~~~~~-~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~------------------------  126 (408)
                       +++++ .+.++.++.+++.+......+ .+++++|+|+ |++|++++++++..|+                        
T Consensus       116 ~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~  195 (333)
T 1v3u_A          116 KLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAF  195 (333)
T ss_dssp             TSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEE
T ss_pred             CCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEE
Confidence             77744 367777766665433222233 4788999995 9999988887776554                        


Q ss_pred             ------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC------Cc-ccCHHHHHhcCcEEEEee
Q psy1413         127 ------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ------DV-KIPLVLTMTKEIDIRGVF  179 (408)
Q Consensus       127 ------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~------~~-~~~~~~~~~~~~~l~g~~  179 (408)
                                        .++.+++++|...  +++++++++|+++.+|....      +. .++...+++|++++.|++
T Consensus       196 d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~  275 (333)
T 1v3u_A          196 NYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFI  275 (333)
T ss_dssp             ETTSCSCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECC
T ss_pred             ecCCHHHHHHHHHHHhCCCCeEEEECCChHHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEe
Confidence                              1345566666432  67899999999999997643      21 236778999999999987


Q ss_pred             cCC-------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         180 RYA-------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       180 ~~~-------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      ...       ++++++++++++|++++..+++  ++|+|+++||+.+.+++. .+|++++
T Consensus       276 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~--~~l~~~~~A~~~~~~~~~-~gKvvl~  332 (333)
T 1v3u_A          276 VYRWQGDVREKALRDLMKWVLEGKIQYHEHVT--KGFENMPAAFIEMLNGAN-LGKAVVT  332 (333)
T ss_dssp             GGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEE--ECGGGHHHHHHHHHTTCC-SBEEEEE
T ss_pred             hhhcchHHHHHHHHHHHHHHHCCCccCccccc--cCHHHHHHHHHHHHcCCC-CceEEEe
Confidence            532       3577899999999998876554  699999999999988754 5777765

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=99.85  E-value=2e-21  Score=185.35  Aligned_cols=207  Identities=23%  Similarity=0.286  Sum_probs=163.2

Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL  151 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i  151 (408)
                      |+.+.+ +..++|.+.+.++++.+.++++++.++.+.. |... .....+..+|.|+.|+|..+|+..+.++.       
T Consensus        15 ~~~l~~-~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~~~-~~~~~p~v~G~e~~G~V~~vG~~v~~~~~-------   84 (349)
T 4a27_A           15 LNKLRL-FRKAMPEPQDGELKIRVKACGLNFIDLMVRQ-GNID-NPPKTPLVPGFECSGIVEALGDSVKGYEI-------   84 (349)
T ss_dssp             GGGEEE-EEECCCCCCTTEEEEEEEEEEECHHHHHHHH-TCSS-SCCCSSBCCCSEEEEEEEEECTTCCSCCT-------
T ss_pred             cceeEE-EecCCCCCCCCEEEEEEEEEecCHHHHHHhC-CCcC-CCCCCCccccceeEEEEEEeCCCCCCCCC-------
Confidence            346777 6678888889999999999999988776542 1111 12456778999999999999976444444       


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                                                                                                      
T Consensus        85 --------------------------------------------------------------------------------   84 (349)
T 4a27_A           85 --------------------------------------------------------------------------------   84 (349)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-
Q psy1413         232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-  309 (408)
Q Consensus       232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-  309 (408)
                       +|+|...                            ..+|+|++|+.++++.++++|+++++++++.++ +..|+|+++ 
T Consensus        85 -GdrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~  135 (349)
T 4a27_A           85 -GDRVMAF----------------------------VNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLF  135 (349)
T ss_dssp             -TCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHH
T ss_pred             -CCEEEEe----------------------------cCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence             7888531                            146999999999999999999999999999887 678889888 


Q ss_pred             hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         310 RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       310 ~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      +...+++++++||+|+ |++|++++|+++.+|+.+|+.++ ++++.+.++ +|++++++ ++    +++.+.+++++ ++
T Consensus       136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~----~~~~~~~~~~~-~~  207 (349)
T 4a27_A          136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RN----ADYVQEVKRIS-AE  207 (349)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TT----SCHHHHHHHHC-TT
T ss_pred             HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CC----ccHHHHHHHhc-CC
Confidence            6688999999999999 99999999999999776688776 667888888 99999999 55    67778888887 56


Q ss_pred             CCceEEEcccchhhhhhc
Q psy1413         389 QPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       389 ~~d~i~d~~g~~~~~~~~  406 (408)
                      ++|++|||+|++.. +.+
T Consensus       208 g~Dvv~d~~g~~~~-~~~  224 (349)
T 4a27_A          208 GVDIVLDCLCGDNT-GKG  224 (349)
T ss_dssp             CEEEEEEECC--------
T ss_pred             CceEEEECCCchhH-HHH
Confidence            99999999998765 444

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=99.84  E-value=3.4e-21  Score=184.30  Aligned_cols=206  Identities=18%  Similarity=0.267  Sum_probs=157.8

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV  154 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~  154 (408)
                      +.+ +..+.|.+.+.++++.+.++++++.++.+.. |... ....++..+|.|+.|+|..+|+..+.++.          
T Consensus        42 l~~-~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~-G~~~-~~~~~P~v~G~E~~G~V~~vG~~v~~~~v----------  108 (357)
T 1zsy_A           42 VEL-KNLELAAVRGSDVRVKMLAAPINPSDINMIQ-GNYG-LLPELPAVGGNEGVAQVVAVGSNVTGLKP----------  108 (357)
T ss_dssp             EEE-EEECCCCCCTTEEEEEEEEEECCHHHHHHHH-TCSS-CCCCSSEECCSCCEEEEEEECTTCCSCCT----------
T ss_pred             EEE-eeccCCCCCCCEEEEEEEECCCCHHHhhHhc-CCCC-CCCCCCccccceEEEEEEEeCCCCCCCCC----------
Confidence            556 5567788888999999999999988776542 2111 11235678899999999999976444444          


Q ss_pred             ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                                                                                                    +|
T Consensus       109 ------------------------------------------------------------------------------Gd  110 (357)
T 1zsy_A          109 ------------------------------------------------------------------------------GD  110 (357)
T ss_dssp             ------------------------------------------------------------------------------TC
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          88


Q ss_pred             ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hcc
Q psy1413         235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRA  312 (408)
Q Consensus       235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~  312 (408)
                      +|...+                           ..+|+|++|+.++++.++++|+++++++|+.++ ...|+|+++ +..
T Consensus       111 rV~~~~---------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~  163 (357)
T 1zsy_A          111 WVIPAN---------------------------AGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFE  163 (357)
T ss_dssp             EEEESS---------------------------SCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSS
T ss_pred             EEEEcC---------------------------CCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHh
Confidence            886532                           136999999999999999999999999999887 567888888 457


Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh---hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE---HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~---~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      .+++++++||+|+ |++|++++|+|+.+|++.|+++++++   ++++.++++|+++++|+++    .+ .+.+.+++.+.
T Consensus       164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~----~~-~~~~~~~~~~~  238 (357)
T 1zsy_A          164 QLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE----LR-RPEMKNFFKDM  238 (357)
T ss_dssp             CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHH----HH-SGGGGGTTSSS
T ss_pred             ccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCc----ch-HHHHHHHHhCC
Confidence            8999999999998 99999999999999998555544433   3567889999999998743    11 23455555443


Q ss_pred             -CCceEEEcccchhhh
Q psy1413         389 -QPDKTIDCSGIESTI  403 (408)
Q Consensus       389 -~~d~i~d~~g~~~~~  403 (408)
                       ++|++|||+|++...
T Consensus       239 ~~~Dvvid~~g~~~~~  254 (357)
T 1zsy_A          239 PQPRLALNCVGGKSST  254 (357)
T ss_dssp             CCCSEEEESSCHHHHH
T ss_pred             CCceEEEECCCcHHHH
Confidence             699999999987654

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=99.83  E-value=1.9e-21  Score=183.72  Aligned_cols=210  Identities=19%  Similarity=0.190  Sum_probs=161.0

Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL  151 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i  151 (408)
                      |+.+.+ +..+.|.+.+.++++.+.++++++.++.+.. |.. .....++..+|+|+.|+|..+|.  +.++.       
T Consensus        12 ~~~l~~-~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~-g~~-~~~~~~p~v~G~E~~G~V~~~Gv--~~~~v-------   79 (324)
T 3nx4_A           12 KTLASV-QHLEESQLPAGDVTVDVHWSSLNYKDALAIT-GKG-KIIRHFPMIPGIDFAGTVHASED--PRFHA-------   79 (324)
T ss_dssp             SEEEEE-EECCGGGSCCCSEEEEEEEEEECHHHHHHHH-TCT-TCCCSSSBCCCSEEEEEEEEESS--TTCCT-------
T ss_pred             CceeeE-eecCCCCCCCCEEEEEEEEEeCCHHHHhhhc-CCC-CCCCCCCccccceeEEEEEEeCC--CCCCC-------
Confidence            445777 6778888889999999999999988776542 111 11245677899999999999884  23443       


Q ss_pred             EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                                                                                                      
T Consensus        80 --------------------------------------------------------------------------------   79 (324)
T 3nx4_A           80 --------------------------------------------------------------------------------   79 (324)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-
Q psy1413         232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-  309 (408)
Q Consensus       232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-  309 (408)
                       +|+|...+         |.            .+. ..+|+|++|+.++++.++++|+++++++++.++ ...|+++++ 
T Consensus        80 -GdrV~~~~---------~~------------~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~  136 (324)
T 3nx4_A           80 -GQEVLLTG---------WG------------VGE-NHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVM  136 (324)
T ss_dssp             -TCEEEEEC---------TT------------BTT-TBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCEEEEcc---------cc------------cCC-CCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHH
Confidence             78886533         10            111 257999999999999999999999999999887 456677665 


Q ss_pred             --hccCcCCCC-EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHh
Q psy1413         310 --RRAGVTLGS-KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       310 --~~~~~~~~~-~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~  385 (408)
                        .+..+++++ ++||+|+ |++|++++|+|+.+|++ |++++++++|++.++++|+++++|+++.    +.   +++++
T Consensus       137 ~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~vi~~~~~----~~---~~~~~  208 (324)
T 3nx4_A          137 ALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQ-VAAVSGRESTHGYLKSLGANRILSRDEF----AE---SRPLE  208 (324)
T ss_dssp             HHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCGGGHHHHHHHTCSEEEEGGGS----SC---CCSSC
T ss_pred             HhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCCEEEecCCH----HH---HHhhc
Confidence              455566632 4999999 99999999999999995 9999999999999999999999998762    11   44444


Q ss_pred             cCCCCceEEEcccchhhhhhc
Q psy1413         386 QGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       386 ~~~~~d~i~d~~g~~~~~~~~  406 (408)
                       +.++|++|||+|++ .++.+
T Consensus       209 -~~~~d~v~d~~g~~-~~~~~  227 (324)
T 3nx4_A          209 -KQLWAGAIDTVGDK-VLAKV  227 (324)
T ss_dssp             -CCCEEEEEESSCHH-HHHHH
T ss_pred             -CCCccEEEECCCcH-HHHHH
Confidence             35899999999976 44443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.82  E-value=1.3e-20  Score=196.95  Aligned_cols=199  Identities=21%  Similarity=0.242  Sum_probs=162.5

Q ss_pred             cceeeeccccc--CCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCc
Q psy1413          72 RFSLRFREQKP--IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGG  149 (408)
Q Consensus        72 p~~~~~~~~~~--lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG  149 (408)
                      ++.+.+ +..+  .|.+.+.++++.+.++++|+.++.+.. |..     .....+|.|+.|+|..+|+..+.++.     
T Consensus       221 ~~~L~~-~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~-G~~-----~~~~~lG~E~aG~V~~vG~~V~~~~v-----  288 (795)
T 3slk_A          221 LDGLAL-VDEPTATAPLGDGEVRIAMRAAGVNFRDALIAL-GMY-----PGVASLGSEGAGVVVETGPGVTGLAP-----  288 (795)
T ss_dssp             STTEEE-CCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTT-TCC-----SSCCCSCCCEEEEEEEECSSCCSSCT-----
T ss_pred             ccceEE-EeCCccCCCCCCCEEEEEEEEEccCHHHHHHHc-CCC-----CCCccccceeEEEEEEeCCCCCcCCC-----
Confidence            455666 3333  355778889999999999988876542 211     22335899999999999976554554     


Q ss_pred             EEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEE
Q psy1413         150 CLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV  229 (408)
Q Consensus       150 ~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kv  229 (408)
                                                                                                      
T Consensus       289 --------------------------------------------------------------------------------  288 (795)
T 3slk_A          289 --------------------------------------------------------------------------------  288 (795)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhh
Q psy1413         230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHA  308 (408)
Q Consensus       230 vi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~  308 (408)
                         +|+|..                             ...|+|++|++++++.++++|+++++++++.++ .+.|+|++
T Consensus       289 ---GDrV~~-----------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~a  336 (795)
T 3slk_A          289 ---GDRVMG-----------------------------MIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYA  336 (795)
T ss_dssp             ---TCEEEE-----------------------------CCSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCC
T ss_pred             ---CCEEEE-----------------------------EecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHH
Confidence               888853                             135899999999999999999999999999988 57788888


Q ss_pred             h-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         309 C-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       309 ~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      + +...+++++++||+|+ |++|++++|+++.+|++ |+++++++ |.+.++ +|+++++|+++    .++.+.++++|+
T Consensus       337 l~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~-V~~t~~~~-k~~~l~-lga~~v~~~~~----~~~~~~i~~~t~  409 (795)
T 3slk_A          337 LVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAE-VYATASED-KWQAVE-LSREHLASSRT----CDFEQQFLGATG  409 (795)
T ss_dssp             CCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCC-EEEECCGG-GGGGSC-SCGGGEECSSS----STHHHHHHHHSC
T ss_pred             HHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCE-EEEEeChH-Hhhhhh-cChhheeecCC----hhHHHHHHHHcC
Confidence            7 6689999999999998 99999999999999997 88887665 555555 99999999987    788999999999


Q ss_pred             CCCCceEEEcccchh
Q psy1413         387 GEQPDKTIDCSGIES  401 (408)
Q Consensus       387 ~~~~d~i~d~~g~~~  401 (408)
                      ++++|+|||++|++.
T Consensus       410 g~GvDvVld~~gg~~  424 (795)
T 3slk_A          410 GRGVDVVLNSLAGEF  424 (795)
T ss_dssp             SSCCSEEEECCCTTT
T ss_pred             CCCeEEEEECCCcHH
Confidence            999999999998753

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=99.74  E-value=6.6e-18  Score=160.74  Aligned_cols=129  Identities=16%  Similarity=0.166  Sum_probs=106.1

Q ss_pred             ccceeEEeeccce--eeeCCC---CCCcccccccchhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413         271 GNLSRYYRHAADF--CHKLPD---HVSLEEGALLEPLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASR  343 (408)
Q Consensus       271 g~~~~~~~~~~~~--~~~~p~---~~~~~~aa~~~~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~  343 (408)
                      |+|++|..++++.  ++++|+   +++++.+++..+..|+|+++ +...+++++++||+|+ |++|+.++|+++.+|++ 
T Consensus       104 g~~aey~~v~~~~~~~~~ip~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~-  182 (345)
T 2j3h_A          104 VAWEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY-  182 (345)
T ss_dssp             EESBSEEEECCCTTTCEEECCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCE-
T ss_pred             cCceeEEEecccccceeecCCCCCCHHHHHHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCE-
Confidence            7899999998876  999996   34555444434788999998 6688999999999998 99999999999999995 


Q ss_pred             EEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         344 VVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       344 vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      |+++++++++++.++ ++|++.++|+++.   +++.+.++++++ +++|++||++|+. .++.
T Consensus       183 V~~~~~~~~~~~~~~~~~g~~~~~d~~~~---~~~~~~~~~~~~-~~~d~vi~~~g~~-~~~~  240 (345)
T 2j3h_A          183 VVGSAGSKEKVDLLKTKFGFDDAFNYKEE---SDLTAALKRCFP-NGIDIYFENVGGK-MLDA  240 (345)
T ss_dssp             EEEEESSHHHHHHHHHTSCCSEEEETTSC---SCSHHHHHHHCT-TCEEEEEESSCHH-HHHH
T ss_pred             EEEEeCCHHHHHHHHHHcCCceEEecCCH---HHHHHHHHHHhC-CCCcEEEECCCHH-HHHH
Confidence            999999999999997 7999999987652   355666777764 6899999999984 4444

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=99.74  E-value=3.4e-17  Score=155.04  Aligned_cols=126  Identities=21%  Similarity=0.182  Sum_probs=106.7

Q ss_pred             ccceeEEeeccceeeeCCCC----CCccc-cccc-chhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCC
Q psy1413         271 GNLSRYYRHAADFCHKLPDH----VSLEE-GALL-EPLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGAS  342 (408)
Q Consensus       271 g~~~~~~~~~~~~~~~~p~~----~~~~~-aa~~-~~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~  342 (408)
                      |+|++|+.++++.++++|++    +++++ ++.+ .++.|+|+++ +...+++++++||+|+ |++|+.++|+++.+|++
T Consensus        93 g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~  172 (333)
T 1v3u_A           93 SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCK  172 (333)
T ss_dssp             CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCE
T ss_pred             CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCE
Confidence            78999999999999999997    77775 3444 4788999998 6678999999999999 99999999999999995


Q ss_pred             eEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       343 ~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                       |+++++++++++.++++|++.++|..+.   +++.+.+.+++. +++|++||++|+..
T Consensus       173 -V~~~~~~~~~~~~~~~~g~~~~~d~~~~---~~~~~~~~~~~~-~~~d~vi~~~g~~~  226 (333)
T 1v3u_A          173 -VVGAAGSDEKIAYLKQIGFDAAFNYKTV---NSLEEALKKASP-DGYDCYFDNVGGEF  226 (333)
T ss_dssp             -EEEEESSHHHHHHHHHTTCSEEEETTSC---SCHHHHHHHHCT-TCEEEEEESSCHHH
T ss_pred             -EEEEeCCHHHHHHHHhcCCcEEEecCCH---HHHHHHHHHHhC-CCCeEEEECCChHH
Confidence             9999999999999999999999987542   456677777775 58999999999753

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=99.73  E-value=7.9e-18  Score=157.16  Aligned_cols=124  Identities=22%  Similarity=0.270  Sum_probs=105.5

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI  346 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~  346 (408)
                      +|+|++|+.++++.++++|+++++++++.++ ++.|+++++. .. +++++++||+|+ |++|++++|+++.+|++ |++
T Consensus        78 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~-Vi~  155 (302)
T 1iz0_A           78 QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLR-VLA  155 (302)
T ss_dssp             SCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCE-EEE
T ss_pred             CcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEE
Confidence            5999999999999999999999999887776 8889999985 56 999999999999 99999999999999995 999


Q ss_pred             EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      +++++++++.++++|++.++++++   .+++.+.+      +++|++|| +|+ .+++.+
T Consensus       156 ~~~~~~~~~~~~~~ga~~~~~~~~---~~~~~~~~------~~~d~vid-~g~-~~~~~~  204 (302)
T 1iz0_A          156 AASRPEKLALPLALGAEEAATYAE---VPERAKAW------GGLDLVLE-VRG-KEVEES  204 (302)
T ss_dssp             EESSGGGSHHHHHTTCSEEEEGGG---HHHHHHHT------TSEEEEEE-CSC-TTHHHH
T ss_pred             EeCCHHHHHHHHhcCCCEEEECCc---chhHHHHh------cCceEEEE-CCH-HHHHHH
Confidence            999999999999999999998743   12333333      58999999 987 444443

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=99.62  E-value=6.8e-17  Score=153.89  Aligned_cols=228  Identities=20%  Similarity=0.253  Sum_probs=175.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR-------------------   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~-------------------   61 (408)
                      |+++|||++|++++. |   .++.++|.++|||++|+|+++|++|++|++||||.+.+...                   
T Consensus        33 v~a~gic~~D~~~~~-G---~~~~~~p~i~GhE~aG~V~~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~  108 (348)
T 4eez_A           33 MEYCGVCHTDLHVAA-G---DFGNKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREV  108 (348)
T ss_dssp             EEEEECCHHHHHHHT-T---TTCCCTTCBCCSEEEEEEEEECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTC
T ss_pred             EEEEEECHHHHHHhc-C---CCCCCCCcccceeEEEEEEEECceeeecccCCeEeecccccccCccccccCCcccccccc
Confidence            579999999999985 3   34567899999999999999999999999999998654221                   


Q ss_pred             ---------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC
Q psy1413          62 ---------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        62 ---------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                                     ..+...++..|+++++++++.++.+..+++.+....-...+++++|+|+|++|..++++++.++.
T Consensus       109 ~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g  188 (348)
T 4eez_A          109 KNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFG  188 (348)
T ss_dssp             EEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSC
T ss_pred             cccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCC
Confidence                           22233445556666664445555444444322111111258899999999999888888775432


Q ss_pred             -------------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCCC
Q psy1413         127 -------------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQD  160 (408)
Q Consensus       127 -------------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~  160 (408)
                                                                 .++.++++++...   +++++++++|+++.+|.+...
T Consensus       189 ~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~  268 (348)
T 4eez_A          189 AKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTE  268 (348)
T ss_dssp             CEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCE
T ss_pred             CEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCC
Confidence                                                       2345566666543   679999999999999999888


Q ss_pred             cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCce
Q psy1413         161 VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRV  236 (408)
Q Consensus       161 ~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v  236 (408)
                      ..++...+++|++++.|++..+ .+++++++++++|++++   ++++|||+|+++||+.+++++.. +|+|+++++.
T Consensus       269 ~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~p---~~~~~~l~~~~~A~~~l~~g~~~-GKvVl~~skL  341 (348)
T 4eez_A          269 MTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVKP---IVATRKLEEINDIIDEMKAGKIE-GRMVIDFTKL  341 (348)
T ss_dssp             EEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCCC---CEEEECGGGHHHHHHHHHTTCCS-SEEEEECC--
T ss_pred             CccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCEE---EEEEEeHHHHHHHHHHHHCCCCc-cEEEEEcccc
Confidence            9999999999999999999887 78999999999999864   45899999999999999998764 5999999876

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.55  E-value=1.4e-14  Score=126.48  Aligned_cols=114  Identities=22%  Similarity=0.313  Sum_probs=89.1

Q ss_pred             ceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH
Q psy1413         282 DFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK  358 (408)
Q Consensus       282 ~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~  358 (408)
                      +.++++|+++++++++.++ ++.|+++++ +...+++++++||+|+ |++|+.++|+++..|++ |+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~-V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGAR-IYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCE-EEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Confidence            4688999999999999886 888999998 4578999999999997 99999999999999996 999999999998888


Q ss_pred             HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         359 EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       359 ~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ++|++.+++.++    ++..+.+.+.+.++++|++||++|..
T Consensus        81 ~~g~~~~~d~~~----~~~~~~~~~~~~~~~~D~vi~~~g~~  118 (198)
T 1pqw_A           81 RLGVEYVGDSRS----VDFADEILELTDGYGVDVVLNSLAGE  118 (198)
T ss_dssp             TTCCSEEEETTC----STHHHHHHHHTTTCCEEEEEECCCTH
T ss_pred             HcCCCEEeeCCc----HHHHHHHHHHhCCCCCeEEEECCchH
Confidence            999999988776    56677777777667899999999853

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.52  E-value=2.1e-14  Score=165.42  Aligned_cols=137  Identities=15%  Similarity=0.146  Sum_probs=119.4

Q ss_pred             eecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHH
Q psy1413         262 FFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARA  338 (408)
Q Consensus       262 ~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~  338 (408)
                      ++++.. ..|+|++|+.++++.++++|+++++++||.++ .+.|+|+++ ....++++++|||+|+ |++|++++|+|+.
T Consensus      1612 rV~g~~-~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~ 1690 (2512)
T 2vz8_A         1612 RVMGMV-PAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALS 1690 (2512)
T ss_dssp             CEEEEC-SSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHH
T ss_pred             EEEEee-cCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHH
Confidence            344432 35899999999999999999999999999988 678889988 5678999999999998 9999999999999


Q ss_pred             hCCCeEEEEecChhhHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413         339 LGASRVVITDILEHKLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL  405 (408)
Q Consensus       339 ~Ga~~vv~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~  405 (408)
                      +|++ |++++++++|.+.+++    +|+++++++++    .++.+.+++.++++++|+||||+|+ ..++.
T Consensus      1691 ~Ga~-Viat~~s~~k~~~l~~~~~~lga~~v~~~~~----~~~~~~i~~~t~g~GvDvVld~~g~-~~l~~ 1755 (2512)
T 2vz8_A         1691 RGCR-VFTTVGSAEKRAYLQARFPQLDETCFANSRD----TSFEQHVLRHTAGKGVDLVLNSLAE-EKLQA 1755 (2512)
T ss_dssp             TTCE-EEEEESCHHHHHHHHHHCTTCCSTTEEESSS----SHHHHHHHHTTTSCCEEEEEECCCH-HHHHH
T ss_pred             cCCE-EEEEeCChhhhHHHHhhcCCCCceEEecCCC----HHHHHHHHHhcCCCCceEEEECCCc-hHHHH
Confidence            9996 8889899999998876    78999999987    7888999999988999999999984 34443

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=99.49  E-value=3.8e-15  Score=142.44  Aligned_cols=225  Identities=21%  Similarity=0.251  Sum_probs=172.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCC-CCCCCCEEEE-cc--------------------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK-HLKVDNQTRF-VP--------------------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~-~~~vGdrV~~-~~--------------------   58 (408)
                      |+++|||++|++.+. |.++  ..++|.++|||++|+|+++|++|+ +|++||||++ ..                    
T Consensus        40 v~a~gi~~~D~~~~~-g~~~--~~~~p~v~GhE~~G~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~  116 (360)
T 1piw_A           40 IEACGVCGSDIHCAA-GHWG--NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTK  116 (360)
T ss_dssp             EEEEEECHHHHHHHT-TTTS--CCCSSEECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTT
T ss_pred             EEEeccchhhHHHhc-CCCC--CCCCCcccCcCceEEEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcc
Confidence            479999999999985 3222  246799999999999999999999 9999999942 11                    


Q ss_pred             --------------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccc
Q psy1413          59 --------------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFR  117 (408)
Q Consensus        59 --------------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~  117 (408)
                                          +|...+...++..|++++++++++++.+..+++.+... ..+ .+++|+|+|+|++|+++
T Consensus       117 ~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~  195 (360)
T 1piw_A          117 FVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMG  195 (360)
T ss_dssp             CEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHH
T ss_pred             hhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHH
Confidence                                11223344566677777775556666555554432222 233 58899999999999999


Q ss_pred             ccccccccC--------------------------------------cceeEEEccCc--h---HHHHhhccCCcEEEEE
Q psy1413         118 LSDPMIVGH--------------------------------------EASGIVSKVGA--K---VKHLKATRPGGCLVIV  154 (408)
Q Consensus       118 i~~a~~~G~--------------------------------------~~~~vv~~~g~--~---~~~~~~l~~gG~iv~~  154 (408)
                      +|+++.+|+                                      .++.+++++|.  .   .+++++++++|+++.+
T Consensus       196 ~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~  275 (360)
T 1piw_A          196 TLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSI  275 (360)
T ss_dssp             HHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEEC
T ss_pred             HHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEe
Confidence            998887664                                      14566778776  2   2689999999999999


Q ss_pred             ccCCCCc-ccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccch--HHHHHHHHHcCCCCceEEE
Q psy1413         155 GAGSQDV-KIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLED--TLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       155 G~~~~~~-~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~--~~~a~~~~~~~~~~~~kvv  230 (408)
                      |.... . .++...++.|++++.|++..+ ++++++++++++|++++.  + ++|||+|  +++||+.+.+++. .+|++
T Consensus       276 g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~--i-~~~~l~~~~~~~A~~~~~~~~~-~gKvv  350 (360)
T 1piw_A          276 SIPEQ-HEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIKIW--V-ETLPVGEAGVHEAFERMEKGDV-RYRFT  350 (360)
T ss_dssp             CCCCS-SCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHTTCCCC--E-EEEESSHHHHHHHHHHHHHTCC-SSEEE
T ss_pred             cCCCC-ccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCcce--E-EEEeccHhHHHHHHHHHHCCCC-ceEEE
Confidence            98766 4 567777899999999998776 789999999999998654  6 9999999  9999999988654 56888


Q ss_pred             EEcC
Q psy1413         231 IHCD  234 (408)
Q Consensus       231 i~~~  234 (408)
                      ++.+
T Consensus       351 i~~~  354 (360)
T 1piw_A          351 LVGY  354 (360)
T ss_dssp             EECC
T ss_pred             EecC
Confidence            7754

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=99.48  E-value=7.7e-15  Score=139.88  Aligned_cols=227  Identities=19%  Similarity=0.219  Sum_probs=182.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc------cCcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV------PEFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~------~~~~~~~~~~~~~~p~~   74 (408)
                      |+++|||++|++.+. |.++ .+..+|.++|||++|+|+++|++|++|++||||+..      .++...+...++..|++
T Consensus        62 v~a~gi~~~D~~~~~-g~~~-~~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~~P~~  139 (353)
T 4dup_A           62 AEAIGVNRPDIAQRQ-GSYP-PPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKG  139 (353)
T ss_dssp             EEEEEECHHHHHHHT-TSSC-CCTTSCSSSCCEEEEEEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTT
T ss_pred             EEEEecCHHHHHHhC-CCCC-CCCCCCCccccccEEEEEEECCCCCCCCCCCEEEEecCCCceeeEEEEcHHHcEeCCCC
Confidence            469999999999985 4322 234679999999999999999999999999999863      35567777888999999


Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEE-ccCccccccccccccccC--------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYL-THGQIGDFRLSDPMIVGH--------------------------  126 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~-g~G~vG~~~i~~a~~~G~--------------------------  126 (408)
                      +++++++.++.++.+++.+......+ .+++++|+ |+|++|++++|+++..|+                          
T Consensus       140 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~  219 (353)
T 4dup_A          140 YDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINY  219 (353)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeC
Confidence            99977777887777766443222333 57899998 489999999999887775                          


Q ss_pred             ---------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-cc-cCHHHHHhcCcEEEEeecCC-Cc--
Q psy1413         127 ---------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-VK-IPLVLTMTKEIDIRGVFRYA-ND--  184 (408)
Q Consensus       127 ---------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~~-~~~~~~~~~~~~l~g~~~~~-~~--  184 (408)
                                     .++.+++++|...  +++++++++|+++.+|..... .. +++..++.|++++.|++... .+  
T Consensus       220 ~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  299 (353)
T 4dup_A          220 RSEDFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEE  299 (353)
T ss_dssp             TTSCHHHHHHHHHSSCEEEEEESCCGGGHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHH
T ss_pred             CchHHHHHHHHHhCCCceEEEECCCHHHHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhh
Confidence                           2566777777543  679999999999999977653 34 78889999999999998765 33  


Q ss_pred             --------HHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         185 --------YPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       185 --------~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                              ++++++++++|+++  ++++++|+|+|+++||+.+.+++. .+|++++
T Consensus       300 ~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~-~gKvvl~  352 (353)
T 4dup_A          300 KRAIRDDLLSEVWPLLEAGTVA--PVIHKVFAFEDVADAHRLLEEGSH-VGKVMLT  352 (353)
T ss_dssp             HHHHHHHHHHHTHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHHTCC-SSEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHCCCcc--CCcceEEeHHHHHHHHHHHHhCCC-CceEEEe
Confidence                    78899999999974  679999999999999999998764 4577775

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=99.45  E-value=1.9e-14  Score=137.21  Aligned_cols=231  Identities=16%  Similarity=0.169  Sum_probs=176.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCC-CCCCCCCEEEEc------cCcccccCCcceeccc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKV-KHLKVDNQTRFV------PEFRNVCLSPILRRRF   73 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v-~~~~vGdrV~~~------~~~~~~~~~~~~~~p~   73 (408)
                      |+++|||++|++.+. |.++ .+..+|.++|||++|+|+++|++| ++|++||||+..      .++...+...++..|+
T Consensus        56 v~a~gi~~~D~~~~~-G~~~-~~~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~iP~  133 (354)
T 2j8z_A           56 VAASALNRADLMQRQ-GQYD-PPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPE  133 (354)
T ss_dssp             EEEEECCHHHHHHHH-TSSC-CCTTSCSSSCSEEEEEEEEECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGGEEECCT
T ss_pred             EEEeecCHHHHHHhC-CCCC-CCCCCCcccceeeEEEEEEECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHHcEECCC
Confidence            469999999999985 4322 223579999999999999999999 999999999854      3555677778899999


Q ss_pred             eeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC-------------------------
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH-------------------------  126 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~-------------------------  126 (408)
                      ++++++++.++.++.+++.+......+ .+++++|+| +|++|++++++++..|+                         
T Consensus       134 ~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~  213 (354)
T 2j8z_A          134 GLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFN  213 (354)
T ss_dssp             TCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             CCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEe
Confidence            999966677877766665433222233 478899998 79999999888876664                         


Q ss_pred             -----------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCH-HHHHhcCcEEEEeecCC-C-
Q psy1413         127 -----------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPL-VLTMTKEIDIRGVFRYA-N-  183 (408)
Q Consensus       127 -----------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~-~~~~~~~~~l~g~~~~~-~-  183 (408)
                                       .++.+++++|...  +++++++++|+++.+|.... ...++. ..++.|++++.|++... . 
T Consensus       214 ~~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  293 (354)
T 2j8z_A          214 YKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDN  293 (354)
T ss_dssp             TTTSCHHHHHHHHTTTSCEEEEEESSCGGGHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCH
T ss_pred             cCChHHHHHHHHHhcCCCceEEEECCCchHHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccc
Confidence                             2455677776543  67899999999999997654 467888 78899999999987543 2 


Q ss_pred             c---------HHHHHHHHHcC-CCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         184 D---------YPIALAMVASG-KVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       184 ~---------~~~~~~l~~~g-~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      .         ++++++++++| +++++++++++|||+|+++||+.+.+++ ..+|++++.+
T Consensus       294 ~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~-~~gKvvv~~~  353 (354)
T 2j8z_A          294 KYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANK-NIGKIVLELP  353 (354)
T ss_dssp             HHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTC-CSSEEEEECC
T ss_pred             cccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCC-CCceEEEecC
Confidence            1         23578888899 5556788999999999999999998765 3568887653

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=99.45  E-value=1.5e-14  Score=138.84  Aligned_cols=229  Identities=14%  Similarity=0.078  Sum_probs=174.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc--------------CcccccCC
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP--------------EFRNVCLS   66 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~--------------~~~~~~~~   66 (408)
                      |+++|||++|++.+. +.     ..+|.++|||++|+|+++|++|++|++||||+...              ++...+..
T Consensus        43 v~a~gi~~~D~~~~~-g~-----~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~  116 (371)
T 3gqv_A           43 VEAVAINPSDTSMRG-QF-----ATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGR  116 (371)
T ss_dssp             EEEEECCGGGGC-----------CCTTSCCCSEEEEEEEEECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTT
T ss_pred             EEEEEcCHHHHHHhh-cC-----CCCCccCccccEEEEEEeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchh
Confidence            478999999999884 32     24699999999999999999999999999998543              33456667


Q ss_pred             cceeccceeeecccccCCCCCCcceEEEEee-ee------------ecCCeEEEEcc-CccccccccccccccC------
Q psy1413          67 PILRRRFSLRFREQKPIEDPDDHEVLLEMHC-VG------------ICGSDVHYLTH-GQIGDFRLSDPMIVGH------  126 (408)
Q Consensus        67 ~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~-~~------------~~g~~vlv~g~-G~vG~~~i~~a~~~G~------  126 (408)
                      .++..|+++++++++.+|....+++.+.... ..            ..+++|+|+|+ |++|++++|+++.+|+      
T Consensus       117 ~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~  196 (371)
T 3gqv_A          117 VWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC  196 (371)
T ss_dssp             CEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             heEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            7888899999866666665545544322122 11            45889999997 8999999999987775      


Q ss_pred             ----------------------------------cceeEEEccCchH---HHHhhc-cCCcEEEEEccCCC------Ccc
Q psy1413         127 ----------------------------------EASGIVSKVGAKV---KHLKAT-RPGGCLVIVGAGSQ------DVK  162 (408)
Q Consensus       127 ----------------------------------~~~~vv~~~g~~~---~~~~~l-~~gG~iv~~G~~~~------~~~  162 (408)
                                                        .++.+++++|...   .+++++ +++|+++.+|....      ...
T Consensus       197 ~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~  276 (371)
T 3gqv_A          197 SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVT  276 (371)
T ss_dssp             CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEE
T ss_pred             CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccc
Confidence                                              2566788888643   578899 59999999996442      122


Q ss_pred             cC---HHHHHhcCcEEEEeecCC-C---------cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEE
Q psy1413         163 IP---LVLTMTKEIDIRGVFRYA-N---------DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV  229 (408)
Q Consensus       163 ~~---~~~~~~~~~~l~g~~~~~-~---------~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kv  229 (408)
                      .+   ...++.|++++.|++... .         .++++++++++|++++.++++++|+|+++++||+.+.+++..+.|+
T Consensus       277 ~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkv  356 (371)
T 3gqv_A          277 TDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKL  356 (371)
T ss_dssp             EEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEE
T ss_pred             eeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEE
Confidence            22   235788999999876442 1         1358889999999999999999999999999999999999888899


Q ss_pred             EEEcCc
Q psy1413         230 MIHCDR  235 (408)
Q Consensus       230 vi~~~~  235 (408)
                      +++++.
T Consensus       357 vv~~~~  362 (371)
T 3gqv_A          357 VVRLEG  362 (371)
T ss_dssp             EEEECC
T ss_pred             EEEeCC
Confidence            988754

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=99.44  E-value=9.7e-15  Score=138.59  Aligned_cols=225  Identities=18%  Similarity=0.216  Sum_probs=172.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      |+++|||++|++.+. |.++ ...++|.++|||++|+|+++|++|+ |++||||+...      ++...+...++..|++
T Consensus        55 v~a~gi~~~D~~~~~-g~~~-~~~~~p~v~G~E~~G~V~~vG~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~~~~iP~~  131 (342)
T 4eye_A           55 VKAAGVCFPDYLMTK-GEYQ-LKMEPPFVPGIETAGVVRSAPEGSG-IKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQ  131 (342)
T ss_dssp             EEEEECCHHHHHHHT-TCSS-SCCCSSBCCCSEEEEEEEECCTTSS-CCTTCEEEEECSSCCSBSEEEECGGGEEECCTT
T ss_pred             EEEEecCHHHHHHhc-CCCC-CCCCCCCccceeEEEEEEEECCCCC-CCCCCEEEEecCCCcceEEEEEcHHHeEECCCC
Confidence            579999999999985 3322 2347899999999999999999999 99999998643      5556777888999999


Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccC--------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGH--------------------------  126 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~--------------------------  126 (408)
                      +++++++.++.++.+++.+......+ .+++++|+|+ |++|++++|+++.+|+                          
T Consensus       132 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~  211 (342)
T 4eye_A          132 LDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPL  211 (342)
T ss_dssp             SCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEES
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecC
Confidence            99966668888877776443233333 5889999996 9999999999887775                          


Q ss_pred             ---------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-cccCHHHHHhcCcEEEEeecC------C
Q psy1413         127 ---------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-VKIPLVLTMTKEIDIRGVFRY------A  182 (408)
Q Consensus       127 ---------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~~~~~~~~~~~~~~l~g~~~~------~  182 (408)
                                     .++.+++++|...  +++++++++|+++.+|..... ..++...++.|++++.|++..      .
T Consensus       212 ~~~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  291 (342)
T 4eye_A          212 EEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHA  291 (342)
T ss_dssp             STTHHHHHHHHTTTSCEEEEEESCC--CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCT
T ss_pred             chhHHHHHHHHhCCCCceEEEECCchhHHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCH
Confidence                           2455677776532  689999999999999976643 466777789999999998732      1


Q ss_pred             ----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         183 ----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       183 ----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                          ++++++++++++|   ++++++++|+|+|+++||+.+.+++. .+|++++
T Consensus       292 ~~~~~~~~~~~~l~~~g---l~~~i~~~~~l~~~~~A~~~~~~~~~-~gKvvl~  341 (342)
T 4eye_A          292 DYLYETQAGLEKLVAEG---MRPPVSARIPLSEGRQALQDFADGKV-YGKMVLV  341 (342)
T ss_dssp             THHHHHHHHHHHHHHTT---CCCCEEEEEEGGGHHHHHHHHHTTCC-CSEEEEE
T ss_pred             HHHHHHHHHHHHHHHcC---CCCCcceEEeHHHHHHHHHHHHhCCC-CceEEEe
Confidence                3488899999999   56789999999999999999998764 4566665

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=99.40  E-value=2.7e-14  Score=135.50  Aligned_cols=228  Identities=17%  Similarity=0.167  Sum_probs=177.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----------CcccccCCcce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----------EFRNVCLSPIL   69 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----------~~~~~~~~~~~   69 (408)
                      |+++|||++|++.+.+.. .....++|.++|||++|+|+++|++|++|++||||+...           ++...+...++
T Consensus        39 v~a~gi~~~D~~~~~g~~-~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~  117 (343)
T 3gaz_A           39 IEASGTNPLDAKIRAGEA-PHAQQPLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLA  117 (343)
T ss_dssp             EEEEECCHHHHHHHTTCC-GGGCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEE
T ss_pred             EEEEEeCHhhHHHhCCCC-CCCCCCCCcccCcceEEEEEEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHee
Confidence            579999999999885332 222357899999999999999999999999999998653           33455667788


Q ss_pred             eccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC---------------------
Q psy1413          70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH---------------------  126 (408)
Q Consensus        70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~---------------------  126 (408)
                      ..|+++++++++.+|..+.+++.+......+ .+++++|+| +|++|++++|+++.+|+                     
T Consensus       118 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~lGa~~  197 (343)
T 3gaz_A          118 SKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLEYVRDLGATP  197 (343)
T ss_dssp             ECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTSEE
T ss_pred             eCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCCE
Confidence            8899999866666766555555332222333 588999999 79999999999887765                     


Q ss_pred             ------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC----
Q psy1413         127 ------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA----  182 (408)
Q Consensus       127 ------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~----  182 (408)
                                        .++.+++++|...  .++++++++|+++.+|...   .++...+.+|++++.+++...    
T Consensus       198 i~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~  274 (343)
T 3gaz_A          198 IDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLA  274 (343)
T ss_dssp             EETTSCHHHHHHHHHTTSCEEEEEESSCTHHHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHH
T ss_pred             eccCCCHHHHHHHHhcCCCceEEEECCCcHHHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhc
Confidence                              2455677777543  6799999999999999765   456678899999999976531    


Q ss_pred             --------CcHHHHHHHHHcCCCCCCCcee-eeeccchHHHHHHHHHcCCC---CceEEEEEcC
Q psy1413         183 --------NDYPIALAMVASGKVDVKKLIT-HNYLLEDTLHAFETAKTGAG---NAIKVMIHCD  234 (408)
Q Consensus       183 --------~~~~~~~~l~~~g~~~~~~~i~-~~~~l~~~~~a~~~~~~~~~---~~~kvvi~~~  234 (408)
                              ++++++++++++|+++  ++++ ++|||+|+++||+.+.+++.   ..+|+++++.
T Consensus       275 ~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~  336 (343)
T 3gaz_A          275 NEGLAHFGEMLREADALVQTGKLA--PRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE  336 (343)
T ss_dssp             TCSHHHHHHHHHHHHHHHHTTCCC--CCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC
T ss_pred             ccchHHHHHHHHHHHHHHHCCCcc--cCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEec
Confidence                    4588999999999986  5688 89999999999999998875   3477777764

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=99.40  E-value=4.4e-14  Score=133.65  Aligned_cols=227  Identities=18%  Similarity=0.223  Sum_probs=177.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc-----cCccccc-CCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV-----PEFRNVC-LSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~-----~~~~~~~-~~~~~~~p~~   74 (408)
                      |+++|||++|++.+. |.   ++.++|.++|||++|+|+++|++|++|++||||++.     .+|...+ ...++..|++
T Consensus        42 v~a~gi~~~D~~~~~-G~---~~~~~P~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~G~~aey~~v~~~~~~~~~P~~  117 (334)
T 3qwb_A           42 NKYTGVNYIESYFRK-GI---YPCEKPYVLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKG  117 (334)
T ss_dssp             EEEEECCTTHHHHHH-TS---SCCCSSEECCSEEEEEEEEECTTCCSCCTTCEEEEECSSCSBSEEEEETTSSEEECCTT
T ss_pred             EEEEecCHHHHHHHC-CC---CCCCCCCccccceEEEEEEECCCCCCCCCCCEEEEeeCCcceEEEEecCcceEEECCCC
Confidence            579999999999885 43   445689999999999999999999999999999853     3555666 7788899999


Q ss_pred             eeecc---cccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC-----------------------
Q psy1413          75 LRFRE---QKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH-----------------------  126 (408)
Q Consensus        75 ~~~~~---~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~-----------------------  126 (408)
                      +++++   .+.++....+++........+ .+++++|+| +|++|++++|+++.+|+                       
T Consensus       118 ~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~  197 (334)
T 3qwb_A          118 TSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYL  197 (334)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE
T ss_pred             CCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEE
Confidence            99855   455554444444222222223 578999998 89999999999887765                       


Q ss_pred             -------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-cccCHHHHHhcCcEEEEeecC---
Q psy1413         127 -------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-VKIPLVLTMTKEIDIRGVFRY---  181 (408)
Q Consensus       127 -------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~~~~~~~~~~~~~~l~g~~~~---  181 (408)
                                         .++.+++++|...  .++++++++|+++.+|....+ ..++...++.|++++.+.+..   
T Consensus       198 ~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (334)
T 3qwb_A          198 INASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYI  277 (334)
T ss_dssp             EETTTSCHHHHHHHHTTTSCEEEEEECCGGGGHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGS
T ss_pred             EeCCCchHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEecccc
Confidence                               2566777777533  679999999999999987654 478888899999999976432   


Q ss_pred             -C-Cc----HHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         182 -A-ND----YPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       182 -~-~~----~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                       . ++    ++++++++++|++++.  ++++|||+|+++||+.+.+++. .+|++++.+
T Consensus       278 ~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~-~gKvvi~~~  333 (334)
T 3qwb_A          278 ADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADIESRKT-VGKLVLEIP  333 (334)
T ss_dssp             CSHHHHHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCC-CBEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHHHCCCccCc--eeeEEcHHHHHHHHHHHHhCCC-ceEEEEecC
Confidence             1 22    4789999999999875  8999999999999999988754 568887754

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=99.40  E-value=4.8e-15  Score=140.59  Aligned_cols=231  Identities=17%  Similarity=0.170  Sum_probs=175.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc------cCcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV------PEFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~------~~~~~~~~~~~~~~p~~   74 (408)
                      |+++|||++|++.+. |.++ ...++|.++|||++|+|+++|++|++|++||||+..      .+|...+...++..|++
T Consensus        39 v~a~gi~~~D~~~~~-g~~~-~~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~vP~~  116 (340)
T 3gms_A           39 MLVRPINPSDLIPIT-GAYA-HRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDS  116 (340)
T ss_dssp             EEEEECCHHHHGGGG-TTTT-TTSCSSBCCCSCCEEEEEEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGGEEECCTT
T ss_pred             EEEecCCHHHHHHhc-CCCC-CCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHHeEECCCC
Confidence            579999999999985 3322 235789999999999999999999999999999854      35556777788999999


Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccC-ccccccccccccccC--------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHG-QIGDFRLSDPMIVGH--------------------------  126 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G-~vG~~~i~~a~~~G~--------------------------  126 (408)
                      +++++++.++....+++........+ .+++++|+|+| ++|++++|+++.+|+                          
T Consensus       117 l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~  196 (340)
T 3gms_A          117 IDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDT  196 (340)
T ss_dssp             SCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEET
T ss_pred             CCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeC
Confidence            99977666665555554333222333 47899999865 899999999887765                          


Q ss_pred             ----------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCHHHHH-hcCcEEEEeec-------
Q psy1413         127 ----------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPLVLTM-TKEIDIRGVFR-------  180 (408)
Q Consensus       127 ----------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~-~~~~~l~g~~~-------  180 (408)
                                      .++.+++++|...  +.+++|+++|+++.+|..... .++...+. .+++++...+.       
T Consensus       197 ~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (340)
T 3gms_A          197 STAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEV  275 (340)
T ss_dssp             TTSCHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTSC-CCCHHHHHHTSCCEEEECCHHHHHHHS
T ss_pred             CcccHHHHHHHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEeecCCC-CCCHHHhhhcccceEEEEEehhhhhhc
Confidence                            2556677777543  567999999999999976542 44554443 34555555431       


Q ss_pred             ---C-CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCc
Q psy1413         181 ---Y-ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDR  235 (408)
Q Consensus       181 ---~-~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~  235 (408)
                         . .++++++++++++|++++.+ ++++|||+|+++||+.+.+++...+||+++..+
T Consensus       276 ~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~  333 (340)
T 3gms_A          276 SPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE  333 (340)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred             CHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence               1 25689999999999999875 799999999999999999987666888888654

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=99.40  E-value=7.1e-14  Score=132.32  Aligned_cols=223  Identities=13%  Similarity=0.071  Sum_probs=172.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCC----ccEEEEEeCCCCCCCCCCCEEEEc---cCcccccCCcceeccc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE----ASGIVSKVGAKVKHLKVDNQTRFV---PEFRNVCLSPILRRRF   73 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE----~~G~Vv~vG~~v~~~~vGdrV~~~---~~~~~~~~~~~~~~p~   73 (408)
                      |+++|||++|++.+. +.   ....+|.++|||    ++|+|++  ++|++|++||||+..   .+|...+...++..|+
T Consensus        45 v~a~gi~~~d~~~~~-~~---~~~~~p~~~G~e~g~~~~G~V~~--~~v~~~~vGdrV~~~G~~aey~~v~~~~~~~~P~  118 (336)
T 4b7c_A           45 NEYLSLDPAMRGWMN-DA---RSYIPPVGIGEVMRALGVGKVLV--SKHPGFQAGDYVNGALGVQDYFIGEPKGFYKVDP  118 (336)
T ss_dssp             EEEEECCTHHHHHHS-CS---CCSSCCCCTTSBCCCEEEEEEEE--ECSTTCCTTCEEEEECCSBSEEEECCTTCEEECT
T ss_pred             EEEEEeCHHHHhhhh-cc---cccCCCCCCCcccCCceEEEEEe--cCCCCCCCCCEEeccCCceEEEEechHHeEEcCC
Confidence            579999999998874 22   233568888888    7999999  558999999999864   4666788889999999


Q ss_pred             eeeeccc--ccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccC-----------------------
Q psy1413          74 SLRFREQ--KPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGH-----------------------  126 (408)
Q Consensus        74 ~~~~~~~--~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~-----------------------  126 (408)
                      +++..+.  +.++.++.+++.+......+ .+++++|+|+ |++|++++|+++..|+                       
T Consensus       119 ~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~  198 (336)
T 4b7c_A          119 SRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG  198 (336)
T ss_dssp             TTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE
T ss_pred             CCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE
Confidence            9866455  66777777776443233333 5889999996 9999999988877665                       


Q ss_pred             -------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCC-----C--CcccCHHHHHhcCcEEEEe
Q psy1413         127 -------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGS-----Q--DVKIPLVLTMTKEIDIRGV  178 (408)
Q Consensus       127 -------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-----~--~~~~~~~~~~~~~~~l~g~  178 (408)
                                         .++.+++++|...  .++++++++|+++.+|...     .  ...++...++.|++++.|+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~  278 (336)
T 4b7c_A          199 AIDYKNEDLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGM  278 (336)
T ss_dssp             EEETTTSCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEEC
T ss_pred             EEECCCHHHHHHHHHhcCCCceEEEECCCcchHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEE
Confidence                               2556677777532  6789999999999999755     1  2466777899999999998


Q ss_pred             ecCC------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         179 FRYA------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       179 ~~~~------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +...      ++++++++++++|++++...+  +|+|+|+++||+.+.+++ ..+|++++
T Consensus       279 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~--~~~l~~~~~A~~~~~~~~-~~gKvvi~  335 (336)
T 4b7c_A          279 VVMDYAQRFPEGLKEMATWLAEGKLQSREDI--VEGLETFPETLLKLFSGE-NFGKLVLK  335 (336)
T ss_dssp             CGGGGGGGHHHHHHHHHHHHHTTSSCCCEEE--EECGGGHHHHHHHHHTTC-CCSEEEEE
T ss_pred             EhhhhhhhhHHHHHHHHHHHHCCCcccceee--ecCHHHHHHHHHHHHcCC-CCceEEEe
Confidence            8653      568899999999999877544  479999999999999875 44688775

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=99.38  E-value=3e-14  Score=135.62  Aligned_cols=225  Identities=15%  Similarity=0.103  Sum_probs=171.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCC-CCCCCCCEEEEcc---------CcccccCCccee
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKV-KHLKVDNQTRFVP---------EFRNVCLSPILR   70 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v-~~~~vGdrV~~~~---------~~~~~~~~~~~~   70 (408)
                      |+++|||++|++.+. |.++ .+.++|.++|||++|+|+++|++| ++|++||||++..         +|...+...++.
T Consensus        56 v~a~gi~~~D~~~~~-G~~~-~~~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~  133 (349)
T 3pi7_A           56 VNLASINPSDVAFIK-GQYG-QPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIP  133 (349)
T ss_dssp             EEEEECCHHHHHHHT-TCSS-SCBCTTSBCCSEEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEE
T ss_pred             EEEecCCHHHHHHhc-ccCC-CCCCCCCCccceEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEE
Confidence            579999999999985 4322 235789999999999999999999 9999999998653         344666778889


Q ss_pred             ccceeeecccccCCCCCCcceEEEEeeeeecC-CeEEEE-ccCccccccccccccccC----------------------
Q psy1413          71 RRFSLRFREQKPIEDPDDHEVLLEMHCVGICG-SDVHYL-THGQIGDFRLSDPMIVGH----------------------  126 (408)
Q Consensus        71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g-~~vlv~-g~G~vG~~~i~~a~~~G~----------------------  126 (408)
                      .|+++++++++.++....+++ .........+ ++++|. |+|++|++++|+++.+|+                      
T Consensus       134 iP~~~~~~~aa~l~~~~~ta~-~~~~~~~~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~  212 (349)
T 3pi7_A          134 LLDTVRDEDGAAMIVNPLTAI-AMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAH  212 (349)
T ss_dssp             CCTTCCC--GGGSSHHHHHHH-HHHHHHHHHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSE
T ss_pred             CCCCCCHHHHhhccccHHHHH-HHHHHHhhCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE
Confidence            999999977776666555554 2222222345 567776 699999999999988775                      


Q ss_pred             --------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCC-CCcccCH-HHHHhcCcEEEEeecC-
Q psy1413         127 --------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGS-QDVKIPL-VLTMTKEIDIRGVFRY-  181 (408)
Q Consensus       127 --------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-~~~~~~~-~~~~~~~~~l~g~~~~-  181 (408)
                                          .++.+++++|...  +++++++++|+++.+|... .+..++. ..+++|++++.|++.. 
T Consensus       213 ~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  292 (349)
T 3pi7_A          213 VLNEKAPDFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSE  292 (349)
T ss_dssp             EEETTSTTHHHHHHHHHHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHH
T ss_pred             EEECCcHHHHHHHHHHhcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehh
Confidence                                2556677776543  6799999999999999654 4667887 8899999999998753 


Q ss_pred             ---------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         182 ---------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       182 ---------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                               .++++++++++++|++  +++++++|||+|+++||+.+.++  ..+|++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~--~~gKvvl~  348 (349)
T 3pi7_A          293 WMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPLAEAIAWVPAELTK--PNGKVFIR  348 (349)
T ss_dssp             HHHHTHHHHHHHHHHC-CTTTTSSC--CC-CCEEEEHHHHHHHHHHHHTS--SSSCEEEE
T ss_pred             hhhhCcHHHHHHHHHHHHHHHcCCc--ccccceEEcHHHHHHHHHHHhCC--CCceEEEe
Confidence                     2457888899999998  45799999999999999955543  44677775

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=99.38  E-value=5.9e-14  Score=132.69  Aligned_cols=229  Identities=16%  Similarity=0.141  Sum_probs=174.5

Q ss_pred             CCeeeecccchhhhhcCCC-CCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCCcceecc
Q psy1413           1 MHCVGICGSDVHYLTHGQI-GDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLSPILRRR   72 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~-~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~~~~~~p   72 (408)
                      |+++|||++|++.+. |.+ +.....+|.++|||++|+|+++|++|++|++||||+..+       +|...+...++..|
T Consensus        35 v~a~gi~~~D~~~~~-G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP  113 (333)
T 1wly_A           35 NTAIGVNFLDTYHRA-GIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVP  113 (333)
T ss_dssp             EEEEEECHHHHHHHC-----------CCEECCCEEEEEEEEECTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGGCEECC
T ss_pred             EEEEecCHHHHHHhC-CCcCCCCCCCCCccccceeEEEEEEECCCCCCCCCCCEEEEecCCCCcceeEEEecHHHcEeCC
Confidence            469999999999884 422 111135799999999999999999999999999997643       34456667888899


Q ss_pred             ceeeecc--cccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC----------------------
Q psy1413          73 FSLRFRE--QKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH----------------------  126 (408)
Q Consensus        73 ~~~~~~~--~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~----------------------  126 (408)
                      +++++++  ++.++.++.+++.+......+ .+++++|+| +|++|++++++++..|+                      
T Consensus       114 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~  193 (333)
T 1wly_A          114 KDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHH  193 (333)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE
T ss_pred             CCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE
Confidence            9999966  577777666665433222233 478899999 59999998888776664                      


Q ss_pred             --------------------cceeEEEccCch--HHHHhhccCCcEEEEEccCCC-CcccCHH-HHHhcC--cEEEEeec
Q psy1413         127 --------------------EASGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQ-DVKIPLV-LTMTKE--IDIRGVFR  180 (408)
Q Consensus       127 --------------------~~~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~-~~~~~~~-~~~~~~--~~l~g~~~  180 (408)
                                          .++.+++++|..  .+++++++++|+++.+|.... ...++.. .++.|+  +++.|++.
T Consensus       194 ~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  273 (333)
T 1wly_A          194 TINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALW  273 (333)
T ss_dssp             EEETTTSCHHHHHHHHHTTCCEEEEEECSCTTTHHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGG
T ss_pred             EEECCCHHHHHHHHHHhCCCCCeEEEECCcHHHHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeeh
Confidence                                245667777753  268999999999999997763 4667777 788999  99998754


Q ss_pred             C---C-----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         181 Y---A-----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       181 ~---~-----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      .   +     ++++++++++++|+++  ++++++|||+|+++||+.+.+++. .+|++++.
T Consensus       274 ~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~-~gKvvi~~  331 (333)
T 1wly_A          274 HYMSNRSEIDEGSKCLFDAVKAGVLH--SSVAKTFPLREAAAAHKYMGGRQT-IGSIVLLP  331 (333)
T ss_dssp             GGSCSHHHHHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCSC-CSEEEEET
T ss_pred             hhccCHHHHHHHHHHHHHHHHCCCcC--CCcceEEeHHHHHHHHHHHHcCCC-ceEEEEEe
Confidence            1   2     2588999999999985  579999999999999999988754 56888765

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=99.37  E-value=1.1e-13  Score=131.71  Aligned_cols=227  Identities=21%  Similarity=0.265  Sum_probs=171.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCCcceeccc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLSPILRRRF   73 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~~~~~~p~   73 (408)
                      |+++|||++|++.+. |.++ ....+|.++|||++|+|+++|++|++|++||||+..+       +|...+...++..|+
T Consensus        64 v~a~gi~~~D~~~~~-G~~~-~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~  141 (351)
T 1yb5_A           64 VHACGVNPVETYIRS-GTYS-RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPE  141 (351)
T ss_dssp             EEEEECCHHHHHHHH-TCSS-CCCCSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCT
T ss_pred             EEEEecCHHHHHHhC-CCCC-CCCCCCCcCCceeEEEEEEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHHeEECCC
Confidence            469999999999885 4322 1246799999999999999999999999999998753       345666778889999


Q ss_pred             eeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccC-------------------------
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGH-------------------------  126 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~-------------------------  126 (408)
                      ++++++++.++.++.+++.+......+ .+++++|+|+ |++|++++|+++..|+                         
T Consensus       142 ~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d  221 (351)
T 1yb5_A          142 KLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFN  221 (351)
T ss_dssp             TSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEe
Confidence            999966677777766665433222233 4789999995 9999999988877665                         


Q ss_pred             -----------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecC--C-Cc
Q psy1413         127 -----------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY--A-ND  184 (408)
Q Consensus       127 -----------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~--~-~~  184 (408)
                                       .++.+++++|...  +++++++++|+++.+|.. .+..++...++.|++++.|+...  + ++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  300 (351)
T 1yb5_A          222 HREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEE  300 (351)
T ss_dssp             TTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGGCCHHH
T ss_pred             CCCchHHHHHHHHcCCCCcEEEEECCChHHHHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEEEEeecCCHHH
Confidence                             2445566666432  678999999999999965 34667778889999999998532  2 34


Q ss_pred             HHH----HHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         185 YPI----ALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       185 ~~~----~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      +++    +.+++++|++  +++++++|||+|+++||+.+.+++...+|++++
T Consensus       301 ~~~~~~~l~~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~  350 (351)
T 1yb5_A          301 FQQYAAALQAGMEIGWL--KPVIGSQYPLEKVAEAHENIIHGSGATGKMILL  350 (351)
T ss_dssp             HHHHHHHHHHHHHHTCC--CCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEE
T ss_pred             HHHHHHHHHHHHHCCCc--cCccceEEcHHHHHHHHHHHHHhCCCCeEEEEe
Confidence            544    5557778876  467999999999999999954444456788775

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=99.37  E-value=9.7e-14  Score=131.89  Aligned_cols=225  Identities=13%  Similarity=0.154  Sum_probs=174.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCcceec
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILRR   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~~   71 (408)
                      |+++|||++|++.+. |.    ..++|.++|||++|+|+++|++|++|++||||+...         +|...+...++..
T Consensus        39 v~a~gi~~~D~~~~~-g~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~i  113 (346)
T 3fbg_A           39 IQSISVNPVDTKQRL-MD----VSKAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKA  113 (346)
T ss_dssp             EEEEEECHHHHHHTT-SC----CSSSCBCCCCCEEEEEEEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEEC
T ss_pred             EEEEEcCHHHHHHHh-CC----CCCCCcCcCCccEEEEEEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEEC
Confidence            578999999999885 32    347899999999999999999999999999998753         3445667788889


Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeee-------cCCeEEEE-ccCccccccccccccccC-----------------
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGI-------CGSDVHYL-THGQIGDFRLSDPMIVGH-----------------  126 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-------~g~~vlv~-g~G~vG~~~i~~a~~~G~-----------------  126 (408)
                      |+++++++++.+|....+++.+......+       .+++++|+ |+|++|++++|+++.+|+                 
T Consensus       114 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~  193 (346)
T 3fbg_A          114 PKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK  193 (346)
T ss_dssp             CSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH
T ss_pred             CCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            99999977776765555554332222333       58899999 599999999999987775                 


Q ss_pred             -----------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeec
Q psy1413         127 -----------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFR  180 (408)
Q Consensus       127 -----------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~  180 (408)
                                             .++.+++++|...   .++++|+++|+++.+|..  +.+++...+..|++++.+++.
T Consensus       194 lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~--~~~~~~~~~~~~~~~~~~~~~  271 (346)
T 3fbg_A          194 MGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAF--ENDQDLNALKPKSLSFSHEFM  271 (346)
T ss_dssp             HTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCC--SSCBCGGGGTTTTCEEEECCT
T ss_pred             cCCcEEEECCccHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCC--CCCCccccccccceEEEEEEE
Confidence                                   2566778887543   678999999999998854  345667778899999998754


Q ss_pred             CC-------------CcHHHHHHHHHcCCCCCCCceeeee---ccchHHHHHHHHHcCCCCceEEEEEcCc
Q psy1413         181 YA-------------NDYPIALAMVASGKVDVKKLITHNY---LLEDTLHAFETAKTGAGNAIKVMIHCDR  235 (408)
Q Consensus       181 ~~-------------~~~~~~~~l~~~g~~~~~~~i~~~~---~l~~~~~a~~~~~~~~~~~~kvvi~~~~  235 (408)
                      ..             +.++++++++++|+++  +.++++|   +|+++++||+.+.+++. .+|++++.+.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~~~l~~~~~A~~~~~~g~~-~GKvvl~~~~  339 (346)
T 3fbg_A          272 FARPLNQTDDMIKHHEYLEDITNKVEQNIYQ--PTTTKVIEGLTTENIYQAHQILESNTM-IGKLVINLNE  339 (346)
T ss_dssp             THHHHTTCTTTHHHHHHHHHHHHHHHTTSSC--CCEEEEEESCCHHHHHHHHHHHHTTCC-CSEEEEEC--
T ss_pred             ecccccchhhHHHHHHHHHHHHHHHHCCCEE--CCccceecCCCHHHHHHHHHHHhcCCc-ceEEEEecCC
Confidence            31             2378899999999985  5688887   99999999999998764 5677777543

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=99.36  E-value=8.1e-15  Score=137.52  Aligned_cols=225  Identities=15%  Similarity=0.222  Sum_probs=166.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCcceec
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILRR   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~~   71 (408)
                      |+++|||++|++.+.+.+   ...++|.++|||++|+|+++|++|++|++||||+..+         +|...+...++..
T Consensus        36 v~a~gi~~~D~~~~~g~~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~i  112 (315)
T 3goh_A           36 NQAIGINPVDWKFIKANP---INWSNGHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTL  112 (315)
T ss_dssp             EEEEEECHHHHHHHHHCT---TCCCTTCCCCSEEEEEEEEECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTSEEEC
T ss_pred             EEEEecCHHHHHHHcCCC---CcCCCCCEeeeeeEEEEEEeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHHhccC
Confidence            479999999999986443   2347899999999999999999999999999999754         3456677788999


Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccCc-----------------------
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGHE-----------------------  127 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~~-----------------------  127 (408)
                      |+++++++++.++.++.+++.+. ....+ .+++|+|+|+|++|++++|+++.+|++                       
T Consensus       113 P~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~  191 (315)
T 3goh_A          113 PDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSASLSQALAAKRGVRHLYR  191 (315)
T ss_dssp             CTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCHHHHHHHTEEEEES
T ss_pred             cCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEChhhHHHHHHcCCCEEEc
Confidence            99999966667888877777544 33333 588999999999999999999887752                       


Q ss_pred             --------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCH--HHHHhcCcEEEEeecC-C--------CcHH
Q psy1413         128 --------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPL--VLTMTKEIDIRGVFRY-A--------NDYP  186 (408)
Q Consensus       128 --------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~--~~~~~~~~~l~g~~~~-~--------~~~~  186 (408)
                              ++.+++++|...  +++++++++|+++.+|.......++.  ..+.++++++.+.+.+ +        +.++
T Consensus       192 d~~~v~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (315)
T 3goh_A          192 EPSQVTQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGE  271 (315)
T ss_dssp             SGGGCCSCEEEEECC-------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHH
T ss_pred             CHHHhCCCccEEEECCCchhHHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHH
Confidence                    345566666432  57899999999999986543333222  2344455555454432 2        2368


Q ss_pred             HHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         187 IALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       187 ~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ++++++++|+++  ++++++|||+|+++||+.+.   ...+|++++.+
T Consensus       272 ~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~---~~~gKvvi~~~  314 (315)
T 3goh_A          272 ALLTLIAQGKME--IAAPDIFRFEQMIEALDHSE---QTKLKTVLTLN  314 (315)
T ss_dssp             HHHHHHHTTSSC--CCCCEEEEGGGHHHHHHHHH---HHCCCEEEESC
T ss_pred             HHHHHHHCCCcc--cccceEecHHHHHHHHHHHH---hcCCcEEEEec
Confidence            899999999985  67899999999999999998   34568887754

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=99.36  E-value=1.3e-13  Score=132.02  Aligned_cols=229  Identities=17%  Similarity=0.142  Sum_probs=174.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCC---------ccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------Cccccc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDP---------MIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVC   64 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P---------~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~   64 (408)
                      |+++|||++|++.+. |.++. ..++|         .++|||++|+|+++|++|++|++||||++.+       ++...+
T Consensus        40 v~a~gi~~~D~~~~~-g~~~~-~~~~P~~~~~~~p~~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~  117 (364)
T 1gu7_A           40 TLGSPVNPSDINQIQ-GVYPS-KPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGN  117 (364)
T ss_dssp             EEEEEECHHHHHHHH-TCSSC-CCCCBSTTCCSSCBEECCSCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEE
T ss_pred             EEeccCCHHHHHHhc-CCCCC-CCCCCccccccCcccccCceeEEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecC
Confidence            579999999999985 33221 12456         8999999999999999999999999998653       445666


Q ss_pred             CCcceeccc-----------eeeecccccCCCCCCcceEEEEeeeee-cC-CeEEEEcc-CccccccccccccccCc---
Q psy1413          65 LSPILRRRF-----------SLRFREQKPIEDPDDHEVLLEMHCVGI-CG-SDVHYLTH-GQIGDFRLSDPMIVGHE---  127 (408)
Q Consensus        65 ~~~~~~~p~-----------~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g-~~vlv~g~-G~vG~~~i~~a~~~G~~---  127 (408)
                      ...++..|+           ++++++++.++.++.+++.+......+ .+ ++|+|+|+ |++|++++|+|+.+|+.   
T Consensus       118 ~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~  197 (364)
T 1gu7_A          118 DDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSIS  197 (364)
T ss_dssp             GGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEE
T ss_pred             HHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEE
Confidence            778888898           788866677776666665332222233 47 89999996 99999998887766642   


Q ss_pred             ------------------------------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccC
Q psy1413         128 ------------------------------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAG  157 (408)
Q Consensus       128 ------------------------------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~  157 (408)
                                                                      ++.+++++|...  +++++++++|+++.+|..
T Consensus       198 ~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~  277 (364)
T 1gu7_A          198 VIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGM  277 (364)
T ss_dssp             EECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCC
T ss_pred             EecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCC
Confidence                                                            233444444322  568999999999999976


Q ss_pred             C-CCcccCHHHHHhcCcEEEEeecCC----------CcHHHHHHHHHcCCCCCCCceeeee-ccchHHHHHHHHHcCCCC
Q psy1413         158 S-QDVKIPLVLTMTKEIDIRGVFRYA----------NDYPIALAMVASGKVDVKKLITHNY-LLEDTLHAFETAKTGAGN  225 (408)
Q Consensus       158 ~-~~~~~~~~~~~~~~~~l~g~~~~~----------~~~~~~~~l~~~g~~~~~~~i~~~~-~l~~~~~a~~~~~~~~~~  225 (408)
                      . .+..++...+++|++++.|++...          ++++++++++++|++++.++.++.+ +|+|+.+||+.+.+++ .
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~-~  356 (364)
T 1gu7_A          278 SFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANS-K  356 (364)
T ss_dssp             SSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTG-G
T ss_pred             CCCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCC-C
Confidence            5 467788888999999999986432          4589999999999999887777777 6789999999998874 4


Q ss_pred             ceEEEEE
Q psy1413         226 AIKVMIH  232 (408)
Q Consensus       226 ~~kvvi~  232 (408)
                      .+|++++
T Consensus       357 ~gKvvv~  363 (364)
T 1gu7_A          357 DGKQLIT  363 (364)
T ss_dssp             GSCEEEE
T ss_pred             CceEEEe
Confidence            5677765

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=99.33  E-value=2.2e-13  Score=128.32  Aligned_cols=226  Identities=19%  Similarity=0.235  Sum_probs=172.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCCcceeccc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLSPILRRRF   73 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~~~~~~p~   73 (408)
                      |+++|||++|++.+. |..+  ..++|.++|||++|+|+++|++|++|++||||+...       +|...+...++..|+
T Consensus        35 v~a~gi~~~D~~~~~-g~~~--~~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~  111 (325)
T 3jyn_A           35 NKAIGLNFIDTYYRS-GLYP--APFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLAD  111 (325)
T ss_dssp             EEEEECCHHHHHHHH-TSSC--CSSSSBCCCCCEEEEEEEECTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGGEEECCT
T ss_pred             EEEEecCHHHHHHHC-CCCC--CCCCCCCCCceeEEEEEEECCCCCCCCCCCEEEEecCCCccccceEEecHHHeEECCC
Confidence            579999999999985 4322  146899999999999999999999999999998643       444566777888899


Q ss_pred             eeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC-------------------------
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH-------------------------  126 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~-------------------------  126 (408)
                      ++++++++.++....+++........+ .+++++|+| +|++|++++|+++.+|+                         
T Consensus       112 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~  191 (325)
T 3jyn_A          112 SVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETID  191 (325)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEe
Confidence            998866665554444444322222233 488999998 89999999999887765                         


Q ss_pred             -----------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCCc-ccCHHHHHhc-CcEEEEee----cC
Q psy1413         127 -----------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDV-KIPLVLTMTK-EIDIRGVF----RY  181 (408)
Q Consensus       127 -----------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~-~~~~~~~~~~-~~~l~g~~----~~  181 (408)
                                       .++.+++++|...  +++++++++|+++.+|....+. .++...++.+ ++++.+..    ..
T Consensus       192 ~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (325)
T 3jyn_A          192 YSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYAN  271 (325)
T ss_dssp             TTTSCHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSC
T ss_pred             CCCccHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecC
Confidence                             2566777777643  6799999999999999877653 6788888887 67776543    22


Q ss_pred             C-CcH----HHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         182 A-NDY----PIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       182 ~-~~~----~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      + +++    +++++++++|++++.  ++++|||+|+++||+.+.+++. .+|+++.
T Consensus       272 ~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~-~Gkvvl~  324 (325)
T 3jyn_A          272 NAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAAKAQIELSARRT-TGSTILI  324 (325)
T ss_dssp             STTHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHHHHHHHHHTTCC-CSCEEEE
T ss_pred             CHHHHHHHHHHHHHHHHCCCeeCc--cccEEcHHHHHHHHHHHHcCCC-CceEEEe
Confidence            2 444    588999999999876  7999999999999999998765 3455443

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.31  E-value=1.1e-13  Score=130.49  Aligned_cols=226  Identities=20%  Similarity=0.219  Sum_probs=172.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc-------cCcccccCCcceeccc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV-------PEFRNVCLSPILRRRF   73 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~-------~~~~~~~~~~~~~~p~   73 (408)
                      |+++|||++|++.+. |.++  ...+|.++|||++|+|+++|++|++|++||||...       .+|...+...++..|+
T Consensus        35 v~a~gi~~~D~~~~~-g~~~--~~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~g~~~G~~aey~~v~~~~~~~iP~  111 (327)
T 1qor_A           35 NKAIGINFIDTYIRS-GLYP--PPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPA  111 (327)
T ss_dssp             EEEEECCHHHHHHHH-TSSC--CSSSSBCCCSCEEEEEEEECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGGEEECCT
T ss_pred             EEEEecCHHHHHHhC-CCCC--CCCCCCCCCceeEEEEEEECCCCCCCCCCCEEEECCCCCceeeeEEEecHHHcEECCC
Confidence            469999999999985 4321  23579999999999999999999999999999543       1344566677888999


Q ss_pred             eeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC-------------------------
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH-------------------------  126 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~-------------------------  126 (408)
                      ++++++++.++.++.+++.+......+ .+++++|+| +|++|++++++++..|+                         
T Consensus       112 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~  191 (327)
T 1qor_A          112 AISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVIN  191 (327)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEE
Confidence            999866667777766665433222233 478899998 79999998888776664                         


Q ss_pred             -----------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhc-CcEEEEeec----C
Q psy1413         127 -----------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTK-EIDIRGVFR----Y  181 (408)
Q Consensus       127 -----------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~-~~~l~g~~~----~  181 (408)
                                       .++.+++++|...  +++++++++|+++.+|.... ...++...++.| ++++.+...    .
T Consensus       192 ~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (327)
T 1qor_A          192 YREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYIT  271 (327)
T ss_dssp             TTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCC
T ss_pred             CCCccHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcC
Confidence                             2566677777332  67999999999999997654 356788888888 888886432    1


Q ss_pred             -----CCcHHHHHHHHHcCCCCCCCcee--eeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         182 -----ANDYPIALAMVASGKVDVKKLIT--HNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       182 -----~~~~~~~~~l~~~g~~~~~~~i~--~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                           .+.++++++++++|++++  +++  ++|+|+|+++||+.+.+++. .+|++++
T Consensus       272 ~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~l~~~~~A~~~~~~~~~-~gKvvl~  326 (327)
T 1qor_A          272 TREELTEASNELFSLIASGVIKV--DVAEQQKYPLKDAQRAHEILESRAT-QGSSLLI  326 (327)
T ss_dssp             SHHHHHHHHHHHHHHHHTTSSCC--CCCGGGEEEGGGHHHHHHHHHTTCC-CBCCEEE
T ss_pred             CHHHHHHHHHHHHHHHHCCCccc--ccccCcEEcHHHHHHHHHHHHhCCC-CceEEEe
Confidence                 234789999999999864  588  99999999999999988653 4566654

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=99.31  E-value=3.1e-13  Score=129.21  Aligned_cols=225  Identities=15%  Similarity=0.172  Sum_probs=174.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCcceec
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILRR   71 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~~   71 (408)
                      |+++|||++|++.+.+..   ....+|.++|||++|+|+++|++|++|++||||+..+         ++...+...++..
T Consensus        59 v~a~gi~~~D~~~~~g~~---~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~i  135 (363)
T 4dvj_A           59 VKAVSVNPVDYKVRRSTP---PDGTDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRK  135 (363)
T ss_dssp             EEEEECCHHHHHHHHHCC---C--CCSBCCCCCEEEEEEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEEC
T ss_pred             EEEEEeCHHHHHHHcCCC---CCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeEC
Confidence            468999999999986432   2247899999999999999999999999999998653         3445667788889


Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeee------cCCeEEEEc-cCccccccccccccc-cC-----------------
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGI------CGSDVHYLT-HGQIGDFRLSDPMIV-GH-----------------  126 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~------~g~~vlv~g-~G~vG~~~i~~a~~~-G~-----------------  126 (408)
                      |+++++++++.+|....+++.+......+      .+++|+|+| +|++|++++|+++.+ |+                 
T Consensus       136 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~  215 (363)
T 4dvj_A          136 PKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS  215 (363)
T ss_dssp             CTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred             CCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence            99999977777765555555332223333      478899998 899999999999864 43                 


Q ss_pred             -----------------------cceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeec
Q psy1413         127 -----------------------EASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFR  180 (408)
Q Consensus       127 -----------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~  180 (408)
                                             .++.+++++|..   .+++++++++|+++.+|.   +..++...+..|++++.+++.
T Consensus       216 lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~---~~~~~~~~~~~k~~~i~~~~~  292 (363)
T 4dvj_A          216 LGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDD---PSAFDIMLFKRKAVSIHHELM  292 (363)
T ss_dssp             TTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSC---CSSCCGGGGTTTTCEEEECCT
T ss_pred             cCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECC---CCccchHHHhhccceEEEEEe
Confidence                                   256678888864   267999999999999964   346777888999999998654


Q ss_pred             CC-------------CcHHHHHHHHHcCCCCCCCceeeee---ccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         181 YA-------------NDYPIALAMVASGKVDVKKLITHNY---LLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       181 ~~-------------~~~~~~~~l~~~g~~~~~~~i~~~~---~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ..             +.++++++++++|++++  .++++|   +|+|+++||+.+.+++. .+|+++++.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~~l~~~~~A~~~~~~~~~-~GKvVl~~~  359 (363)
T 4dvj_A          293 FTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRT--TLTNRLSPINAANLKQAHALVESGTA-RGKVVIEGF  359 (363)
T ss_dssp             THHHHHTCTTTHHHHHHHHHHHHHHHHTSSCC--CEEEEECSCSHHHHHHHHHHHHHTCC-CSEEEEECS
T ss_pred             eccccccCcchhhHHHHHHHHHHHHHCCCeec--cccceecCCCHHHHHHHHHHHHhCCC-ceEEEEeCc
Confidence            21             24788999999999874  566665   99999999999998764 457777753

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=99.29  E-value=1.9e-13  Score=129.09  Aligned_cols=225  Identities=16%  Similarity=0.155  Sum_probs=164.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~   68 (408)
                      |+++|||++|++.+. |..+ ....+|.++|||++|+|+++  ++++|++||||++.+            ++...+...+
T Consensus        38 v~a~gi~~~D~~~~~-g~~~-~~~~~p~i~G~E~~G~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~  113 (330)
T 1tt7_A           38 VAYSGINYKDGLAGK-AGGN-IVREYPLILGIDAAGTVVSS--NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWL  113 (330)
T ss_dssp             ECCEEECHHHHHHTS-TTCT-TCSSCSEECCSEEEEEEEEC--SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGE
T ss_pred             EEEEecCHHHHhhhc-CCCC-CcCCCCccccceEEEEEEEc--CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHHe
Confidence            579999999999884 4321 22467999999999999996  568999999998642            3445666778


Q ss_pred             eeccceeeecccccCCCCCCcceEEE--Eeeeee-cCC-eEEEEcc-CccccccccccccccC-----------------
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLE--MHCVGI-CGS-DVHYLTH-GQIGDFRLSDPMIVGH-----------------  126 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~--~~~~~~-~g~-~vlv~g~-G~vG~~~i~~a~~~G~-----------------  126 (408)
                      +..|+++++++++.++....+++.+.  ....++ .++ +++|+|+ |++|++++|+++.+|+                 
T Consensus       114 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~  193 (330)
T 1tt7_A          114 VPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ  193 (330)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             EECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            88899998866665554443443211  111122 354 8999996 9999999998887664                 


Q ss_pred             -----------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeec
Q psy1413         127 -----------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFR  180 (408)
Q Consensus       127 -----------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~  180 (408)
                                             .++.+++++|...  +++++++++|+++.+|.... +.+++...++.|++++.|++.
T Consensus       194 lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  273 (330)
T 1tt7_A          194 LGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDS  273 (330)
T ss_dssp             HTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCS
T ss_pred             cCCcEEEECCCchHHHHHHhhcCCccEEEECCcHHHHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEec
Confidence                                   1345667776532  67999999999999998754 567777788999999999853


Q ss_pred             C--C-----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         181 Y--A-----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       181 ~--~-----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                      .  .     +.++++++++++|++  +++++++|||+|+++||+.+.+++. .+|++++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~-~gKvvi~  329 (330)
T 1tt7_A          274 VYCPMDVRAAVWERMSSDLKPDQL--LTIVDREVSLEETPGALKDILQNRI-QGRVIVK  329 (330)
T ss_dssp             SSCCHHHHHHHHHHTTTTSCCSCS--TTSEEEEECSTTHHHHHHHTTTTCC-SSEEEEC
T ss_pred             cccCHHHHHHHHHHHHHHHhcCCc--ccccceEEcHHHHHHHHHHHHcCCC-CCeEEEe
Confidence            2  2     124555566666766  4678999999999999999987754 5677764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=99.26  E-value=1.2e-12  Score=124.95  Aligned_cols=227  Identities=14%  Similarity=0.096  Sum_probs=170.3

Q ss_pred             CCeeeecccchhhhhc--C-CCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEE----ccCcccccCCcceeccc
Q psy1413           1 MHCVGICGSDVHYLTH--G-QIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF----VPEFRNVCLSPILRRRF   73 (408)
Q Consensus         1 V~a~gic~sDl~~~~~--g-~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~----~~~~~~~~~~~~~~~p~   73 (408)
                      |+++|||++|++.+..  | .+ ..+.++|.++|||++|+|++  ++|++|++||||++    +.+|...+...++..|+
T Consensus        49 v~a~gi~~~D~~~~~~~~g~~~-~~~~~~p~v~G~E~~G~V~~--~~v~~~~vGdrV~~~~G~~aey~~v~~~~~~~iP~  125 (357)
T 2zb4_A           49 TLYLSVDPYMRCRMNEDTGTDY-ITPWQLSQVVDGGGIGIIEE--SKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDP  125 (357)
T ss_dssp             EEEEECCTTHHHHTSSSCSSSS-SCCCCBTSBCEEEEEEEEEE--ECSTTCCTTCEEEEEEEESBSEEEEEGGGCEECCG
T ss_pred             EEEEecCHHHHhhccccccccc-cCCCCCCccccccEEEEEEe--cCCCCCCCCCEEEecCCCcEEEEEEchHHceecCc
Confidence            5799999999987743  1 11 11346799999999999999  89999999999985    44677778888999999


Q ss_pred             ee-----eecccccCCCCCCcceEEEEeeeee-cC--CeEEEEcc-CccccccccccccccC-c----------------
Q psy1413          74 SL-----RFREQKPIEDPDDHEVLLEMHCVGI-CG--SDVHYLTH-GQIGDFRLSDPMIVGH-E----------------  127 (408)
Q Consensus        74 ~~-----~~~~~~~lp~~~~~~~~~~~~~~~~-~g--~~vlv~g~-G~vG~~~i~~a~~~G~-~----------------  127 (408)
                      ++     ++ +.+.++.++.+++.+......+ .+  ++++|+|+ |++|++++++++..|+ +                
T Consensus       126 ~~~~~~~~~-~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~  204 (357)
T 2zb4_A          126 QLVDGHLSY-FLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS  204 (357)
T ss_dssp             GGGTTCGGG-GGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred             ccccCchhH-HHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH
Confidence            98     56 4667777766665433222233 47  88999996 9999988887776654 1                


Q ss_pred             --------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccC---------HHHHH
Q psy1413         128 --------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIP---------LVLTM  169 (408)
Q Consensus       128 --------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~---------~~~~~  169 (408)
                                                ++.+++++|...  +++++++++|+++.+|.... ...++         ...++
T Consensus       205 ~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~  284 (357)
T 2zb4_A          205 ELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQK  284 (357)
T ss_dssp             TSCCSEEEETTTSCHHHHHHHHCTTCEEEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHH
T ss_pred             HcCCceEEecCchHHHHHHHHhcCCCCCEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhh
Confidence                                      345566666432  67899999999999997543 12232         25678


Q ss_pred             hcCcEEEEeecC------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413         170 TKEIDIRGVFRY------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       170 ~~~~~l~g~~~~------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      .|++++.+++..      .++++++++++++|++++.++  .+|+|+|+++||+.+.+++. .+|++++.+
T Consensus       285 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~l~~~~~A~~~~~~~~~-~gKvvi~~~  352 (357)
T 2zb4_A          285 ERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKET--VINGLENMGAAFQSMMTGGN-IGKQIVCIS  352 (357)
T ss_dssp             HHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEE--EEECGGGHHHHHHHHHTTCC-SBEEEEECC
T ss_pred             cceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCccc--eecCHHHHHHHHHHHHcCCC-CceEEEEEe
Confidence            999999998653      245899999999999987754  55999999999999998754 578888764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=99.26  E-value=8.4e-13  Score=126.17  Aligned_cols=227  Identities=19%  Similarity=0.207  Sum_probs=172.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCC-CCCCCCEEEEc-----cCcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK-HLKVDNQTRFV-----PEFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~-~~~vGdrV~~~-----~~~~~~~~~~~~~~p~~   74 (408)
                      |+++|||++|++.+. |.+. ...++|.++|||++|+|+++|++|+ +|++||||+..     .+|...+...++..|+.
T Consensus        60 v~a~gi~~~D~~~~~-G~~~-~~~~~P~i~G~E~~G~V~~vG~~V~~~~~vGdrV~~~~~G~~aey~~v~~~~~~~~P~~  137 (362)
T 2c0c_A           60 NRFVGVNASDINYSA-GRYD-PSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSV  137 (362)
T ss_dssp             EEEEECCTTHHHHHT-TTTC-TTCCSCEECCSEEEEEEEEECTTGGGTCCTTCEEEEECSCCSBSEEEEEGGGCEECSSS
T ss_pred             EEEeccCHHHHHHhc-CCCC-CCCCCCCCCCceeEEEEEEECCCccCCCCCCCEEEEccCCcceeEEEEcHHHeEECCCC
Confidence            579999999999885 4321 1246899999999999999999999 99999999863     35666777788888885


Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC--------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH--------------------------  126 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~--------------------------  126 (408)
                       .. +.++++.++.+++.+......+ .+++++|+| +|++|++++|+++.+|+                          
T Consensus       138 -~~-~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~  215 (362)
T 2c0c_A          138 -KP-EYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINY  215 (362)
T ss_dssp             -CH-HHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             -ch-HhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEec
Confidence             33 6677776666665332222223 578999999 79999999998887665                          


Q ss_pred             ---------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCC---c--------ccCHHHHHhcCcEEEEe
Q psy1413         127 ---------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD---V--------KIPLVLTMTKEIDIRGV  178 (408)
Q Consensus       127 ---------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~---~--------~~~~~~~~~~~~~l~g~  178 (408)
                                     .++.+++++|...  .++++++++|+++.+|.....   .        .+ ...++.|++++.|+
T Consensus       216 ~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~  294 (362)
T 2c0c_A          216 KTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGF  294 (362)
T ss_dssp             TTSCHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEEC
T ss_pred             CChhHHHHHHHhcCCCCCEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEE
Confidence                           1456677777532  678999999999999965321   1        22 25688999999998


Q ss_pred             ecCC------CcHHHHHHHHHcCCCCCCCc------eeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         179 FRYA------NDYPIALAMVASGKVDVKKL------ITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       179 ~~~~------~~~~~~~~l~~~g~~~~~~~------i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      +...      ++++++++++++|++++...      +++.|+|+|+++||+.+.+++. .+|++++.
T Consensus       295 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~-~gKvvv~~  360 (362)
T 2c0c_A          295 FLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKN-TGKIVVEL  360 (362)
T ss_dssp             CGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCC-SBEEEEEC
T ss_pred             EhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCC-CceEEEEc
Confidence            7532      46899999999999987654      4577899999999999987654 57888764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=99.22  E-value=2e-12  Score=124.23  Aligned_cols=229  Identities=20%  Similarity=0.192  Sum_probs=167.8

Q ss_pred             CCeeeecccchhhhhcCCCC-------------CCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------
Q psy1413           1 MHCVGICGSDVHYLTHGQIG-------------DFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~-------------~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------   58 (408)
                      |+++|||++|++.+. |...             ....++|.++|||++|+|+++|++|++|++||||+..+         
T Consensus        57 v~a~gi~~~D~~~~~-G~~~~~~~~~~~~~~~~~~~~~~P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~a  135 (375)
T 2vn8_A           57 VHAASVNPIDVNMRS-GYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLS  135 (375)
T ss_dssp             EEEEEECHHHHHHHT-TTTHHHHHHHHCTTCCSCTTTTCSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSB
T ss_pred             EEEEEcCHHHHHHhc-cCccccccccccccccccccccCCcccceeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccce
Confidence            479999999999884 3211             11124899999999999999999999999999998743         


Q ss_pred             CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-----ecCCeEEEEc-cCccccccccccccccC------
Q psy1413          59 EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-----ICGSDVHYLT-HGQIGDFRLSDPMIVGH------  126 (408)
Q Consensus        59 ~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-----~~g~~vlv~g-~G~vG~~~i~~a~~~G~------  126 (408)
                      +|...+...++..|+++++++++.++....+++.+......     -.+++++|+| +|++|++++|+++.+|+      
T Consensus       136 ey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~  215 (375)
T 2vn8_A          136 EFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC  215 (375)
T ss_dssp             SEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             eEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe
Confidence            44456677888999999996666666555555433221222     2588999999 79999999998887664      


Q ss_pred             --------------------------------cceeEEEccCch----HHHHhhccCCcEEEEEccCCCC-cc---cCH-
Q psy1413         127 --------------------------------EASGIVSKVGAK----VKHLKATRPGGCLVIVGAGSQD-VK---IPL-  165 (408)
Q Consensus       127 --------------------------------~~~~vv~~~g~~----~~~~~~l~~gG~iv~~G~~~~~-~~---~~~-  165 (408)
                                                      .++.+++++|..    .+++++++++|+++.+|..... ..   ++. 
T Consensus       216 ~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~  295 (375)
T 2vn8_A          216 SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADG  295 (375)
T ss_dssp             CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHH
T ss_pred             ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccch
Confidence                                            256678888866    3678899999999999975431 10   111 


Q ss_pred             -----HHHHh-------cCcEEEEeecCC--CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413         166 -----VLTMT-------KEIDIRGVFRYA--NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI  231 (408)
Q Consensus       166 -----~~~~~-------~~~~l~g~~~~~--~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi  231 (408)
                           ..++.       ++..+.+.+...  ++++++++++++|+++  ++++++|||+|+++||+.+.+++. .+|+++
T Consensus       296 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~-~gKvvi  372 (375)
T 2vn8_A          296 MLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIR--PVIEQTFPFSKVPEAFLKVERGHA-RGKTVI  372 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCCC-SSEEEE
T ss_pred             hheeehhhccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCcc--cCcCeEECHHHHHHHHHHHHcCCC-CCeEEE
Confidence                 11222       555665544332  4689999999999985  679999999999999999988754 468877


Q ss_pred             Ec
Q psy1413         232 HC  233 (408)
Q Consensus       232 ~~  233 (408)
                      +.
T Consensus       373 ~~  374 (375)
T 2vn8_A          373 NV  374 (375)
T ss_dssp             EC
T ss_pred             Ee
Confidence            63

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=99.21  E-value=5.2e-13  Score=125.88  Aligned_cols=224  Identities=14%  Similarity=0.158  Sum_probs=160.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~   68 (408)
                      |+++|||++|++.+. |..+ ....+|.++|||++|+|+++  ++++|++||||++.+            ++...+...+
T Consensus        37 v~a~gi~~~D~~~~~-g~~~-~~~~~p~v~G~E~~G~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~  112 (328)
T 1xa0_A           37 VHYSSVNYKDGLASI-PDGK-IVKTYPFVPGIDLAGVVVSS--QHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWL  112 (328)
T ss_dssp             EEEEECCHHHHHHTS-GGGS-SCCSSSBCCCSEEEEEEEEC--CSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGC
T ss_pred             EEEEecCHHHHHhhc-CCCC-CCCCCCcccCcceEEEEEec--CCCCCCCCCEEEEccccCCCCCCccceeEEEechHHe
Confidence            469999999999884 3211 22467999999999999995  578999999998642            3445666677


Q ss_pred             eeccceeeecccccCCCCCCcceEEE--Eeeeee-cCC-eEEEEcc-CccccccccccccccC-----------------
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLE--MHCVGI-CGS-DVHYLTH-GQIGDFRLSDPMIVGH-----------------  126 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~--~~~~~~-~g~-~vlv~g~-G~vG~~~i~~a~~~G~-----------------  126 (408)
                      +..|+++++++++.++....+++.+.  +...++ .++ +++|+|+ |++|++++|+++.+|+                 
T Consensus       113 ~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~  192 (328)
T 1xa0_A          113 VPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV  192 (328)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred             EECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            88899888866665554433443211  111223 354 8999996 9999999999887665                 


Q ss_pred             -----------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeec
Q psy1413         127 -----------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFR  180 (408)
Q Consensus       127 -----------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~  180 (408)
                                             .++.+++++|...  +++++++++|+++.+|.... +.+++...++.|++++.|+..
T Consensus       193 lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  272 (328)
T 1xa0_A          193 LGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDS  272 (328)
T ss_dssp             TTCSEEEECC---------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCS
T ss_pred             cCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHHHHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEec
Confidence                                   1344566666432  68999999999999997654 466777788999999999853


Q ss_pred             C--C-C----cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         181 Y--A-N----DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       181 ~--~-~----~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                      .  . .    .+++++++++++ +  ++ ++++|+|+|+++||+.+.+++. .+|++++.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~g-l--~~-~~~~~~l~~~~~A~~~~~~~~~-~gKvvv~~  327 (328)
T 1xa0_A          273 VYCPMDLRLRIWERLAGDLKPD-L--ER-IAQEISLAELPQALKRILRGEL-RGRTVVRL  327 (328)
T ss_dssp             SSCCHHHHHHHHHHHHTTTCCC-H--HH-HEEEEEGGGHHHHHHHHHHTCC-CSEEEEEC
T ss_pred             ccCCHHHHHHHHHHHHHHHHcC-C--ce-eeeEeCHHHHHHHHHHHHcCCC-CCeEEEEe
Confidence            2  2 1    244555555555 4  33 4799999999999999988754 56877764

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=98.93  E-value=1.4e-11  Score=118.36  Aligned_cols=228  Identities=13%  Similarity=0.100  Sum_probs=162.6

Q ss_pred             CCeeeecccchhhhhcCC-------CCC-------------------CCCCCCccccCCccEEEEEeCCCC-CCCCCCCE
Q psy1413           1 MHCVGICGSDVHYLTHGQ-------IGD-------------------FRLSDPMIVGHEASGIVSKVGAKV-KHLKVDNQ   53 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~-------~~~-------------------~~~~~P~i~GhE~~G~Vv~vG~~v-~~~~vGdr   53 (408)
                      |+++|||++|++.+.+.+       .|.                   ...++|.++|||++|+|+++|++| ++|++|||
T Consensus        39 v~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdr  118 (379)
T 3iup_A           39 IEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKT  118 (379)
T ss_dssp             EEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCE
T ss_pred             EEEEecCHHHHHHhcCCccccccccccccccccccccCccccccccccccCCCccceeeeEEEEEEeCCCcccCCCCCCE
Confidence            469999999999985321       000                   023579999999999999999999 89999999


Q ss_pred             EEEcc-----CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEE--ccCccccccccccccccC
Q psy1413          54 TRFVP-----EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYL--THGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        54 V~~~~-----~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~--g~G~vG~~~i~~a~~~G~  126 (408)
                      |+..+     ++...+.+.++..|+++++++++.++....+++. .+......+++++|+  |+|++|++++|+++.+|+
T Consensus       119 V~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~-~~~~~~~~g~~vlV~gag~G~vG~~a~q~a~~~Ga  197 (379)
T 3iup_A          119 VAAIGGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALG-MVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI  197 (379)
T ss_dssp             EEECCSCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHH-HHHHHHHTTCSCEEESSTTSHHHHHHHHHHHHHTC
T ss_pred             EEecCCCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHH-HHHHhccCCCEEEEECCCCCHHHHHHHHHHHHCCC
Confidence            99753     5567777888999999999777766655555542 111222468999998  789999999999988775


Q ss_pred             ------------------------------------------cceeEEEccCch---HHHHhhcc-----CC--------
Q psy1413         127 ------------------------------------------EASGIVSKVGAK---VKHLKATR-----PG--------  148 (408)
Q Consensus       127 ------------------------------------------~~~~vv~~~g~~---~~~~~~l~-----~g--------  148 (408)
                                                                .++.+++++|..   ..++++++     ++        
T Consensus       198 ~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~  277 (379)
T 3iup_A          198 KLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGS  277 (379)
T ss_dssp             CEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCC
T ss_pred             EEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeeccc
Confidence                                                      256677777753   24566664     55        


Q ss_pred             ---cEEEEEccCCCCcccCHHHHHhcCcEEEEeecC------C-CcH----HHHHHHHHcCCCCCCCceeeeeccchH--
Q psy1413         149 ---GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY------A-NDY----PIALAMVASGKVDVKKLITHNYLLEDT--  212 (408)
Q Consensus       149 ---G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~------~-~~~----~~~~~l~~~g~~~~~~~i~~~~~l~~~--  212 (408)
                         |+++.+|... ..++++..++.+++++.|.+..      . +++    +++++++.+   .++++++++|+|+|+  
T Consensus       278 ~~~g~iv~~G~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~i~~~~~l~~~~~  353 (379)
T 3iup_A          278 TTHKQVYLYGGLD-TSPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT---TFASHYSKEISLAEVLD  353 (379)
T ss_dssp             CSCEEEEECCCSE-EEEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT---TTCCCCSEEEEHHHHTC
T ss_pred             ccCceEEEecCCC-CCccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc---cCCCcceEEecHHHhhh
Confidence               5555555432 2233444667889999997642      1 233    445555555   356789999999999  


Q ss_pred             HHHHHHHHcCCCCceEEEEEcC
Q psy1413         213 LHAFETAKTGAGNAIKVMIHCD  234 (408)
Q Consensus       213 ~~a~~~~~~~~~~~~kvvi~~~  234 (408)
                      ++||+.+.+++. .+|++++++
T Consensus       354 ~~A~~~l~~~~~-~gKvVv~~~  374 (379)
T 3iup_A          354 LDMIAVYNKRAT-GEKYLINPN  374 (379)
T ss_dssp             HHHHHHHTTCCT-TCCEEEETT
T ss_pred             HHHHHHHhcCCC-CceEEEeCC
Confidence            999999988754 467777654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.41  E-value=4e-08  Score=94.84  Aligned_cols=120  Identities=18%  Similarity=0.269  Sum_probs=88.9

Q ss_pred             CccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccC----cCCCCEEEEEecchhHHHHHHHHHHhCCCeEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAG----VTLGSKVLITGAGPIGLVTLLTARALGASRVV  345 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~----~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv  345 (408)
                      .|++++|.......++.+|++++.+.++...+.++++.++....    -.++++++|+|+|++|..+++.++.+|+++|+
T Consensus       116 ~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~  195 (404)
T 1gpj_A          116 LGTLDEALKIVFRRAINLGKRAREETRISEGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVL  195 (404)
T ss_dssp             HTCCCHHHHHHHHHHHHHHHHHHHHSSTTCSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEE
T ss_pred             cCCchHHHHHHHHHHhhhhccCcchhhhcCCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEE
Confidence            46677787777777888888877666555456666766653322    24789999999999999999999999997799


Q ss_pred             EEecChhhH-HHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         346 ITDILEHKL-KTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       346 ~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      +++|+.++. +.++++|++ ++++      +++.+.+      .++|+||+|+|....
T Consensus       196 v~~r~~~ra~~la~~~g~~-~~~~------~~l~~~l------~~aDvVi~at~~~~~  240 (404)
T 1gpj_A          196 VANRTYERAVELARDLGGE-AVRF------DELVDHL------ARSDVVVSATAAPHP  240 (404)
T ss_dssp             EECSSHHHHHHHHHHHTCE-ECCG------GGHHHHH------HTCSEEEECCSSSSC
T ss_pred             EEeCCHHHHHHHHHHcCCc-eecH------HhHHHHh------cCCCEEEEccCCCCc
Confidence            999999887 567888976 3333      3333333      268999999986543

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.35  E-value=8.3e-09  Score=89.51  Aligned_cols=134  Identities=16%  Similarity=0.159  Sum_probs=83.8

Q ss_pred             cceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC------------------
Q psy1413          67 PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH------------------  126 (408)
Q Consensus        67 ~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~------------------  126 (408)
                      .++..|+++++++.+.++.++.+++.+......+ .+++++|+| +|++|..++++++..|+                  
T Consensus         3 ~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~   82 (198)
T 1pqw_A            3 LVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL   82 (198)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT
T ss_pred             ceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc
Confidence            4677899999976677776666665332222233 478899998 68999888877665553                  


Q ss_pred             ------------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCC--CCcccCHHHHHhcCcEEEEe
Q psy1413         127 ------------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGS--QDVKIPLVLTMTKEIDIRGV  178 (408)
Q Consensus       127 ------------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l~g~  178 (408)
                                              .++.++++.|...  +++++++++|+++.+|...  .+.++++. ++.+++++.+.
T Consensus        83 g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~  161 (198)
T 1pqw_A           83 GVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKSASFSVV  161 (198)
T ss_dssp             CCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTTCEEEEC
T ss_pred             CCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCCcEEEEE
Confidence                                    2456667766432  6789999999999999754  23334443 35788998864


Q ss_pred             ec------C----CCcHHHHHHHHHcCCCCCCC
Q psy1413         179 FR------Y----ANDYPIALAMVASGKVDVKK  201 (408)
Q Consensus       179 ~~------~----~~~~~~~~~l~~~g~~~~~~  201 (408)
                      ..      .    .+.++++++++++|++++.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  194 (198)
T 1pqw_A          162 DLDLNLKLQPARYRQLLQHILQHVADGKLEVLP  194 (198)
T ss_dssp             CHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             ehHHhhccCHHHHHHHHHHHHHHHHcCCccCCC
Confidence            21      1    25689999999999998653

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.14  E-value=5.9e-06  Score=78.41  Aligned_cols=76  Identities=28%  Similarity=0.317  Sum_probs=59.9

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCe--EEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADA--TVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~--~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      +++ ++++|+|+|++|+.+++.++.+|+ +|++++++.+|++.+++++++.  +++.+.    +++.+.+.      ++|
T Consensus       165 l~~-~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~------~~D  232 (361)
T 1pjc_A          165 VKP-GKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS----AEIETAVA------EAD  232 (361)
T ss_dssp             BCC-CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH----HHHHHHHH------TCS
T ss_pred             CCC-CEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH----HHHHHHHc------CCC
Confidence            344 899999999999999999999999 5999999999999988877544  344322    45544442      699


Q ss_pred             eEEEcccchh
Q psy1413         392 KTIDCSGIES  401 (408)
Q Consensus       392 ~i~d~~g~~~  401 (408)
                      ++|||++.+.
T Consensus       233 vVI~~~~~~~  242 (361)
T 1pjc_A          233 LLIGAVLVPG  242 (361)
T ss_dssp             EEEECCCCTT
T ss_pred             EEEECCCcCC
Confidence            9999998754

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.10  E-value=1.5e-05  Score=71.11  Aligned_cols=83  Identities=14%  Similarity=0.099  Sum_probs=67.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~  394 (408)
                      ++++||+|+ +|+|+.+++.+...|++ |+++++++++++.+.+.+........|..+.+++++.+.++.. -+++|+.+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~-V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDK-VCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            478999999 99999999999999998 9999999988887766665655556677777888888777654 25799999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      |++|..
T Consensus        81 NNAG~~   86 (247)
T 3ged_A           81 NNACRG   86 (247)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
Confidence            999854

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.09  E-value=1.3e-05  Score=72.68  Aligned_cols=84  Identities=26%  Similarity=0.236  Sum_probs=68.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|++++++.+ +++|.....-..|..+.+++++.+.++.. .+++|+
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~-V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGAR-VFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5788999999 99999999999999998 99999999888654 67886665555666777888888777654 357999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      .++++|..
T Consensus       107 LVNNAG~~  114 (273)
T 4fgs_A          107 LFVNAGGG  114 (273)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999864

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=98.04  E-value=1.7e-05  Score=78.21  Aligned_cols=87  Identities=20%  Similarity=0.244  Sum_probs=70.2

Q ss_pred             cCCC--CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-------HHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413         314 VTLG--SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-------LKTAKEMGADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       314 ~~~~--~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-------~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      ++++  ++|||+|+ |++|..+++++...|+++|++++|++..       .+.+++.|....+...|..+.+++.+.+.+
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            4555  99999999 9999999999999999889999986321       234566787777777777888888888888


Q ss_pred             HhcCCCCceEEEcccch
Q psy1413         384 LLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       384 ~~~~~~~d~i~d~~g~~  400 (408)
                      +....++|.+|++.|..
T Consensus       314 i~~~g~ld~vVh~AGv~  330 (496)
T 3mje_A          314 LPEDAPLTAVFHSAGVA  330 (496)
T ss_dssp             CCTTSCEEEEEECCCCC
T ss_pred             HHHhCCCeEEEECCccc
Confidence            76545799999999864

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=98.03  E-value=1.3e-05  Score=79.72  Aligned_cols=88  Identities=16%  Similarity=0.132  Sum_probs=71.0

Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecCh-------------hh----HHHHHHcCCCeEEecCCCCC
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILE-------------HK----LKTAKEMGADATVLIDRNHS  373 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~-------------~~----~~~~~~~ga~~~i~~~~~~~  373 (408)
                      .++++++|||+|+ |++|..+++++...|+++++++ +|++             ++    .+.+++.|....+-..|..+
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD  326 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence            4789999999999 9999999999999999988888 8873             22    23455668777766777778


Q ss_pred             hHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         374 LEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       374 ~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      .+++.+.+.++....++|.+|++.|..
T Consensus       327 ~~~v~~~~~~i~~~g~id~vVh~AGv~  353 (525)
T 3qp9_A          327 AEAAARLLAGVSDAHPLSAVLHLPPTV  353 (525)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCCC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCcCC
Confidence            888888888876445799999999964

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=97.99  E-value=2.5e-05  Score=77.12  Aligned_cols=88  Identities=15%  Similarity=0.099  Sum_probs=69.8

Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh---H----HHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK---L----KTAKEMGADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~---~----~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      .++++++|||+|+ |++|..+++++...|+++|++++|+...   .    +.+++.|....+...|..+.+++.+.+.++
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            4788999999999 9999999999999999889999998642   2    334556776655566777778888888777


Q ss_pred             hcCCCCceEEEcccch
Q psy1413         385 LQGEQPDKTIDCSGIE  400 (408)
Q Consensus       385 ~~~~~~d~i~d~~g~~  400 (408)
                      ....++|.||++.|..
T Consensus       302 ~~~g~ld~VIh~AG~~  317 (486)
T 2fr1_A          302 GDDVPLSAVFHAAATL  317 (486)
T ss_dssp             CTTSCEEEEEECCCCC
T ss_pred             HhcCCCcEEEECCccC
Confidence            4345789999999853

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.99  E-value=3.8e-05  Score=68.87  Aligned_cols=84  Identities=19%  Similarity=0.243  Sum_probs=68.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |+++++++++++.    +++.|........|..+.+++++.+.++.. -++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~-Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSI-VVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4688999999 99999999999999998 8999999887654    345676666666777788888888877654 357


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|+++|++|..
T Consensus        85 iDiLVNNAGi~   95 (254)
T 4fn4_A           85 IDVLCNNAGIM   95 (254)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCccc
Confidence            99999999853

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.98  E-value=2.6e-05  Score=69.97  Aligned_cols=84  Identities=18%  Similarity=0.094  Sum_probs=64.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++++.+    ++.|....+...|..+.+++++.+.++....++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i   84 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFT-VFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCE-EEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence            4578999999 99999999999999997 99999988776543    334655555556666777887777766433579


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|++.|..
T Consensus        85 d~lv~nAg~~   94 (252)
T 3h7a_A           85 EVTIFNVGAN   94 (252)
T ss_dssp             EEEEECCCCC
T ss_pred             eEEEECCCcC
Confidence            9999999953

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.97  E-value=3.7e-05  Score=68.76  Aligned_cols=84  Identities=24%  Similarity=0.288  Sum_probs=66.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++.......-|..+.+++++.+.++.. ..++|+
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGAT-VIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            4678999999 99999999999999997 89999998887654 55676665555666677777777766543 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        84 lv~nAg~~   91 (247)
T 3rwb_A           84 LVNNASIV   91 (247)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999853

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.96  E-value=5.1e-05  Score=68.35  Aligned_cols=84  Identities=24%  Similarity=0.248  Sum_probs=65.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+..-|..+.+++++.+.++.. ..++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGAT-VAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999999 99999999999999997 88899998877654 55665555555566677777777776543 347999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        86 lv~~Ag~~   93 (259)
T 4e6p_A           86 LVNNAALF   93 (259)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCcC
Confidence            99999863

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=97.95  E-value=3.3e-05  Score=68.84  Aligned_cols=147  Identities=12%  Similarity=0.021  Sum_probs=80.4

Q ss_pred             cCceeecCCCcccccccccCCccccccceeecccC---CCCccceeEEeeccceeeeCCCCCC------cccccccchhh
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATP---PDHGNLSRYYRHAADFCHKLPDHVS------LEEGALLEPLS  303 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~p~~~~------~~~aa~~~~~~  303 (408)
                      ||+|++.+.. |+.|..|..|.+..|+.+.+....   ...|+..      +....+.|+...      ...++.+.+..
T Consensus         7 Gd~V~~~~~~-~~~~~~~~~g~~~~~~~G~~~~~~~~g~~~G~~~------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~   79 (248)
T 2yvl_A            7 GEYVLIRFGE-KKFLRKLLPKQSLSVKKSVLKFDEVIGKPEGVKI------NGFEVYRPTLEEIILLGFERKTQIIYPKD   79 (248)
T ss_dssp             TCEEEEEETT-EEEEEECCTTCEEEETTEEEEGGGTTTCCTTEEE------TTEEEECCCHHHHHHHTSCCSSCCCCHHH
T ss_pred             CCEEEEEeCC-eEEEEEEcCCCEEecCCceEEHHHhcCCCCCCEE------EEEEEeCCCHHHHHHhcCcCCCCcccchh
Confidence            8999998854 555555555555555443322111   1122222      233333343221      11222222222


Q ss_pred             hhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHc----CC-C-eEEecCCCCChHHH
Q psy1413         304 VGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEM----GA-D-ATVLIDRNHSLEEI  377 (408)
Q Consensus       304 ~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~----ga-~-~~i~~~~~~~~~~~  377 (408)
                       ..+.+....+.+++++|.+|+| .|.....+++. +. +++.++.+++..+.+++.    +. + ..+...+      +
T Consensus        80 -~~~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d------~  149 (248)
T 2yvl_A           80 -SFYIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVD------F  149 (248)
T ss_dssp             -HHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSC------T
T ss_pred             -HHHHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcC------h
Confidence             2244456677899999999987 58888888887 55 599999999888776553    43 2 2222222      1


Q ss_pred             HHHHHHHh-cCCCCceEEEcccch
Q psy1413         378 STHIIELL-QGEQPDKTIDCSGIE  400 (408)
Q Consensus       378 ~~~~~~~~-~~~~~d~i~d~~g~~  400 (408)
                      .    +.. ...++|+||...+..
T Consensus       150 ~----~~~~~~~~~D~v~~~~~~~  169 (248)
T 2yvl_A          150 K----DAEVPEGIFHAAFVDVREP  169 (248)
T ss_dssp             T----TSCCCTTCBSEEEECSSCG
T ss_pred             h----hcccCCCcccEEEECCcCH
Confidence            1    111 235799999876644

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.94  E-value=4e-05  Score=67.99  Aligned_cols=83  Identities=16%  Similarity=0.298  Sum_probs=63.2

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++....+..-|..+.+++++.+.++.. ..++|++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQ-VSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            468999999 99999999999999997 99999998887655 33444444444555667777777766543 2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |++.|..
T Consensus        82 vnnAg~~   88 (235)
T 3l6e_A           82 LHCAGTG   88 (235)
T ss_dssp             EEECCCC
T ss_pred             EECCCCC
Confidence            9999864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.94  E-value=4e-05  Score=69.36  Aligned_cols=84  Identities=30%  Similarity=0.304  Sum_probs=66.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++....+...|..+.+++++.+.++.. ..++|+
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAI-VGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999999 99999999999999997 88899998887654 56776666556666677777777776543 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus       105 lvnnAg~~  112 (266)
T 3grp_A          105 LVNNAGIT  112 (266)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999864

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.94  E-value=4e-05  Score=68.73  Aligned_cols=84  Identities=26%  Similarity=0.285  Sum_probs=68.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++.++++++++.    +++.|.+......|..+.+++++.+.++.. ..+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~-Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGAR-VILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            4688999999 99999999999999998 9999999877643    345576666666677778888888888765 357


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|+.++++|..
T Consensus        87 iDiLVNNAG~~   97 (255)
T 4g81_D           87 VDILINNAGIQ   97 (255)
T ss_dssp             CCEEEECCCCC
T ss_pred             CcEEEECCCCC
Confidence            99999999864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.93  E-value=4.6e-05  Score=59.32  Aligned_cols=78  Identities=18%  Similarity=0.161  Sum_probs=56.8

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ..+++|+|+|.+|+.+++.+...|..+|++++++.++.+.+.+.+...+.  .+..+.+++.+    ..  .++|++|+|
T Consensus         5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~--~d~~~~~~~~~----~~--~~~d~vi~~   76 (118)
T 3ic5_A            5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQ--VDAKDEAGLAK----AL--GGFDAVISA   76 (118)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEE--CCTTCHHHHHH----HT--TTCSEEEEC
T ss_pred             cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEE--ecCCCHHHHHH----HH--cCCCEEEEC
Confidence            45799999999999999999999955699999999998888766654432  12222333333    32  379999999


Q ss_pred             ccchhh
Q psy1413         397 SGIEST  402 (408)
Q Consensus       397 ~g~~~~  402 (408)
                      +|....
T Consensus        77 ~~~~~~   82 (118)
T 3ic5_A           77 APFFLT   82 (118)
T ss_dssp             SCGGGH
T ss_pred             CCchhh
Confidence            975543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.93  E-value=4.9e-05  Score=68.40  Aligned_cols=84  Identities=24%  Similarity=0.214  Sum_probs=65.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++++.+ ++++....+...|..+.+++++.+.++.. ..++|+
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAK-VVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4578999999 99999999999999998 99999998887665 55666555555666667777777766533 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        87 li~~Ag~~   94 (261)
T 3n74_A           87 LVNNAGIG   94 (261)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccC
Confidence            99999854

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.93  E-value=4.4e-05  Score=68.24  Aligned_cols=83  Identities=29%  Similarity=0.297  Sum_probs=64.2

Q ss_pred             cCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         314 VTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       314 ~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ..+++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ +++.....+...|..+.+++.+.+.+.   .++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---~~id   86 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSK-VIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT---SNLD   86 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC---SCCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc---CCCC
Confidence            467789999999 99999999999999997 89999998887665 445555555556666667776666544   4799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      ++|+++|..
T Consensus        87 ~li~~Ag~~   95 (249)
T 3f9i_A           87 ILVCNAGIT   95 (249)
T ss_dssp             EEEECCC--
T ss_pred             EEEECCCCC
Confidence            999999854

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.92  E-value=5.3e-05  Score=69.03  Aligned_cols=84  Identities=20%  Similarity=0.192  Sum_probs=65.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++.......-|..+.+++++.+.++.. ..++|+
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAY-VVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4578999999 99999999999999997 88999998877654 55676555555566677777777776543 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus       105 lv~nAg~~  112 (277)
T 4dqx_A          105 LVNNAGFG  112 (277)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCcC
Confidence            99999853

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.91  E-value=4.7e-05  Score=68.14  Aligned_cols=84  Identities=24%  Similarity=0.287  Sum_probs=62.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCe-EEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADA-TVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~-~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++... .+...|..+.+++++.+.++....++|+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGAR-LILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            4578999999 99999999999999997 99999998876654 4455443 3333455566777777666543347999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        89 li~~Ag~~   96 (254)
T 2wsb_A           89 LVNSAGIA   96 (254)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccC
Confidence            99999853

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=97.91  E-value=5.8e-05  Score=74.84  Aligned_cols=84  Identities=21%  Similarity=0.256  Sum_probs=66.0

Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh---H----HHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK---L----KTAKEMGADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~---~----~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      .++++++|||+|+ |++|..+++++...|+++|++++|+..+   .    +.+++.|....+...|..+.+++.+.+.+ 
T Consensus       255 ~~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          255 SWQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence            3688999999999 9999999999999999889999998632   2    33445576665555666677777777765 


Q ss_pred             hcCCCCceEEEcccch
Q psy1413         385 LQGEQPDKTIDCSGIE  400 (408)
Q Consensus       385 ~~~~~~d~i~d~~g~~  400 (408)
                         .++|.||++.|..
T Consensus       334 ---~~ld~VVh~AGv~  346 (511)
T 2z5l_A          334 ---YPPNAVFHTAGIL  346 (511)
T ss_dssp             ---SCCSEEEECCCCC
T ss_pred             ---CCCcEEEECCccc
Confidence               4799999999854

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.90  E-value=7.8e-05  Score=67.13  Aligned_cols=84  Identities=17%  Similarity=0.215  Sum_probs=62.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc-----CCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM-----GADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++     +....+...|..+.+++++.+.++....
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGAR-LLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3578999999 99999999999999997 88899988776543 222     3233333455566778888777766543


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus        85 gid~lv~~Ag~~   96 (260)
T 2z1n_A           85 GADILVYSTGGP   96 (260)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            599999999853

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.89  E-value=4.1e-05  Score=68.85  Aligned_cols=84  Identities=24%  Similarity=0.228  Sum_probs=65.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++....+...|..+.+++++.+.++.. ..++|+
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAE-VLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4678999999 99999999999999997 99999998887665 45665555555566667777777666532 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ++++.|..
T Consensus        86 lv~nAg~~   93 (255)
T 4eso_A           86 LHINAGVS   93 (255)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999864

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.88  E-value=5.4e-05  Score=68.46  Aligned_cols=84  Identities=17%  Similarity=0.249  Sum_probs=64.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|+.+++.+...|++ |++++|+.++++.+    ++.|....+...|..+.+++++.+.++.. ..+
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAK-ILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999 99999999999999998 88899998776543    33455555445566667777777776543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        82 iD~lVnnAG~~   92 (264)
T 3tfo_A           82 IDVLVNNAGVM   92 (264)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999854

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.88  E-value=5.4e-05  Score=68.66  Aligned_cols=84  Identities=25%  Similarity=0.204  Sum_probs=65.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++....+...|..+.+++++.+.++.. ..++|+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGAR-VVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999999 99999999999999997 89999998887654 55675555555566677777777766543 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ++++.|..
T Consensus        89 lv~nAg~~   96 (271)
T 3tzq_B           89 VDNNAAHS   96 (271)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999864

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.87  E-value=5.4e-05  Score=67.69  Aligned_cols=84  Identities=21%  Similarity=0.193  Sum_probs=63.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|++++.+.+ ++++.......-|..+.+++++.+.++.. ..++|+
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAK-VIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999999 99999999999999998 88899998887655 34444333334455667777777776543 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ++++.|..
T Consensus        87 lv~nAg~~   94 (248)
T 3op4_A           87 LVNNAGIT   94 (248)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999854

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.87  E-value=8.4e-05  Score=66.25  Aligned_cols=84  Identities=26%  Similarity=0.255  Sum_probs=65.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+....+..-|..+.+++++.+.++.. ..+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGAT-VVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999 99999999999999997 88899988776543    34465555555566677888888777643 347


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        83 id~li~~Ag~~   93 (247)
T 3lyl_A           83 IDILVNNAGIT   93 (247)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999864

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.87  E-value=5.1e-05  Score=69.10  Aligned_cols=84  Identities=21%  Similarity=0.234  Sum_probs=64.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+..-|..+.+++++.+.++.. ..++|+
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCH-VLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999999 99999999999999997 99999998887654 55665554445566667777777766533 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +++++|..
T Consensus       107 lvnnAg~~  114 (277)
T 3gvc_A          107 LVANAGVV  114 (277)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999864

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.86  E-value=6.5e-05  Score=68.57  Aligned_cols=84  Identities=25%  Similarity=0.252  Sum_probs=65.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++++.+ ++++....+...|..+.+++++.+.++.. ..++|+
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGAR-VAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            3578999999 99999999999999997 99999998887665 44565555555566677777777766533 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +++++|..
T Consensus        83 lvnnAg~~   90 (281)
T 3zv4_A           83 LIPNAGIW   90 (281)
T ss_dssp             EECCCCCC
T ss_pred             EEECCCcC
Confidence            99999863

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.86  E-value=8.8e-05  Score=67.12  Aligned_cols=85  Identities=19%  Similarity=0.252  Sum_probs=62.7

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-----HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-----KEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      -.++++||+|+ |++|..+++.+...|++ |++++|+.++++.+     ++.|....+-..|..+.+++++.+.++.. .
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCS-VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34678999999 99999999999999997 88899988776543     22365544444555666777777665532 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus        98 g~iD~lvnnAg~~  110 (267)
T 1vl8_A           98 GKLDTVVNAAGIN  110 (267)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCcC
Confidence            4799999999854

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.86  E-value=0.0001  Score=66.51  Aligned_cols=84  Identities=15%  Similarity=0.150  Sum_probs=65.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++++.+    ++.|....+...|..+.+++++.+.++.. ..+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGAD-LVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999 99999999999999998 89999998776543    33465555555666677788777776643 347


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|++.|..
T Consensus        89 id~lv~nAg~~   99 (264)
T 3ucx_A           89 VDVVINNAFRV   99 (264)
T ss_dssp             CSEEEECCCSC
T ss_pred             CcEEEECCCCC
Confidence            99999999763

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.86  E-value=5.7e-05  Score=68.82  Aligned_cols=82  Identities=24%  Similarity=0.293  Sum_probs=65.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++.+.+ ++++....+...|..+.+++++.+.++....++|++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLG-VVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            4578999999 99999999999999997 99999998887665 556766555566667778888888877444578999


Q ss_pred             EEccc
Q psy1413         394 IDCSG  398 (408)
Q Consensus       394 ~d~~g  398 (408)
                      +++.+
T Consensus       108 v~~aa  112 (281)
T 3ppi_A          108 VVAHG  112 (281)
T ss_dssp             EECCC
T ss_pred             EEccC
Confidence            99844

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.86  E-value=6.2e-05  Score=67.68  Aligned_cols=83  Identities=23%  Similarity=0.167  Sum_probs=63.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+    .+....+...|..+.+++++.+.++.. ..+
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGAR-VVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999 99999999999999997 8999999888765532    344444445566667777777776543 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|+++|.
T Consensus        84 id~lv~nAg~   93 (257)
T 3imf_A           84 IDILINNAAG   93 (257)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.86  E-value=6e-05  Score=67.64  Aligned_cols=84  Identities=25%  Similarity=0.279  Sum_probs=63.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+...|..+.+++++.+.++.. ..++|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGAR-VVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3578999999 99999999999999997 88899998877654 44554444444455566777777766543 237999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        83 lv~nAg~~   90 (254)
T 1hdc_A           83 LVNNAGIS   90 (254)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999853

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.86  E-value=5.3e-05  Score=68.80  Aligned_cols=84  Identities=15%  Similarity=0.193  Sum_probs=64.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++....+..-|..+.+++.+.+.++.. ..++|+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYG-VALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999999 99999999999999997 89999998887654 55664444445566667777777766543 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus       106 lVnnAg~~  113 (272)
T 4dyv_A          106 LFNNAGTG  113 (272)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999863

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.86  E-value=8.7e-05  Score=66.28  Aligned_cols=84  Identities=27%  Similarity=0.270  Sum_probs=62.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+    ++.|....+...|..+.+++++.+.++.. ..+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAA-VAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999 99999999999999997 88899988776543    22355444444555667777777766533 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|++.|..
T Consensus        85 id~lv~nAg~~   95 (247)
T 2jah_A           85 LDILVNNAGIM   95 (247)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.84  E-value=0.0001  Score=66.31  Aligned_cols=84  Identities=18%  Similarity=0.137  Sum_probs=63.1

Q ss_pred             CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcC-CCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEHKLKTA----KEMG-ADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+ |  |+|+.+++.+...|++ |++++|++++++.+    ++.+ .......-|..+.+++++.+.++.. 
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~-Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAK-LVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4788999997 6  8999999999999998 99999998776554    3344 3344444566667777777766543 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      -.++|+++++.|..
T Consensus        84 ~G~iD~lvnnAg~~   97 (256)
T 4fs3_A           84 VGNIDGVYHSIAFA   97 (256)
T ss_dssp             HCCCSEEEECCCCC
T ss_pred             hCCCCEEEeccccc
Confidence            35799999999864

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.84  E-value=4.6e-05  Score=68.49  Aligned_cols=84  Identities=17%  Similarity=0.173  Sum_probs=57.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+..-|..+.+++++.+.++.. ..++|+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGAT-VLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999999 99999999999999998 88899988776544 44554444445566667777777766543 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        85 lv~nAg~~   92 (257)
T 3tpc_A           85 LVNCAGTA   92 (257)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999854

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.84  E-value=9.1e-05  Score=66.21  Aligned_cols=84  Identities=15%  Similarity=0.196  Sum_probs=62.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHH-HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLK-TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~-~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+. ++.+ .+++.|....+-.-|..+.+++++.+.++.. ..++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGAD-IAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            3578999999 99999999999999997 88889887 6654 3455665544444555666777777666533 24799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      ++|+++|..
T Consensus        85 ~lv~nAg~~   93 (249)
T 2ew8_A           85 ILVNNAGIY   93 (249)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999853

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.84  E-value=8.9e-05  Score=67.01  Aligned_cols=84  Identities=20%  Similarity=0.260  Sum_probs=62.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH---c--CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE---M--GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~---~--ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++   .  +....+...|..+.+++++.+.++.. .
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAK-LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4578999999 99999999999999997 88899988776543 22   2  54444444555666777777766533 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus        91 g~id~lv~nAg~~  103 (267)
T 1iy8_A           91 GRIDGFFNNAGIE  103 (267)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCcC
Confidence            4799999999853

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.83  E-value=8.7e-05  Score=66.78  Aligned_cols=84  Identities=20%  Similarity=0.215  Sum_probs=62.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcC--C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQG--E  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~--~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|....+...|..+.+++++.+.++...  .
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGAS-VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999 99999999999999997 88899988776543    233544444445556677777777665432  4


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus        87 ~id~lv~~Ag~~   98 (260)
T 2ae2_A           87 KLNILVNNAGIV   98 (260)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.83  E-value=8.5e-05  Score=67.67  Aligned_cols=85  Identities=18%  Similarity=0.161  Sum_probs=63.8

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      ..++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|....+...|..+.+++++.+.++.. ..
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            45689999999 99999999999999998 89999998776543    33465555555666677777777776543 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus       101 ~id~lv~nAg~~  112 (279)
T 3sju_A          101 PIGILVNSAGRN  112 (279)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCcEEEECCCCC
Confidence            799999999864

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.83  E-value=4.9e-05  Score=69.68  Aligned_cols=81  Identities=25%  Similarity=0.240  Sum_probs=64.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+..-|..+.+++++.+.++   .++|++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~---~~iD~l   90 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGAT-VIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV---SGADVL   90 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC---CCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc---CCCCEE
Confidence            4678999999 99999999999999997 99999998887765 445544444455666677777777665   479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus        91 v~nAg~~   97 (291)
T 3rd5_A           91 INNAGIM   97 (291)
T ss_dssp             EECCCCC
T ss_pred             EECCcCC
Confidence            9999864

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.83  E-value=9.8e-05  Score=67.01  Aligned_cols=84  Identities=20%  Similarity=0.230  Sum_probs=63.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcC--C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQG--E  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~--~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+    ++.|....+...|..+.+++++.+.++...  .
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGAR-VYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999 99999999999999997 88999988776543    334555444455666677777777665432  5


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        99 ~id~lv~nAg~~  110 (273)
T 1ae1_A           99 KLNILVNNAGVV  110 (273)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCcEEEECCCCC
Confidence            799999999863

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.83  E-value=9.1e-05  Score=66.57  Aligned_cols=84  Identities=23%  Similarity=0.183  Sum_probs=64.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|....+...|..+.+++++.+.++.. ..+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCE-EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999 99999999999999998 88899988776543    34465555555566677777777766543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|++.|..
T Consensus        90 id~lv~nAg~~  100 (256)
T 3gaf_A           90 ITVLVNNAGGG  100 (256)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999864

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.82  E-value=0.0001  Score=66.48  Aligned_cols=84  Identities=19%  Similarity=0.222  Sum_probs=61.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc----CCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM----GADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~----ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++    +....+...|..+.+++.+.+.++.. ..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAH-IVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999 99999999999999997 88899988776543 222    55444444555666777776665532 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus        85 ~id~lv~~Ag~~   96 (263)
T 3ai3_A           85 GADILVNNAGTG   96 (263)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.81  E-value=0.0001  Score=66.55  Aligned_cols=84  Identities=25%  Similarity=0.287  Sum_probs=63.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++....+...|..+.+++++.+.++.. ..++|+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGAS-LVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            3578999999 99999999999999997 88999998887665 44543333334555666777777766532 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|++.|..
T Consensus        84 lvnnAg~~   91 (263)
T 2a4k_A           84 VAHFAGVA   91 (263)
T ss_dssp             EEEGGGGT
T ss_pred             EEECCCCC
Confidence            99999864

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.81  E-value=9.5e-05  Score=66.16  Aligned_cols=83  Identities=20%  Similarity=0.153  Sum_probs=63.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+....+..-|..+.+++++.+.++.. ..+
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAA-VVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999 99999999999999998 88999998776544    33354444445566667777777766533 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|++.|.
T Consensus        87 id~li~~Ag~   96 (253)
T 3qiv_A           87 IDYLVNNAAI   96 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999986

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.81  E-value=6.7e-05  Score=71.46  Aligned_cols=76  Identities=21%  Similarity=0.263  Sum_probs=59.3

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      ++++++|+|+|++|+.+++.++.+|++ |++++++.++++.+++ +|++...+..+   .+++.+.+.      ++|++|
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~-V~~~d~~~~~l~~~~~~~g~~~~~~~~~---~~~l~~~l~------~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGAT-VTVLDINIDKLRQLDAEFCGRIHTRYSS---AYELEGAVK------RADLVI  236 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHTTTSSEEEECC---HHHHHHHHH------HCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHhcCCeeEeccCC---HHHHHHHHc------CCCEEE
Confidence            468999999999999999999999995 9999999999888866 78765333322   244544442      589999


Q ss_pred             Ecccchh
Q psy1413         395 DCSGIES  401 (408)
Q Consensus       395 d~~g~~~  401 (408)
                      +|++.+.
T Consensus       237 ~~~~~p~  243 (377)
T 2vhw_A          237 GAVLVPG  243 (377)
T ss_dssp             ECCCCTT
T ss_pred             ECCCcCC
Confidence            9998664

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.81  E-value=5.8e-05  Score=68.67  Aligned_cols=83  Identities=17%  Similarity=0.099  Sum_probs=62.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++.+.+    ++.+....+...|..+.+++.+.+.++....++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i  110 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAH-VILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV  110 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            4678999999 99999999999999997 89999987765433    334655544445555666666666665433589


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |++|+++|.
T Consensus       111 D~lvnnAg~  119 (275)
T 4imr_A          111 DILVINASA  119 (275)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.81  E-value=8.2e-05  Score=66.63  Aligned_cols=84  Identities=20%  Similarity=0.174  Sum_probs=62.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----c--C-CCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----M--G-ADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~--g-a~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+    .  + ....+..-|..+.+++.+.+.++.. 
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYR-VVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCE-EEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            4578999999 99999999999999997 8999999887655422    2  2 3333334555667777777766543 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      ..++|++|+++|..
T Consensus        85 ~g~iD~lvnnAg~~   98 (250)
T 3nyw_A           85 YGAVDILVNAAAMF   98 (250)
T ss_dssp             HCCEEEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence            24799999999863

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.81  E-value=7.3e-05  Score=67.61  Aligned_cols=84  Identities=24%  Similarity=0.211  Sum_probs=62.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HH-cCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KE-MGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+    ++ .+....+..-|..+.+++++.+.++.. ..
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGAR-LVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999999 99999999999999998 99999988776543    22 465554444555566666666665533 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        98 ~id~lv~nAg~~  109 (266)
T 4egf_A           98 GLDVLVNNAGIS  109 (266)
T ss_dssp             SCSEEEEECCCC
T ss_pred             CCCEEEECCCcC
Confidence            799999999854

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.81  E-value=7.8e-05  Score=70.86  Aligned_cols=75  Identities=23%  Similarity=0.340  Sum_probs=57.1

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      +.+++|+|+|++|+.+++.++.+|++ |++++++.++++.+++ +|++...+..+   .+++.+.+.      ++|++|+
T Consensus       166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~-V~~~d~~~~~~~~~~~~~g~~~~~~~~~---~~~l~~~~~------~~DvVi~  235 (369)
T 2eez_A          166 PASVVILGGGTVGTNAAKIALGMGAQ-VTILDVNHKRLQYLDDVFGGRVITLTAT---EANIKKSVQ------HADLLIG  235 (369)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHTTTSEEEEECC---HHHHHHHHH------HCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEECCHHHHHHHHHhcCceEEEecCC---HHHHHHHHh------CCCEEEE
Confidence            48999999999999999999999995 9999999999888765 77764444322   245554442      6899999


Q ss_pred             cccchh
Q psy1413         396 CSGIES  401 (408)
Q Consensus       396 ~~g~~~  401 (408)
                      |+|...
T Consensus       236 ~~g~~~  241 (369)
T 2eez_A          236 AVLVPG  241 (369)
T ss_dssp             CCC---
T ss_pred             CCCCCc
Confidence            999654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.81  E-value=0.0001  Score=68.01  Aligned_cols=84  Identities=26%  Similarity=0.311  Sum_probs=64.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+    ++.+....+...|..+.+++.+.+.++.. ..+
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGAR-LVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            5679999999 99999999999999997 99999998876543    33455555555666677777777776543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       109 id~lvnnAg~~  119 (301)
T 3tjr_A          109 VDVVFSNAGIV  119 (301)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCcC
Confidence            99999999854

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.80  E-value=8.7e-05  Score=66.54  Aligned_cols=84  Identities=20%  Similarity=0.234  Sum_probs=63.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+...|..+.+++++.+.++.. ..++|+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAK-VAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3578999999 99999999999999997 89999998877654 44565544445566667777777766532 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        84 lv~~Ag~~   91 (253)
T 1hxh_A           84 LVNNAGIL   91 (253)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999853

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.80  E-value=0.00012  Score=66.95  Aligned_cols=84  Identities=24%  Similarity=0.240  Sum_probs=63.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH---cCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE---MGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~---~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++   .|....+-.-|..+.+++++.+.++.. ..+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVT-VGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999 99999999999999997 88999998876554 22   344544445566667777777776543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       106 iD~lVnnAg~~  116 (283)
T 3v8b_A          106 LDIVVANAGIN  116 (283)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999963

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.80  E-value=6.8e-05  Score=66.34  Aligned_cols=83  Identities=17%  Similarity=0.134  Sum_probs=62.1

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-----HcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-----EMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.     +.+....+..-|..+.+++.+.+.++.. ..+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYA-LALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            468999999 99999999999999998 999999987765431     3465555555566667777766655432 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        81 id~li~~Ag~~   91 (235)
T 3l77_A           81 VDVVVANAGLG   91 (235)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCccc
Confidence            99999999864

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.80  E-value=0.0001  Score=66.94  Aligned_cols=84  Identities=23%  Similarity=0.236  Sum_probs=60.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH---HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK---EMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~---~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      .++++||+|+ |++|..+++.+...|++ |+++++++...+.++   +.+....+...|..+.+++++....+....++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAH-VLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            4678999999 99999999999999997 888887654444333   345444444556666677766644443345899


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      ++|+++|..
T Consensus       109 ~lv~nAg~~  117 (273)
T 3uf0_A          109 VLVNNAGII  117 (273)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999864

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.80  E-value=0.00014  Score=66.16  Aligned_cols=84  Identities=24%  Similarity=0.237  Sum_probs=62.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|....+...|..+.+++++.+.++.. ..+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLR-VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999 99999999999999997 88899988776543    33365544444556667777777766543 347


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       100 iD~lv~~Ag~~  110 (277)
T 2rhc_B          100 VDVLVNNAGRP  110 (277)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.80  E-value=0.0001  Score=67.07  Aligned_cols=84  Identities=21%  Similarity=0.224  Sum_probs=63.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|....+...|..+.+++++.+.++.. ..+
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQ-VAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999 99999999999999997 88899987775543    33454444445566667777777776543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       110 iD~lvnnAg~~  120 (276)
T 3r1i_A          110 IDIAVCNAGIV  120 (276)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999864

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.80  E-value=9e-05  Score=66.81  Aligned_cols=83  Identities=24%  Similarity=0.281  Sum_probs=63.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++++.+    ++.|....+...|..+.+++.+.+.++.. ..+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            4678999999 99999999999999998 89999998776543    33455555555566667777777766533 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|+++|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999986

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.79  E-value=0.00012  Score=65.07  Aligned_cols=84  Identities=25%  Similarity=0.277  Sum_probs=61.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-----cCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-----MGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-----~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+     .+....+...|..+.+++++.+.++.. ..
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGST-VIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3578999999 99999999999999997 8889998877654322     354444434455566777777766543 34


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus        85 ~~d~vi~~Ag~~   96 (248)
T 2pnf_A           85 GIDILVNNAGIT   96 (248)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.79  E-value=0.0001  Score=66.28  Aligned_cols=84  Identities=24%  Similarity=0.315  Sum_probs=63.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+..-|..+.+++++.+.++.. ..++|+
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGAS-AVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            4578999999 99999999999999997 88899988776554 55665544444555666777777665532 237999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        90 li~~Ag~~   97 (265)
T 2o23_A           90 AVNCAGIA   97 (265)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccC
Confidence            99999853

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.79  E-value=0.00012  Score=65.86  Aligned_cols=82  Identities=20%  Similarity=0.221  Sum_probs=61.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc--CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ--GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|....+...|..+.+++++.+.++..  ..
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGAT-VYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3578999999 99999999999999997 88899987776543    22354444444566667778777777643  35


Q ss_pred             CCceEEEccc
Q psy1413         389 QPDKTIDCSG  398 (408)
Q Consensus       389 ~~d~i~d~~g  398 (408)
                      ++|++|++.|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            7999999995

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.78  E-value=9.4e-05  Score=67.12  Aligned_cols=84  Identities=23%  Similarity=0.292  Sum_probs=65.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|....+..-|..+.+++++.+.++.. ..+
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGAR-ILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            4678999999 99999999999999997 88899988776543    34466655555666677788877776643 347


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       104 iD~lv~nAg~~  114 (271)
T 4ibo_A          104 VDILVNNAGIQ  114 (271)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.78  E-value=0.00016  Score=64.83  Aligned_cols=82  Identities=20%  Similarity=0.210  Sum_probs=61.0

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|....+...|..+.+++++.+.++.. ..++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFA-VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999 99999999999999997 88899988776543    23354444444555666777777766533 3479


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |++|+++|.
T Consensus        81 d~lv~nAg~   89 (256)
T 1geg_A           81 DVIVNNAGV   89 (256)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.77  E-value=9.7e-05  Score=67.26  Aligned_cols=84  Identities=20%  Similarity=0.136  Sum_probs=64.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+..-|..+.+++.+.+.++.. ..++|+
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDT-VIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            3578999999 99999999999999997 89999998877655 44555544444566667777777766533 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        83 lv~~Ag~~   90 (281)
T 3m1a_A           83 LVNNAGRT   90 (281)
T ss_dssp             EEECCCCE
T ss_pred             EEECCCcC
Confidence            99999854

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.77  E-value=0.00017  Score=65.31  Aligned_cols=84  Identities=26%  Similarity=0.324  Sum_probs=62.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|....+...|..+.+++.+.+.++.. ..+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSK-LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            4578999999 99999999999999997 88899988766543    33455544444555666777777766533 347


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       109 iD~li~~Ag~~  119 (272)
T 1yb1_A          109 VSILVNNAGVV  119 (272)
T ss_dssp             CSEEEECCCCC
T ss_pred             CcEEEECCCcC
Confidence            99999999853

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.76  E-value=0.00014  Score=65.48  Aligned_cols=84  Identities=26%  Similarity=0.358  Sum_probs=62.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+    ++.|....+...|..+.+++++.+.++.. ..+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTA-IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999 99999999999999997 88899988776543    22355544444555667777777666543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|++.|..
T Consensus        85 id~lv~nAg~~   95 (262)
T 1zem_A           85 IDFLFNNAGYQ   95 (262)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999854

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.76  E-value=0.00014  Score=65.86  Aligned_cols=83  Identities=23%  Similarity=0.256  Sum_probs=61.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+. ++.. ..+-..|..+.+++++.+.++.. ..++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGAR-VVICDKDESGGRALEQELPG-AVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHCTT-EEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhcC-CeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999999 99999999999999997 888999988776653 3332 22333455566777776665532 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|++.|..
T Consensus        86 lv~nAg~~   93 (270)
T 1yde_A           86 VVNNAGHH   93 (270)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999853

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.76  E-value=8.8e-05  Score=67.65  Aligned_cols=84  Identities=23%  Similarity=0.209  Sum_probs=63.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc---CCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM---GADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~---ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ +++   +....+...|..+.+++.+.+.++.. ..+
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAK-VVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999 99999999999999998 99999998876654 232   44555545566667777777766543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        86 iD~lvnnAg~~   96 (280)
T 3tox_A           86 LDTAFNNAGAL   96 (280)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999854

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.75  E-value=0.00015  Score=65.02  Aligned_cols=84  Identities=23%  Similarity=0.346  Sum_probs=62.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+....+...|..+.+++++.+.++.. ..+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGAR-VIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999 99999999999999997 99999987765432    33455444444555666777777766532 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        91 id~vi~~Ag~~  101 (260)
T 3awd_A           91 VDILVACAGIC  101 (260)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.75  E-value=0.00013  Score=65.66  Aligned_cols=84  Identities=14%  Similarity=0.079  Sum_probs=64.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHH---HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLK---TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~---~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++++.++.+   .+++.|........|..+.+++++.+.++.. -+++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAI-PVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4688999999 99999999999999998 888888866543   3445565555555666677888777777644 2579


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |+++++.|..
T Consensus        85 DiLVNnAGi~   94 (258)
T 4gkb_A           85 DGLVNNAGVN   94 (258)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999864

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.74  E-value=0.0001  Score=67.41  Aligned_cols=84  Identities=18%  Similarity=0.227  Sum_probs=63.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-----------HHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-----------LKTAKEMGADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-----------~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++           .+.+++.+....+...|..+.+++++.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGAN-VALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCE-EEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4678999999 99999999999999997 8889988652           233445566555555566677777777776


Q ss_pred             Hhc-CCCCceEEEcccch
Q psy1413         384 LLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       384 ~~~-~~~~d~i~d~~g~~  400 (408)
                      +.. ..++|++|+++|..
T Consensus        87 ~~~~~g~id~lvnnAg~~  104 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASAI  104 (285)
T ss_dssp             HHHHHSCCSEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCC
Confidence            643 24799999999864

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.74  E-value=0.00012  Score=65.95  Aligned_cols=84  Identities=18%  Similarity=0.220  Sum_probs=62.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-HHHH-HHc----CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-LKTA-KEM----GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-~~~~-~~~----ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++ .+.+ +++    |....+...|..+.+++++.+.++.. .
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGAD-IVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3578999999 99999999999999997 8888988766 5433 222    65554445566667777777766543 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus        82 g~iD~lv~~Ag~~   94 (260)
T 1x1t_A           82 GRIDILVNNAGIQ   94 (260)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999853

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.73  E-value=0.00014  Score=65.47  Aligned_cols=84  Identities=20%  Similarity=0.200  Sum_probs=61.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++.....+-..|..+.+++++.+.++.. ..++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAK-VVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3578999999 99999999999999997 88899998777654 33433333333455566777777665533 237999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        85 lv~~Ag~~   92 (260)
T 1nff_A           85 LVNNAGIL   92 (260)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999853

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.73  E-value=7.1e-05  Score=71.51  Aligned_cols=79  Identities=24%  Similarity=0.330  Sum_probs=57.7

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeE-EecCCC------------CC---hHHHHH
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT-VLIDRN------------HS---LEEIST  379 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~-i~~~~~------------~~---~~~~~~  379 (408)
                      ++.+++|+|+|.+|+.++++++.+|++ |++++++..+++.++++|++.+ ++..+.            .+   .....+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGAV-VMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            678999999999999999999999997 9999999999999988998755 232110            00   000122


Q ss_pred             HHHHHhcCCCCceEEEcc
Q psy1413         380 HIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       380 ~~~~~~~~~~~d~i~d~~  397 (408)
                      .+.+..  +++|+||+|+
T Consensus       250 ~l~~~~--~~aDvVi~~~  265 (384)
T 1l7d_A          250 AVLKEL--VKTDIAITTA  265 (384)
T ss_dssp             HHHHHH--TTCSEEEECC
T ss_pred             HHHHHh--CCCCEEEECC
Confidence            344544  3699999999

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.73  E-value=0.00014  Score=66.17  Aligned_cols=83  Identities=19%  Similarity=0.165  Sum_probs=63.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-H----HcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-K----EMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.. +    +.|....+..-|..+.+++++.+.++.. ..
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCH-TVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5689999999 99999999999999996 88899987765433 2    2465555555566677777777776643 24


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|++|+++|.
T Consensus       105 ~id~lv~nAg~  115 (277)
T 4fc7_A          105 RIDILINCAAG  115 (277)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcC
Confidence            79999999984

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.73  E-value=0.00014  Score=64.85  Aligned_cols=82  Identities=32%  Similarity=0.338  Sum_probs=60.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++|+. .+ ..|..+.+++++.+.++.. ..++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~-~~-~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGAR-LVACDIEEGPLREAAEAVGAH-PV-VMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTTCE-EE-ECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHcCCE-EE-EecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3578999999 99999999999999997 88899998877655 345532 22 3344556777766665532 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|++.|..
T Consensus        81 lvn~Ag~~   88 (245)
T 1uls_A           81 VVHYAGIT   88 (245)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999853

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.73  E-value=0.00021  Score=65.74  Aligned_cols=83  Identities=20%  Similarity=0.289  Sum_probs=62.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc----CCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM----GADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~----ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++    +....+...|..+.+++++.+.++.. ..
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQ-CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999 99999999999999997 89999988776543 222    55544445566667777777766532 34


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|++|+++|.
T Consensus       104 ~id~li~~Ag~  114 (302)
T 1w6u_A          104 HPNIVINNAAG  114 (302)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.73  E-value=0.00018  Score=64.93  Aligned_cols=84  Identities=14%  Similarity=0.113  Sum_probs=62.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HH-cCCC-eEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KE-MGAD-ATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~-~ga~-~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++.+.+    ++ .+.. ......|..+.+++.+.+.++.. .
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAA-VAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4678999999 99999999999999998 89999998776543    22 3332 44444566667777777766543 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|++.|..
T Consensus        86 g~id~lvnnAg~~   98 (265)
T 3lf2_A           86 GCASILVNNAGQG   98 (265)
T ss_dssp             CSCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999863

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.72  E-value=0.00018  Score=65.52  Aligned_cols=84  Identities=20%  Similarity=0.222  Sum_probs=62.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC------------hhhHH----HHHHcCCCeEEecCCCCChHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL------------EHKLK----TAKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~------------~~~~~----~~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+            .++++    .+++.|....+..-|..+.++++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGAD-IAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            4678999999 99999999999999998 8888886            33332    23445655555555666777777


Q ss_pred             HHHHHHhc-CCCCceEEEcccch
Q psy1413         379 THIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       379 ~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +.+.++.. ..++|++|+++|..
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~  110 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGIS  110 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCC
Confidence            77776543 24799999999854

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.72  E-value=0.00013  Score=66.17  Aligned_cols=84  Identities=19%  Similarity=0.171  Sum_probs=62.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|.......-|..+.+++++.+.++.. ..+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAM-VIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999 99999999999999997 89999988776543    33454444444555666777777766543 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       106 iD~lvnnAg~~  116 (270)
T 3ftp_A          106 LNVLVNNAGIT  116 (270)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.72  E-value=0.00018  Score=63.84  Aligned_cols=80  Identities=24%  Similarity=0.223  Sum_probs=57.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      +++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++....++ ..|..+.+++++.+.   ...++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~---~~~~id~v   80 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGAR-VVAVSRTQADLDSLVRECPGIEPV-CVDLGDWEATERALG---SVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHSTTCEEE-ECCTTCHHHHHHHHT---TCCCCCEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHcCCCCEE-EEeCCCHHHHHHHHH---HcCCCCEE
Confidence            4678999999 99999999999999997 88899998877655 333322333 334445556555554   23479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus        81 i~~Ag~~   87 (244)
T 3d3w_A           81 VNNAAVA   87 (244)
T ss_dssp             EECCCCC
T ss_pred             EECCccC
Confidence            9999853

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.72  E-value=0.00015  Score=65.10  Aligned_cols=83  Identities=16%  Similarity=0.150  Sum_probs=61.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|....+...|..+.+++++.+.++.. ..+
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAH-VVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999 99999999999999997 88899988765433    33454444444555566777776665532 247


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|++|++.|.
T Consensus        92 iD~lv~~Ag~  101 (260)
T 2zat_A           92 VDILVSNAAV  101 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.72  E-value=0.00012  Score=65.33  Aligned_cols=82  Identities=20%  Similarity=0.197  Sum_probs=62.1

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI  394 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~  394 (408)
                      .++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++....+...|..+.+++++.+.++.. ..++|++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHK-VIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            36899999 99999999999999997 88899998877655 44554444444555667777777776543 24799999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      ++.|..
T Consensus        80 nnAg~~   85 (248)
T 3asu_A           80 NNAGLA   85 (248)
T ss_dssp             ECCCCC
T ss_pred             ECCCcC
Confidence            999853

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.71  E-value=0.00016  Score=65.08  Aligned_cols=83  Identities=13%  Similarity=0.151  Sum_probs=62.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |+++ +|+.++.+.+    ++.|....+...|..+.+++++.+.++.. ..
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~-vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYN-IVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5678999999 99999999999999998 5554 7887765543    33465555555666677777777776643 24


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|++|++.|.
T Consensus        82 ~id~lv~nAg~   92 (258)
T 3oid_A           82 RLDVFVNNAAS   92 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.71  E-value=0.00015  Score=65.91  Aligned_cols=84  Identities=20%  Similarity=0.218  Sum_probs=62.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-------H----HHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-------L----KTAKEMGADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-------~----~~~~~~ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++       +    +.+++.|....+...|..+.+++++.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGAN-VAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4678999999 99999999999999997 8889887643       2    22344565555555666677777777776


Q ss_pred             Hhc-CCCCceEEEcccch
Q psy1413         384 LLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       384 ~~~-~~~~d~i~d~~g~~  400 (408)
                      +.. ..++|++|++.|..
T Consensus        84 ~~~~~g~iD~lvnnAG~~  101 (274)
T 3e03_A           84 TVDTFGGIDILVNNASAI  101 (274)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCcc
Confidence            643 24799999999853

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.71  E-value=0.00016  Score=65.12  Aligned_cols=84  Identities=15%  Similarity=0.156  Sum_probs=60.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+. ++.....+...|..+.+++++.+.++.. ..++|+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGAT-VAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3678999999 99999999999999997 888999988776553 3432223333455556777766665532 237999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        90 lv~~Ag~~   97 (263)
T 3ak4_A           90 LCANAGVS   97 (263)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCcC
Confidence            99999853

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.71  E-value=0.00015  Score=66.18  Aligned_cols=84  Identities=23%  Similarity=0.248  Sum_probs=61.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-HH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-LK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++ .+    .+++.|....+...|..+.+++.+.+.++.. ..
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCK-VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999 99999999999999997 8888887543 22    2344565555445566667777777666532 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus       107 ~iD~lv~~Ag~~  118 (283)
T 1g0o_A          107 KLDIVCSNSGVV  118 (283)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            799999999854

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.71  E-value=0.00012  Score=68.94  Aligned_cols=84  Identities=24%  Similarity=0.246  Sum_probs=63.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-----------HHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-----------LKTAKEMGADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-----------~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++           .+.+++.|....+..-|..+.+++++.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~-Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGAN-IVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCE-EEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            4689999999 99999999999999997 8888888653           234455665555555566677777777776


Q ss_pred             Hhc-CCCCceEEEcccch
Q psy1413         384 LLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       384 ~~~-~~~~d~i~d~~g~~  400 (408)
                      +.. ..++|++|+++|..
T Consensus       123 ~~~~~g~iDilVnnAG~~  140 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAI  140 (346)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCC
Confidence            643 24799999999863

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.71  E-value=0.00018  Score=64.45  Aligned_cols=84  Identities=23%  Similarity=0.206  Sum_probs=58.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh--hhHHHHHHc--CCCeEEecCCCCCh-HHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE--HKLKTAKEM--GADATVLIDRNHSL-EEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~--~~~~~~~~~--ga~~~i~~~~~~~~-~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|+++|++++|+.  +..+.+++.  +....+-.-|..+. +++++.+.++.. ..
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            3578999999 99999999999999997688888875  334444433  33333333444444 566666655432 24


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|++|+++|.
T Consensus        84 ~id~lv~~Ag~   94 (254)
T 1sby_A           84 TVDILINGAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999985

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.71  E-value=0.00016  Score=64.50  Aligned_cols=83  Identities=25%  Similarity=0.362  Sum_probs=60.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++| +.++.+.+    ++.+....+...|..+.+++++.+.++.. ..+
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGAN-VVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999 99999999999999997 888888 66665433    33455444444555667777777766533 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        83 id~lv~nAg~~   93 (246)
T 2uvd_A           83 VDILVNNAGVT   93 (246)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.71  E-value=0.0002  Score=65.89  Aligned_cols=84  Identities=15%  Similarity=0.202  Sum_probs=63.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC------------hhhHH----HHHHcCCCeEEecCCCCChHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL------------EHKLK----TAKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~------------~~~~~----~~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++++            .++++    .+++.|....+...|..+.++++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGAD-IIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            4678999999 99999999999999998 8888776            44433    33455666655566667777777


Q ss_pred             HHHHHHhc-CCCCceEEEcccch
Q psy1413         379 THIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       379 ~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +.+.++.. ..++|++|+++|..
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~  128 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALA  128 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCCC
Confidence            77776543 24799999999854

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.70  E-value=0.0002  Score=65.02  Aligned_cols=84  Identities=21%  Similarity=0.274  Sum_probs=63.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC------------hhhHHH----HHHcCCCeEEecCCCCChHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL------------EHKLKT----AKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~------------~~~~~~----~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++++            .++++.    +++.+....+..-|..+.++++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGAD-IIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            4678999999 99999999999999998 8888876            444332    3445666555566666777777


Q ss_pred             HHHHHHhc-CCCCceEEEcccch
Q psy1413         379 THIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       379 ~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +.+.++.. ..++|++|+++|..
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~  113 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIA  113 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC
Confidence            77776543 24799999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.70  E-value=0.00025  Score=63.42  Aligned_cols=84  Identities=23%  Similarity=0.244  Sum_probs=60.2

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----Hc-CCCeEEecCCC--CChHHHHHHHHHHhc
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EM-GADATVLIDRN--HSLEEISTHIIELLQ  386 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~-ga~~~i~~~~~--~~~~~~~~~~~~~~~  386 (408)
                      -.++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.    +. +....+..-|.  .+.+++++.+.++..
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGAT-VILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            35689999999 99999999999999997 999999987765432    22 21222223333  456667776666543


Q ss_pred             -CCCCceEEEcccc
Q psy1413         387 -GEQPDKTIDCSGI  399 (408)
Q Consensus       387 -~~~~d~i~d~~g~  399 (408)
                       ..++|++|+++|.
T Consensus        89 ~~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 NYPRLDGVLHNAGL  102 (252)
T ss_dssp             HCSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             3479999999986

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.70  E-value=0.00024  Score=64.73  Aligned_cols=84  Identities=18%  Similarity=0.257  Sum_probs=61.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH----HHc-CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA----KEM-GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~----~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++| +.++++.+    ++. +....+...|..+.+++++.+.++.. .
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGAN-IVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            3578999999 99999999999999997 888888 44544433    222 44445555666677778777776643 3


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus       103 g~iD~lv~nAg~~  115 (281)
T 3v2h_A          103 GGADILVNNAGVQ  115 (281)
T ss_dssp             SSCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999863

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.70  E-value=0.00011  Score=65.15  Aligned_cols=81  Identities=20%  Similarity=0.221  Sum_probs=62.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++++.++++..  .+........|..+.+++++.+.+.   .++|+.+
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~-Vv~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~---g~iDiLV   83 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAE-VVALGLDADGVHAP--RHPRIRREELDITDSQRLQRLFEAL---PRLDVLV   83 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSTTSTTSC--CCTTEEEEECCTTCHHHHHHHHHHC---SCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHhhh--hcCCeEEEEecCCCHHHHHHHHHhc---CCCCEEE
Confidence            5899999999 99999999999999998 99999988776533  2333333345556677777777654   4799999


Q ss_pred             Ecccchhh
Q psy1413         395 DCSGIEST  402 (408)
Q Consensus       395 d~~g~~~~  402 (408)
                      |+.|....
T Consensus        84 NNAGi~~~   91 (242)
T 4b79_A           84 NNAGISRD   91 (242)
T ss_dssp             ECCCCCCG
T ss_pred             ECCCCCCC
Confidence            99997544

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.70  E-value=0.00016  Score=65.22  Aligned_cols=84  Identities=20%  Similarity=0.171  Sum_probs=61.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc--CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ--GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+....+...|..+.+++++.+.++..  +.
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAV-IHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999 99999999999999997 88899987765543    33355444444555666777777666543  14


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus        92 ~id~li~~Ag~~  103 (266)
T 1xq1_A           92 KLDILINNLGAI  103 (266)
T ss_dssp             CCSEEEEECCC-
T ss_pred             CCcEEEECCCCC
Confidence            799999999854

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.69  E-value=0.00013  Score=65.57  Aligned_cols=82  Identities=18%  Similarity=0.245  Sum_probs=60.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++  ..++++....+..-|..+.+++++.+..+....++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQ-VVVLDIRGED--VVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCE-EEEEESSCHH--HHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCchHH--HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            3578999999 99999999999999997 8888885443  334556555555556666777777766554445899999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      +++|..
T Consensus        85 ~nAg~~   90 (257)
T 3tl3_A           85 NCAGTG   90 (257)
T ss_dssp             ECGGGS
T ss_pred             ECCCCC
Confidence            999964

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.69  E-value=0.00023  Score=64.74  Aligned_cols=84  Identities=19%  Similarity=0.162  Sum_probs=61.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++..  ...+-..|..+.+++++.+.++.. ..++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGAR-VFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4578999999 99999999999999997 88999988776543 33321  333334455566777777766543 3479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|+++|..
T Consensus       107 D~lvnnAg~~  116 (276)
T 2b4q_A          107 DILVNNAGTS  116 (276)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999853

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.69  E-value=0.00018  Score=65.94  Aligned_cols=84  Identities=18%  Similarity=0.196  Sum_probs=62.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-HH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-LK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++++.++ .+    .+++.|....+...|..+.+++++.+.++.. ..
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGAN-IAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4679999999 99999999999999998 8888887553 22    2344566655555666677777777766543 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus       125 ~iD~lvnnAg~~  136 (291)
T 3ijr_A          125 SLNILVNNVAQQ  136 (291)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCCEEEECCCCc
Confidence            799999998854

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.69  E-value=0.00022  Score=65.04  Aligned_cols=84  Identities=19%  Similarity=0.219  Sum_probs=62.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC------------hhhHHH----HHHcCCCeEEecCCCCChHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL------------EHKLKT----AKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~------------~~~~~~----~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++++            .++++.    +++.+....+...|..+.+++.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGAD-IILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            4678999999 99999999999999998 8888876            444332    3445655555556666777777


Q ss_pred             HHHHHHhc-CCCCceEEEcccch
Q psy1413         379 THIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       379 ~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +.+.++.. ..++|++|+++|..
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~  110 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGIC  110 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCcC
Confidence            77766543 24799999999864

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.68  E-value=0.00016  Score=65.20  Aligned_cols=84  Identities=14%  Similarity=0.132  Sum_probs=62.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcC-CCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMG-ADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+ ....+...|..+.+++++.+.++.. ..
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGAN-VAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4678999999 99999999999999997 89999998876543    3334 3334444566667777777666533 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        88 ~id~lvnnAg~~   99 (262)
T 3pk0_A           88 GIDVVCANAGVF   99 (262)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.68  E-value=0.00018  Score=65.45  Aligned_cols=83  Identities=23%  Similarity=0.224  Sum_probs=62.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCC---CeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGA---DATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga---~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+.   ...+...|..+.+++++.+.++.. 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGAS-VMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4678999999 99999999999999997 88899988776543    33343   333444566667777777776643 


Q ss_pred             CCCCceEEEcccc
Q psy1413         387 GEQPDKTIDCSGI  399 (408)
Q Consensus       387 ~~~~d~i~d~~g~  399 (408)
                      ..++|++|+++|.
T Consensus        89 ~g~id~lv~nAg~  101 (281)
T 3svt_A           89 HGRLHGVVHCAGG  101 (281)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2479999999996

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.68  E-value=0.00023  Score=63.95  Aligned_cols=83  Identities=17%  Similarity=0.144  Sum_probs=60.2

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh--HHHH-H---HcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK--LKTA-K---EMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~--~~~~-~---~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++  .+.+ +   +.+....+-..|..+.+++.+.+.++.. ..
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFD-IAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            468999999 99999999999999997 8888888766  4432 2   2354444444555666777776665532 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        81 ~iD~lv~nAg~~   92 (258)
T 3a28_C           81 GFDVLVNNAGIA   92 (258)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.68  E-value=0.00012  Score=64.54  Aligned_cols=80  Identities=23%  Similarity=0.222  Sum_probs=60.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      +++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++....+...|..+.+++++.+.++.  ..+|++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~~d~lv~   78 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKA-TYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLD--SIPSTVVH   78 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCS--SCCSEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHh--hcCCEEEE
Confidence            36899999 99999999999999998 99999999888766 4455444444455566677777776653  34599999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      +.|..
T Consensus        79 ~Ag~~   83 (230)
T 3guy_A           79 SAGSG   83 (230)
T ss_dssp             CCCCC
T ss_pred             eCCcC
Confidence            99853

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.67  E-value=0.00021  Score=64.14  Aligned_cols=82  Identities=22%  Similarity=0.197  Sum_probs=60.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+..++++. .. -..|..+.+++++.+.++.. ..++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~-~~-~~~D~~~~~~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGAL-VALCDLRPEGKEVAEAIGG-AF-FQVDLEDERERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSTTHHHHHHHHTC-EE-EECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHhhC-CE-EEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3578999999 99999999999999997 8889998776333455542 33 33455566777777666532 2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |++.|..
T Consensus        82 v~~Ag~~   88 (256)
T 2d1y_A           82 VNNAAIA   88 (256)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999854

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.67  E-value=0.00026  Score=62.83  Aligned_cols=84  Identities=18%  Similarity=0.222  Sum_probs=61.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCC------eEEEEecChhhHHHHH-H---cCCCeEEecCCCCChHHHHHHHHHHh
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGAS------RVVITDILEHKLKTAK-E---MGADATVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~------~vv~~~~~~~~~~~~~-~---~ga~~~i~~~~~~~~~~~~~~~~~~~  385 (408)
                      ++++||+|+ |++|..+++.+...|++      +|++++|+.++.+.+. +   .+....+...|..+.+++.+.+.++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            457999999 99999999999999994      5999999887765442 2   24444444455556677777776654


Q ss_pred             c-CCCCceEEEcccch
Q psy1413         386 Q-GEQPDKTIDCSGIE  400 (408)
Q Consensus       386 ~-~~~~d~i~d~~g~~  400 (408)
                      . ..++|++|+++|..
T Consensus        82 ~~~g~id~li~~Ag~~   97 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVG   97 (244)
T ss_dssp             HHTSCCSEEEECCCCC
T ss_pred             HhCCCCCEEEEcCCcC
Confidence            3 24799999999853

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.67  E-value=9.9e-05  Score=65.63  Aligned_cols=85  Identities=18%  Similarity=0.120  Sum_probs=62.0

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCC-CeEEEEecChhhHHHHHHc-CCCeEEecCCCCChHHHHHHHHHHhcC---CCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGA-SRVVITDILEHKLKTAKEM-GADATVLIDRNHSLEEISTHIIELLQG---EQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga-~~vv~~~~~~~~~~~~~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~~---~~~  390 (408)
                      +.++||+|+ |++|..+++.+...|. .+|++++|+.++.+.+++. +....+...|..+.+++.+.+.++...   .++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i   82 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence            468999999 9999999999999993 3499999998887766655 434333344555666676666655321   279


Q ss_pred             ceEEEcccchh
Q psy1413         391 DKTIDCSGIES  401 (408)
Q Consensus       391 d~i~d~~g~~~  401 (408)
                      |++|+++|...
T Consensus        83 d~li~~Ag~~~   93 (250)
T 1yo6_A           83 SLLINNAGVLL   93 (250)
T ss_dssp             CEEEECCCCCC
T ss_pred             cEEEECCcccC
Confidence            99999998543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.66  E-value=0.00022  Score=65.11  Aligned_cols=84  Identities=21%  Similarity=0.215  Sum_probs=62.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+....+-..|..+.+++++.+.++.. ..+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSH-VICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSE-EEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4578999999 99999999999999987 77788887766543    22355544444555667777777766543 347


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       122 id~li~~Ag~~  132 (285)
T 2c07_A          122 VDILVNNAGIT  132 (285)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999854

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.66  E-value=0.00021  Score=63.66  Aligned_cols=83  Identities=17%  Similarity=0.189  Sum_probs=60.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc----CCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM----GADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~----ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++    +....+-..|..+.+++++.+.++.. ..+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDR-VAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            468999999 99999999999999987 88899988776554 222    43334444555666777777665532 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        81 id~li~~Ag~~   91 (250)
T 2cfc_A           81 IDVLVNNAGIT   91 (250)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.66  E-value=0.00021  Score=64.74  Aligned_cols=84  Identities=25%  Similarity=0.239  Sum_probs=62.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+ .++.+    .+++.+....+...|..+.+++.+.+.++.. ..
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLK-VWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999999 99999999999999997 8888884 44333    2344565555555666677777777776643 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus       107 ~id~li~nAg~~  118 (271)
T 4iin_A          107 GLSYLVNNAGVV  118 (271)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            799999999864

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.66  E-value=3e-05  Score=63.16  Aligned_cols=87  Identities=17%  Similarity=0.187  Sum_probs=63.3

Q ss_pred             hhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHH-HHHcCCCeEEecCCCCChHHHHHH
Q psy1413         302 LSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKT-AKEMGADATVLIDRNHSLEEISTH  380 (408)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~~~  380 (408)
                      +++++.+++......+.+++|+|+|.+|..+++.++..|++ |.+.+|+.++.+. ++++|.+. ...      +++.+.
T Consensus         6 ~sv~~~a~~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~-~~~------~~~~~~   77 (144)
T 3oj0_A            6 VSIPSIVYDIVRKNGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYEYEY-VLI------NDIDSL   77 (144)
T ss_dssp             CSHHHHHHHHHHHHCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHTCEE-EEC------SCHHHH
T ss_pred             ccHHHHHHHHHHhccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhCCce-Eee------cCHHHH
Confidence            44556666544445589999999999999999999999998 9999999988765 56777543 222      223333


Q ss_pred             HHHHhcCCCCceEEEcccchhh
Q psy1413         381 IIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       381 ~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      +      .++|+||+|++....
T Consensus        78 ~------~~~Divi~at~~~~~   93 (144)
T 3oj0_A           78 I------KNNDVIITATSSKTP   93 (144)
T ss_dssp             H------HTCSEEEECSCCSSC
T ss_pred             h------cCCCEEEEeCCCCCc
Confidence            3      258999999997643

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.66  E-value=0.00024  Score=64.55  Aligned_cols=84  Identities=20%  Similarity=0.154  Sum_probs=60.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCC--CeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGA--DATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.|.  ...+..-|..+.+++.+.+.++.. .
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLK-VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            4678999999 99999999999999997 88899987776543    33342  222333455566777776665532 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus       110 g~iD~vi~~Ag~~  122 (279)
T 1xg5_A          110 SGVDICINNAGLA  122 (279)
T ss_dssp             CCCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999853

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.66  E-value=0.00019  Score=64.66  Aligned_cols=82  Identities=23%  Similarity=0.189  Sum_probs=61.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH-HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL-KTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++. +.+++.++.  +...|..+.+++++.+.++.. ..++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHR-VIISYRTEHASVTELRQAGAV--ALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESSCCHHHHHHHHHTCE--EEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHhcCCe--EEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            3578999999 99999999999999998 88899987664 445556643  223455566777777776643 347999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus       103 lv~nAg~~  110 (260)
T 3gem_A          103 VVHNASEW  110 (260)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCcc
Confidence            99999853

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.65  E-value=0.00027  Score=62.71  Aligned_cols=79  Identities=20%  Similarity=0.149  Sum_probs=56.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+ ..-..++ ..|..+.+++++.+.   ...++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~---~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAK-VVAVTRTNSDLVSLAKECPGIEPV-CVDLGDWDATEKALG---GIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHSTTCEEE-ECCTTCHHHHHHHHT---TCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhccCCCcE-EecCCCHHHHHHHHH---HcCCCCEE
Confidence            3578999999 99999999999999997 8899998877765533 3212233 344445555555554   23479999


Q ss_pred             EEcccc
Q psy1413         394 IDCSGI  399 (408)
Q Consensus       394 ~d~~g~  399 (408)
                      |+++|.
T Consensus        81 i~~Ag~   86 (244)
T 1cyd_A           81 VNNAAL   86 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999984

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.65  E-value=0.00018  Score=65.33  Aligned_cols=84  Identities=15%  Similarity=0.051  Sum_probs=59.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH-HHc----CCCeEEecCCCCCh----HHHHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA-KEM----GADATVLIDRNHSL----EEISTHIIEL  384 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~-~~~----ga~~~i~~~~~~~~----~~~~~~~~~~  384 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++| +.++.+.+ +++    |....+...|..+.    +++++.+.++
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFR-VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            3578999999 99999999999999997 888998 77765543 222    54444434455555    6666665554


Q ss_pred             hc-CCCCceEEEcccch
Q psy1413         385 LQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       385 ~~-~~~~d~i~d~~g~~  400 (408)
                      .. ..++|++|+++|..
T Consensus        89 ~~~~g~id~lv~nAg~~  105 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAY  105 (276)
T ss_dssp             HHHHSCCCEEEECCCCC
T ss_pred             HHhcCCCCEEEECCCCC
Confidence            32 24799999999853

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.65  E-value=0.00015  Score=66.33  Aligned_cols=85  Identities=26%  Similarity=0.242  Sum_probs=63.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCC--eEEEEecChhhHHHHHH-c-----CCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGAS--RVVITDILEHKLKTAKE-M-----GADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~--~vv~~~~~~~~~~~~~~-~-----ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      .++++||+|+ |++|..+++.+...|++  +|++++|+.++++.+.+ +     +....+..-|..+.+++++.+.++..
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999 99999999998888872  59999999887765422 2     44444445566677888888877643


Q ss_pred             -CCCCceEEEcccch
Q psy1413         387 -GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 -~~~~d~i~d~~g~~  400 (408)
                       ..++|++|+++|..
T Consensus       112 ~~g~iD~lVnnAG~~  126 (287)
T 3rku_A          112 EFKDIDILVNNAGKA  126 (287)
T ss_dssp             GGCSCCEEEECCCCC
T ss_pred             hcCCCCEEEECCCcC
Confidence             24799999999854

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.64  E-value=0.00022  Score=63.88  Aligned_cols=84  Identities=17%  Similarity=0.157  Sum_probs=63.1

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCC-CeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGA-SRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga-~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      ++++||+|+ +++|..+++.+...|+ .+|++++|+.++++.+ +++|....+...|..+.+++++.+.++.. ..++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            468999999 9999999998888874 3488888998887665 44565555555566667777777776543 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ++++.|..
T Consensus        82 lvnnAg~~   89 (254)
T 3kzv_A           82 LVANAGVL   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEECCccc
Confidence            99999963

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=97.64  E-value=5.8e-05  Score=73.92  Aligned_cols=83  Identities=27%  Similarity=0.311  Sum_probs=64.2

Q ss_pred             hhhhhhccC--cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHH
Q psy1413         305 GVHACRRAG--VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHII  382 (408)
Q Consensus       305 ~~~~~~~~~--~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~  382 (408)
                      .++++.+..  ..++++++|+|.|.+|+.+++.++.+|++ |+++++++.+.+.++++|++ +++      .+   +   
T Consensus       260 ~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~-Viv~d~~~~~~~~A~~~Ga~-~~~------l~---e---  325 (494)
T 3ce6_A          260 LIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGAR-VSVTEIDPINALQAMMEGFD-VVT------VE---E---  325 (494)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHTTCE-ECC------HH---H---
T ss_pred             hhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCE-Eec------HH---H---
Confidence            444443332  67899999999999999999999999995 99999999998888889986 221      12   1   


Q ss_pred             HHhcCCCCceEEEcccchhhhh
Q psy1413         383 ELLQGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       383 ~~~~~~~~d~i~d~~g~~~~~~  404 (408)
                       +.  +++|+|++|+|....++
T Consensus       326 -~l--~~aDvVi~atgt~~~i~  344 (494)
T 3ce6_A          326 -AI--GDADIVVTATGNKDIIM  344 (494)
T ss_dssp             -HG--GGCSEEEECSSSSCSBC
T ss_pred             -HH--hCCCEEEECCCCHHHHH
Confidence             12  36899999999776554

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.64  E-value=0.0002  Score=65.15  Aligned_cols=84  Identities=21%  Similarity=0.245  Sum_probs=61.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH---cCC---CeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE---MGA---DATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~---~ga---~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++   .+.   ...+...|..+.+++++.+.++.. 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGAN-VTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4578999999 99999999999999997 88899998776544 22   233   333334555666777777666532 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      ..++|++|++.|..
T Consensus        84 ~g~iD~lv~nAg~~   97 (280)
T 1xkq_A           84 FGKIDVLVNNAGAA   97 (280)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            24799999999854

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.64  E-value=0.00023  Score=62.78  Aligned_cols=82  Identities=20%  Similarity=0.186  Sum_probs=59.4

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+ ..|..+.+++++.+.++.. ..++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYR-VGLMARDEKRLQALAAELEGALPL-PGDVREEGDWARAVAAMEEAFGELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHSTTCEEE-ECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhhhceEE-EecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999 99999999999999997 88899988877655 334322222 3344556777666665532 2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |++.|..
T Consensus        83 i~~Ag~~   89 (234)
T 2ehd_A           83 VNNAGVG   89 (234)
T ss_dssp             EECCCCC
T ss_pred             EECCCcC
Confidence            9999853

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.64  E-value=0.00027  Score=64.95  Aligned_cols=83  Identities=23%  Similarity=0.237  Sum_probs=60.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH--------cCCCeEEecCCCCChHHHHHHHHHHh
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE--------MGADATVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~--------~ga~~~i~~~~~~~~~~~~~~~~~~~  385 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++        .+....+...|..+.+++++.+.++.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSN-VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            4578999999 99999999999999997 88899988776543 22        24444444455566677777766653


Q ss_pred             c-CCCCceEEEcccc
Q psy1413         386 Q-GEQPDKTIDCSGI  399 (408)
Q Consensus       386 ~-~~~~d~i~d~~g~  399 (408)
                      . ..++|++|+++|.
T Consensus        96 ~~~g~id~li~~Ag~  110 (303)
T 1yxm_A           96 DTFGKINFLVNNGGG  110 (303)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            2 2479999999984

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.63  E-value=0.0003  Score=63.98  Aligned_cols=84  Identities=19%  Similarity=0.227  Sum_probs=62.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-------------ChhhHHHH----HHcCCCeEEecCCCCChHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-------------LEHKLKTA----KEMGADATVLIDRNHSLEEI  377 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-------------~~~~~~~~----~~~ga~~~i~~~~~~~~~~~  377 (408)
                      .++++||+|+ +++|..+++.+...|++ |+++++             +.++++.+    ++.|....+..-|..+.+++
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGAD-IIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            4688999999 99999999999999998 888887             45554433    33465555555566677777


Q ss_pred             HHHHHHHhc-CCCCceEEEcccch
Q psy1413         378 STHIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       378 ~~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      ++.+.++.. ..++|++|+++|..
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~  116 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVL  116 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCC
Confidence            777776543 24799999999864

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.63  E-value=0.00027  Score=64.44  Aligned_cols=84  Identities=17%  Similarity=0.173  Sum_probs=62.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC----------------hhhHHHH----HHcCCCeEEecCCCCCh
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL----------------EHKLKTA----KEMGADATVLIDRNHSL  374 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~----------------~~~~~~~----~~~ga~~~i~~~~~~~~  374 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++++                .++++.+    ++.+....+...|..+.
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGAD-IIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            4688999999 99999999999999998 8888776                4444332    33455555555566677


Q ss_pred             HHHHHHHHHHhc-CCCCceEEEcccch
Q psy1413         375 EEISTHIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       375 ~~~~~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +++++.+.++.. ..++|++|+++|..
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~  115 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIG  115 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCccc
Confidence            777777776543 24799999999853

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.63  E-value=0.00021  Score=65.14  Aligned_cols=84  Identities=20%  Similarity=0.188  Sum_probs=60.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-H---cCCCe-EEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-E---MGADA-TVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~---~ga~~-~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+. +   .+... .+..-|..+.+++++.+.++.. ..
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYS-VVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999 99999999999999997 999999987765432 2   22222 3334455666777777766533 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus       111 ~iD~lvnnAG~~  122 (281)
T 4dry_A          111 RLDLLVNNAGSN  122 (281)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999863

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.63  E-value=0.00019  Score=64.05  Aligned_cols=84  Identities=26%  Similarity=0.235  Sum_probs=61.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+....+...|..+.+++++.+.++.. ..+
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            3578999999 99999999999999987 88899987765433    33454444444555566777776665432 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        89 ~d~vi~~Ag~~   99 (255)
T 1fmc_A           89 VDILVNNAGGG   99 (255)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.62  E-value=0.00025  Score=65.85  Aligned_cols=84  Identities=24%  Similarity=0.247  Sum_probs=62.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC------------hhhHH----HHHHcCCCeEEecCCCCChHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL------------EHKLK----TAKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~------------~~~~~----~~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++++            .++++    .+++.|....+...|..+.++++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGAD-IVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCe-EEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            4678999999 99999999999999998 8877765            33333    23445666555556666777777


Q ss_pred             HHHHHHhc-CCCCceEEEcccch
Q psy1413         379 THIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       379 ~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +.+.++.. ..++|++|+++|..
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~  146 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGIS  146 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC
Confidence            77776643 24799999999854

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.62  E-value=0.00011  Score=70.36  Aligned_cols=49  Identities=33%  Similarity=0.404  Sum_probs=44.6

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT  365 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~  365 (408)
                      ++.+++|+|+|.+|+.++++++.+|++ |++++++.++++.++++|++.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~v~D~~~~~~~~~~~lGa~~~  219 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGAI-VRAFDTRPEVKEQVQSMGAEFL  219 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCGGGHHHHHHTTCEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHcCCEEE
Confidence            578999999999999999999999995 9999999999998999998754

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.62  E-value=0.00027  Score=64.35  Aligned_cols=83  Identities=20%  Similarity=0.212  Sum_probs=60.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |+++++ +.++.+.    +++.|....+...|..+.+++++.+.++.. ..
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFD-IAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCe-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999999 99999999999999998 777775 5555433    344565555545566666777776666543 24


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|++|+++|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            79999999987

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.61  E-value=0.00022  Score=63.86  Aligned_cols=83  Identities=20%  Similarity=0.230  Sum_probs=59.9

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh--HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK--LKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~--~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++  .+.+++.|....+...|..+.+++++.+.++.. ..++|+
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGAN-IVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCE-EEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999 99999999999999997 8888887652  223333455544444555666777777665532 237999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|++.|..
T Consensus        83 lv~~Ag~~   90 (255)
T 2q2v_A           83 LVNNAGIQ   90 (255)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999853

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.61  E-value=0.00021  Score=63.93  Aligned_cols=83  Identities=25%  Similarity=0.253  Sum_probs=60.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+ .++.+.+    ++.+....+...|..+.+++++.+.++.. ..
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAK-VGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999 99999999999999997 8888888 6665433    23354444444555667777777766543 23


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|++|+++|.
T Consensus        85 ~id~vi~~Ag~   95 (258)
T 3afn_B           85 GIDVLINNAGG   95 (258)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.61  E-value=0.00026  Score=63.82  Aligned_cols=84  Identities=29%  Similarity=0.403  Sum_probs=62.4

Q ss_pred             CCCEEEEEec-c-hhHHHHHHHHHHhCCCeEEEEecChhhHHHH-H---HcC-CCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-G-PIGLVTLLTARALGASRVVITDILEHKLKTA-K---EMG-ADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G-~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~---~~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ | ++|..+++.+...|++ |++++|+.++.+.+ +   +.+ ....+..-|..+.+++++.+.++.. .
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            4678999998 7 8999999999999998 89999998776543 2   223 3444444566667777777766543 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus       100 g~id~li~~Ag~~  112 (266)
T 3o38_A          100 GRLDVLVNNAGLG  112 (266)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCcEEEECCCcC
Confidence            4799999999853

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.61  E-value=0.00024  Score=65.18  Aligned_cols=84  Identities=18%  Similarity=0.135  Sum_probs=61.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc---C-CCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM---G-ADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~---g-a~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ +++   + ....+...|..+.+++++.+.++.. ..
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGAN-VAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4678999999 99999999999999997 88999998776543 333   3 2333334556667777777666533 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus       119 ~iD~lvnnAg~~  130 (293)
T 3rih_A          119 ALDVVCANAGIF  130 (293)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.61  E-value=0.0002  Score=66.72  Aligned_cols=84  Identities=26%  Similarity=0.275  Sum_probs=63.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC----------hhhHH----HHHHcCCCeEEecCCCCChHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL----------EHKLK----TAKEMGADATVLIDRNHSLEEISTH  380 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~----------~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~  380 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++++          .++.+    .+++.|....+...|..+.+++.+.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            4688999999 99999999999999997 8888876          33333    3344566666666677777787777


Q ss_pred             HHHHhc-CCCCceEEEcccch
Q psy1413         381 IIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       381 ~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +.++.. ..++|++|+++|..
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~~  125 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGIV  125 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            776643 24799999999864

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.61  E-value=0.00027  Score=63.83  Aligned_cols=81  Identities=22%  Similarity=0.222  Sum_probs=58.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHc--CCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEM--GADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~--ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+..    ++.  +........|..+.+++.+.+.+.   .
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---g   84 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGAN-VLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY---P   84 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC---C
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc---C
Confidence            4578999999 99999999999999997 88999998775443    222  233333344555566666665543   4


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|+++++.|..
T Consensus        85 ~id~lv~nAg~~   96 (267)
T 3t4x_A           85 KVDILINNLGIF   96 (267)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999854

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.60  E-value=0.00026  Score=64.10  Aligned_cols=84  Identities=24%  Similarity=0.289  Sum_probs=61.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ +++|..+++.+...|++ |+++++ +.++.+    .+++.|....+..-|..+.+++++.+.++.. ..
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAK-VVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999 99999999999999998 666654 444433    3345666665556666777778777776643 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus        96 ~id~lvnnAg~~  107 (270)
T 3is3_A           96 HLDIAVSNSGVV  107 (270)
T ss_dssp             CCCEEECCCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.60  E-value=0.00027  Score=63.97  Aligned_cols=84  Identities=20%  Similarity=0.225  Sum_probs=61.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |+++++ +.++.+.    +++.|....+...|..+.+++++.+.++.. ..
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAK-VAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999 99999999999999998 777776 5444433    344565555555666677777777766543 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus       106 ~id~lv~nAg~~  117 (269)
T 4dmm_A          106 RLDVLVNNAGIT  117 (269)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999864

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.60  E-value=0.0003  Score=65.37  Aligned_cols=83  Identities=18%  Similarity=0.198  Sum_probs=62.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCC--CeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGA--DATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+    ++.+.  ...+..-|..+.+++.+.+.++.. .
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~-Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCK-VAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            4578999999 99999999999999997 99999998876543    22343  444444566667777777776643 3


Q ss_pred             CCCceEEEcccc
Q psy1413         388 EQPDKTIDCSGI  399 (408)
Q Consensus       388 ~~~d~i~d~~g~  399 (408)
                      .++|++|+++|.
T Consensus        86 g~id~lv~nAg~   97 (319)
T 3ioy_A           86 GPVSILCNNAGV   97 (319)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999985

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.59  E-value=0.00036  Score=63.20  Aligned_cols=84  Identities=21%  Similarity=0.241  Sum_probs=61.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++.  ...+...|..+.+++.+.+.++.. ..++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAK-VVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999999 99999999999999997 88889987766543 34432  333334455566777777665532 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|++.|..
T Consensus        94 d~li~~Ag~~  103 (278)
T 2bgk_A           94 DIMFGNVGVL  103 (278)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCccc
Confidence            9999999854

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.59  E-value=0.00028  Score=63.65  Aligned_cols=84  Identities=15%  Similarity=0.140  Sum_probs=60.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc-----CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM-----GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++     +....+...|..+.+++++.+.++.. .
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAK-VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            4578999999 99999999999999997 88899988776543 222     22233334455566777777666532 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus        85 g~id~lv~~Ag~~   97 (267)
T 2gdz_A           85 GRLDILVNNAGVN   97 (267)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999853

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.59  E-value=0.00026  Score=65.11  Aligned_cols=84  Identities=23%  Similarity=0.252  Sum_probs=61.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCC---CeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGA---DATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga---~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+    ++.|.   ...+...|..+.+++++.+.++.. 
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQ-VTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            4578999999 99999999999999997 88899998776543    22343   333334555666777777666532 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      ..++|++|+++|..
T Consensus       104 ~g~iD~lvnnAG~~  117 (297)
T 1xhl_A          104 FGKIDILVNNAGAN  117 (297)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence            24799999999853

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.59  E-value=0.00022  Score=64.72  Aligned_cols=84  Identities=18%  Similarity=0.195  Sum_probs=59.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc------CCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM------GADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~------ga~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ +++      +....+...|..+.+++++.+.++.. 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAK-VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            3578999999 99999999999999997 88899998776654 223      22333333455566777776665532 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      ..++|++|+++|..
T Consensus        84 ~g~id~lv~~Ag~~   97 (278)
T 1spx_A           84 FGKLDILVNNAGAA   97 (278)
T ss_dssp             HSCCCEEEECCC--
T ss_pred             cCCCCEEEECCCCC
Confidence            24799999999854

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.58  E-value=0.00015  Score=65.64  Aligned_cols=82  Identities=17%  Similarity=0.128  Sum_probs=60.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+...  ......-|..+.+++.+.+.++.. ..++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHP-LLLLARRVERLKALNLP--NTLCAQVDVTDKYTFDTAITRAEKIYGPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHHHHHTTCCT--TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHhhcC--CceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            3578999999 99999999999999998 88899988776544221  223333455566777777766543 2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus        92 vnnAg~~   98 (266)
T 3p19_A           92 VNNAGMM   98 (266)
T ss_dssp             EECCCCC
T ss_pred             EECCCcC
Confidence            9999864

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.58  E-value=0.00029  Score=64.42  Aligned_cols=84  Identities=17%  Similarity=0.073  Sum_probs=61.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHHHH----H-HcCCCeEEecCCCCC----hHHHHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLKTA----K-EMGADATVLIDRNHS----LEEISTHIIEL  384 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~~~----~-~~ga~~~i~~~~~~~----~~~~~~~~~~~  384 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+. ++.+.+    + +.|....+-.-|..+    .+++++.+.++
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYR-VVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCE-EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            3578999999 99999999999999997 88889887 665433    2 345444444455556    66777666655


Q ss_pred             hc-CCCCceEEEcccch
Q psy1413         385 LQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       385 ~~-~~~~d~i~d~~g~~  400 (408)
                      .. ..++|++|+++|..
T Consensus       101 ~~~~g~iD~lvnnAG~~  117 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASAF  117 (288)
T ss_dssp             HHHHSCCCEEEECCCCC
T ss_pred             HHhcCCCCEEEECCCCC
Confidence            32 24799999999853

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.58  E-value=0.00027  Score=63.44  Aligned_cols=84  Identities=20%  Similarity=0.256  Sum_probs=60.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++| +.++.+.+    ++.+....+...|..+.+++.+.+.++.. ..
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAK-VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999 99999999999999997 888888 66655432    33354444444455566777776665532 23


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus        85 ~id~li~~Ag~~   96 (261)
T 1gee_A           85 KLDVMINNAGLE   96 (261)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.57  E-value=0.00043  Score=62.84  Aligned_cols=84  Identities=17%  Similarity=0.225  Sum_probs=62.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-------------ChhhHHH----HHHcCCCeEEecCCCCChHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-------------LEHKLKT----AKEMGADATVLIDRNHSLEEI  377 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-------------~~~~~~~----~~~~ga~~~i~~~~~~~~~~~  377 (408)
                      .++++||+|+ +++|..+++.+...|++ |+++++             +.++++.    +++.+....+..-|..+.+++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGAD-IIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            4678999999 99999999999999997 888877             4444433    234455555555666677778


Q ss_pred             HHHHHHHhc-CCCCceEEEcccch
Q psy1413         378 STHIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       378 ~~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      ++.+.++.. ..++|++|++.|..
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~  112 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVA  112 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCC
Confidence            777776543 24799999999864

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.57  E-value=0.00031  Score=62.46  Aligned_cols=84  Identities=23%  Similarity=0.228  Sum_probs=59.4

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcC-CCeEEecCCC--CChHHHHHHHHHHhc
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMG-ADATVLIDRN--HSLEEISTHIIELLQ  386 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~g-a~~~i~~~~~--~~~~~~~~~~~~~~~  386 (408)
                      -.++++||+|+ |++|..+++.+...|++ |++++|+.++++.+    ++.+ ....+...+.  .+.+++.+.+.++..
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGAS-VVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            35688999999 99999999999999997 99999998776543    3333 2222222222  455666666665532


Q ss_pred             -CCCCceEEEcccc
Q psy1413         387 -GEQPDKTIDCSGI  399 (408)
Q Consensus       387 -~~~~d~i~d~~g~  399 (408)
                       ..++|++|++.|.
T Consensus        91 ~~g~id~lv~nAg~  104 (247)
T 3i1j_A           91 EFGRLDGLLHNASI  104 (247)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             2479999999985

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.55  E-value=0.00037  Score=61.74  Aligned_cols=83  Identities=17%  Similarity=0.225  Sum_probs=59.6

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEE-EecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVI-TDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~-~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      +.++||+|+ |++|..+++.+...|++ |++ .+|+.++.+.+    ++.+....+...|..+.+++++.+.++.. ..+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCK-VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            367999999 99999999999999998 666 57877665433    33454444444555666777777766543 347


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        80 id~li~~Ag~~   90 (244)
T 1edo_A           80 IDVVVNNAGIT   90 (244)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.55  E-value=0.0003  Score=64.72  Aligned_cols=85  Identities=18%  Similarity=0.066  Sum_probs=58.2

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcC-CCeEEecCCCCCh-HHHHHHHHHHhc-
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMG-ADATVLIDRNHSL-EEISTHIIELLQ-  386 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~g-a~~~i~~~~~~~~-~~~~~~~~~~~~-  386 (408)
                      ..++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+ ....+..-|..+. +++++.+..+.. 
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIM-VVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            35678999999 99999999999999996 99999998775443    2223 2333333444454 555555544432 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      ..++|++|+++|..
T Consensus        89 ~g~iD~lv~nAg~~  102 (311)
T 3o26_A           89 FGKLDILVNNAGVA  102 (311)
T ss_dssp             HSSCCEEEECCCCC
T ss_pred             CCCCCEEEECCccc
Confidence            24799999999964

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.55  E-value=0.00044  Score=62.60  Aligned_cols=84  Identities=23%  Similarity=0.287  Sum_probs=61.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++++ .++.+.    +++.|........|..+.+++++.+.++.. ..
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAA-VALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999 99999999999999998 7766544 344433    344566655555666777888777776643 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus       109 ~iD~lvnnAg~~  120 (271)
T 3v2g_A          109 GLDILVNSAGIW  120 (271)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCcEEEECCCCC
Confidence            799999999863

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.55  E-value=0.00036  Score=62.16  Aligned_cols=84  Identities=20%  Similarity=0.168  Sum_probs=60.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC--CCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG--ADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++.  ....+-..|..+.+++.+.+.++.. ..++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAK-VMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            3578999999 99999999999999997 88899988776554 3333  2222333455566777766665432 2469


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|+++|..
T Consensus        84 d~li~~Ag~~   93 (251)
T 1zk4_A           84 STLVNNAGIA   93 (251)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999853

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.54  E-value=0.00039  Score=63.25  Aligned_cols=84  Identities=23%  Similarity=0.179  Sum_probs=61.3

Q ss_pred             CCCEEEEEec-ch--hHHHHHHHHHHhCCCeEEEEecCh--hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GP--IGLVTLLTARALGASRVVITDILE--HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~--~G~~~~~~~~~~Ga~~vv~~~~~~--~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |.  +|..+++.+...|++ |++++|+.  ++++.+.+.+....+...|..+.+++++.+.++.. ..+
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAE-LAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCE-EEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCE-EEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            4678999996 54  999999999999997 88888876  55555544332333334556667777777777643 357


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       104 id~li~nAg~~  114 (280)
T 3nrc_A          104 LDAIVHSIAFA  114 (280)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            99999999864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.54  E-value=0.00034  Score=62.78  Aligned_cols=83  Identities=12%  Similarity=0.108  Sum_probs=61.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHH---hCCCeEEEEecChhhHHHH-HHc-----CCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARA---LGASRVVITDILEHKLKTA-KEM-----GADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~---~Ga~~vv~~~~~~~~~~~~-~~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      ++++||+|+ |++|..+++.+..   .|++ |++++|+.++.+.+ +++     +....+-.-|..+.+++++.+.++..
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSV-MLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCE-EEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCe-EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            568999999 9999999999888   8997 89999998776544 222     44444444566667788888877753


Q ss_pred             ---CCCCc--eEEEcccch
Q psy1413         387 ---GEQPD--KTIDCSGIE  400 (408)
Q Consensus       387 ---~~~~d--~i~d~~g~~  400 (408)
                         .+++|  ++|++.|..
T Consensus        85 ~~~~g~~d~~~lvnnAg~~  103 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAATL  103 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCC
T ss_pred             ccccccCCccEEEECCccc
Confidence               23688  999999853

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.54  E-value=0.00031  Score=63.16  Aligned_cols=84  Identities=18%  Similarity=0.193  Sum_probs=61.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ +++|..+++.+...|++ |+++ .++.++.+.    +++.|....+...|..+.+++++.+.++.. ..
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGAN-VVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4678999999 99999999999999998 6666 555554433    344565555555666677777777776643 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        86 ~id~lv~nAg~~   97 (259)
T 3edm_A           86 EIHGLVHVAGGL   97 (259)
T ss_dssp             SEEEEEECCCCC
T ss_pred             CCCEEEECCCcc
Confidence            799999999854

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.54  E-value=0.00028  Score=64.06  Aligned_cols=84  Identities=19%  Similarity=0.148  Sum_probs=61.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+    ++.+....+...|..+.+++++.+.++.. ...
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGAD-VAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCE-EEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4678999999 99999999999999997 88888887655433    33465544444555666777777666432 246


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       112 id~li~~Ag~~  122 (279)
T 3ctm_A          112 IDVFVANAGVT  122 (279)
T ss_dssp             CSEEEECGGGS
T ss_pred             CCEEEECCccc
Confidence            99999999854

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.54  E-value=0.00015  Score=65.40  Aligned_cols=86  Identities=14%  Similarity=0.159  Sum_probs=59.3

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCC--CeEEEEecChhhHHHHHH---cCCCeEEecCCCCChHHHHHHHHHHhc--
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGA--SRVVITDILEHKLKTAKE---MGADATVLIDRNHSLEEISTHIIELLQ--  386 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga--~~vv~~~~~~~~~~~~~~---~ga~~~i~~~~~~~~~~~~~~~~~~~~--  386 (408)
                      -.+.++||+|+ |++|..+++.+...|+  .+|++++|+.++.+.+++   .+....+...|..+.+++.+.+.++..  
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            44578999999 9999999999999993  359999998765443332   244444334455556666666665532  


Q ss_pred             -CCCCceEEEcccch
Q psy1413         387 -GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 -~~~~d~i~d~~g~~  400 (408)
                       ..++|++|+++|..
T Consensus        99 g~~~id~li~~Ag~~  113 (267)
T 1sny_A           99 KDQGLNVLFNNAGIA  113 (267)
T ss_dssp             GGGCCSEEEECCCCC
T ss_pred             CCCCccEEEECCCcC
Confidence             12699999999854

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.54  E-value=0.00033  Score=62.25  Aligned_cols=84  Identities=18%  Similarity=0.287  Sum_probs=58.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ |+++ .++.++.+.    +++.+....+...|..+.+++++.+.++.. ..
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~-V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGAN-IVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3578999999 99999999999999997 7777 566555433    333465544445555666777776665532 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus        83 ~~d~vi~~Ag~~   94 (247)
T 2hq1_A           83 RIDILVNNAGIT   94 (247)
T ss_dssp             CCCEEEECC---
T ss_pred             CCCEEEECCCCC
Confidence            799999999864

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.54  E-value=0.00036  Score=64.98  Aligned_cols=82  Identities=20%  Similarity=0.178  Sum_probs=60.0

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-----hhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDIL-----EHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-----~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+     .++++.+    ++.+....+..-|..+.+++.+.+.++..
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~-V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHR-VYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            578999999 99999999999999998 8877664     3333333    33455555445566677777777776643


Q ss_pred             -CCCCceEEEcccc
Q psy1413         387 -GEQPDKTIDCSGI  399 (408)
Q Consensus       387 -~~~~d~i~d~~g~  399 (408)
                       ..++|++|+++|.
T Consensus        84 ~~g~iD~lVnnAG~   97 (324)
T 3u9l_A           84 EDGRIDVLIHNAGH   97 (324)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence             2479999999985

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.53  E-value=0.0003  Score=66.36  Aligned_cols=82  Identities=22%  Similarity=0.219  Sum_probs=58.7

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEE-ec-----CCCC---Ch---HHHHHHHHH
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV-LI-----DRNH---SL---EEISTHIIE  383 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i-~~-----~~~~---~~---~~~~~~~~~  383 (408)
                      ++.+++|+|+|.+|+.++++++.+|++ |++++++.++++.++++|++.+- +.     ....   +.   ..-.+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~-V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGAK-TTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTCE-EEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            568999999999999999999999996 99999999999999999986431 00     0000   00   011233444


Q ss_pred             HhcCCCCceEEEcccch
Q psy1413         384 LLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       384 ~~~~~~~d~i~d~~g~~  400 (408)
                      ..  +..|+||.++..+
T Consensus       262 ~l--~~aDIVI~tv~iP  276 (381)
T 3p2y_A          262 AI--TKFDIVITTALVP  276 (381)
T ss_dssp             HH--TTCSEEEECCCCT
T ss_pred             HH--hcCCEEEECCCCC
Confidence            43  5799999997543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.53  E-value=0.00024  Score=63.99  Aligned_cols=84  Identities=15%  Similarity=0.122  Sum_probs=60.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh---hhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE---HKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~---~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++++.   ++++.    +++.|....+...|..+.+++++.+.++.. 
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVN-LVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCE-EEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999 99999999999999998 77776543   33332    233355555555566677777777776643 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      ..++|++|+++|..
T Consensus        89 ~g~iD~lvnnAg~~  102 (262)
T 3ksu_A           89 FGKVDIAINTVGKV  102 (262)
T ss_dssp             HCSEEEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            24799999999853

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.53  E-value=0.00039  Score=61.94  Aligned_cols=84  Identities=23%  Similarity=0.281  Sum_probs=61.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ |++|..+++.+...|++ |+++++ +.++.+.    +++.|....+...|..+.+++++.+.++.. ..
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYN-VAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999999 99999999999999998 666665 4444433    344566655555666677777777776543 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        82 ~id~lv~nAg~~   93 (246)
T 3osu_A           82 SLDVLVNNAGIT   93 (246)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999864

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.53  E-value=0.00037  Score=63.01  Aligned_cols=85  Identities=16%  Similarity=0.112  Sum_probs=60.9

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      ..++++||+|+ +++|..+++.+...|++ |+++ .++.++.+.    +++.|.......-|..+.+++++.+.++.. .
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFT-VVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCE-EEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999 99999999999999998 6555 455554443    344565555555566677777777776643 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus       104 g~iD~lvnnAG~~  116 (267)
T 3u5t_A          104 GGVDVLVNNAGIM  116 (267)
T ss_dssp             SCEEEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.52  E-value=0.00026  Score=63.09  Aligned_cols=80  Identities=25%  Similarity=0.267  Sum_probs=57.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++++.+.++. ...+...|..+.+++++.+.+   ..++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~---~~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAK-VIATDINESKLQELEKYP-GIQTRVLDVTKKKQIDQFANE---VERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHGGGGGST-TEEEEECCTTCHHHHHHHHHH---CSCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHhcc-CceEEEeeCCCHHHHHHHHHH---hCCCCEEE
Confidence            3578999999 99999999999999997 888999887766544332 222223444455666533333   24799999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      +++|..
T Consensus        80 ~~Ag~~   85 (246)
T 2ag5_A           80 NVAGFV   85 (246)
T ss_dssp             ECCCCC
T ss_pred             ECCccC
Confidence            999853

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.52  E-value=0.00029  Score=63.51  Aligned_cols=84  Identities=20%  Similarity=0.115  Sum_probs=60.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHH-hCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARA-LGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~-~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+.. .|++ |++++|+.++.+.+    ++.+....+..-|..+.+++.+.+.++.. ..
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGD-VVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSE-EEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCe-EEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4578999999 9999999999998 8996 88899987765433    33354433334455566777776665532 23


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus        82 ~id~li~~Ag~~   93 (276)
T 1wma_A           82 GLDVLVNNAGIA   93 (276)
T ss_dssp             SEEEEEECCCCC
T ss_pred             CCCEEEECCccc
Confidence            799999999854

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.52  E-value=0.00011  Score=65.40  Aligned_cols=80  Identities=24%  Similarity=0.242  Sum_probs=59.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh--hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE--HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~--~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++.+++.  +..+.+++.|........|..+.+++++.+    ...++|+
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~-Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~----~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAE-VVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSF----TDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSS----TTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCE-EEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHH----HhCCCCE
Confidence            4688999999 99999999999999998 88888874  335666777866655555555545444433    2357999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      .+|+.|..
T Consensus        83 LVNNAGi~   90 (247)
T 4hp8_A           83 LVNNAGII   90 (247)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999864

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.51  E-value=0.00034  Score=64.06  Aligned_cols=84  Identities=12%  Similarity=0.023  Sum_probs=59.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe-cChhhHHHH-H----HcCCCeEEecCCCCChH-------------
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITD-ILEHKLKTA-K----EMGADATVLIDRNHSLE-------------  375 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~-~~~~~~~~~-~----~~ga~~~i~~~~~~~~~-------------  375 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++ |+.++.+.+ +    +.|....+...|..+.+             
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYA-VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            3578999999 99999999999999997 88888 887766543 2    33544443334444445             


Q ss_pred             ----HHHHHHHHHhc-CCCCceEEEcccch
Q psy1413         376 ----EISTHIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       376 ----~~~~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                          ++.+.+.++.. ..++|++|+++|..
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~  116 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSF  116 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence                66666555432 24799999999854

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.51  E-value=0.00031  Score=61.28  Aligned_cols=75  Identities=11%  Similarity=0.031  Sum_probs=54.4

Q ss_pred             CEEEEEec-chhHHHHHHHHH-HhCCCeEEEEecChh-hHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTAR-ALGASRVVITDILEH-KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~-~~Ga~~vv~~~~~~~-~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      +++||+|+ |++|..+++.+. ..|++ |++++|+.+ +.+.+.+.+....+..-|..+.+++.+.+      +++|++|
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------~~~d~vv   78 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMH-ITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAV------TNAEVVF   78 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCE-EEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHH------TTCSEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCce-EEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHH------cCCCEEE
Confidence            46999999 999999999988 89996 999999988 76665433433333334444455555444      2689999


Q ss_pred             Ecccc
Q psy1413         395 DCSGI  399 (408)
Q Consensus       395 d~~g~  399 (408)
                      ++.|.
T Consensus        79 ~~ag~   83 (221)
T 3r6d_A           79 VGAME   83 (221)
T ss_dssp             ESCCC
T ss_pred             EcCCC
Confidence            99985

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.50  E-value=0.00039  Score=62.93  Aligned_cols=85  Identities=19%  Similarity=0.177  Sum_probs=61.8

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      ..+.++||+|+ |++|..+++.+...|++ |+++ .++.++.+.+    ++.+....+...|..+.+++++.+.++.. .
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWR-VGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            45678999999 99999999999999998 5454 6776665433    33455555445566667777777776643 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus       103 g~id~li~nAg~~  115 (272)
T 4e3z_A          103 GRLDGLVNNAGIV  115 (272)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999854

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.50  E-value=0.00025  Score=63.55  Aligned_cols=87  Identities=17%  Similarity=0.101  Sum_probs=60.9

Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe-cChhhH----HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD-ILEHKL----KTAKEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~-~~~~~~----~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      ...+++++||+|+ |++|..+++.+...|++ |++++ ++.++.    +.+++.+....+...|..+.+++++.+.++..
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFR-VVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEE-EEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            3467789999999 99999999999999998 66665 544443    33445565555555566677777777776643


Q ss_pred             -CCCCceEEEcccch
Q psy1413         387 -GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 -~~~~d~i~d~~g~~  400 (408)
                       ..++|++|+++|..
T Consensus        88 ~~g~id~lv~~Ag~~  102 (256)
T 3ezl_A           88 EVGEIDVLVNNAGIT  102 (256)
T ss_dssp             HTCCEEEEEECCCCC
T ss_pred             hcCCCCEEEECCCCC
Confidence             34799999999854

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.49  E-value=0.00051  Score=63.01  Aligned_cols=84  Identities=19%  Similarity=0.148  Sum_probs=61.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh--hhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE--HKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~--~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++++.  ++.+    .+++.|....+...|..+.+++++.+.++.. .
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4689999999 99999999999999998 88887762  2232    2344566655555666677777777766543 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|+++++.|..
T Consensus       127 g~iD~lv~nAg~~  139 (294)
T 3r3s_A          127 GGLDILALVAGKQ  139 (294)
T ss_dssp             TCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCc
Confidence            4799999999863

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.48  E-value=0.00046  Score=62.90  Aligned_cols=83  Identities=24%  Similarity=0.225  Sum_probs=59.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCC-CeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGA-DATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga-~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++++.+    ++.|. ...+...|..+.+++.+.+.++.. ..
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAH-VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999 99999999999999997 99999998776543    33454 233334455556666666655432 24


Q ss_pred             CCceEEEc-ccc
Q psy1413         389 QPDKTIDC-SGI  399 (408)
Q Consensus       389 ~~d~i~d~-~g~  399 (408)
                      ++|++|++ .|.
T Consensus       106 ~iD~li~naag~  117 (286)
T 1xu9_A          106 GLDMLILNHITN  117 (286)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEECCccC
Confidence            79999998 453

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.48  E-value=0.00035  Score=63.31  Aligned_cols=82  Identities=23%  Similarity=0.218  Sum_probs=61.1

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      +++||+|+ |++|..+++.+...|++ |++++|+.++++.+ +++..  ...+-..|..+.+++++.+.++.. ..++|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWS-LVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            78999999 99999999999999997 88899998877654 33332  333334455667777777776533 247899


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|++.|..
T Consensus       101 lvnnAG~~  108 (272)
T 2nwq_A          101 LINNAGLA  108 (272)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999853

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.48  E-value=0.00033  Score=63.28  Aligned_cols=84  Identities=24%  Similarity=0.213  Sum_probs=60.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++| +.++.+.    +++.+....+...|..+.+++.+.+.++.. ..
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGAS-VVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4578999999 99999999999999997 888888 6655443    333465554444555666777776665532 23


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        99 ~~d~vi~~Ag~~  110 (274)
T 1ja9_A           99 GLDFVMSNSGME  110 (274)
T ss_dssp             CEEEEECCCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.47  E-value=0.00057  Score=61.31  Aligned_cols=84  Identities=18%  Similarity=0.279  Sum_probs=58.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-c---C-------CCeEEecCCCCChHHHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-M---G-------ADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~---g-------a~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+ +   |       ....+..-|..+.+++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGAT-VAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            3578999999 99999999999999997 8999999877665432 2   2       2222233445556677766666


Q ss_pred             Hhc-CCCC-ceEEEcccch
Q psy1413         384 LLQ-GEQP-DKTIDCSGIE  400 (408)
Q Consensus       384 ~~~-~~~~-d~i~d~~g~~  400 (408)
                      +.. ..++ |++|+++|..
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~  103 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGIT  103 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCC
T ss_pred             HHHHhCCCCeEEEECCCcC
Confidence            532 1356 9999999853

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.46  E-value=0.00019  Score=59.09  Aligned_cols=82  Identities=23%  Similarity=0.231  Sum_probs=58.5

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ..++.+++|+|+|.+|+.+++.++..|.+ |+++++++++.+.++ +.|... +..+. .+.    +.+.+. ...++|+
T Consensus        16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~-V~vid~~~~~~~~~~~~~g~~~-~~~d~-~~~----~~l~~~-~~~~ad~   87 (155)
T 2g1u_A           16 KQKSKYIVIFGCGRLGSLIANLASSSGHS-VVVVDKNEYAFHRLNSEFSGFT-VVGDA-AEF----ETLKEC-GMEKADM   87 (155)
T ss_dssp             -CCCCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCGGGGGGSCTTCCSEE-EESCT-TSH----HHHHTT-TGGGCSE
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHhcCCCcE-EEecC-CCH----HHHHHc-CcccCCE
Confidence            35668899999999999999999999985 999999998888776 667653 33221 121    222222 1247999


Q ss_pred             EEEcccchhhh
Q psy1413         393 TIDCSGIESTI  403 (408)
Q Consensus       393 i~d~~g~~~~~  403 (408)
                      +|.|++.....
T Consensus        88 Vi~~~~~~~~~   98 (155)
T 2g1u_A           88 VFAFTNDDSTN   98 (155)
T ss_dssp             EEECSSCHHHH
T ss_pred             EEEEeCCcHHH
Confidence            99999976543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.45  E-value=0.00058  Score=61.55  Aligned_cols=85  Identities=18%  Similarity=0.076  Sum_probs=60.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ |++|..+++.+...|++.++...++.++.+.    +++.+....+..-|..+.+++++.+.++.. ..+
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999 9999999999999999844555566555433    334455555555566677777777766533 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus       105 id~li~nAg~~  115 (267)
T 4iiu_A          105 WYGVVSNAGIA  115 (267)
T ss_dssp             CSEEEECCCCC
T ss_pred             ccEEEECCCCC
Confidence            99999999854

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.44  E-value=0.00044  Score=64.51  Aligned_cols=84  Identities=12%  Similarity=0.025  Sum_probs=59.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe-cChhhHHHHH-----HcCCCeEEecCCCCChH-------------
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITD-ILEHKLKTAK-----EMGADATVLIDRNHSLE-------------  375 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~-~~~~~~~~~~-----~~ga~~~i~~~~~~~~~-------------  375 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++ |+.++.+.+.     +.|....+..-|..+.+             
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~-Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYA-VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            4578999999 99999999999999997 88888 8877765432     33544433333444444             


Q ss_pred             ----HHHHHHHHHhc-CCCCceEEEcccch
Q psy1413         376 ----EISTHIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       376 ----~~~~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                          ++++.+.++.. ..++|++|+++|..
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~  153 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSF  153 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence                56665555432 24799999999863

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.44  E-value=0.00055  Score=62.83  Aligned_cols=84  Identities=18%  Similarity=0.156  Sum_probs=61.7

Q ss_pred             CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |  ++|..+++.+...|++ |++++|+++..+.+    ++.+... +...|..+.+++++.+.++.. .
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAE-VALTYLSETFKKRVDPLAESLGVKL-TVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHHHTCCE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhcCCeE-EEEcCCCCHHHHHHHHHHHHHHc
Confidence            4688999998 6  9999999999999998 88899887554433    3345433 334455667777777776643 2


Q ss_pred             CCCceEEEcccchh
Q psy1413         388 EQPDKTIDCSGIES  401 (408)
Q Consensus       388 ~~~d~i~d~~g~~~  401 (408)
                      .++|++|+++|...
T Consensus       107 g~iD~lVnnAG~~~  120 (296)
T 3k31_A          107 GSLDFVVHAVAFSD  120 (296)
T ss_dssp             SCCSEEEECCCCCC
T ss_pred             CCCCEEEECCCcCC
Confidence            47999999999653

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.43  E-value=0.00076  Score=61.79  Aligned_cols=85  Identities=21%  Similarity=0.141  Sum_probs=61.4

Q ss_pred             CCCCEEEEEec-ch--hHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         315 TLGSKVLITGA-GP--IGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       315 ~~~~~~lv~G~-G~--~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      -.++++||+|+ |+  +|..+++.+...|++ |++++|+++..+.+    ++.+. ..+...|..+.+++++.+.++.. 
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAE-LAFTYQGDALKKRVEPLAEELGA-FVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCE-EEEEECSHHHHHHHHHHHHHHTC-EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCC-ceEEECCCCCHHHHHHHHHHHHHh
Confidence            35688999998 76  999999999999998 88888886543332    33443 33334556667777777776643 


Q ss_pred             CCCCceEEEcccchh
Q psy1413         387 GEQPDKTIDCSGIES  401 (408)
Q Consensus       387 ~~~~d~i~d~~g~~~  401 (408)
                      ..++|++|+++|...
T Consensus       107 ~g~iD~lVnnAG~~~  121 (293)
T 3grk_A          107 WGKLDFLVHAIGFSD  121 (293)
T ss_dssp             TSCCSEEEECCCCCC
T ss_pred             cCCCCEEEECCccCC
Confidence            247999999999653

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.42  E-value=0.00065  Score=57.47  Aligned_cols=78  Identities=18%  Similarity=0.150  Sum_probs=58.7

Q ss_pred             CCEEEEEecchhHHHHHHHHHHh-CCCeEEEEecChhhHHHHHHcCCCeEE-ecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         317 GSKVLITGAGPIGLVTLLTARAL-GASRVVITDILEHKLKTAKEMGADATV-LIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~-Ga~~vv~~~~~~~~~~~~~~~ga~~~i-~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      +++++|+|.|.+|+.+++.++.. |.+ |+++++++++.+.+++.|...+. |..+    .+   .+.++++-.++|.+|
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~-V~vid~~~~~~~~~~~~g~~~~~gd~~~----~~---~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGKI-SLGIEIREEAAQQHRSEGRNVISGDATD----PD---FWERILDTGHVKLVL  110 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCSC-EEEEESCHHHHHHHHHTTCCEEECCTTC----HH---HHHTBCSCCCCCEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCCe-EEEEECCHHHHHHHHHCCCCEEEcCCCC----HH---HHHhccCCCCCCEEE
Confidence            45789999999999999999998 987 99999999999988888876543 2222    21   233332345799999


Q ss_pred             Ecccchhh
Q psy1413         395 DCSGIEST  402 (408)
Q Consensus       395 d~~g~~~~  402 (408)
                      .+++....
T Consensus       111 ~~~~~~~~  118 (183)
T 3c85_A          111 LAMPHHQG  118 (183)
T ss_dssp             ECCSSHHH
T ss_pred             EeCCChHH
Confidence            99986543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.41  E-value=0.00046  Score=61.12  Aligned_cols=82  Identities=22%  Similarity=0.208  Sum_probs=57.8

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHHH----HHcCCCeEE-ecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKTA----KEMGADATV-LIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~~----~~~ga~~~i-~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      +++||+|+ |++|..+++.+...|++ |+++ +|+.++.+.+    ++.+..... ...|..+.+++++.+.++.. ..+
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFA-LAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCE-EEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            57999999 99999999999999997 7766 7887765543    233544333 33455566777666665532 247


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        81 ~d~li~~Ag~~   91 (245)
T 2ph3_A           81 LDTLVNNAGIT   91 (245)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.40  E-value=0.0006  Score=61.15  Aligned_cols=84  Identities=18%  Similarity=0.211  Sum_probs=60.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHH-HH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLK-TA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+..+.+ .+    ++.+....+...|..+.+++++.+.++.. ..
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGAN-VAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEE-EEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            3568999999 99999999999999986 888888654432 22    22355444444555666777777766543 34


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|+++|..
T Consensus        92 ~id~li~~Ag~~  103 (265)
T 1h5q_A           92 PISGLIANAGVS  103 (265)
T ss_dssp             SEEEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            699999999853

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.40  E-value=0.0005  Score=61.99  Aligned_cols=77  Identities=18%  Similarity=0.154  Sum_probs=56.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++       +....+..-|..+.+++++.+.++.. ..++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSK-VIDLSIHDPG-------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESSCCC-------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEecCccc-------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3578999999 99999999999999997 8888887665       32223333445556777776666533 2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus        79 v~~Ag~~   85 (264)
T 2dtx_A           79 VNNAGIE   85 (264)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999853

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.39  E-value=0.00046  Score=61.12  Aligned_cols=78  Identities=18%  Similarity=0.176  Sum_probs=53.1

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~  394 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++  ..+++|+. .+ ..|..+ +++.+.+.++.. ..++|++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~-V~~~~r~~~~--~~~~~~~~-~~-~~D~~~-~~~~~~~~~~~~~~g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYR-VAIASRNPEE--AAQSLGAV-PL-PTDLEK-DDPKGLVKRALEALGGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCHH--HHHHHTCE-EE-ECCTTT-SCHHHHHHHHHHHHTSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHH--HHHhhCcE-EE-ecCCch-HHHHHHHHHHHHHcCCCCEEE
Confidence            468999999 99999999999999997 8889998766  33445622 22 223233 444444443321 24799999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      ++.|..
T Consensus        76 ~~Ag~~   81 (239)
T 2ekp_A           76 HAAAVN   81 (239)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
Confidence            999853

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.38  E-value=0.00089  Score=60.23  Aligned_cols=84  Identities=17%  Similarity=0.171  Sum_probs=60.1

Q ss_pred             CCCEEEEEec-ch--hHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCC-CeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA-GP--IGLVTLLTARALGASRVVITDILEHKLKTA----KEMGA-DATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~--~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga-~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+ |+  +|..+++.+...|++ |++++|+++..+.+    ++++. ...+-..|..+.+++++.+.++.. 
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGAR-LIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            4578999998 76  999999999999998 88888886544433    33343 333444555566777777766643 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      ..++|++++++|..
T Consensus        85 ~g~id~li~~Ag~~   98 (266)
T 3oig_A           85 VGVIHGIAHCIAFA   98 (266)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             hCCeeEEEEccccc
Confidence            24799999999864

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.38  E-value=0.00063  Score=64.99  Aligned_cols=87  Identities=22%  Similarity=0.087  Sum_probs=64.6

Q ss_pred             cCc-CCCCEEEEEec-chhHHHHHHHHHH-hCCCeEEEEecChhh----------------HHHHHHcCCCeEEecCCCC
Q psy1413         312 AGV-TLGSKVLITGA-GPIGLVTLLTARA-LGASRVVITDILEHK----------------LKTAKEMGADATVLIDRNH  372 (408)
Q Consensus       312 ~~~-~~~~~~lv~G~-G~~G~~~~~~~~~-~Ga~~vv~~~~~~~~----------------~~~~~~~ga~~~i~~~~~~  372 (408)
                      ..+ +.++++||+|+ +|+|+++++.+.. .|++ |++++++.++                .+.+++.|.....-.-|..
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~-Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGAD-TLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCE-EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCCE-EEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            344 45788999999 9999999999988 9998 8878776432                1445667766554455666


Q ss_pred             ChHHHHHHHHHHhc-C-CCCceEEEcccc
Q psy1413         373 SLEEISTHIIELLQ-G-EQPDKTIDCSGI  399 (408)
Q Consensus       373 ~~~~~~~~~~~~~~-~-~~~d~i~d~~g~  399 (408)
                      +.+++++.+.++.. . .++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            77777777777654 2 579999999886

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.37  E-value=0.00055  Score=61.26  Aligned_cols=78  Identities=14%  Similarity=0.091  Sum_probs=54.7

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH---HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK---EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~---~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      +++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.   +.|.+...-  +..+.+.+.+.+.+..  .++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~--g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHT-VACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAY--GQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCE-EEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHH--SCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHh--CCCCEE
Confidence            46899999 99999999999999997 888999887765443   335433322  3233444444444433  479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |++.|..
T Consensus        77 v~nAg~~   83 (254)
T 1zmt_A           77 VSNDIFA   83 (254)
T ss_dssp             EEECCCC
T ss_pred             EECCCcC
Confidence            9999864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.33  E-value=0.00073  Score=60.99  Aligned_cols=85  Identities=18%  Similarity=0.231  Sum_probs=59.9

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe-cChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITD-ILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~-~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      ..++++||+|+ |++|..+++.+...|++ |++++ ++.++.+.    .++.+....+..-|..+.+++++.+.++.. .
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMA-VAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45678999999 99999999999999998 77776 44444433    233454444445566667777777766543 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus       102 g~id~li~nAg~~  114 (269)
T 3gk3_A          102 GKVDVLINNAGIT  114 (269)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCcC
Confidence            4799999999854

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.32  E-value=0.00049  Score=61.60  Aligned_cols=76  Identities=20%  Similarity=0.168  Sum_probs=56.2

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~  394 (408)
                      ++++||+|+ |++|..+++.+...|++ |++++|+.++.+.       ..+-.-|..+.+++++.+.++.. ..++|++|
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~-------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADAGDK-VAITYRSGEPPEG-------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSCCCTT-------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHhhcc-------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999999 99999999999999997 8888888765432       12223344556777777766533 34799999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      ++.|..
T Consensus        93 ~nAg~~   98 (253)
T 2nm0_A           93 ANAGVT   98 (253)
T ss_dssp             EECSCC
T ss_pred             ECCCCC
Confidence            999864

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.31  E-value=0.0012  Score=62.67  Aligned_cols=85  Identities=25%  Similarity=0.109  Sum_probs=62.7

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHH-hCCCeEEEEecChhh----------------HHHHHHcCCCeEEecCCCCChHH
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARA-LGASRVVITDILEHK----------------LKTAKEMGADATVLIDRNHSLEE  376 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~-~Ga~~vv~~~~~~~~----------------~~~~~~~ga~~~i~~~~~~~~~~  376 (408)
                      ..++++||+|+ +|+|+.+++.+.. .|++ |++++++.++                .+.+++.|.....-..|..+.++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~-Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGAD-TLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCE-EEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCE-EEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            56788999999 9999999999988 9998 7777765332                12445567655544556667788


Q ss_pred             HHHHHHHHhc-CCCCceEEEcccch
Q psy1413         377 ISTHIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       377 ~~~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +++.+.++.. ..++|+++++.|..
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~  148 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASP  148 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccc
Confidence            8777777644 35799999999864

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.30  E-value=0.00039  Score=62.79  Aligned_cols=84  Identities=18%  Similarity=0.263  Sum_probs=60.0

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecChhh-HHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcC-C-
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILEHK-LKTA-KEMGADATVLIDRNHSLEEISTHIIELLQG-E-  388 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~-  388 (408)
                      .++++||+|+   |++|..+++.+...|++ |++++|+.++ ++.+ ++++....+...|..+.+++++.+.++... . 
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQ-LVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCE-EEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCE-EEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4578999984   89999999999999997 8888988765 3443 445543333344555667777777665431 2 


Q ss_pred             --CCceEEEcccch
Q psy1413         389 --QPDKTIDCSGIE  400 (408)
Q Consensus       389 --~~d~i~d~~g~~  400 (408)
                        ++|++|++.|..
T Consensus        85 ~~~iD~lv~nAg~~   98 (269)
T 2h7i_A           85 GNKLDGVVHSIGFM   98 (269)
T ss_dssp             TCCEEEEEECCCCC
T ss_pred             CCCceEEEECCccC
Confidence              799999999854

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.30  E-value=0.00055  Score=61.58  Aligned_cols=78  Identities=19%  Similarity=0.096  Sum_probs=57.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|+..+.     . ........|..+.+++++.+.++.. -.++|++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~~~~-----~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil   82 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQ-VLTTARARPEG-----L-PEELFVEADLTTKEGCAIVAEATRQRLGGVDVI   82 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCE-EEEEESSCCTT-----S-CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCE-EEEEECCchhC-----C-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999 99999999999999998 88888875421     1 1122223455566777777776643 3579999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      +++.|..
T Consensus        83 VnnAG~~   89 (261)
T 4h15_A           83 VHMLGGS   89 (261)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999853

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.30  E-value=0.00047  Score=60.80  Aligned_cols=75  Identities=23%  Similarity=0.254  Sum_probs=56.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+.++..++..+-    .   +.+.+..  +++|++|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~-V~~~~R~~~~~~~~~~~~~~~~~~~Dl----~---~~~~~~~--~~~D~vi   89 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHE-PVAMVRNEEQGPELRERGASDIVVANL----E---EDFSHAF--ASIDAVV   89 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHTTCSEEEECCT----T---SCCGGGG--TTCSEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCe-EEEEECChHHHHHHHhCCCceEEEccc----H---HHHHHHH--cCCCEEE
Confidence            4578999999 99999999999999986 999999999988877766623333222    1   2233333  3799999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      +++|..
T Consensus        90 ~~ag~~   95 (236)
T 3e8x_A           90 FAAGSG   95 (236)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
Confidence            999854

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.29  E-value=0.00078  Score=60.50  Aligned_cols=81  Identities=21%  Similarity=0.165  Sum_probs=58.4

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .+++||+|+ |++|..+++.+...|++ |++++++. +..+.+++    .+....+...|..+.+++.+.+.++.. ..+
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYS-VTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCE-EEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            478999999 99999999999999997 77776554 43443332    344444445566667777777776643 247


Q ss_pred             CceEEEccc
Q psy1413         390 PDKTIDCSG  398 (408)
Q Consensus       390 ~d~i~d~~g  398 (408)
                      +|++|+++|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999999

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.28  E-value=0.00036  Score=62.76  Aligned_cols=79  Identities=20%  Similarity=0.119  Sum_probs=58.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.     ....+...|..+.+++.+.+.++.. ..++|++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  100 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYR-VVATSRSIKPSAD-----PDIHTVAGDISKPETADRIVREGIERFGRIDSL  100 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSCCCCSS-----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChhhccc-----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            4678999999 99999999999999997 8889887654321     1233334455666777777766533 2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus       101 v~nAg~~  107 (260)
T 3un1_A          101 VNNAGVF  107 (260)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999854

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.28  E-value=0.00044  Score=65.69  Aligned_cols=48  Identities=35%  Similarity=0.504  Sum_probs=44.0

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCe
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADA  364 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~  364 (408)
                      ++.+++|+|+|.+|+.++++++.+|++ |++++++..+++.++++|++.
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~-V~v~D~~~~~l~~~~~~G~~~  236 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGAV-VSATDVRPAAKEQVASLGAKF  236 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSTTHHHHHHHTTCEE
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHcCCce
Confidence            568999999999999999999999996 999999999999999999763

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.27  E-value=0.00068  Score=61.25  Aligned_cols=80  Identities=20%  Similarity=0.181  Sum_probs=57.1

Q ss_pred             cCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         314 VTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       314 ~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      ...++++||+|+ |++|..+++.+...|++ |++++++.++..     +....+ ..|..+.+++.+.+.++.. ..++|
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~-----~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~iD   83 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAK-VVSVSLDEKSDV-----NVSDHF-KIDVTNEEEVKEAVEKTTKKYGRID   83 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCC--CT-----TSSEEE-ECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCchhcc-----CceeEE-EecCCCHHHHHHHHHHHHHHcCCCC
Confidence            456789999999 99999999999999998 888888765442     111222 2344556777777766543 24799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      ++|+++|..
T Consensus        84 ~lv~nAg~~   92 (269)
T 3vtz_A           84 ILVNNAGIE   92 (269)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCcC
Confidence            999999853

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.24  E-value=0.00084  Score=59.88  Aligned_cols=78  Identities=24%  Similarity=0.245  Sum_probs=56.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.+.    ++.+.  .....|..+.+++++.+.++.. ..++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~-V~~~~r~~~~----~~~~~--~~~~~D~~d~~~~~~~~~~~~~~~g~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAK-VTGFDQAFTQ----EQYPF--ATEVMDVADAAQVAQVCQRLLAETERLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCCCS----SCCSS--EEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCchhh----hcCCc--eEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3578999999 99999999999999997 8888887653    22342  2223445566777777766543 3479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus        79 v~~Ag~~   85 (250)
T 2fwm_X           79 VNAAGIL   85 (250)
T ss_dssp             EECCCCC
T ss_pred             EECCCcC
Confidence            9999853

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.23  E-value=0.0014  Score=58.91  Aligned_cols=86  Identities=19%  Similarity=0.218  Sum_probs=61.7

Q ss_pred             CcCCCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHh
Q psy1413         313 GVTLGSKVLITGA---GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       313 ~~~~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~  385 (408)
                      ....++++||+|+   +++|..+++.+...|++ |++++|++...+.+    ++.+... +...|..+.+++++.+.++.
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGSEL-VFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCC-EEEEecchhhHHHHHHHHHHcCCcE-EEECCCCCHHHHHHHHHHHH
Confidence            3467789999984   69999999999999997 88888875443333    3344322 33445566777877777764


Q ss_pred             c-CCCCceEEEcccch
Q psy1413         386 Q-GEQPDKTIDCSGIE  400 (408)
Q Consensus       386 ~-~~~~d~i~d~~g~~  400 (408)
                      . ..++|++|+++|..
T Consensus        88 ~~~g~id~lv~nAg~~  103 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFA  103 (271)
T ss_dssp             HHCSCEEEEEECCCCC
T ss_pred             HHcCCCCEEEECCccC
Confidence            3 34799999999864

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.23  E-value=0.0012  Score=58.76  Aligned_cols=75  Identities=21%  Similarity=0.116  Sum_probs=53.4

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      -.++++||+|+ |++|..+++.+...|++ |++++|+.+..   ++++....+  .|.  .+++++.+.++.   ++|++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~---~~~~~~~~~--~D~--~~~~~~~~~~~~---~iD~l   85 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAE-VTICARNEELL---KRSGHRYVV--CDL--RKDLDLLFEKVK---EVDIL   85 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHH---HHTCSEEEE--CCT--TTCHHHHHHHSC---CCSEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEcCCHHHH---HhhCCeEEE--eeH--HHHHHHHHHHhc---CCCEE
Confidence            45688999999 99999999999999997 88899887443   344522222  332  234555555442   79999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus        86 v~~Ag~~   92 (249)
T 1o5i_A           86 VLNAGGP   92 (249)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999853

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.21  E-value=0.00033  Score=61.92  Aligned_cols=76  Identities=17%  Similarity=0.204  Sum_probs=54.2

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC---CCCce
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG---EQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~---~~~d~  392 (408)
                      +.++||+|+ |++|..+++.+...|++ |++++|+.++.+     . ...+-..|..+.+++.+.+.++...   .++|+
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~-----~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYT-VLNIDLSANDQA-----D-SNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEE-EEEEESSCCTTS-----S-EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEecCccccc-----c-ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            467999999 99999999999999997 888998876532     1 1222233444456666666554321   47999


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      +|+++|.
T Consensus        76 lv~~Ag~   82 (236)
T 1ooe_A           76 VFCVAGG   82 (236)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999985

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.20  E-value=0.0014  Score=58.72  Aligned_cols=83  Identities=18%  Similarity=0.240  Sum_probs=58.0

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecChh---hHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILEH---KLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~~---~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+   |++|..+++.+...|++ |++++|+.+   ..+.+.+ .+. ..+...|..+.+++++.+.++.. .
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~l~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAE-VALSYQAERLRPEAEKLAEALGG-ALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCE-EEEEESCGGGHHHHHHHHHHTTC-CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCC-cEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3578999986   69999999999999997 888888865   3333322 343 22333455566777776665532 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|++.|..
T Consensus        85 g~iD~lv~~Ag~~   97 (261)
T 2wyu_A           85 GGLDYLVHAIAFA   97 (261)
T ss_dssp             SSEEEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999864

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.20  E-value=0.00033  Score=62.17  Aligned_cols=79  Identities=18%  Similarity=0.166  Sum_probs=55.9

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC---CCC
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG---EQP  390 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~---~~~  390 (408)
                      ..+.++||+|+ |++|..+++.+...|++ |++++|+.++.+     + ...+...|..+.+++++.+.++...   .++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~-----~-~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWW-VASIDVVENEEA-----S-ASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEESSCCTTS-----S-EEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCE-EEEEeCChhhcc-----C-CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            34678999999 99999999999999997 888998876532     1 1222233444456666666655331   479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++|+++|..
T Consensus        78 D~lv~~Ag~~   87 (241)
T 1dhr_A           78 DAILCVAGGW   87 (241)
T ss_dssp             EEEEECCCCC
T ss_pred             CEEEEccccc
Confidence            9999999853

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.20  E-value=0.0021  Score=51.67  Aligned_cols=76  Identities=16%  Similarity=0.153  Sum_probs=56.4

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ..+++|+|+|.+|+.+++.+...|.+ |+++++++++.+.+++.|...+. . +..+.+.    ++++ .-.++|.+|.+
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~~-V~~id~~~~~~~~~~~~~~~~~~-g-d~~~~~~----l~~~-~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGKK-VLAVDKSKEKIELLEDEGFDAVI-A-DPTDESF----YRSL-DLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTTCEEEE-C-CTTCHHH----HHHS-CCTTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHCCCcEEE-C-CCCCHHH----HHhC-CcccCCEEEEe
Confidence            35789999999999999999999997 99999999999988887764332 2 2222222    2232 33579999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      ++..
T Consensus        78 ~~~~   81 (141)
T 3llv_A           78 GSDD   81 (141)
T ss_dssp             CSCH
T ss_pred             cCCH
Confidence            9854

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.20  E-value=0.0014  Score=58.91  Aligned_cols=83  Identities=19%  Similarity=0.202  Sum_probs=58.7

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecCh---hhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhcC-
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILE---HKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQG-  387 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~---~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-  387 (408)
                      .++++||+|+   |++|..+++.+...|++ |++++|+.   +..+.+. +.+....+ ..|..+.+++++.+.++... 
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVL-QCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEE-ECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEcCcHHHHHHHHHHHHhcCCcEEE-EccCCCHHHHHHHHHHHHHHc
Confidence            4578999986   69999999999999997 88888876   2333332 23433333 34555667777777776542 


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|+++|..
T Consensus        86 g~iD~lv~~Ag~~   98 (265)
T 1qsg_A           86 PKFDGFVHSIGFA   98 (265)
T ss_dssp             SSEEEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4789999999854

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.17  E-value=0.00085  Score=65.46  Aligned_cols=82  Identities=24%  Similarity=0.298  Sum_probs=58.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh--H-HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc--CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK--L-KTAKEMGADATVLIDRNHSLEEISTHIIELLQ--GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~--~-~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~~  389 (408)
                      ++++|||+|+ |++|..+++++...|++ |+++++++..  + +..++.+...  ...|..+.+++++.+.++..  +..
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~-Vvl~~r~~~~~~l~~~~~~~~~~~--~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGAT-VVAIDVDGAAEDLKRVADKVGGTA--LTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEECGGGHHHHHHHHHHHTCEE--EECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCE-EEEEeCCccHHHHHHHHHHcCCeE--EEEecCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999 99999999999999997 8888886433  2 2334555432  23344555677776666543  234


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|++.|..
T Consensus       289 id~lV~nAGv~  299 (454)
T 3u0b_A          289 VDILVNNAGIT  299 (454)
T ss_dssp             CSEEEECCCCC
T ss_pred             ceEEEECCccc
Confidence            99999999864

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.15  E-value=0.002  Score=58.61  Aligned_cols=83  Identities=19%  Similarity=0.149  Sum_probs=58.0

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecChh---hHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILEH---KLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~~---~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+   |++|..+++.+...|++ |++++|+.+   ..+.+.+ .+....+ ..|..+.+++++.+.++.. .
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQ-LAFTYATPKLEKRVREIAKGFGSDLVV-KCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHHTTCCCEE-ECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEE-EcCCCCHHHHHHHHHHHHHHc
Confidence            4578999986   59999999999999997 888888865   3333322 3432222 3455566777777666543 3


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|++.|..
T Consensus        98 g~iD~lv~~Ag~~  110 (285)
T 2p91_A           98 GSLDIIVHSIAYA  110 (285)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999864

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.14  E-value=0.0012  Score=53.12  Aligned_cols=78  Identities=17%  Similarity=0.111  Sum_probs=58.2

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      ..+.++|.|.|.+|+.+++.++..|.+ |+++++++++.+.+++.|...+. . +..+ ++   .++++ +-..+|.++-
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~~-v~vid~~~~~~~~~~~~g~~~i~-g-d~~~-~~---~l~~a-~i~~ad~vi~   77 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDIP-LVVIETSRTRVDELRERGVRAVL-G-NAAN-EE---IMQLA-HLECAKWLIL   77 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTTCEEEE-S-CTTS-HH---HHHHT-TGGGCSEEEE
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHcCCCEEE-C-CCCC-HH---HHHhc-CcccCCEEEE
Confidence            346799999999999999999999997 99999999999999888876443 2 2112 22   22222 2347899999


Q ss_pred             cccchh
Q psy1413         396 CSGIES  401 (408)
Q Consensus       396 ~~g~~~  401 (408)
                      +++...
T Consensus        78 ~~~~~~   83 (140)
T 3fwz_A           78 TIPNGY   83 (140)
T ss_dssp             CCSCHH
T ss_pred             ECCChH
Confidence            988654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.13  E-value=0.0012  Score=58.82  Aligned_cols=76  Identities=17%  Similarity=0.244  Sum_probs=56.4

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      +.++++||+|+ |++|..+++.+...|++ |++++|+.++.+.       ..+.. +..+.+++++.+.++.. ..++|+
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~~~-------~~~~~-d~~d~~~v~~~~~~~~~~~g~iD~   90 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWN-TISIDFRENPNAD-------HSFTI-KDSGEEEIKSVIEKINSKSIKVDT   90 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCTTSS-------EEEEC-SCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCcccccc-------cceEE-EeCCHHHHHHHHHHHHHHcCCCCE
Confidence            44678999999 99999999999999998 9999998765431       11211 13456777777777654 347899


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      +|+++|.
T Consensus        91 li~~Ag~   97 (251)
T 3orf_A           91 FVCAAGG   97 (251)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999985

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.13  E-value=0.0015  Score=59.02  Aligned_cols=83  Identities=14%  Similarity=0.105  Sum_probs=58.3

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecChh---hHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILEH---KLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~~---~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+   |++|..+++.+...|++ |++++|+.+   ..+.+.+ .+....+ ..|..+.+++++.+.++.. .
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGAT-LAFTYLNESLEKRVRPIAQELNSPYVY-ELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEE-ECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEE-EcCCCCHHHHHHHHHHHHHHc
Confidence            3578999986   69999999999999997 888888865   3333332 3432222 3445566777777766543 3


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++|++.|..
T Consensus        83 g~id~lv~nAg~~   95 (275)
T 2pd4_A           83 GSLDFIVHSVAFA   95 (275)
T ss_dssp             SCEEEEEECCCCC
T ss_pred             CCCCEEEECCccC
Confidence            4799999999864

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.12  E-value=0.0014  Score=58.35  Aligned_cols=84  Identities=24%  Similarity=0.199  Sum_probs=57.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEE-EecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc---
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVI-TDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ---  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~-~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~---  386 (408)
                      .++++||+|+ +++|..+++.+...|++ |++ ..++.++.+.    +++.+........|..+.+++++.+.++..   
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            4688999999 99999999999999998 555 4566555433    334454444444455556666666555432   


Q ss_pred             ----CCCCceEEEcccch
Q psy1413         387 ----GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ----~~~~d~i~d~~g~~  400 (408)
                          ..++|++|+++|..
T Consensus        85 ~~~~~~~id~lv~nAg~~  102 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIG  102 (255)
T ss_dssp             HHHSSSCEEEEEECCCCC
T ss_pred             ccccCCcccEEEECCCCC
Confidence                23599999999853

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.12  E-value=0.0022  Score=60.13  Aligned_cols=80  Identities=21%  Similarity=0.283  Sum_probs=54.8

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHh-CCCeEEEEecChhhHHHHH-HcC-CCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARAL-GASRVVITDILEHKLKTAK-EMG-ADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~-Ga~~vv~~~~~~~~~~~~~-~~g-a~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      -.+.++||+|+ |.+|..+++.+... |..+|++++|++.+.+.+. ++. ....+..-|..+.+++.+.    .  +++
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~----~--~~~   92 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYA----L--EGV   92 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHH----T--TTC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHH----H--hcC
Confidence            34578999999 99999999999988 9866999999988776543 332 1222222333333443333    2  379


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |+||+++|..
T Consensus        93 D~Vih~Aa~~  102 (344)
T 2gn4_A           93 DICIHAAALK  102 (344)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999854

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.06  E-value=0.0022  Score=59.47  Aligned_cols=81  Identities=27%  Similarity=0.288  Sum_probs=55.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe---------cChhhHHH----HHHcCCCeEEecCCCCChHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITD---------ILEHKLKT----AKEMGADATVLIDRNHSLEEISTHI  381 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~---------~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~  381 (408)
                      .++++||+|+ |++|..+++.+...|++ |++.+         |+.++.+.    +++.+...+.|..+   .+++++.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~-Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~---~~~~~~~~   83 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGAL-VVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS---VEAGEKLV   83 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC---GGGHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC---HHHHHHHH
Confidence            4578999999 99999999999999997 77764         34444432    33445444555544   45555555


Q ss_pred             HHHhc-CCCCceEEEcccch
Q psy1413         382 IELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       382 ~~~~~-~~~~d~i~d~~g~~  400 (408)
                      .++.. ..++|++|++.|..
T Consensus        84 ~~~~~~~g~iD~lVnnAG~~  103 (319)
T 1gz6_A           84 KTALDTFGRIDVVVNNAGIL  103 (319)
T ss_dssp             HHHHHHTSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            44332 34799999999853

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.06  E-value=0.00075  Score=54.22  Aligned_cols=76  Identities=17%  Similarity=0.246  Sum_probs=53.7

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      .++++|+|+|.+|..+++.+...|.+ |+++++++++.+.+++.|.. ++.. +..+.+    .+.++ .-+++|+++.+
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~~-v~~~d~~~~~~~~~~~~~~~-~~~~-d~~~~~----~l~~~-~~~~~d~vi~~   77 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGHE-VLAVDINEEKVNAYASYATH-AVIA-NATEEN----ELLSL-GIRNFEYVIVA   77 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCC-CEEEESCHHHHHTTTTTCSE-EEEC-CTTCHH----HHHTT-TGGGCSEEEEC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhCCE-EEEe-CCCCHH----HHHhc-CCCCCCEEEEC
Confidence            35689999999999999999999986 88889988887776666653 3322 211222    22222 12479999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      ++..
T Consensus        78 ~~~~   81 (144)
T 2hmt_A           78 IGAN   81 (144)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            9864

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.05  E-value=0.0021  Score=57.75  Aligned_cols=84  Identities=25%  Similarity=0.253  Sum_probs=60.4

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecChhhH-----HHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILEHKL-----KTA-KEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-----~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      .++++||+|+   +++|..+++.+...|++ |++++++..+.     +.+ ++.+....+...|..+.+++++.+.++..
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAA-VAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCE-EEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCe-EEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            4678999986   49999999999999998 77777664332     222 23465555555666677777777777643


Q ss_pred             -CCCCceEEEcccch
Q psy1413         387 -GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 -~~~~d~i~d~~g~~  400 (408)
                       ..++|++|+++|..
T Consensus        98 ~~g~id~li~nAg~~  112 (267)
T 3gdg_A           98 DFGQIDAFIANAGAT  112 (267)
T ss_dssp             HTSCCSEEEECCCCC
T ss_pred             HcCCCCEEEECCCcC
Confidence             35799999999854

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.04  E-value=0.0015  Score=57.53  Aligned_cols=75  Identities=16%  Similarity=0.234  Sum_probs=54.5

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      +.++||+|+ |++|..+++.+...|++ |++++|+.+ .+   +  .  .+...|..+.+++.+.+.++....++|.+|+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~-~~---~--~--~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~   72 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYR-VVVLDLRRE-GE---D--L--IYVEGDVTREEDVRRAVARAQEEAPLFAVVS   72 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEESSCC-SS---S--S--EEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEccCcc-cc---c--e--EEEeCCCCCHHHHHHHHHHHHhhCCceEEEE
Confidence            468999999 99999999999999997 888888765 11   1  1  2223444556777777766522347999999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      ++|..
T Consensus        73 ~ag~~   77 (242)
T 1uay_A           73 AAGVG   77 (242)
T ss_dssp             CCCCC
T ss_pred             ccccc
Confidence            99853

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.03  E-value=0.00073  Score=60.02  Aligned_cols=76  Identities=18%  Similarity=0.138  Sum_probs=52.9

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEE-e--cChhhHHHH-HHc-CCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVIT-D--ILEHKLKTA-KEM-GADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~--~~~~~~~~~-~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      +++||+|+ |++|..+++.+...|++ |+++ +  |+.++++.+ +++ +.+ +.   +..+.+.+.+.+.+.  ..++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~r~~~~~~~~~~~~~~~~-~~---~~~~v~~~~~~~~~~--~g~iD   74 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYT-VVCHDASFADAAERQRFESENPGTI-AL---AEQKPERLVDATLQH--GEAID   74 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCE-EEECCGGGGSHHHHHHHHHHSTTEE-EC---CCCCGGGHHHHHGGG--SSCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCcCCHHHHHHHHHHhCCCc-cc---CHHHHHHHHHHHHHH--cCCCC
Confidence            57999999 99999999999999997 8888 6  888877655 334 432 22   222334443333332  24799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      ++|+++|..
T Consensus        75 ~lv~~Ag~~   83 (244)
T 1zmo_A           75 TIVSNDYIP   83 (244)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCcC
Confidence            999999854

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.01  E-value=0.0023  Score=59.61  Aligned_cols=80  Identities=20%  Similarity=0.230  Sum_probs=55.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHH----HHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLK----TAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~----~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      .+.++||+|+ |.+|..+++.+...|++ |++++|+.++.+    .+.+ .+....+..-|..+.+++.+.+.+    .+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYD-VVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCc-EEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc----cC
Confidence            4568999999 99999999999999997 888888654422    2222 243333334455556666666654    37


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++|+++|..
T Consensus        79 ~d~vih~A~~~   89 (341)
T 3enk_A           79 ITAAIHFAALK   89 (341)
T ss_dssp             CCEEEECCCCC
T ss_pred             CcEEEECcccc
Confidence            99999999854

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.00  E-value=0.0024  Score=61.24  Aligned_cols=88  Identities=22%  Similarity=0.111  Sum_probs=62.6

Q ss_pred             cCcCCCCEEEEEec-chhHHH--HHHHHHHhCCCeEEEEecChh---------------hH-HHHHHcCCCeEEecCCCC
Q psy1413         312 AGVTLGSKVLITGA-GPIGLV--TLLTARALGASRVVITDILEH---------------KL-KTAKEMGADATVLIDRNH  372 (408)
Q Consensus       312 ~~~~~~~~~lv~G~-G~~G~~--~~~~~~~~Ga~~vv~~~~~~~---------------~~-~~~~~~ga~~~i~~~~~~  372 (408)
                      .....++++||+|+ +|+|+.  +++.+...|++ |++++++..               .. +.+++.|.....-.-|..
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAH-TIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCE-EEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCE-EEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence            34567889999999 999998  66655566997 888877532               22 234556766555556667


Q ss_pred             ChHHHHHHHHHHhc-CCCCceEEEcccch
Q psy1413         373 SLEEISTHIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       373 ~~~~~~~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +.+++++.+.++.. ..++|++++++|..
T Consensus       134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence            77888888877754 35799999998864

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.99  E-value=0.00079  Score=62.74  Aligned_cols=82  Identities=13%  Similarity=0.048  Sum_probs=56.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh----HHHHHHc------CCCeEEecCCCCChHHHHHHHHHHh
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK----LKTAKEM------GADATVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~----~~~~~~~------ga~~~i~~~~~~~~~~~~~~~~~~~  385 (408)
                      ++++||+|+ |++|..+++.+...|++ ++++.++..+    .+.+++.      +....+..-|..+.+++.+.+.++.
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~-v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQ-SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTC-CEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCc-eEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            467999999 99999999999999998 6666554322    2223322      2333343455566777877777764


Q ss_pred             cCCCCceEEEcccch
Q psy1413         386 QGEQPDKTIDCSGIE  400 (408)
Q Consensus       386 ~~~~~d~i~d~~g~~  400 (408)
                       ..++|++|++.|..
T Consensus        81 -~g~iD~lVnnAG~~   94 (327)
T 1jtv_A           81 -EGRVDVLVCNAGLG   94 (327)
T ss_dssp             -TSCCSEEEECCCCC
T ss_pred             -cCCCCEEEECCCcC
Confidence             35799999999853

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.98  E-value=0.00067  Score=60.44  Aligned_cols=77  Identities=18%  Similarity=0.191  Sum_probs=55.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.  +  ..   -|..+.+++++.+.++.. ..++|++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~--~--~~---~D~~~~~~~~~~~~~~~~~~g~id~l   85 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHK-VAVTHRGSGAPKGLF--G--VE---VDVTDSDAVDRAFTAVEEHQGPVEVL   85 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSSCCCTTSE--E--EE---CCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHHhc--C--ee---ccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3578999999 99999999999999987 888888876544321  1  22   233445666666655432 2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |++.|..
T Consensus        86 v~~Ag~~   92 (247)
T 1uzm_A           86 VSNAGLS   92 (247)
T ss_dssp             EEECSCC
T ss_pred             EECCCCC
Confidence            9999864

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.97  E-value=0.0016  Score=55.94  Aligned_cols=74  Identities=23%  Similarity=0.247  Sum_probs=54.4

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ++||+|+ |++|..+++.+...   +|++++|+.++.+.+ ++++.  .+...|..+.+++.+.+.+   ..++|++|++
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~---~~~id~vi~~   73 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEE---AGPLDLLVHA   73 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHH---HCSEEEEEEC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHh---cCCCCEEEEC
Confidence            6899999 99999999887766   699999998877655 33443  3333455566777777665   2479999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +|..
T Consensus        74 ag~~   77 (207)
T 2yut_A           74 VGKA   77 (207)
T ss_dssp             CCCC
T ss_pred             CCcC
Confidence            9854

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.97  E-value=0.0029  Score=57.91  Aligned_cols=71  Identities=25%  Similarity=0.327  Sum_probs=54.0

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      -.+.+++|+|.|.+|+.+++.++.+|++ |++.+++.++.+.++++|+.. ++.      +++.+.    .  ...|+|+
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~-V~~~dr~~~~~~~~~~~g~~~-~~~------~~l~~~----l--~~aDvVi  218 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGAK-VKVGARESDLLARIAEMGMEP-FHI------SKAAQE----L--RDVDVCI  218 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHTTSEE-EEG------GGHHHH----T--TTCSEEE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCCE-EEEEECCHHHHHHHHHCCCee-cCh------hhHHHH----h--cCCCEEE
Confidence            3578999999999999999999999995 999999988877777778653 322      223222    2  3688888


Q ss_pred             Ecccc
Q psy1413         395 DCSGI  399 (408)
Q Consensus       395 d~~g~  399 (408)
                      .+++.
T Consensus       219 ~~~p~  223 (293)
T 3d4o_A          219 NTIPA  223 (293)
T ss_dssp             ECCSS
T ss_pred             ECCCh
Confidence            88763

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.96  E-value=0.0022  Score=56.76  Aligned_cols=74  Identities=16%  Similarity=0.065  Sum_probs=51.1

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHh--CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARAL--GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~--Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      ..++||+|+ |.+|..+++.+...  |.+ |++++|+.++.+.+ ..+.. ++ ..|..+.+++.+.+      +++|++
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~-V~~~~r~~~~~~~~-~~~~~-~~-~~D~~d~~~~~~~~------~~~d~v   73 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKFV-AKGLVRSAQGKEKI-GGEAD-VF-IGDITDADSINPAF------QGIDAL   73 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTCE-EEEEESCHHHHHHT-TCCTT-EE-ECCTTSHHHHHHHH------TTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCcE-EEEEEcCCCchhhc-CCCee-EE-EecCCCHHHHHHHH------cCCCEE
Confidence            468999999 99999999999998  665 88899987766543 11232 22 22333444444443      258999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus        74 i~~a~~~   80 (253)
T 1xq6_A           74 VILTSAV   80 (253)
T ss_dssp             EECCCCC
T ss_pred             EEecccc
Confidence            9999853

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.94  E-value=0.0054  Score=54.64  Aligned_cols=80  Identities=21%  Similarity=0.333  Sum_probs=53.4

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh-------------------hhHHHH----HHcCCC-eEEecCCCC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILE-------------------HKLKTA----KEMGAD-ATVLIDRNH  372 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~-------------------~~~~~~----~~~ga~-~~i~~~~~~  372 (408)
                      +.+++|+|+|++|..+++.+...|+.++.+++++.                   .|.+.+    +++..+ .+.......
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            46899999999999999999999999899998876                   555443    233222 222222212


Q ss_pred             ChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         373 SLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      +.+++.+.+      +++|+|++|+....+
T Consensus       111 ~~~~~~~~~------~~~DvVi~~~d~~~~  134 (249)
T 1jw9_B          111 DDAELAALI------AEHDLVLDCTDNVAV  134 (249)
T ss_dssp             CHHHHHHHH------HTSSEEEECCSSHHH
T ss_pred             CHhHHHHHH------hCCCEEEEeCCCHHH
Confidence            223333322      268999999987654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.93  E-value=0.0031  Score=58.61  Aligned_cols=79  Identities=24%  Similarity=0.268  Sum_probs=55.6

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH--HHHHHcC--CCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL--KTAKEMG--ADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~--~~~~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      +.++||+|+ |.+|..+++.+...|.+ |++++|+.++.  +.+++++  ....+..-|..+.+++.+.+...    ++|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d   77 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYE-VYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----QPD   77 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----CCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc----CCC
Confidence            468999999 99999999999999986 88898876543  2344443  12223233444556666666554    689


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +||+++|..
T Consensus        78 ~vih~A~~~   86 (345)
T 2z1m_A           78 EVYNLAAQS   86 (345)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCc
Confidence            999999853

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.92  E-value=0.00097  Score=58.30  Aligned_cols=65  Identities=11%  Similarity=-0.020  Sum_probs=51.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.+                -|..+.+++++.+.++   .++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~----------------~D~~~~~~v~~~~~~~---g~id~lv   64 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTI-VHVASRQTG----------------LDISDEKSVYHYFETI---GAFDHLI   64 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEE-EEEESGGGT----------------CCTTCHHHHHHHHHHH---CSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEecCCcc----------------cCCCCHHHHHHHHHHh---CCCCEEE
Confidence            3578999999 99999999999989997 888887655                2334456777777665   4799999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      ++.|..
T Consensus        65 ~nAg~~   70 (223)
T 3uce_A           65 VTAGSY   70 (223)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
Confidence            999854

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.92  E-value=0.00048  Score=62.21  Aligned_cols=77  Identities=22%  Similarity=0.192  Sum_probs=54.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ |++|..+++.+...|++ |++++|+.++.+..       .....|..+.+++.+.+.++.. ..++|++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~-V~~~~r~~~~~~~~-------~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l   98 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGAR-VAVADRAVAGIAAD-------LHLPGDLREAAYADGLPGAVAAGLGRLDIV   98 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEECSSCCTTSCCS-------EECCCCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHhh-------hccCcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4678999999 99999999999999997 88888876544321       1112344455666655555432 2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus        99 vnnAg~~  105 (266)
T 3uxy_A           99 VNNAGVI  105 (266)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999864

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.92  E-value=0.0031  Score=58.56  Aligned_cols=82  Identities=15%  Similarity=0.068  Sum_probs=53.8

Q ss_pred             cCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH--HHHHHc--CCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         314 VTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL--KTAKEM--GADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       314 ~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~--~~~~~~--ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      -+++.++||+|+ |.+|..+++.+...|.+ |++++|+..+.  +.++.+  +....+...|..+.+++.+.+...    
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   85 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYR-VHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA----   85 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc----
Confidence            367789999999 99999999999999986 88888876541  223333  122222233444556666666544    


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|+||+++|..
T Consensus        86 ~~d~Vih~A~~~   97 (335)
T 1rpn_A           86 QPQEVYNLAAQS   97 (335)
T ss_dssp             CCSEEEECCSCC
T ss_pred             CCCEEEECcccc
Confidence            689999999853

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.90  E-value=0.003  Score=58.19  Aligned_cols=75  Identities=17%  Similarity=0.263  Sum_probs=52.4

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC---hhhHHHH-HHc----CCC-eEEecCCCCChHHHHHHHHHHhc
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL---EHKLKTA-KEM----GAD-ATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~---~~~~~~~-~~~----ga~-~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      .++++||+|+|+.|..++..+...|+++|.+++|+   .++.+.+ +++    +.. .++++.+   .+++.+.+     
T Consensus       153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~---~~~l~~~l-----  224 (315)
T 3tnl_A          153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED---HEQLRKEI-----  224 (315)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC---HHHHHHHH-----
T ss_pred             cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch---HHHHHhhh-----
Confidence            46789999999999999999999999889999999   6665543 332    222 2344332   23333322     


Q ss_pred             CCCCceEEEcccc
Q psy1413         387 GEQPDKTIDCSGI  399 (408)
Q Consensus       387 ~~~~d~i~d~~g~  399 (408)
                       ..+|+||+|++.
T Consensus       225 -~~aDiIINaTp~  236 (315)
T 3tnl_A          225 -AESVIFTNATGV  236 (315)
T ss_dssp             -HTCSEEEECSST
T ss_pred             -cCCCEEEECccC
Confidence             258999999863

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.90  E-value=0.0036  Score=56.53  Aligned_cols=71  Identities=21%  Similarity=0.186  Sum_probs=52.6

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .+++++|+|+|+.|..++..+...|+++|.+++|+.+|.+.+ ++++.  ..+++.      +++.       . ..+|+
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~------~~l~-------~-~~~Di  184 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRY------EALE-------G-QSFDI  184 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECS------GGGT-------T-CCCSE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeH------HHhc-------c-cCCCE
Confidence            467899999999999999999999997799999999887655 55553  222322      2211       1 47899


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ||+|++..
T Consensus       185 vInaTp~g  192 (272)
T 3pwz_A          185 VVNATSAS  192 (272)
T ss_dssp             EEECSSGG
T ss_pred             EEECCCCC
Confidence            99998753

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.90  E-value=0.0025  Score=57.90  Aligned_cols=74  Identities=18%  Similarity=0.280  Sum_probs=52.5

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC----CeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA----DATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga----~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      .+++++|+|+|+.|..++..+...|+++|.+++|+.+|.+.+ ++++.    ..+.....    +++.+.+.      .+
T Consensus       126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~----~~l~~~l~------~~  195 (283)
T 3jyo_A          126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA----RGIEDVIA------AA  195 (283)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS----TTHHHHHH------HS
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH----HHHHHHHh------cC
Confidence            467899999999999999999999998899999998887654 33321    12222211    34444332      47


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |+||+|++.
T Consensus       196 DiVInaTp~  204 (283)
T 3jyo_A          196 DGVVNATPM  204 (283)
T ss_dssp             SEEEECSST
T ss_pred             CEEEECCCC
Confidence            999999863

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.89  E-value=0.0011  Score=60.43  Aligned_cols=74  Identities=16%  Similarity=0.228  Sum_probs=51.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc----CCCe-EEecCCCCChHHHHHHHHHHhcCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM----GADA-TVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~----ga~~-~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      .+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++    +... ..|..+   .+++.+.+      .
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~---~~~~~~~~------~  187 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD---DASRAEAV------K  187 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS---HHHHHHHT------T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC---HHHHHHHH------H
Confidence            5689999996 99999999999999998 99999998776544 222    3222 234322   33333332      2


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      .+|++|+++|.
T Consensus       188 ~~DvlVn~ag~  198 (287)
T 1lu9_A          188 GAHFVFTAGAI  198 (287)
T ss_dssp             TCSEEEECCCT
T ss_pred             hCCEEEECCCc
Confidence            48999999974

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.89  E-value=0.0024  Score=58.55  Aligned_cols=74  Identities=20%  Similarity=0.203  Sum_probs=54.5

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCC--eEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGAD--ATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~--~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .+.+++|+|+|+.|..++..+...|+++|++.+|+.+|.+.+ ++++..  .+++      .++    +.+..  ..+|+
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~------~~~----~~~~~--~~aDi  207 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS------LAE----AETRL--AEYDI  207 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC------HHH----HHHTG--GGCSE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee------HHH----HHhhh--ccCCE
Confidence            467899999999999999999999997799999998887655 556652  2222      122    22322  36899


Q ss_pred             EEEcccchh
Q psy1413         393 TIDCSGIES  401 (408)
Q Consensus       393 i~d~~g~~~  401 (408)
                      ||+|++...
T Consensus       208 vIn~t~~~~  216 (297)
T 2egg_A          208 IINTTSVGM  216 (297)
T ss_dssp             EEECSCTTC
T ss_pred             EEECCCCCC
Confidence            999998543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.86  E-value=0.002  Score=55.17  Aligned_cols=63  Identities=21%  Similarity=0.286  Sum_probs=48.2

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      ++||+|+ |++|..+++.+. .|++ |++++|+.+          ...   -|..+.+++++.+.+.   .++|++|+++
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~-V~~~~r~~~----------~~~---~D~~~~~~~~~~~~~~---~~~d~vi~~a   66 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAE-VITAGRHSG----------DVT---VDITNIDSIKKMYEQV---GKVDAIVSAT   66 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSE-EEEEESSSS----------SEE---CCTTCHHHHHHHHHHH---CCEEEEEECC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCe-EEEEecCcc----------cee---eecCCHHHHHHHHHHh---CCCCEEEECC
Confidence            6999999 999999999998 8987 888888764          112   2334456777777665   4789999999


Q ss_pred             cc
Q psy1413         398 GI  399 (408)
Q Consensus       398 g~  399 (408)
                      |.
T Consensus        67 g~   68 (202)
T 3d7l_A           67 GS   68 (202)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.86  E-value=0.0042  Score=62.80  Aligned_cols=82  Identities=24%  Similarity=0.253  Sum_probs=56.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh---------hhHH----HHHHcCCCeEEecCCCCChHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE---------HKLK----TAKEMGADATVLIDRNHSLEEISTHI  381 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~---------~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~  381 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++.+++.         ++++    .+++.|...+.|..+..+.+.+.+.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~-Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAK-VVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETA   85 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCE-EEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHH
Confidence            3578999999 99999999999999998 88877653         3333    33344655566666654444444444


Q ss_pred             HHHhcCCCCceEEEcccch
Q psy1413         382 IELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       382 ~~~~~~~~~d~i~d~~g~~  400 (408)
                      .+..  .++|+++++.|..
T Consensus        86 ~~~~--G~iDiLVnNAGi~  102 (604)
T 2et6_A           86 VKNF--GTVHVIINNAGIL  102 (604)
T ss_dssp             HHHH--SCCCEEEECCCCC
T ss_pred             HHHc--CCCCEEEECCCCC
Confidence            4433  4799999999963

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.84  E-value=0.0039  Score=57.24  Aligned_cols=71  Identities=27%  Similarity=0.304  Sum_probs=54.1

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      -.+.+++|+|.|.+|+.+++.++.+|++ |++.+++.++.+.++++|+. .++.      .++.+    +.  +..|+|+
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~-V~~~d~~~~~~~~~~~~g~~-~~~~------~~l~~----~l--~~aDvVi  220 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGAN-VKVGARSSAHLARITEMGLV-PFHT------DELKE----HV--KDIDICI  220 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHTTCE-EEEG------GGHHH----HS--TTCSEEE
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHCCCe-EEch------hhHHH----Hh--hCCCEEE
Confidence            3568999999999999999999999995 99999998887777777764 3332      22322    22  3689999


Q ss_pred             Ecccc
Q psy1413         395 DCSGI  399 (408)
Q Consensus       395 d~~g~  399 (408)
                      .+++.
T Consensus       221 ~~~p~  225 (300)
T 2rir_A          221 NTIPS  225 (300)
T ss_dssp             ECCSS
T ss_pred             ECCCh
Confidence            98874

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.82  E-value=0.0013  Score=57.48  Aligned_cols=73  Identities=23%  Similarity=0.223  Sum_probs=50.8

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      .++||+|+ |.+|..+++.+...|.+ |++++|+.++.+.+.   ....+...|..+.+++.+.+      +++|+||++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~------~~~d~vi~~   74 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFE-VTAVVRHPEKIKIEN---EHLKVKKADVSSLDEVCEVC------KGADAVISA   74 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCE-EEEECSCGGGCCCCC---TTEEEECCCTTCHHHHHHHH------TTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCE-EEEEEcCcccchhcc---CceEEEEecCCCHHHHHHHh------cCCCEEEEe
Confidence            57999999 99999999999999976 999999877654321   22222233434445554444      268999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +|..
T Consensus        75 a~~~   78 (227)
T 3dhn_A           75 FNPG   78 (227)
T ss_dssp             CCC-
T ss_pred             CcCC
Confidence            8754

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.82  E-value=0.0009  Score=60.29  Aligned_cols=70  Identities=17%  Similarity=0.276  Sum_probs=50.6

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      +++||+|+ |++|..+++.+...|++ |++++|++.+.+     +....+..-|..+.+++.+.+.      ++|++|++
T Consensus         4 k~vlVTGasg~IG~~la~~L~~~G~~-V~~~~r~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~------~~D~vi~~   71 (267)
T 3rft_A            4 KRLLVTGAAGQLGRVMRERLAPMAEI-LRLADLSPLDPA-----GPNEECVQCDLADANAVNAMVA------GCDGIVHL   71 (267)
T ss_dssp             EEEEEESTTSHHHHHHHHHTGGGEEE-EEEEESSCCCCC-----CTTEEEEECCTTCHHHHHHHHT------TCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCE-EEEEecCCcccc-----CCCCEEEEcCCCCHHHHHHHHc------CCCEEEEC
Confidence            57999999 99999999999999986 888988876543     3333333344444555554442      68999999


Q ss_pred             ccc
Q psy1413         397 SGI  399 (408)
Q Consensus       397 ~g~  399 (408)
                      .|.
T Consensus        72 Ag~   74 (267)
T 3rft_A           72 GGI   74 (267)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            885

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.81  E-value=0.0024  Score=59.32  Aligned_cols=80  Identities=18%  Similarity=0.110  Sum_probs=52.9

Q ss_pred             cCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHc-----CCCeEEe-cCCCCChHHHHHHHHHHhc
Q psy1413         314 VTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEM-----GADATVL-IDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       314 ~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~-----ga~~~i~-~~~~~~~~~~~~~~~~~~~  386 (408)
                      ...+.++||+|+ |.+|..+++.+...|.+ |++++|+.++.+.+.+.     +....+. ..|..+.+++.+.+     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-----   81 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYK-VRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI-----   81 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCE-EEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH-----
Confidence            345678999999 99999999999999986 88899987766544321     2222222 22322333332222     


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                       +++|+||+++|..
T Consensus        82 -~~~d~vih~A~~~   94 (342)
T 1y1p_A           82 -KGAAGVAHIASVV   94 (342)
T ss_dssp             -TTCSEEEECCCCC
T ss_pred             -cCCCEEEEeCCCC
Confidence             2799999998753

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.77  E-value=0.00097  Score=58.01  Aligned_cols=71  Identities=20%  Similarity=0.179  Sum_probs=49.0

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCC-hHHHHHHHHHHhcCCCCceEEEc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHS-LEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~-~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ++||+|+ |.+|..+++.+...|.+ |++++|+.++.+.+  .+. .++ .-|..+ .+++    .++.  +++|+||++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~--~~~-~~~-~~D~~d~~~~~----~~~~--~~~d~vi~~   70 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQ-IYAGARKVEQVPQY--NNV-KAV-HFDVDWTPEEM----AKQL--HGMDAIINV   70 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCE-EEEEESSGGGSCCC--TTE-EEE-ECCTTSCHHHH----HTTT--TTCSEEEEC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCccchhhc--CCc-eEE-EecccCCHHHH----HHHH--cCCCEEEEC
Confidence            5899999 99999999999999976 99999988765432  122 222 223233 3333    3333  369999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +|..
T Consensus        71 ag~~   74 (219)
T 3dqp_A           71 SGSG   74 (219)
T ss_dssp             CCCT
T ss_pred             CcCC
Confidence            9864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.77  E-value=0.0023  Score=57.84  Aligned_cols=74  Identities=20%  Similarity=0.239  Sum_probs=52.3

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .+.+++|+|+|++|..+++.+...|+ +|++++|+.++.+.+ ++++....++..+   .+++       .. .++|+++
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~---~~~~-------~~-~~~DivV  185 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS---MDEL-------EG-HEFDLII  185 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC---SGGG-------TT-CCCSEEE
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec---HHHh-------cc-CCCCEEE
Confidence            46789999999999999999999996 599999998887554 5555311112111   1111       11 5799999


Q ss_pred             Ecccchh
Q psy1413         395 DCSGIES  401 (408)
Q Consensus       395 d~~g~~~  401 (408)
                      +++|...
T Consensus       186 n~t~~~~  192 (271)
T 1nyt_A          186 NATSSGI  192 (271)
T ss_dssp             ECCSCGG
T ss_pred             ECCCCCC
Confidence            9998654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.76  E-value=0.0033  Score=58.97  Aligned_cols=78  Identities=19%  Similarity=0.229  Sum_probs=53.4

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc--CCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM--GADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~--ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      +.++||+|+ |.+|..+++.+...|.+ |++++|+..+.+.+ +.+  +....+..-|..+.+++.+.+...    ++|+
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d~   83 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGAT-VKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF----QPEI   83 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH----CCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCe-EEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc----CCCE
Confidence            468999999 99999999999999986 88898876554322 221  212222233444556666666544    6899


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      ||+++|.
T Consensus        84 vih~A~~   90 (357)
T 1rkx_A           84 VFHMAAQ   90 (357)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            9999984

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.75  E-value=0.0024  Score=62.07  Aligned_cols=72  Identities=21%  Similarity=0.301  Sum_probs=53.7

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      -.+++++|+|+|++|+.+++.++.+|++ |+++++++.+.+.+...|++. .+.      ++       +  -..+|+++
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~-Viv~D~~~~~a~~Aa~~g~dv-~~l------ee-------~--~~~aDvVi  325 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGAR-VIVTEIDPICALQATMEGLQV-LTL------ED-------V--VSEADIFV  325 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHTTCEE-CCG------GG-------T--TTTCSEEE
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHhCCcc-CCH------HH-------H--HHhcCEEE
Confidence            4678999999999999999999999996 999999988887777766531 111      11       1  23578888


Q ss_pred             Ecccchhhh
Q psy1413         395 DCSGIESTI  403 (408)
Q Consensus       395 d~~g~~~~~  403 (408)
                      +++|....+
T Consensus       326 ~atG~~~vl  334 (488)
T 3ond_A          326 TTTGNKDII  334 (488)
T ss_dssp             ECSSCSCSB
T ss_pred             eCCCChhhh
Confidence            887765544

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.72  E-value=0.00086  Score=59.56  Aligned_cols=78  Identities=13%  Similarity=0.158  Sum_probs=48.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHH--HHHHHHHh-cCCCCce
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEI--STHIIELL-QGEQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~--~~~~~~~~-~~~~~d~  392 (408)
                      ++++||+|+ |++|..+++.+.. |++ |++++|+.++.+.+.+......+. .+   ..+.  .+.+.+.. .-.++|+
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~~-v~~~~r~~~~~~~~~~~~~~~~~~-~D---~~~~~~~~~~~~~~~~~~~id~   78 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DHI-VYALGRNPEHLAALAEIEGVEPIE-SD---IVKEVLEEGGVDKLKNLDHVDT   78 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TSE-EEEEESCHHHHHHHHTSTTEEEEE-CC---HHHHHHTSSSCGGGTTCSCCSE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CCe-EEEEeCCHHHHHHHHhhcCCccee-cc---cchHHHHHHHHHHHHhcCCCCE
Confidence            578999999 9999999998866 876 899999988887776533222222 22   1221  11111111 1247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +|+++|..
T Consensus        79 lv~~Ag~~   86 (245)
T 3e9n_A           79 LVHAAAVA   86 (245)
T ss_dssp             EEECC---
T ss_pred             EEECCCcC
Confidence            99999864

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.70  E-value=0.0055  Score=56.03  Aligned_cols=74  Identities=22%  Similarity=0.194  Sum_probs=50.6

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-------hhHHHHH---HcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILE-------HKLKTAK---EMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-------~~~~~~~---~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      .+++|+|+ |.+|..+++.+...|.+ |++++|+.       ++.+.++   ..|+..+  .-|..+.+++.+.+     
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v--~~D~~d~~~l~~~~-----   74 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGNP-TYALVRKTITAANPETKEELIDNYQSLGVILL--EGDINDHETLVKAI-----   74 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTCC-EEEEECCSCCSSCHHHHHHHHHHHHHTTCEEE--ECCTTCHHHHHHHH-----
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCCc-EEEEECCCcccCChHHHHHHHHHHHhCCCEEE--EeCCCCHHHHHHHH-----
Confidence            46999999 99999999999999976 88888876       5544333   3454322  22333344444333     


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                       +++|.||+++|..
T Consensus        75 -~~~d~vi~~a~~~   87 (307)
T 2gas_A           75 -KQVDIVICAAGRL   87 (307)
T ss_dssp             -TTCSEEEECSSSS
T ss_pred             -hCCCEEEECCccc
Confidence             2699999998853

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.68  E-value=0.0028  Score=58.89  Aligned_cols=80  Identities=13%  Similarity=0.183  Sum_probs=53.7

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHH-HHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLK-TAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      -.+.++||+|+ |.+|..+++.+...|.+ |++++|+..+.. .++++. ...+...|..+.+++.+.+.+.    ++|+
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~l~-~v~~~~~Dl~d~~~~~~~~~~~----~~D~   91 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHE-ILVIDNFATGKREVLPPVA-GLSVIEGSVTDAGLLERAFDSF----KPTH   91 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCE-EEEEECCSSSCGGGSCSCT-TEEEEECCTTCHHHHHHHHHHH----CCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCCccchhhhhccC-CceEEEeeCCCHHHHHHHHhhc----CCCE
Confidence            34468999999 99999999999999986 888888644322 112221 1222233444556666666554    7999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ||+++|..
T Consensus        92 vih~A~~~   99 (330)
T 2pzm_A           92 VVHSAAAY   99 (330)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccC
Confidence            99999854

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.66  E-value=0.0064  Score=54.63  Aligned_cols=45  Identities=20%  Similarity=0.219  Sum_probs=39.4

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGA  362 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga  362 (408)
                      +++++|+|+|+.|..++..+...| .+|.++.|+.+|.+.+.++|.
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~ka~~la~~~~  162 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSSRGLDFFQRLGC  162 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTTHHHHHHHTC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHCCC
Confidence            789999999999999999999999 669999999988876557763

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.65  E-value=0.0034  Score=53.61  Aligned_cols=74  Identities=24%  Similarity=0.267  Sum_probs=50.3

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      .+++|+|+ |.+|..+++.+...|.+ |++++|+.++.+.+...+. .++ ..|..+.+++.+.+      +++|++|++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~-~~~-~~D~~~~~~~~~~~------~~~d~vi~~   74 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYE-VTVLVRDSSRLPSEGPRPA-HVV-VGDVLQAADVDKTV------AGQDAVIVL   74 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCGGGSCSSSCCCS-EEE-ESCTTSHHHHHHHH------TTCSEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEEeChhhcccccCCce-EEE-EecCCCHHHHHHHH------cCCCEEEEC
Confidence            57999999 99999999999999976 8889998776543211122 222 23333444444433      258999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +|..
T Consensus        75 a~~~   78 (206)
T 1hdo_A           75 LGTR   78 (206)
T ss_dssp             CCCT
T ss_pred             ccCC
Confidence            9854

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.64  E-value=0.0037  Score=54.11  Aligned_cols=70  Identities=23%  Similarity=0.217  Sum_probs=48.9

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      ++||+|+ |.+|..+++.+...|.+ |++++|+.++.+.+. .+.. ++.. |..+.++      +..  .++|++|+++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~-~~~~-~~~~-D~~d~~~------~~~--~~~d~vi~~a   69 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHE-VTAIVRNAGKITQTH-KDIN-ILQK-DIFDLTL------SDL--SDQNVVVDAY   69 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCSHHHHHHC-SSSE-EEEC-CGGGCCH------HHH--TTCSEEEECC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCE-EEEEEcCchhhhhcc-CCCe-EEec-cccChhh------hhh--cCCCEEEECC
Confidence            5899999 99999999999999976 999999988776554 2333 2221 2111122      222  3689999999


Q ss_pred             cch
Q psy1413         398 GIE  400 (408)
Q Consensus       398 g~~  400 (408)
                      |..
T Consensus        70 g~~   72 (221)
T 3ew7_A           70 GIS   72 (221)
T ss_dssp             CSS
T ss_pred             cCC
Confidence            864

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.63  E-value=0.0076  Score=56.29  Aligned_cols=76  Identities=25%  Similarity=0.218  Sum_probs=53.6

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh----hhHHHHH---HcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILE----HKLKTAK---EMGADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~----~~~~~~~---~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      .++||+|+ |.+|..+++.+...|.+ |++++|+.    ++.+.++   ..++..+  .-|..+.+++.+.+++    .+
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~~~~~~~l~~~~v~~~--~~Dl~d~~~l~~~~~~----~~   83 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRP-TYILARPGPRSPSKAKIFKALEDKGAIIV--YGLINEQEAMEKILKE----HE   83 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHHHHHHTTCEEE--ECCTTCHHHHHHHHHH----TT
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCC-EEEEECCCCCChhHHHHHHHHHhCCcEEE--EeecCCHHHHHHHHhh----CC
Confidence            57999999 99999999999999976 88888876    4544333   3344332  2333445666665543    37


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|+||++++..
T Consensus        84 ~d~Vi~~a~~~   94 (346)
T 3i6i_A           84 IDIVVSTVGGE   94 (346)
T ss_dssp             CCEEEECCCGG
T ss_pred             CCEEEECCchh
Confidence            99999999863

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.60  E-value=0.0088  Score=55.71  Aligned_cols=78  Identities=23%  Similarity=0.246  Sum_probs=52.2

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh----------hhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHh
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILE----------HKLKTAKE-MGADATVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~----------~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~  385 (408)
                      .++||+|+ |.+|..+++.+...|.+ |++++|+.          +..+.+++ .+....+..-|..+.+++.+.+.+  
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--   79 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYL-PVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--   79 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCC-EEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCE-EEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh--
Confidence            57999999 99999999999999987 88887643          22333333 233222223344455566655544  


Q ss_pred             cCCCCceEEEcccch
Q psy1413         386 QGEQPDKTIDCSGIE  400 (408)
Q Consensus       386 ~~~~~d~i~d~~g~~  400 (408)
                        .++|+||+++|..
T Consensus        80 --~~~d~vih~A~~~   92 (348)
T 1ek6_A           80 --YSFMAVIHFAGLK   92 (348)
T ss_dssp             --CCEEEEEECCSCC
T ss_pred             --cCCCEEEECCCCc
Confidence              2799999999854

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.58  E-value=0.0088  Score=54.79  Aligned_cols=74  Identities=22%  Similarity=0.215  Sum_probs=50.1

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-----hhhHHHHHH---cCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDIL-----EHKLKTAKE---MGADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-----~~~~~~~~~---~ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      .+++|+|+ |.+|..+++.+...|.+ |++++|+     .++.+.+++   .++. ++ .-|..+.+++.+.+      +
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~-~~D~~d~~~l~~~~------~   75 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRPEVVSNIDKVQMLLYFKQLGAK-LI-EASLDDHQRLVDAL------K   75 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCSCCSSCHHHHHHHHHHHTTTCE-EE-CCCSSCHHHHHHHH------T
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCc-EEEEECCCcccchhHHHHHHHHHhCCeE-EE-eCCCCCHHHHHHHH------h
Confidence            56999999 99999999999999976 8888887     344444332   2332 22 23333444444433      2


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|.||++++..
T Consensus        76 ~~d~vi~~a~~~   87 (313)
T 1qyd_A           76 QVDVVISALAGG   87 (313)
T ss_dssp             TCSEEEECCCCS
T ss_pred             CCCEEEECCccc
Confidence            699999998854

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.57  E-value=0.0041  Score=57.29  Aligned_cols=77  Identities=16%  Similarity=0.082  Sum_probs=52.0

Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ...+..++||+|+ |.+|..+++.+...|.+ |++++|+..+ +.   ++.  .+...|..+.+++.+.+..    .++|
T Consensus         8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~-~~---l~~--~~~~~Dl~d~~~~~~~~~~----~~~d   76 (321)
T 2pk3_A            8 HHHGSMRALITGVAGFVGKYLANHLTEQNVE-VFGTSRNNEA-KL---PNV--EMISLDIMDSQRVKKVISD----IKPD   76 (321)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCTTC-CC---TTE--EEEECCTTCHHHHHHHHHH----HCCS
T ss_pred             cccCcceEEEECCCChHHHHHHHHHHHCCCE-EEEEecCCcc-cc---cee--eEEECCCCCHHHHHHHHHh----cCCC
Confidence            4567789999999 99999999999999986 8889887655 21   222  2223344455666665544    3689


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +||+++|..
T Consensus        77 ~vih~A~~~   85 (321)
T 2pk3_A           77 YIFHLAAKS   85 (321)
T ss_dssp             EEEECCSCC
T ss_pred             EEEEcCccc
Confidence            999999854

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.57  E-value=0.0098  Score=55.50  Aligned_cols=77  Identities=19%  Similarity=0.178  Sum_probs=50.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh----hHHHHHHcC-----CCeEEecCCCCChHHHHHHHHHHh
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH----KLKTAKEMG-----ADATVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~----~~~~~~~~g-----a~~~i~~~~~~~~~~~~~~~~~~~  385 (408)
                      .+.++||+|+ |.+|..+++.+...|.+ |++++|+..    ..+.+++..     ....+..-|..+.+++.+.+    
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQV-VIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM----   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT----
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh----
Confidence            3578999999 99999999999999986 888888543    233333321     12222223333444443333    


Q ss_pred             cCCCCceEEEcccc
Q psy1413         386 QGEQPDKTIDCSGI  399 (408)
Q Consensus       386 ~~~~~d~i~d~~g~  399 (408)
                        +++|+||++++.
T Consensus        99 --~~~d~Vih~A~~  110 (351)
T 3ruf_A           99 --KGVDHVLHQAAL  110 (351)
T ss_dssp             --TTCSEEEECCCC
T ss_pred             --cCCCEEEECCcc
Confidence              279999999985

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.56  E-value=0.0019  Score=56.96  Aligned_cols=76  Identities=13%  Similarity=0.116  Sum_probs=51.7

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      .++||+|+ |++|..+++.+...|..+|++++|+.++.+.+...++  .+..-|..+.+++.+.+      +++|++|++
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~--~~~~~Dl~d~~~~~~~~------~~~D~vv~~   95 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNS--QIIMGDVLNHAALKQAM------QGQDIVYAN   95 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTE--EEEECCTTCHHHHHHHH------TTCSEEEEE
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCc--EEEEecCCCHHHHHHHh------cCCCEEEEc
Confidence            57999999 9999999999999993349999998876543322222  22233434445554444      268999998


Q ss_pred             ccchh
Q psy1413         397 SGIES  401 (408)
Q Consensus       397 ~g~~~  401 (408)
                      .|...
T Consensus        96 a~~~~  100 (236)
T 3qvo_A           96 LTGED  100 (236)
T ss_dssp             CCSTT
T ss_pred             CCCCc
Confidence            88643

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.54  E-value=0.0024  Score=64.76  Aligned_cols=81  Identities=21%  Similarity=0.257  Sum_probs=50.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec---------ChhhHH----HHHHcCCCeEEecCCCCChHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI---------LEHKLK----TAKEMGADATVLIDRNHSLEEISTHI  381 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~---------~~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~  381 (408)
                      .++++||+|+ +++|..+++.+...|++ |+++++         +.++.+    .+++.+...+.|..+   .+++++.+
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~-Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d---~~~~~~~~   93 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAK-VVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNS---VIDGAKVI   93 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEC--------------CHHHHHHHHHHTTCCEEECCCC---GGGHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCC---HHHHHHHH
Confidence            4578999999 99999999999999998 777766         444433    334456666665544   45555555


Q ss_pred             HHHhc-CCCCceEEEcccch
Q psy1413         382 IELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       382 ~~~~~-~~~~d~i~d~~g~~  400 (408)
                      .++.. ..++|++|+++|..
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~  113 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGIL  113 (613)
T ss_dssp             C----------CEECCCCCC
T ss_pred             HHHHHHCCCCcEEEECCCCC
Confidence            55433 24799999999964

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.54  E-value=0.0085  Score=56.39  Aligned_cols=78  Identities=15%  Similarity=0.148  Sum_probs=49.0

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH--HHHHHc-------CCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL--KTAKEM-------GADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~--~~~~~~-------ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      .++||+|+ |.+|..+++.+...|.+ |++++|+..+.  +.++++       +....+...|..+.+++.+.+...   
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYE-VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE-EEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            47999999 99999999999999986 88888876542  222221       222223334444556666666544   


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                       ++|+||+++|..
T Consensus        78 -~~d~vih~A~~~   89 (372)
T 1db3_A           78 -QPDEVYNLGAMS   89 (372)
T ss_dssp             -CCSEEEECCCCC
T ss_pred             -CCCEEEECCccc
Confidence             689999998853

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.54  E-value=0.0056  Score=53.10  Aligned_cols=71  Identities=21%  Similarity=0.226  Sum_probs=50.3

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      ++||+|+ |.+|..+++.+...|.+ |++++|+.++.+.+...+...+ . -|..+.++      +..  +++|+||+++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~-~-~D~~d~~~------~~~--~~~d~vi~~a   70 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHE-VLAVVRDPQKAADRLGATVATL-V-KEPLVLTE------ADL--DSVDAVVDAL   70 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHTCTTSEEE-E-CCGGGCCH------HHH--TTCSEEEECC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCE-EEEEEecccccccccCCCceEE-e-cccccccH------hhc--ccCCEEEECC
Confidence            5899999 99999999999999986 9999999888776544344332 1 12111222      222  4789999999


Q ss_pred             cch
Q psy1413         398 GIE  400 (408)
Q Consensus       398 g~~  400 (408)
                      |..
T Consensus        71 g~~   73 (224)
T 3h2s_A           71 SVP   73 (224)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            863

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.52  E-value=0.016  Score=52.58  Aligned_cols=87  Identities=20%  Similarity=0.280  Sum_probs=56.0

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh------------------hhHH----HHHHcCCCeEEe-cCCCC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILE------------------HKLK----TAKEMGADATVL-IDRNH  372 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~------------------~~~~----~~~~~ga~~~i~-~~~~~  372 (408)
                      .+.+|+|+|+|++|..+++.+.+.|..++.++|.+.                  .|.+    .++++..+..+. +....
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l  114 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNI  114 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCT
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccC
Confidence            347899999999999999999999999999998653                  3433    334444333332 22211


Q ss_pred             C-hHHHHHHHHHHh-----cCCCCceEEEcccchhh
Q psy1413         373 S-LEEISTHIIELL-----QGEQPDKTIDCSGIEST  402 (408)
Q Consensus       373 ~-~~~~~~~~~~~~-----~~~~~d~i~d~~g~~~~  402 (408)
                      + .+++.+.+..+.     ..+++|+|+||+.+..+
T Consensus       115 ~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~  150 (292)
T 3h8v_A          115 TTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEA  150 (292)
T ss_dssp             TSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHH
T ss_pred             CcHHHHHHHhhhhcccccccCCCCCEEEECCcchhh
Confidence            2 234443332221     12579999999987654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=96.51  E-value=0.011  Score=66.08  Aligned_cols=84  Identities=20%  Similarity=0.267  Sum_probs=62.3

Q ss_pred             CCCEEEEEec-ch-hHHHHHHHHHHhCCCeEEEEe-cChhhHHH----H-HHc---CCCeEEecCCCCChHHHHHHHHHH
Q psy1413         316 LGSKVLITGA-GP-IGLVTLLTARALGASRVVITD-ILEHKLKT----A-KEM---GADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       316 ~~~~~lv~G~-G~-~G~~~~~~~~~~Ga~~vv~~~-~~~~~~~~----~-~~~---ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      .++++||+|+ ++ +|..+++.+...|++ |++++ |+.++.+.    + +++   |....+...|..+.+++.+.+.++
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~-VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i  729 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGAK-VIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI  729 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTCE-EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCE-EEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            4689999998 88 999999999999998 77774 55544321    2 333   555555556777788888888887


Q ss_pred             hcC----C-CCceEEEcccch
Q psy1413         385 LQG----E-QPDKTIDCSGIE  400 (408)
Q Consensus       385 ~~~----~-~~d~i~d~~g~~  400 (408)
                      ...    + ++|++|+++|..
T Consensus       730 ~~~~~~~G~~IDiLVnNAGi~  750 (1878)
T 2uv9_A          730 YDTKNGLGWDLDYVVPFAAIP  750 (1878)
T ss_dssp             HCSSSSCCCCCSEEEECCCCC
T ss_pred             HHhhcccCCCCcEEEeCcccc
Confidence            644    2 599999999964

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.50  E-value=0.014  Score=53.23  Aligned_cols=74  Identities=22%  Similarity=0.231  Sum_probs=49.9

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh------hhHHHHH---HcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILE------HKLKTAK---EMGADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~------~~~~~~~---~~ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      .+++|+|+ |.+|..+++.+...|.+ |++++|+.      ++.+.++   ..|+.. + .-|..+.+++.+.++     
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~-v-~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHP-TFLLVRESTASSNSEKAQLLESFKASGANI-V-HGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCCCCTTTTHHHHHHHHHHHTTTCEE-E-CCCTTCHHHHHHHHH-----
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCC-EEEEECCcccccCHHHHHHHHHHHhCCCEE-E-EeccCCHHHHHHHHc-----
Confidence            56999999 99999999999999976 88888863      3333333   234432 2 233334444444432     


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                       ++|.||++++..
T Consensus        77 -~~d~vi~~a~~~   88 (308)
T 1qyc_A           77 -NVDVVISTVGSL   88 (308)
T ss_dssp             -TCSEEEECCCGG
T ss_pred             -CCCEEEECCcch
Confidence             589999999854

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.49  E-value=0.0012  Score=58.22  Aligned_cols=76  Identities=18%  Similarity=0.246  Sum_probs=49.7

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCC-eEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGAS-RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~-~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      +.++||+|+ |++|..+++.+...|+. +|++++|+.++.+.....+.. .+ .-|..+.+++.+.    .  +++|++|
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~-~~-~~D~~d~~~~~~~----~--~~~d~vi   89 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVN-QE-VVDFEKLDDYASA----F--QGHDVGF   89 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCE-EE-ECCGGGGGGGGGG----G--SSCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCce-EE-ecCcCCHHHHHHH----h--cCCCEEE
Confidence            568999999 99999999999999982 388899887654322211222 22 2222223333332    2  2799999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      +++|..
T Consensus        90 ~~ag~~   95 (242)
T 2bka_A           90 CCLGTT   95 (242)
T ss_dssp             ECCCCC
T ss_pred             ECCCcc
Confidence            999864

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=96.49  E-value=0.00014  Score=71.14  Aligned_cols=122  Identities=16%  Similarity=0.201  Sum_probs=81.5

Q ss_pred             ecCCeEEEEccCccccccccccccccC------------------------------cceeEEEccCchH----HHHhhc
Q psy1413         100 ICGSDVHYLTHGQIGDFRLSDPMIVGH------------------------------EASGIVSKVGAKV----KHLKAT  145 (408)
Q Consensus       100 ~~g~~vlv~g~G~vG~~~i~~a~~~G~------------------------------~~~~vv~~~g~~~----~~~~~l  145 (408)
                      +.|++++|+|.|.+|...++.++.+|+                              +++.++++++...    +.++.+
T Consensus       272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atgt~~~i~~~~l~~m  351 (494)
T 3ce6_A          272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAM  351 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSSSSCSBCHHHHHHS
T ss_pred             CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCCCHHHHHHHHHHhc
Confidence            468899999999999988887776664                              3455666666432    678999


Q ss_pred             cCCcEEEEEccCCCCcccCHHHHHhcCc---EEEEeecC-C-CcHHHHHHHHHcCCCC--------CCCceeeeeccchH
Q psy1413         146 RPGGCLVIVGAGSQDVKIPLVLTMTKEI---DIRGVFRY-A-NDYPIALAMVASGKVD--------VKKLITHNYLLEDT  212 (408)
Q Consensus       146 ~~gG~iv~~G~~~~~~~~~~~~~~~~~~---~l~g~~~~-~-~~~~~~~~l~~~g~~~--------~~~~i~~~~~l~~~  212 (408)
                      +++|+++.+|....  .++...+..+.+   ++.+.... . +++...+.++.++++.        +..++++.| ++++
T Consensus       352 k~ggilvnvG~~~~--eId~~aL~~~aL~~~~I~~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~a~~~~~s~-~~qa  428 (494)
T 3ce6_A          352 KDHAILGNIGHFDN--EIDMAGLERSGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSF-ANQT  428 (494)
T ss_dssp             CTTCEEEECSSSGG--GBCHHHHHHTTCEEEEEETTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSCHHHHHHHH-HHHH
T ss_pred             CCCcEEEEeCCCCC--ccCHHHHHHhhhccceEEEEEEEeecCCcchHHHHHhCCCEEeccCCCCCccccchHHH-HHHH
Confidence            99999999997653  467776666544   55543321 1 2223334455566552        223445555 7799


Q ss_pred             HHHHHHHHcCCC
Q psy1413         213 LHAFETAKTGAG  224 (408)
Q Consensus       213 ~~a~~~~~~~~~  224 (408)
                      .++++.+.+++.
T Consensus       429 ~~ai~~~~~g~~  440 (494)
T 3ce6_A          429 IAQIELWTKNDE  440 (494)
T ss_dssp             HHHHHHHHTGGG
T ss_pred             HHHHHHHHcCCC
Confidence            999999988654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=96.47  E-value=0.012  Score=65.93  Aligned_cols=84  Identities=25%  Similarity=0.241  Sum_probs=61.8

Q ss_pred             CCCEEEEEec-ch-hHHHHHHHHHHhCCCeEEEE-ecChhhHHHH-----HHc---CCCeEEecCCCCChHHHHHHHHHH
Q psy1413         316 LGSKVLITGA-GP-IGLVTLLTARALGASRVVIT-DILEHKLKTA-----KEM---GADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       316 ~~~~~lv~G~-G~-~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~~-----~~~---ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      .++++||+|+ ++ +|..+++.+...|++ |+++ .|+.++.+.+     +++   |....+...|..+.+++++.+.++
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~-Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAK-VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCE-EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCE-EEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            4688999998 87 999999999999997 7776 5666554322     223   444455556667788888888877


Q ss_pred             hcC------C-CCceEEEcccch
Q psy1413         385 LQG------E-QPDKTIDCSGIE  400 (408)
Q Consensus       385 ~~~------~-~~d~i~d~~g~~  400 (408)
                      ...      . .+|++|+++|..
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAGi~  775 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAAIP  775 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCCCC
T ss_pred             HHhccccccCCCCeEEEECCCcC
Confidence            643      1 599999999864

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.46  E-value=0.0031  Score=57.26  Aligned_cols=73  Identities=16%  Similarity=0.045  Sum_probs=50.6

Q ss_pred             EEEEEec-chhHHHHHHHHHHh-CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         319 KVLITGA-GPIGLVTLLTARAL-GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~-Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ++||+|+ |.+|..+++.+... |.+ |++++|+.++.+.+...+...+  .-|..+.+++.+.+      +++|.||++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~-V~~~~R~~~~~~~~~~~~v~~~--~~D~~d~~~l~~~~------~~~d~vi~~   72 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDH-FHIGVRNVEKVPDDWRGKVSVR--QLDYFNQESMVEAF------KGMDTVVFI   72 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTT-EEEEESSGGGSCGGGBTTBEEE--ECCTTCHHHHHHHT------TTCSEEEEC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCc-EEEEECCHHHHHHhhhCCCEEE--EcCCCCHHHHHHHH------hCCCEEEEe
Confidence            4899999 99999999998887 776 8999998887655444444322  22333344443332      378999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +|..
T Consensus        73 a~~~   76 (289)
T 3e48_A           73 PSII   76 (289)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8853

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.45  E-value=0.0028  Score=56.20  Aligned_cols=76  Identities=16%  Similarity=0.123  Sum_probs=53.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHH-hCCCeEEEEecChh-hHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARA-LGASRVVITDILEH-KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~-~Ga~~vv~~~~~~~-~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .++++||+|+ |++|..+++.+.. .|++ |++.+++++ +.+       ...+-..|..+.+++++.+..+. ..++|+
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~-v~~~~~~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~-~~~id~   73 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHT-VINIDIQQSFSAE-------NLKFIKADLTKQQDITNVLDIIK-NVSFDG   73 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEE-EEEEESSCCCCCT-------TEEEEECCTTCHHHHHHHHHHTT-TCCEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcE-EEEeccccccccc-------cceEEecCcCCHHHHHHHHHHHH-hCCCCE
Confidence            3568999999 9999999988877 5554 888887755 221       11223345556778888775544 558999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ++++.|..
T Consensus        74 lv~nAg~~   81 (244)
T 4e4y_A           74 IFLNAGIL   81 (244)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccC
Confidence            99999863

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=96.45  E-value=0.0075  Score=57.52  Aligned_cols=74  Identities=24%  Similarity=0.337  Sum_probs=55.0

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .-.+++++|+|.|.+|+.+++.++.+|++ |+++++++.+...+...|....          ++    .++.  ...|++
T Consensus       217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga~-Viv~D~dp~ra~~A~~~G~~v~----------~L----eeal--~~ADIV  279 (435)
T 3gvp_A          217 MFGGKQVVVCGYGEVGKGCCAALKAMGSI-VYVTEIDPICALQACMDGFRLV----------KL----NEVI--RQVDIV  279 (435)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHTTCEEC----------CH----HHHT--TTCSEE
T ss_pred             eecCCEEEEEeeCHHHHHHHHHHHHCCCE-EEEEeCChhhhHHHHHcCCEec----------cH----HHHH--hcCCEE
Confidence            45789999999999999999999999997 9999998877766666664311          12    2222  357888


Q ss_pred             EEcccchhhhh
Q psy1413         394 IDCSGIESTIK  404 (408)
Q Consensus       394 ~d~~g~~~~~~  404 (408)
                      +.|+|..+.++
T Consensus       280 i~atgt~~lI~  290 (435)
T 3gvp_A          280 ITCTGNKNVVT  290 (435)
T ss_dssp             EECSSCSCSBC
T ss_pred             EECCCCcccCC
Confidence            88877655443

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.45  E-value=0.01  Score=56.90  Aligned_cols=78  Identities=22%  Similarity=0.238  Sum_probs=55.2

Q ss_pred             EEEEEecchhHHHHHHHHHHhCC--CeEEEEecChhhHHHH-HHcCC----CeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         319 KVLITGAGPIGLVTLLTARALGA--SRVVITDILEHKLKTA-KEMGA----DATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga--~~vv~~~~~~~~~~~~-~~~ga----~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      +++|+|+|++|..+++.+...|.  ..|++.+|+.++.+.+ ++++.    ......-+..+.+++.+.+++.    ++|
T Consensus         3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----~~D   78 (405)
T 4ina_A            3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----KPQ   78 (405)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH----CCS
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh----CCC
Confidence            68999999999999999988884  4699999998887654 33331    1212222333456777777654    589


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +||+|+|..
T Consensus        79 vVin~ag~~   87 (405)
T 4ina_A           79 IVLNIALPY   87 (405)
T ss_dssp             EEEECSCGG
T ss_pred             EEEECCCcc
Confidence            999999854

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.43  E-value=0.007  Score=54.85  Aligned_cols=70  Identities=16%  Similarity=0.182  Sum_probs=51.5

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC---CeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA---DATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga---~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      .+++++|+|+|+.|..++..+...|+++|.+++|+.++.+.+ ++++.   ..+.+..+      +         ...+|
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~------l---------~~~aD  189 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ------L---------KQSYD  189 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------C---------CSCEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH------h---------cCCCC
Confidence            467899999999999999999999997799999998887654 44442   22333221      1         14689


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +||+|++..
T Consensus       190 iIInaTp~g  198 (281)
T 3o8q_A          190 VIINSTSAS  198 (281)
T ss_dssp             EEEECSCCC
T ss_pred             EEEEcCcCC
Confidence            999988653

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.39  E-value=0.014  Score=53.24  Aligned_cols=74  Identities=16%  Similarity=0.093  Sum_probs=51.1

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhC-CCeEEEEecChhhH--HHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALG-ASRVVITDILEHKL--KTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~G-a~~vv~~~~~~~~~--~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ..++||+|+ |.+|..+++.+...| .+ |++++|+.++.  +.+...++..+ . -|..+.+++.+.+      +++|.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~-V~~~~R~~~~~~~~~l~~~~~~~~-~-~D~~d~~~l~~~~------~~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFK-VRVVTRNPRKKAAKELRLQGAEVV-Q-GDQDDQVIMELAL------NGAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSE-EEEEESCTTSHHHHHHHHTTCEEE-E-CCTTCHHHHHHHH------TTCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCce-EEEEEcCCCCHHHHHHHHCCCEEE-E-ecCCCHHHHHHHH------hcCCE
Confidence            468999999 999999999999888 65 88899987664  33344455432 2 2333344444333      36899


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      ||+++|.
T Consensus        76 vi~~a~~   82 (299)
T 2wm3_A           76 TFIVTNY   82 (299)
T ss_dssp             EEECCCH
T ss_pred             EEEeCCC
Confidence            9999874

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=96.39  E-value=0.0057  Score=66.54  Aligned_cols=84  Identities=25%  Similarity=0.248  Sum_probs=60.7

Q ss_pred             CCCEEEEEec-ch-hHHHHHHHHHHhCCCeEEEE-ecChhhHH-HHHHc-------CCCeEEecCCCCChHHHHHHHHHH
Q psy1413         316 LGSKVLITGA-GP-IGLVTLLTARALGASRVVIT-DILEHKLK-TAKEM-------GADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       316 ~~~~~lv~G~-G~-~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~-~~~~~-------ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      .++++||+|+ ++ +|..+++.+...|++ |+++ +|+.++.+ .++++       |....+...|..+.+++++.+.++
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~-VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQGGAK-VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHHHTCE-EEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHHCcCE-EEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            4678999998 87 999999999999998 6666 56655443 22333       444444455666778888888877


Q ss_pred             hcC------C-CCceEEEcccch
Q psy1413         385 LQG------E-QPDKTIDCSGIE  400 (408)
Q Consensus       385 ~~~------~-~~d~i~d~~g~~  400 (408)
                      ...      . .+|++|+++|..
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~  576 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIP  576 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCC
T ss_pred             HHhccccccCCCCeEEEECCCcC
Confidence            644      1 599999999854

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.39  E-value=0.016  Score=53.29  Aligned_cols=76  Identities=12%  Similarity=0.108  Sum_probs=51.3

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC---hhhHHHH-HHc----CCC-eEEecCCCCChHHHHHHHHHHhc
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL---EHKLKTA-KEM----GAD-ATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~---~~~~~~~-~~~----ga~-~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      .++++||+|+|+.|..++..+...|+++|.++.|+   .+|.+.+ +++    +.. .+++..+   .+...+.+     
T Consensus       147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~---l~~~~~~l-----  218 (312)
T 3t4e_A          147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLAD---QHAFTEAL-----  218 (312)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTC---HHHHHHHH-----
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHh---hhhhHhhc-----
Confidence            46789999999999999999999999889999999   6665543 333    222 2333322   11112222     


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                       ..+|+||+|++..
T Consensus       219 -~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 -ASADILTNGTKVG  231 (312)
T ss_dssp             -HHCSEEEECSSTT
T ss_pred             -cCceEEEECCcCC
Confidence             2479999998743

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.34  E-value=0.015  Score=53.45  Aligned_cols=74  Identities=18%  Similarity=0.242  Sum_probs=49.7

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh------hhHHHH---HHcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILE------HKLKTA---KEMGADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~------~~~~~~---~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      .+++|+|+ |.+|..+++.+...|.+ |++++|+.      ++.+.+   ...++.. +. -|..+.+++.+.+      
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~-v~-~D~~d~~~l~~a~------   75 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHP-TFIYARPLTPDSTPSSVQLREEFRSMGVTI-IE-GEMEEHEKMVSVL------   75 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCC-EEEEECCCCTTCCHHHHHHHHHHHHTTCEE-EE-CCTTCHHHHHHHH------
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCc-EEEEECCcccccChHHHHHHHHhhcCCcEE-EE-ecCCCHHHHHHHH------
Confidence            46999999 99999999999999976 88888875      333333   2334432 22 2333344444333      


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      +++|.||++++..
T Consensus        76 ~~~d~vi~~a~~~   88 (321)
T 3c1o_A           76 KQVDIVISALPFP   88 (321)
T ss_dssp             TTCSEEEECCCGG
T ss_pred             cCCCEEEECCCcc
Confidence            3599999998854

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.33  E-value=0.0049  Score=57.28  Aligned_cols=73  Identities=16%  Similarity=0.207  Sum_probs=47.8

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      ++||+|+ |.+|..+++.+...|.+ |++++|+..+.+.+.+.+... + .-|..+.+++.+.+      +++|+||+++
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~l~~~~~~~-~-~~Dl~d~~~~~~~~------~~~d~vih~a   85 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHD-LVLIHRPSSQIQRLAYLEPEC-R-VAEMLDHAGLERAL------RGLDGVIFSA   85 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCE-EEEEECTTSCGGGGGGGCCEE-E-ECCTTCHHHHHHHT------TTCSEEEEC-
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCE-EEEEecChHhhhhhccCCeEE-E-EecCCCHHHHHHHH------cCCCEEEECC
Confidence            7999999 99999999999999976 888988876654443334332 2 22333334443332      3699999999


Q ss_pred             cch
Q psy1413         398 GIE  400 (408)
Q Consensus       398 g~~  400 (408)
                      |..
T Consensus        86 ~~~   88 (342)
T 2x4g_A           86 GYY   88 (342)
T ss_dssp             ---
T ss_pred             ccC
Confidence            853

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.32  E-value=0.018  Score=54.12  Aligned_cols=86  Identities=22%  Similarity=0.174  Sum_probs=62.3

Q ss_pred             cCCCCEEEEEec-chhHHHHHHHHH-HhCCCeEEEEecChh----h------------HHHHHHcCCCeEEecCCCCChH
Q psy1413         314 VTLGSKVLITGA-GPIGLVTLLTAR-ALGASRVVITDILEH----K------------LKTAKEMGADATVLIDRNHSLE  375 (408)
Q Consensus       314 ~~~~~~~lv~G~-G~~G~~~~~~~~-~~Ga~~vv~~~~~~~----~------------~~~~~~~ga~~~i~~~~~~~~~  375 (408)
                      ....+++||+|+ .|+|++.+..+. ..|+. ++++.+..+    +            .+.+++.|-....-..|..+.+
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~-vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAA-TIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCE-EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCC-EEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence            345689999999 999997665444 67988 666655321    1            2456777877766667777778


Q ss_pred             HHHHHHHHHhc-CCCCceEEEcccch
Q psy1413         376 EISTHIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       376 ~~~~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      ..++.+.++.. .+++|+++++.+.+
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccc
Confidence            88888877754 46899999998865

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.30  E-value=0.017  Score=52.03  Aligned_cols=70  Identities=14%  Similarity=0.190  Sum_probs=51.7

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      +..+.+++|+|+|+.+..++..+...|+++|.++.|+.+|.+.+ ++++.+  +.. +      .    .    ...+|+
T Consensus       116 ~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~--~~~-~------~----~----~~~~Di  178 (271)
T 1npy_A          116 LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA--YIN-S------L----E----NQQADI  178 (271)
T ss_dssp             CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE--EES-C------C----T----TCCCSE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--cch-h------h----h----cccCCE
Confidence            34567899999999999999999999998899999998886554 556641  110 1      0    0    136899


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ||+|++..
T Consensus       179 vInaTp~g  186 (271)
T 1npy_A          179 LVNVTSIG  186 (271)
T ss_dssp             EEECSSTT
T ss_pred             EEECCCCC
Confidence            99988753

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.30  E-value=0.027  Score=44.59  Aligned_cols=76  Identities=21%  Similarity=0.261  Sum_probs=52.4

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      .+++|+|+|.+|..+++.+...|.+ |+++++++++.+.+.+ +|... +.. +..+.+.    +.+. .-.++|++|.+
T Consensus         5 m~i~IiG~G~iG~~~a~~L~~~g~~-v~~~d~~~~~~~~~~~~~~~~~-~~~-d~~~~~~----l~~~-~~~~~d~vi~~   76 (140)
T 1lss_A            5 MYIIIAGIGRVGYTLAKSLSEKGHD-IVLIDIDKDICKKASAEIDALV-ING-DCTKIKT----LEDA-GIEDADMYIAV   76 (140)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHCSSEE-EES-CTTSHHH----HHHT-TTTTCSEEEEC
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHhcCcEE-EEc-CCCCHHH----HHHc-CcccCCEEEEe
Confidence            4689999999999999999999976 8889999888877654 46543 222 1112222    2222 12478999999


Q ss_pred             ccchh
Q psy1413         397 SGIES  401 (408)
Q Consensus       397 ~g~~~  401 (408)
                      ++...
T Consensus        77 ~~~~~   81 (140)
T 1lss_A           77 TGKEE   81 (140)
T ss_dssp             CSCHH
T ss_pred             eCCch
Confidence            88653

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.29  E-value=0.013  Score=53.89  Aligned_cols=74  Identities=22%  Similarity=0.229  Sum_probs=50.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHHHH---HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLKTA---KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~~~---~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .++||+|+ |.+|..+++.+...|.+ |++++|+.. +.+.+   ...|+..+  .-|..+.+++.+.+      +++|.
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~~~~l~~~~v~~v--~~Dl~d~~~l~~a~------~~~d~   82 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHP-TYVFTRPNSSKTTLLDEFQSLGAIIV--KGELDEHEKLVELM------KKVDV   82 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCC-EEEEECTTCSCHHHHHHHHHTTCEEE--ECCTTCHHHHHHHH------TTCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCc-EEEEECCCCchhhHHHHhhcCCCEEE--EecCCCHHHHHHHH------cCCCE
Confidence            46999999 99999999999999976 888888764 44433   33454332  22333344444333      36999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ||++++..
T Consensus        83 vi~~a~~~   90 (318)
T 2r6j_A           83 VISALAFP   90 (318)
T ss_dssp             EEECCCGG
T ss_pred             EEECCchh
Confidence            99998853

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.29  E-value=0.0021  Score=57.07  Aligned_cols=72  Identities=19%  Similarity=0.226  Sum_probs=48.6

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      +++||+|+ |++|..+++.+...|++ |++++|+.++.+.      ..   ..|..+.+++++.+.+.  ..++|++|++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~------~~---~~D~~~~~~~~~~~~~~--~~~~d~vi~~   69 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHT-VIGIDRGQADIEA------DL---STPGGRETAVAAVLDRC--GGVLDGLVCC   69 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSSSEEC------CT---TSHHHHHHHHHHHHHHH--TTCCSEEEEC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCE-EEEEeCChhHccc------cc---cCCcccHHHHHHHHHHc--CCCccEEEEC
Confidence            36899999 99999999999999987 8888887654321      10   11111123444444443  2479999999


Q ss_pred             ccchh
Q psy1413         397 SGIES  401 (408)
Q Consensus       397 ~g~~~  401 (408)
                      +|...
T Consensus        70 Ag~~~   74 (255)
T 2dkn_A           70 AGVGV   74 (255)
T ss_dssp             CCCCT
T ss_pred             CCCCC
Confidence            98543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.28  E-value=0.0075  Score=56.20  Aligned_cols=70  Identities=17%  Similarity=0.248  Sum_probs=46.7

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      ....++||+|+ |.+|..+++.+...|.+ |++++|+..+      .+...+  ..|..+.+++.+.+      .++|+|
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~------~~~~~~--~~Dl~d~~~~~~~~------~~~d~v   81 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRT-VRGFDLRPSG------TGGEEV--VGSLEDGQALSDAI------MGVSAV   81 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCC-EEEEESSCCS------SCCSEE--ESCTTCHHHHHHHH------TTCSEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCE-EEEEeCCCCC------CCccEE--ecCcCCHHHHHHHH------hCCCEE
Confidence            55578999999 99999999999999987 8888887665      233322  22333344444433      268999


Q ss_pred             EEcccc
Q psy1413         394 IDCSGI  399 (408)
Q Consensus       394 ~d~~g~  399 (408)
                      |++.+.
T Consensus        82 ih~A~~   87 (347)
T 4id9_A           82 LHLGAF   87 (347)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.23  E-value=0.011  Score=59.60  Aligned_cols=81  Identities=23%  Similarity=0.250  Sum_probs=54.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh--hhHHHHHHcCCCeEEecCCCCCh-HHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE--HKLKTAKEMGADATVLIDRNHSL-EEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~--~~~~~~~~~ga~~~i~~~~~~~~-~~~~~~~~~~~~-~~~~  390 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++.++..  +..+.+++.|...+....|   . ++.++.+.++.. ..++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~-Vv~~~~~~~~~~~~~i~~~g~~~~~~~~D---v~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAK-VVVNDFKDATKTVDEIKAAGGEAWPDQHD---VAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEECSSCCHHHHHHHHHTTCEEEEECCC---HHHHHHHHHHHHHHHHSCC
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCE-EEEEeCccHHHHHHHHHhcCCeEEEEEcC---hHHHHHHHHHHHHHhcCCC
Confidence            3578999999 99999999999999998 77777532  2234455556554444433   3 444444444332 2479


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |+++++.|..
T Consensus       397 DiLVnNAGi~  406 (604)
T 2et6_A          397 DILVNNAGIL  406 (604)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999964

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.22  E-value=0.018  Score=53.78  Aligned_cols=77  Identities=21%  Similarity=0.189  Sum_probs=49.5

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh----hHHHHH-Hc----CCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH----KLKTAK-EM----GADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~----~~~~~~-~~----ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      ..++||+|+ |.+|..+++.+...|.+ |++++|+..    +++.+. .+    +....+..-|..+.+++.+.+     
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----  100 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQK-VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-----  100 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh-----
Confidence            368999999 99999999999999986 888888643    233222 11    112222223333344444433     


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                       +++|+||+++|..
T Consensus       101 -~~~d~vih~A~~~  113 (352)
T 1sb8_A          101 -AGVDYVLHQAALG  113 (352)
T ss_dssp             -TTCSEEEECCSCC
T ss_pred             -cCCCEEEECCccc
Confidence             2799999999853

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=96.19  E-value=0.024  Score=52.43  Aligned_cols=76  Identities=25%  Similarity=0.333  Sum_probs=49.8

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh----hhHHHHHHc-CCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILE----HKLKTAKEM-GADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~----~~~~~~~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ++||+|+ |.+|..+++.+...|.+ |+++++..    +..+.++++ +....+..-|..+.+++.+.+.+    .++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHD-VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD----HAIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH----TTCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCE-EEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc----cCCCE
Confidence            5899999 99999999999999987 77776532    223333332 32222223344445555555543    26999


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      ||+++|.
T Consensus        77 vih~A~~   83 (338)
T 1udb_A           77 VIHFAGL   83 (338)
T ss_dssp             EEECCSC
T ss_pred             EEECCcc
Confidence            9999985

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.16  E-value=0.0067  Score=53.98  Aligned_cols=72  Identities=22%  Similarity=0.322  Sum_probs=47.9

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      +++||+|+ |++|..+++.+...|++ |++++|+.++.+.      .  + ..|..+.+++++.+.+.  ..++|++|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~------~--~-~~Dl~~~~~v~~~~~~~--~~~id~lv~~   69 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQ-IVGIDIRDAEVIA------D--L-STAEGRKQAIADVLAKC--SKGMDGLVLC   69 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSSSEEC------C--T-TSHHHHHHHHHHHHTTC--TTCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCchhhcc------c--c-ccCCCCHHHHHHHHHHh--CCCCCEEEEC
Confidence            46899999 99999999999999997 8888888765321      1  0 11111123333333322  2478999999


Q ss_pred             ccchh
Q psy1413         397 SGIES  401 (408)
Q Consensus       397 ~g~~~  401 (408)
                      +|...
T Consensus        70 Ag~~~   74 (257)
T 1fjh_A           70 AGLGP   74 (257)
T ss_dssp             CCCCT
T ss_pred             CCCCC
Confidence            98643

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.14  E-value=0.0082  Score=54.44  Aligned_cols=65  Identities=23%  Similarity=0.334  Sum_probs=46.1

Q ss_pred             cCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         314 VTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       314 ~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ..+..++||+|+ |.+|..+++.+...|.+ |++++|+.                 .|..+.+++.+.+.+.    ++|+
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~-----------------~Dl~d~~~~~~~~~~~----~~d~   66 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVE-VIPTDVQD-----------------LDITNVLAVNKFFNEK----KPNV   66 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEE-EEEECTTT-----------------CCTTCHHHHHHHHHHH----CCSE
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCe-EEeccCcc-----------------CCCCCHHHHHHHHHhc----CCCE
Confidence            467789999999 99999999999988976 88888751                 1222345555555443    6899


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ||+++|..
T Consensus        67 vih~A~~~   74 (292)
T 1vl0_A           67 VINCAAHT   74 (292)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccC
Confidence            99988753

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.12  E-value=0.0083  Score=54.13  Aligned_cols=72  Identities=17%  Similarity=0.158  Sum_probs=49.1

Q ss_pred             EEEEEec-chhHHHHHHHHHHh--CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         319 KVLITGA-GPIGLVTLLTARAL--GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~--Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      ++||+|+ |.+|..+++.+...  |.+ |++++|+.++.+.+...+...+  ..|..+.+++.+.    .  +++|.||+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~--~~D~~d~~~~~~~----~--~~~d~vi~   71 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQ-IVAIVRNPAKAQALAAQGITVR--QADYGDEAALTSA----L--QGVEKLLL   71 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGG-EEEEESCTTTCHHHHHTTCEEE--ECCTTCHHHHHHH----T--TTCSEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCce-EEEEEcChHhhhhhhcCCCeEE--EcCCCCHHHHHHH----H--hCCCEEEE
Confidence            4799999 99999999999887  876 8889998877665555454322  2233334444333    2  36899999


Q ss_pred             cccc
Q psy1413         396 CSGI  399 (408)
Q Consensus       396 ~~g~  399 (408)
                      +++.
T Consensus        72 ~a~~   75 (286)
T 2zcu_A           72 ISSS   75 (286)
T ss_dssp             CC--
T ss_pred             eCCC
Confidence            9874

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=96.12  E-value=0.03  Score=53.22  Aligned_cols=83  Identities=20%  Similarity=0.294  Sum_probs=51.9

Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH-----------------HHHH----HcCCCeEEecCC
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL-----------------KTAK----EMGADATVLIDR  370 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-----------------~~~~----~~ga~~~i~~~~  370 (408)
                      ......++||+|+ |-+|..+++.+...|.+ |++++++....                 +.++    ..+....+...|
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D   85 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYE-VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   85 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCe-EEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence            3456789999999 99999999999989986 88887753321                 1111    123222222344


Q ss_pred             CCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         371 NHSLEEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      ..+.+++.+.+...    .+|+||+++|..
T Consensus        86 l~d~~~~~~~~~~~----~~D~Vih~A~~~  111 (404)
T 1i24_A           86 ICDFEFLAESFKSF----EPDSVVHFGEQR  111 (404)
T ss_dssp             TTSHHHHHHHHHHH----CCSEEEECCSCC
T ss_pred             CCCHHHHHHHHhcc----CCCEEEECCCCC
Confidence            44556666665543    599999999853

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.09  E-value=0.012  Score=55.63  Aligned_cols=78  Identities=14%  Similarity=0.060  Sum_probs=51.1

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-----HHHHH-H----cCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-----LKTAK-E----MGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-----~~~~~-~----~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      .++||+|+ |.+|..+++.+...|.+ |++++|+..+     ++.+. .    .+....+..-|..+.+++.+.+...  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYE-VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCE-EEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc--
Confidence            57999999 99999999999999986 8888887543     22110 0    1112222233444556666666544  


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                        ++|+||+++|..
T Consensus       102 --~~d~vih~A~~~  113 (375)
T 1t2a_A          102 --KPTEIYNLGAQS  113 (375)
T ss_dssp             --CCSEEEECCSCC
T ss_pred             --CCCEEEECCCcc
Confidence              689999999853

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.09  E-value=0.012  Score=55.50  Aligned_cols=76  Identities=20%  Similarity=0.098  Sum_probs=51.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHh-CCCeEEEEecChhhHHHHHHcCCCeEEecCCCC-ChHHHHHHHHHHhcCCCCceE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARAL-GASRVVITDILEHKLKTAKEMGADATVLIDRNH-SLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~-Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      ..++||+|+ |.+|..+++.+... |.+ |++++|+.++.+.+.+..--.++ .-|.. +.+.+.+.+.      ++|+|
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~v~~~-~~Dl~~d~~~~~~~~~------~~d~V   95 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWE-VFGMDMQTDRLGDLVKHERMHFF-EGDITINKEWVEYHVK------KCDVI   95 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCE-EEEEESCCTTTGGGGGSTTEEEE-ECCTTTCHHHHHHHHH------HCSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCE-EEEEeCChhhhhhhccCCCeEEE-eCccCCCHHHHHHHhc------cCCEE
Confidence            368999999 99999999999888 776 99999987766544332211222 23333 3444444443      68999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |++++..
T Consensus        96 ih~A~~~  102 (372)
T 3slg_A           96 LPLVAIA  102 (372)
T ss_dssp             EECBCCC
T ss_pred             EEcCccc
Confidence            9988854

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.08  E-value=0.0068  Score=54.78  Aligned_cols=72  Identities=17%  Similarity=0.196  Sum_probs=50.6

Q ss_pred             EEEEEec-chhHHHHHHHHHHh--CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         319 KVLITGA-GPIGLVTLLTARAL--GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~--Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      ++||+|+ |.+|..+++.+...  |.+ |++++|+.++.+.+...+...+  ..|..+.+++.+.    .  +++|.||+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~l~~~~~~~~--~~D~~d~~~l~~~----~--~~~d~vi~   72 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQ-IIAIVRNVEKASTLADQGVEVR--HGDYNQPESLQKA----F--AGVSKLLF   72 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGG-EEEEESCTTTTHHHHHTTCEEE--ECCTTCHHHHHHH----T--TTCSEEEE
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCe-EEEEEcCHHHHhHHhhcCCeEE--EeccCCHHHHHHH----H--hcCCEEEE
Confidence            5899999 99999999998887  876 8889998877666555454322  2233333444333    2  36899999


Q ss_pred             cccc
Q psy1413         396 CSGI  399 (408)
Q Consensus       396 ~~g~  399 (408)
                      +++.
T Consensus        73 ~a~~   76 (287)
T 2jl1_A           73 ISGP   76 (287)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            9874

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.06  E-value=0.013  Score=56.02  Aligned_cols=73  Identities=18%  Similarity=0.235  Sum_probs=53.0

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .-.+++++|+|.|.+|+.+++.++.+|++ |+++++++.+...+...|...+ +         +.+    +.  +..|+|
T Consensus       244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa~-Viv~d~dp~~a~~A~~~G~~vv-~---------LeE----lL--~~ADIV  306 (464)
T 3n58_A          244 MMAGKVAVVCGYGDVGKGSAQSLAGAGAR-VKVTEVDPICALQAAMDGFEVV-T---------LDD----AA--STADIV  306 (464)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSHHHHHHHHHTTCEEC-C---------HHH----HG--GGCSEE
T ss_pred             cccCCEEEEECcCHHHHHHHHHHHHCCCE-EEEEeCCcchhhHHHhcCceec-c---------HHH----HH--hhCCEE
Confidence            46789999999999999999999999997 9999888776655555565321 1         222    22  257888


Q ss_pred             EEcccchhhh
Q psy1413         394 IDCSGIESTI  403 (408)
Q Consensus       394 ~d~~g~~~~~  403 (408)
                      +.++|..+.+
T Consensus       307 v~atgt~~lI  316 (464)
T 3n58_A          307 VTTTGNKDVI  316 (464)
T ss_dssp             EECCSSSSSB
T ss_pred             EECCCCcccc
Confidence            8887755443

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.06  E-value=0.01  Score=55.68  Aligned_cols=79  Identities=16%  Similarity=0.174  Sum_probs=49.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHH--hCCCeEEEEecChhhHH----------HH-HHcCCCeEEecCCCCChHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARA--LGASRVVITDILEHKLK----------TA-KEMGADATVLIDRNHSLEEISTHI  381 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~--~Ga~~vv~~~~~~~~~~----------~~-~~~ga~~~i~~~~~~~~~~~~~~~  381 (408)
                      .+.++||+|+ |.+|..+++.+..  .|.+ |++++|+.....          .. ...+....+..-|..+.+++.+. 
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-   86 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAK-VVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL-   86 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSE-EEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCe-EEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-
Confidence            3578999999 9999999999998  8887 888888654111          00 11111112222333344444333 


Q ss_pred             HHHhcCCCCceEEEcccch
Q psy1413         382 IELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       382 ~~~~~~~~~d~i~d~~g~~  400 (408)
                          ...++|+||+++|..
T Consensus        87 ----~~~~~D~vih~A~~~  101 (362)
T 3sxp_A           87 ----EKLHFDYLFHQAAVS  101 (362)
T ss_dssp             ----TTSCCSEEEECCCCC
T ss_pred             ----hccCCCEEEECCccC
Confidence                235899999999854

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.04  E-value=0.014  Score=53.41  Aligned_cols=70  Identities=14%  Similarity=0.189  Sum_probs=46.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      .++||+|+ |.+|..+++.+...|.+ |++++|+..+.+ ++  +.. ++ .-|.   .  .+.+.++.  +++|+||++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~-~~--~~~-~~-~~Dl---~--~~~~~~~~--~~~d~Vih~   69 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNT-PIILTRSIGNKA-IN--DYE-YR-VSDY---T--LEDLINQL--NDVDAVVHL   69 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCCC--------CCE-EE-ECCC---C--HHHHHHHT--TTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCE-EEEEeCCCCccc-CC--ceE-EE-Eccc---c--HHHHHHhh--cCCCEEEEc
Confidence            57999999 99999999999999986 899998854444 33  332 22 2232   2  33444443  279999998


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      ++..
T Consensus        70 a~~~   73 (311)
T 3m2p_A           70 AATR   73 (311)
T ss_dssp             CCCC
T ss_pred             cccC
Confidence            8753

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.03  E-value=0.058  Score=47.90  Aligned_cols=34  Identities=32%  Similarity=0.420  Sum_probs=30.6

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      +.+++|+|+|++|..+++.+.+.|..++.+++..
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4789999999999999999999999999998653

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.02  E-value=0.011  Score=54.95  Aligned_cols=78  Identities=23%  Similarity=0.177  Sum_probs=51.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH-HHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL-KTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      +.++||+|+ |.+|..+++.+...|.+ |++++|+..+. +.++++. ...+...|..+.+++.+.+..    ..+|+||
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~l~~~~-~~~~~~~Dl~d~~~~~~~~~~----~~~D~vi   94 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLERGDK-VVGIDNFATGRREHLKDHP-NLTFVEGSIADHALVNQLIGD----LQPDAVV   94 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCGGGSCCCT-TEEEEECCTTCHHHHHHHHHH----HCCSEEE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEECCCccchhhHhhcC-CceEEEEeCCCHHHHHHHHhc----cCCcEEE
Confidence            467999999 99999999999999976 88888865332 2222111 122223344445555555543    2689999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      +++|..
T Consensus        95 h~A~~~  100 (333)
T 2q1w_A           95 HTAASY  100 (333)
T ss_dssp             ECCCCC
T ss_pred             ECceec
Confidence            998854

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.99  E-value=0.023  Score=55.43  Aligned_cols=75  Identities=16%  Similarity=0.160  Sum_probs=51.5

Q ss_pred             CCEEEEEecchhHHHHHHHHHHh-CCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         317 GSKVLITGAGPIGLVTLLTARAL-GASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~-Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      ..+++|+|+|++|..+++.+... |. +|.+++|+.++.+.+.+ .+... +.. +..+.+++.+.+.      ++|+||
T Consensus        23 ~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~-~~~-D~~d~~~l~~~l~------~~DvVI   93 (467)
T 2axq_A           23 GKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKA-ISL-DVTDDSALDKVLA------DNDVVI   93 (467)
T ss_dssp             CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEE-EEC-CTTCHHHHHHHHH------TSSEEE
T ss_pred             CCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcE-EEE-ecCCHHHHHHHHc------CCCEEE
Confidence            35799999999999999998887 55 59999999888776643 34322 111 2122344444332      689999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      +|++..
T Consensus        94 n~tp~~   99 (467)
T 2axq_A           94 SLIPYT   99 (467)
T ss_dssp             ECSCGG
T ss_pred             ECCchh
Confidence            999864

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=95.96  E-value=0.014  Score=53.92  Aligned_cols=76  Identities=18%  Similarity=0.205  Sum_probs=49.9

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      .++||+|+ |.+|..+++.+...|.+ |++++|+..+..  +.+.....+...|..+.+++.+.+.+    .++|+||++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~vih~   74 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLS-VVVVDNLQTGHE--DAITEGAKFYNGDLRDKAFLRDVFTQ----ENIEAVMHF   74 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCG--GGSCTTSEEEECCTTCHHHHHHHHHH----SCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCE-EEEEeCCCcCch--hhcCCCcEEEECCCCCHHHHHHHHhh----cCCCEEEEC
Confidence            36899999 99999999999999976 888887644321  11211111222333445555555544    379999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +|..
T Consensus        75 a~~~   78 (330)
T 2c20_A           75 AADS   78 (330)
T ss_dssp             CCCC
T ss_pred             Cccc
Confidence            9854

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=95.94  E-value=0.022  Score=53.83  Aligned_cols=78  Identities=14%  Similarity=0.058  Sum_probs=51.4

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-----HHHH-HH---cCC-CeEEecCCCCChHHHHHHHHHHhc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-----LKTA-KE---MGA-DATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-----~~~~-~~---~ga-~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      .++||+|+ |.+|..+++.+...|.+ |++++|+..+     ++.+ ++   .+. ...+..-|..+.+++.+.+...  
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYE-VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc--
Confidence            57999999 99999999999999986 8888887553     2211 11   011 2222233444556666666544  


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                        ++|+||+++|..
T Consensus       106 --~~d~Vih~A~~~  117 (381)
T 1n7h_A          106 --KPDEVYNLAAQS  117 (381)
T ss_dssp             --CCSEEEECCSCC
T ss_pred             --CCCEEEECCccc
Confidence              689999999853

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=95.93  E-value=0.015  Score=53.08  Aligned_cols=74  Identities=19%  Similarity=0.211  Sum_probs=50.7

Q ss_pred             CEEEEEec-chhHHHHHHHHHHh--CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARAL--GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~--Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .++||+|+ |.+|..+++.+...  |.+ |++++|+..+.+...  +.. ++ ..|..+.+++.+.+++.    ++|+||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~~~--~~~-~~-~~D~~d~~~~~~~~~~~----~~d~vi   73 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTEN-VIASDIRKLNTDVVN--SGP-FE-VVNALDFNQIEHLVEVH----KITDIY   73 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGG-EEEEESCCCSCHHHH--SSC-EE-ECCTTCHHHHHHHHHHT----TCCEEE
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCE-EEEEcCCCccccccC--CCc-eE-EecCCCHHHHHHHHhhc----CCCEEE
Confidence            56999999 99999999988887  676 888888766533222  333 22 22333455555555432    799999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      +++|..
T Consensus        74 h~a~~~   79 (312)
T 2yy7_A           74 LMAALL   79 (312)
T ss_dssp             ECCCCC
T ss_pred             ECCccC
Confidence            999854

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=95.93  E-value=0.018  Score=53.92  Aligned_cols=77  Identities=23%  Similarity=0.237  Sum_probs=50.2

Q ss_pred             EEEEEec-chhHHHHHHHHHHh-CCCeEEEEecCh--hhHHHHHHc--CCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         319 KVLITGA-GPIGLVTLLTARAL-GASRVVITDILE--HKLKTAKEM--GADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~-Ga~~vv~~~~~~--~~~~~~~~~--ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ++||+|+ |.+|..+++.+... |.+ |++++|+.  .+.+.++++  +....+...|..+.+++.+.+.+    .++|+
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~d~   76 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDT-VVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQ----YQPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCE-EEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH----HCCSE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCe-EEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhh----cCCCE
Confidence            5899999 99999999988887 665 88888754  222222222  22222223344455666666554    27999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ||+++|..
T Consensus        77 vih~A~~~   84 (361)
T 1kew_A           77 VMHLAAES   84 (361)
T ss_dssp             EEECCSCC
T ss_pred             EEECCCCc
Confidence            99999854

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=95.93  E-value=0.034  Score=51.50  Aligned_cols=76  Identities=24%  Similarity=0.277  Sum_probs=50.5

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh--hh---HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILE--HK---LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~--~~---~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ++||+|+ |.+|..+++.+...|.+ |++++|+.  ..   .+.+++.+--.++ .-|..+.+++.+.+..    .++|+
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~-~~Dl~d~~~~~~~~~~----~~~d~   76 (347)
T 1orr_A            3 KLLITGGCGFLGSNLASFALSQGID-LIVFDNLSRKGATDNLHWLSSLGNFEFV-HGDIRNKNDVTRLITK----YMPDS   76 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSTTHHHHHHHHHTTCCCEEE-ECCTTCHHHHHHHHHH----HCCSE
T ss_pred             EEEEeCCCchhHHHHHHHHHhCCCE-EEEEeCCCccCchhhhhhhccCCceEEE-EcCCCCHHHHHHHHhc----cCCCE
Confidence            6899999 99999999999999987 88887642  11   2223332312222 2344455666666654    25999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ||+++|..
T Consensus        77 vih~A~~~   84 (347)
T 1orr_A           77 CFHLAGQV   84 (347)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccc
Confidence            99999853

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=95.91  E-value=0.0043  Score=55.69  Aligned_cols=115  Identities=18%  Similarity=0.192  Sum_probs=65.2

Q ss_pred             cccccccCCccc-----cccceeecccCCCCccceeEEeeccceeeeCCCCCC-cccc-------cccchhhhhhhhh-h
Q psy1413         245 RTCTYCKEGRYN-----LCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVS-LEEG-------ALLEPLSVGVHAC-R  310 (408)
Q Consensus       245 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~-~~~a-------a~~~~~~~~~~~~-~  310 (408)
                      -.|..|+.+..+     .|.+...+...  .++|.++.....+... .|.... ...+       ....+........ .
T Consensus         3 ~~Cp~C~~~~~~~~~~~~C~~~~~~~~~--~~Gy~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (269)
T 1p91_A            3 FSCPLCHQPLSREKNSYICPQRHQFDMA--KEGYVNLLPVQHKRSR-DPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLR   79 (269)
T ss_dssp             BBCTTTCCBCEEETTEEECTTCCEEEBC--TTSCEECSCSSSSCSC-CCSSSHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred             ccCCCCCccceeCCCEEECCCCCcCCcC--CCEEEEeecccccCCC-CCCCCHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence            358999999877     88886665542  3456665443322111 121111 0000       0000110111111 1


Q ss_pred             ccCcCCCCEEEEEecchhHHHHHHHHHHh-CCCeEEEEecChhhHHHHHHcCCCe
Q psy1413         311 RAGVTLGSKVLITGAGPIGLVTLLTARAL-GASRVVITDILEHKLKTAKEMGADA  364 (408)
Q Consensus       311 ~~~~~~~~~~lv~G~G~~G~~~~~~~~~~-Ga~~vv~~~~~~~~~~~~~~~ga~~  364 (408)
                      .....++.++|-+|+|. |..+..+++.. |. +++.++.++...+.+++.+...
T Consensus        80 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~  132 (269)
T 1p91_A           80 ERLDDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQV  132 (269)
T ss_dssp             HHSCTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTS
T ss_pred             HhcCCCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCc
Confidence            11126788999999877 88888888876 55 5999999999999887766443

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=95.90  E-value=0.015  Score=53.82  Aligned_cols=76  Identities=17%  Similarity=0.093  Sum_probs=48.1

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH---HHHHHcCC---CeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL---KTAKEMGA---DATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~---~~~~~~ga---~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      +.++||+|+ |.+|..+++.+...|.+ |+++.|+.++.   +.+.++..   ...+...|..+.+++.+.+      ++
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~   77 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI------KG   77 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH------TT
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCE-EEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH------cC
Confidence            468999998 99999999999999987 88778876533   22222211   1112222333334444433      26


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|.||++++.
T Consensus        78 ~d~Vih~A~~   87 (337)
T 2c29_D           78 CTGVFHVATP   87 (337)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEEeccc
Confidence            8999998864

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=95.87  E-value=0.012  Score=53.21  Aligned_cols=42  Identities=12%  Similarity=0.061  Sum_probs=37.7

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA  357 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~  357 (408)
                      .+++++|+|+|+.|..++..+...|+++|.++.|+.+|.+.+
T Consensus       121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~L  162 (282)
T 3fbt_A          121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI  162 (282)
T ss_dssp             TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            467899999999999999999999998899999999887665

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.86  E-value=0.023  Score=55.18  Aligned_cols=76  Identities=14%  Similarity=0.096  Sum_probs=50.9

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      +.+++|+|+|++|..+++.+...|++ |++.+|+.++.+.+. +++....+. -+..+.+++.+.+      +++|+|++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~~-V~v~~R~~~~a~~la~~~~~~~~~~-~Dv~d~~~l~~~l------~~~DvVIn   74 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGIK-VTVACRTLESAKKLSAGVQHSTPIS-LDVNDDAALDAEV------AKHDLVIS   74 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCE-EEEEESSHHHHHHTTTTCTTEEEEE-CCTTCHHHHHHHH------TTSSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcCE-EEEEECCHHHHHHHHHhcCCceEEE-eecCCHHHHHHHH------cCCcEEEE
Confidence            46789998899999999999888976 888999988776553 233211221 1222334444433      26999999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      |++..
T Consensus        75 ~a~~~   79 (450)
T 1ff9_A           75 LIPYT   79 (450)
T ss_dssp             CCC--
T ss_pred             CCccc
Confidence            99853

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.85  E-value=0.0089  Score=53.29  Aligned_cols=65  Identities=9%  Similarity=0.233  Sum_probs=47.5

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      +++|+|+|+.|..++..+...|+++|.+++|+.+|.+.+.+ ++.   ...      ++..+.+      ..+|+||+|+
T Consensus       110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~------~~~~~~~------~~aDiVInat  174 (253)
T 3u62_A          110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL------DQLDEVV------KKAKSLFNTT  174 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG------GGHHHHH------HTCSEEEECS
T ss_pred             eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH------HHHHhhh------cCCCEEEECC
Confidence            89999999999999999999999779999999888765422 221   222      3333222      2578888887


Q ss_pred             c
Q psy1413         398 G  398 (408)
Q Consensus       398 g  398 (408)
                      +
T Consensus       175 p  175 (253)
T 3u62_A          175 S  175 (253)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=95.80  E-value=0.012  Score=54.56  Aligned_cols=77  Identities=16%  Similarity=0.222  Sum_probs=50.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCC------CeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGA------SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga------~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      +.++||+|+ |.+|..+++.+...|.      .+|++++|+..+...  ..+....+...|..+.+++.+.+.     .+
T Consensus        14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-----~~   86 (342)
T 2hrz_A           14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--GFSGAVDARAADLSAPGEAEKLVE-----AR   86 (342)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--TCCSEEEEEECCTTSTTHHHHHHH-----TC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--ccCCceeEEEcCCCCHHHHHHHHh-----cC
Confidence            457999999 9999999999999993      348888887543221  112222222233334455554443     37


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|+||+++|..
T Consensus        87 ~d~vih~A~~~   97 (342)
T 2hrz_A           87 PDVIFHLAAIV   97 (342)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            99999999854

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=95.78  E-value=0.053  Score=51.38  Aligned_cols=79  Identities=18%  Similarity=0.177  Sum_probs=51.4

Q ss_pred             CEEEEEec-chhHHHHHHHHH-HhCCCeEEEEecChhh---------HHHH----HHcC-C----C---eEEecCCCCCh
Q psy1413         318 SKVLITGA-GPIGLVTLLTAR-ALGASRVVITDILEHK---------LKTA----KEMG-A----D---ATVLIDRNHSL  374 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~-~~Ga~~vv~~~~~~~~---------~~~~----~~~g-a----~---~~i~~~~~~~~  374 (408)
                      .++||+|+ |.+|..+++.+. ..|.+ |++++|+..+         .+.+    +++. .    .   ..+..-|..+.
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHS-VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCE-EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCE-EEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            37999999 999999999998 89986 8888876443         2322    2221 1    1   22223344455


Q ss_pred             HHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         375 EEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       375 ~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++.+.+.+   .+.+|+||+++|..
T Consensus        82 ~~~~~~~~~---~~~~d~vih~A~~~  104 (397)
T 1gy8_A           82 DFLNGVFTR---HGPIDAVVHMCAFL  104 (397)
T ss_dssp             HHHHHHHHH---SCCCCEEEECCCCC
T ss_pred             HHHHHHHHh---cCCCCEEEECCCcc
Confidence            555555543   12499999999854

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.77  E-value=0.012  Score=54.02  Aligned_cols=69  Identities=19%  Similarity=0.229  Sum_probs=39.4

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      +.++||+|+ |.+|..+++.+...|.+ |++++|+..+.      + ....|.   .+.+++.+.+...    ++|+||+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~------~-~~~~Dl---~d~~~~~~~~~~~----~~d~vih   66 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWH-AVGCGFRRARP------K-FEQVNL---LDSNAVHHIIHDF----QPHVIVH   66 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEC----------------------------CHHHHHHH----CCSEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCe-EEEEccCCCCC------C-eEEecC---CCHHHHHHHHHhh----CCCEEEE
Confidence            457999999 99999999999989976 88888765431      1 111222   2234444444433    6899999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      ++|..
T Consensus        67 ~A~~~   71 (315)
T 2ydy_A           67 CAAER   71 (315)
T ss_dssp             CC---
T ss_pred             CCccc
Confidence            99854

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.76  E-value=0.078  Score=42.91  Aligned_cols=77  Identities=14%  Similarity=0.240  Sum_probs=50.4

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC-hhhHHHHHH-c--CCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL-EHKLKTAKE-M--GADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~~~~~-~--ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ...++|.|+|.+|..+++.+...|.+ |++++++ +++.+.+++ +  |.. ++. .+..+.+    .+.++ +-.++|.
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~~-V~vid~~~~~~~~~~~~~~~~~~~-~i~-gd~~~~~----~l~~a-~i~~ad~   74 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQN-VTVISNLPEDDIKQLEQRLGDNAD-VIP-GDSNDSS----VLKKA-GIDRCRA   74 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCE-EEE-SCTTSHH----HHHHH-TTTTCSE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCC-EEEEECCChHHHHHHHHhhcCCCe-EEE-cCCCCHH----HHHHc-ChhhCCE
Confidence            35688999999999999999999987 8888887 455554432 2  433 332 2222222    22322 1247899


Q ss_pred             EEEcccchh
Q psy1413         393 TIDCSGIES  401 (408)
Q Consensus       393 i~d~~g~~~  401 (408)
                      ++-+++...
T Consensus        75 vi~~~~~d~   83 (153)
T 1id1_A           75 ILALSDNDA   83 (153)
T ss_dssp             EEECSSCHH
T ss_pred             EEEecCChH
Confidence            999888653

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=95.76  E-value=0.0054  Score=57.84  Aligned_cols=96  Identities=17%  Similarity=0.153  Sum_probs=68.4

Q ss_pred             ecCCeEEEEccCccccccccccccccC--------------------------------------cceeEEEccCch---
Q psy1413         100 ICGSDVHYLTHGQIGDFRLSDPMIVGH--------------------------------------EASGIVSKVGAK---  138 (408)
Q Consensus       100 ~~g~~vlv~g~G~vG~~~i~~a~~~G~--------------------------------------~~~~vv~~~g~~---  138 (408)
                      +.+++++|+|+|++|..+++.++.+|+                                      +++.+|++++..   
T Consensus       165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~  244 (361)
T 1pjc_A          165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR  244 (361)
T ss_dssp             BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence            557899999999999988887776664                                      245566666532   


Q ss_pred             ------HHHHhhccCCcEEEEEccCCC-------CcccCHHHHHhcCcEEEEeecCC-------------CcHHHHHHHH
Q psy1413         139 ------VKHLKATRPGGCLVIVGAGSQ-------DVKIPLVLTMTKEIDIRGVFRYA-------------NDYPIALAMV  192 (408)
Q Consensus       139 ------~~~~~~l~~gG~iv~~G~~~~-------~~~~~~~~~~~~~~~l~g~~~~~-------------~~~~~~~~l~  192 (408)
                            .+.++.++++|+++.++....       +.+++...+..+++++.+..+.+             ..++.+++++
T Consensus       245 ~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~~l~~l~  324 (361)
T 1pjc_A          245 APILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYVVKLA  324 (361)
T ss_dssp             CCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence                  246889999999999997543       34566666778899988865322             2245667777


Q ss_pred             HcC
Q psy1413         193 ASG  195 (408)
Q Consensus       193 ~~g  195 (408)
                      ++|
T Consensus       325 ~~G  327 (361)
T 1pjc_A          325 NQG  327 (361)
T ss_dssp             HHG
T ss_pred             hCC
Confidence            766

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=95.73  E-value=0.019  Score=53.17  Aligned_cols=77  Identities=18%  Similarity=0.171  Sum_probs=48.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCC-CeEEEEecCh--hhHHHHHHc--CCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGA-SRVVITDILE--HKLKTAKEM--GADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga-~~vv~~~~~~--~~~~~~~~~--ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      .++||+|+ |.+|..+++.+...|. .+|++++|+.  .+.+.++++  +....+..-|..+.+++.+.+      .++|
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~~d   77 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV------RKVD   77 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH------HTCS
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh------hCCC
Confidence            46999999 9999999999988872 2488888753  122222222  222222233434445554444      3799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +||+++|..
T Consensus        78 ~vih~A~~~   86 (336)
T 2hun_A           78 GVVHLAAES   86 (336)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCc
Confidence            999999854

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.73  E-value=0.021  Score=52.39  Aligned_cols=76  Identities=14%  Similarity=0.084  Sum_probs=47.4

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-Chhh---HHHHHHcC---CCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHK---LKTAKEMG---ADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~---~~~~~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      +.++||+|+ |.+|..+++.+...|.+ |+++.| +.++   .+.+.++.   ....+...|..+.+++.+.+      +
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYS-VNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAI------E   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHH------T
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCE-EEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHH------c
Confidence            467999999 99999999999999987 887777 5422   22222221   11122223333445555444      2


Q ss_pred             CCceEEEcccc
Q psy1413         389 QPDKTIDCSGI  399 (408)
Q Consensus       389 ~~d~i~d~~g~  399 (408)
                      ++|+||++++.
T Consensus        74 ~~d~vih~A~~   84 (322)
T 2p4h_X           74 GCVGIFHTASP   84 (322)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEEcCCc
Confidence            68999999863

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=95.71  E-value=0.026  Score=53.91  Aligned_cols=72  Identities=21%  Similarity=0.300  Sum_probs=53.2

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      -.+.+++|+|.|.+|..+++.++.+|++ |+++++++.+...+...|....          +    +.++.  +..|+++
T Consensus       209 L~GktVgIiG~G~IG~~vA~~Lka~Ga~-Viv~D~~p~~a~~A~~~G~~~~----------s----L~eal--~~ADVVi  271 (436)
T 3h9u_A          209 IAGKTACVCGYGDVGKGCAAALRGFGAR-VVVTEVDPINALQAAMEGYQVL----------L----VEDVV--EEAHIFV  271 (436)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHTTCEEC----------C----HHHHT--TTCSEEE
T ss_pred             ccCCEEEEEeeCHHHHHHHHHHHHCCCE-EEEECCChhhhHHHHHhCCeec----------C----HHHHH--hhCCEEE
Confidence            3578999999999999999999999997 9999998877776666665321          1    22222  3578888


Q ss_pred             Ecccchhhh
Q psy1413         395 DCSGIESTI  403 (408)
Q Consensus       395 d~~g~~~~~  403 (408)
                      .+++....+
T Consensus       272 lt~gt~~iI  280 (436)
T 3h9u_A          272 TTTGNDDII  280 (436)
T ss_dssp             ECSSCSCSB
T ss_pred             ECCCCcCcc
Confidence            777655443

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=95.70  E-value=0.047  Score=53.46  Aligned_cols=39  Identities=23%  Similarity=0.165  Sum_probs=32.7

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHh---CCCeEEEEecChhhH
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARAL---GASRVVITDILEHKL  354 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~---Ga~~vv~~~~~~~~~  354 (408)
                      ..+.++||+|+ |.+|..+++.+...   |.+ |++++|++.+.
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~-V~~l~R~~~~~  113 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGR-LICLVRAESDE  113 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCE-EEEEECSSSHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCE-EEEEECCCCcH
Confidence            45689999999 99999999988888   776 99999876543

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=95.66  E-value=0.025  Score=49.24  Aligned_cols=75  Identities=20%  Similarity=0.244  Sum_probs=52.0

Q ss_pred             CCCEEEEEec-----------------chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHH
Q psy1413         316 LGSKVLITGA-----------------GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       316 ~~~~~lv~G~-----------------G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                      .+.++||+||                 |++|..+++.+...|++ |+++++... ++.  ..|. .+++.   .+.+++.
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~-V~l~~~~~~-l~~--~~g~-~~~dv---~~~~~~~   78 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN-VTLVSGPVS-LPT--PPFV-KRVDV---MTALEME   78 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE-EEEEECSCC-CCC--CTTE-EEEEC---CSHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCE-EEEEECCcc-ccc--CCCC-eEEcc---CcHHHHH
Confidence            4678999977                 78999999999999998 777766442 111  1122 23443   3456777


Q ss_pred             HHHHHHhcCCCCceEEEcccch
Q psy1413         379 THIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       379 ~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +.+.+..  .++|+++++.|..
T Consensus        79 ~~v~~~~--~~~Dili~~Aav~   98 (226)
T 1u7z_A           79 AAVNASV--QQQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHHG--GGCSEEEECCBCC
T ss_pred             HHHHHhc--CCCCEEEECCccc
Confidence            6666654  3699999999865

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.64  E-value=0.015  Score=55.09  Aligned_cols=75  Identities=19%  Similarity=0.124  Sum_probs=50.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      ..++||+|+ |.+|..+++.+...|.+ |++++|+..+.......+.. ++ .-|..+.+++.+.+      +++|+||+
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~v~-~~-~~Dl~d~~~~~~~~------~~~d~Vih   99 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHY-VIASDWKKNEHMTEDMFCDE-FH-LVDLRVMENCLKVT------EGVDHVFN   99 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCSSSCGGGTCSE-EE-ECCTTSHHHHHHHH------TTCSEEEE
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCe-EEEEECCCccchhhccCCce-EE-ECCCCCHHHHHHHh------CCCCEEEE
Confidence            368999999 99999999999999986 88888876543322222232 22 22333344444443      37999999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      +++..
T Consensus       100 ~A~~~  104 (379)
T 2c5a_A          100 LAADM  104 (379)
T ss_dssp             CCCCC
T ss_pred             Cceec
Confidence            98853

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.62  E-value=0.031  Score=53.60  Aligned_cols=77  Identities=17%  Similarity=0.233  Sum_probs=57.9

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ...++|.|.|-+|+.+++.++..|.. |+++++++++.+.+++.|...++  -+..+ .+   .++++ +-..+|.++-+
T Consensus         4 ~~~viIiG~Gr~G~~va~~L~~~g~~-vvvId~d~~~v~~~~~~g~~vi~--GDat~-~~---~L~~a-gi~~A~~viv~   75 (413)
T 3l9w_A            4 GMRVIIAGFGRFGQITGRLLLSSGVK-MVVLDHDPDHIETLRKFGMKVFY--GDATR-MD---LLESA-GAAKAEVLINA   75 (413)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCC-EEEEECCHHHHHHHHHTTCCCEE--SCTTC-HH---HHHHT-TTTTCSEEEEC
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHhCCCeEEE--cCCCC-HH---HHHhc-CCCccCEEEEC
Confidence            35689999999999999999999987 99999999999999988876443  22122 22   23333 34578999999


Q ss_pred             ccchh
Q psy1413         397 SGIES  401 (408)
Q Consensus       397 ~g~~~  401 (408)
                      ++...
T Consensus        76 ~~~~~   80 (413)
T 3l9w_A           76 IDDPQ   80 (413)
T ss_dssp             CSSHH
T ss_pred             CCChH
Confidence            88653

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.59  E-value=0.075  Score=49.18  Aligned_cols=35  Identities=29%  Similarity=0.378  Sum_probs=31.9

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .+.+++|+|+|++|..+++.+.++|.+++.+++..
T Consensus        33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence            45789999999999999999999999999998764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=95.58  E-value=0.03  Score=50.41  Aligned_cols=71  Identities=20%  Similarity=0.201  Sum_probs=49.3

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--Ce-EEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DA-TVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~-~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      .+.+++|+|+|+.|..++..+...|+ +|++.+|+.+|.+.+ ++++.  .. +.+.      ++       +.. ..+|
T Consensus       118 ~~~~vlvlGaGg~g~a~a~~L~~~G~-~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~------~~-------~~~-~~~D  182 (272)
T 1p77_A          118 PNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSM------DS-------IPL-QTYD  182 (272)
T ss_dssp             TTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEG------GG-------CCC-SCCS
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHccccCCeEEeeH------HH-------hcc-CCCC
Confidence            46789999999999999999999995 599999998887655 44442  11 1211      11       111 3789


Q ss_pred             eEEEcccchh
Q psy1413         392 KTIDCSGIES  401 (408)
Q Consensus       392 ~i~d~~g~~~  401 (408)
                      ++|++++...
T Consensus       183 ivIn~t~~~~  192 (272)
T 1p77_A          183 LVINATSAGL  192 (272)
T ss_dssp             EEEECCCC--
T ss_pred             EEEECCCCCC
Confidence            9999998643

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=95.57  E-value=0.025  Score=66.63  Aligned_cols=84  Identities=15%  Similarity=0.037  Sum_probs=63.5

Q ss_pred             CCCCEEEEEec-ch-hHHHHHHHHHHhCCCeEEEEecChhh-----HHH-HHHc---CCCeEEecCCCCChHHHHHHHHH
Q psy1413         315 TLGSKVLITGA-GP-IGLVTLLTARALGASRVVITDILEHK-----LKT-AKEM---GADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       315 ~~~~~~lv~G~-G~-~G~~~~~~~~~~Ga~~vv~~~~~~~~-----~~~-~~~~---ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      -.++++||+|+ +| +|..+++.+...|++ |++++++.++     .+. .+++   |.......-|..+.+++++.+.+
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~-Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGAT-VIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCE-EEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCE-EEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            46789999998 88 999999999999998 8888887655     332 2334   33444445566777888888888


Q ss_pred             Hhc-----CCCCceEEEcccc
Q psy1413         384 LLQ-----GEQPDKTIDCSGI  399 (408)
Q Consensus       384 ~~~-----~~~~d~i~d~~g~  399 (408)
                      +..     .+++|+++|+.|.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCC
T ss_pred             HHhhhhhhcCCCCEEEECCCc
Confidence            754     2479999999997

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=95.57  E-value=0.0064  Score=54.96  Aligned_cols=42  Identities=12%  Similarity=0.076  Sum_probs=36.3

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA  357 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~  357 (408)
                      .+++++|+|+|+.|..++..+...|+++|.+++|+.++.+.+
T Consensus       116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            457899999999999999999999997799999998876543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.56  E-value=0.035  Score=50.03  Aligned_cols=69  Identities=16%  Similarity=0.129  Sum_probs=50.2

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      .++||+|+|.+|..+++.+...|.+ |++++|+..+.+.+...+...+. . |.   .++.        -.++|+||+++
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~-~-D~---~d~~--------~~~~d~vi~~a   71 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGWR-IIGTSRNPDQMEAIRASGAEPLL-W-PG---EEPS--------LDGVTHLLIST   71 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTCE-EEEEESCGGGHHHHHHTTEEEEE-S-SS---SCCC--------CTTCCEEEECC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCCE-EEEEEcChhhhhhHhhCCCeEEE-e-cc---cccc--------cCCCCEEEECC
Confidence            5799999999999999999999986 99999999888777665543332 1 21   1111        24688888887


Q ss_pred             cch
Q psy1413         398 GIE  400 (408)
Q Consensus       398 g~~  400 (408)
                      +..
T Consensus        72 ~~~   74 (286)
T 3ius_A           72 APD   74 (286)
T ss_dssp             CCB
T ss_pred             Ccc
Confidence            643

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=95.55  E-value=0.06  Score=50.36  Aligned_cols=74  Identities=15%  Similarity=0.115  Sum_probs=49.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH--HHHHHc-CCCeEEecCC-CCChHHHHHHHHHHhcCCCCc
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL--KTAKEM-GADATVLIDR-NHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~--~~~~~~-ga~~~i~~~~-~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ..+++|+|+ |.+|..+++.+...|.+ |++++|+.++.  +.+.+. ++. ++. -| ..+.+++.+.+      +++|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~l~~~~~v~-~v~-~D~l~d~~~l~~~~------~~~d   75 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLKGLIAEELQAIPNVT-LFQ-GPLLNNVPLMDTLF------EGAH   75 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSCSHHHHHHHTSTTEE-EEE-SCCTTCHHHHHHHH------TTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECCCChhhHHHHhhcCCcE-EEE-CCccCCHHHHHHHH------hcCC
Confidence            457999999 99999999999888976 88888887665  333332 222 222 23 33444444433      3689


Q ss_pred             eEEEcccc
Q psy1413         392 KTIDCSGI  399 (408)
Q Consensus       392 ~i~d~~g~  399 (408)
                      .||.+.+.
T Consensus        76 ~Vi~~a~~   83 (352)
T 1xgk_A           76 LAFINTTS   83 (352)
T ss_dssp             EEEECCCS
T ss_pred             EEEEcCCC
Confidence            99987764

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=95.55  E-value=0.012  Score=55.62  Aligned_cols=76  Identities=16%  Similarity=0.131  Sum_probs=49.0

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhC-CCeEEEEecChhhHH-HHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALG-ASRVVITDILEHKLK-TAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~G-a~~vv~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      +.++||+|+ |.+|..+++.+...| .+ |++++|+..+.. .++ ......+...|..+.++    +.++.  +++|+|
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~-V~~~~r~~~~~~~~l~-~~~~v~~~~~Dl~d~~~----l~~~~--~~~d~V  103 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVNQ-VHVVDNLLSAEKINVP-DHPAVRFSETSITDDAL----LASLQ--DEYDYV  103 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCSE-EEEECCCTTCCGGGSC-CCTTEEEECSCTTCHHH----HHHCC--SCCSEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCce-EEEEECCCCCchhhcc-CCCceEEEECCCCCHHH----HHHHh--hCCCEE
Confidence            468999999 999999999999999 65 888888755421 111 01222222233333333    33333  379999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |+++|..
T Consensus       104 ih~A~~~  110 (377)
T 2q1s_A          104 FHLATYH  110 (377)
T ss_dssp             EECCCCS
T ss_pred             EECCCcc
Confidence            9999854

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=95.45  E-value=0.024  Score=52.58  Aligned_cols=74  Identities=22%  Similarity=0.042  Sum_probs=47.4

Q ss_pred             EEEEEec-chhHHHHHHHHHHh-CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCCh-HHHHHHHHHHhcCCCCceEEE
Q psy1413         319 KVLITGA-GPIGLVTLLTARAL-GASRVVITDILEHKLKTAKEMGADATVLIDRNHSL-EEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~-Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~-~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      ++||+|+ |.+|..+++.+... |.+ |++++|+..+.+.+.+..--.++. .|..+. +.+.+.+.      ++|+||+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~------~~d~vih   73 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYE-VYGLDIGSDAISRFLNHPHFHFVE-GDISIHSEWIEYHVK------KCDVVLP   73 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCE-EEEEESCCGGGGGGTTCTTEEEEE-CCTTTCSHHHHHHHH------HCSEEEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCE-EEEEeCCcchHHHhhcCCCeEEEe-ccccCcHHHHHhhcc------CCCEEEE
Confidence            6899999 99999999999887 776 888998876654332211112222 222221 23333332      5899999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      ++|..
T Consensus        74 ~A~~~   78 (345)
T 2bll_A           74 LVAIA   78 (345)
T ss_dssp             CBCCC
T ss_pred             ccccc
Confidence            98753

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=95.30  E-value=0.054  Score=55.73  Aligned_cols=79  Identities=20%  Similarity=0.248  Sum_probs=51.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh----HHHHHHc-CCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK----LKTAKEM-GADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~----~~~~~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      +.++||+|+ |.+|..+++.+...|.+ |++++|+..+    .+.++.+ +....+..-|..+.+++.+.+.+.    ++
T Consensus        11 ~~~ilVTGatG~IG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~----~~   85 (699)
T 1z45_A           11 SKIVLVTGGAGYIGSHTVVELIENGYD-CVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY----KI   85 (699)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS----CC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCE-EEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC----CC
Confidence            568999999 99999999999999986 8888876432    2222221 221111223334455666555442    79


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |+||+++|..
T Consensus        86 D~Vih~A~~~   95 (699)
T 1z45_A           86 DSVIHFAGLK   95 (699)
T ss_dssp             CEEEECCSCC
T ss_pred             CEEEECCccc
Confidence            9999999854

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=95.29  E-value=0.038  Score=51.10  Aligned_cols=76  Identities=12%  Similarity=0.022  Sum_probs=47.6

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH---HHHHHcC--CCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL---KTAKEMG--ADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~---~~~~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      +.++||+|+ |.+|..+++.+...|.+ |+++.|+.++.   ..+.++.  ....+...|..+.+++.+.+      .++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~~   81 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYA-VNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPI------AGC   81 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCE-EEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHH------TTC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCE-EEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHH------cCC
Confidence            578999999 99999999999999987 77777765432   2222221  11112222322333343333      268


Q ss_pred             ceEEEcccc
Q psy1413         391 DKTIDCSGI  399 (408)
Q Consensus       391 d~i~d~~g~  399 (408)
                      |+||++++.
T Consensus        82 D~Vih~A~~   90 (338)
T 2rh8_A           82 DFVFHVATP   90 (338)
T ss_dssp             SEEEEESSC
T ss_pred             CEEEEeCCc
Confidence            999998864

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=95.24  E-value=0.0094  Score=55.39  Aligned_cols=34  Identities=9%  Similarity=0.009  Sum_probs=28.2

Q ss_pred             CCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         317 GSKVLITGA-G--PIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       317 ~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ++++||+|+ +  |+|+.+++.+...|++ |++.++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~-Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVK-IIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCE-EEEEecCc
Confidence            578999997 4  9999999999999998 77665443

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.20  E-value=0.06  Score=50.09  Aligned_cols=45  Identities=31%  Similarity=0.220  Sum_probs=39.5

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCC
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGAD  363 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~  363 (408)
                      .++.|+|.|.+|.++++.++..|.+ |++.+++.++.+.++++|+.
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~~-V~~~dr~~~~~~~a~~~G~~   53 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANHS-VFGYNRSRSGAKSAVDEGFD   53 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCC-EEEECSCHHHHHHHHHTTCC
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCe
Confidence            4689999999999999999999976 99999999988888777763

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=95.20  E-value=0.026  Score=51.70  Aligned_cols=70  Identities=21%  Similarity=0.288  Sum_probs=47.5

Q ss_pred             EEEEEec-chhHHHHHHHHHHh--CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         319 KVLITGA-GPIGLVTLLTARAL--GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~--Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      ++||+|+ |.+|..+++.+...  |.+ |++++++..+.+     +.. ++ .-|..+.+++.+.+.+    .++|+||+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~-----~~~-~~-~~D~~d~~~~~~~~~~----~~~d~vih   68 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKN-VIASDIVQRDTG-----GIK-FI-TLDVSNRDEIDRAVEK----YSIDAIFH   68 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGG-EEEEESSCCCCT-----TCC-EE-ECCTTCHHHHHHHHHH----TTCCEEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCE-EEEecCCCcccc-----Cce-EE-EecCCCHHHHHHHHhh----cCCcEEEE
Confidence            4799999 99999999988877  665 888887654432     232 22 2233344555555543    37999999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      +++..
T Consensus        69 ~a~~~   73 (317)
T 3ajr_A           69 LAGIL   73 (317)
T ss_dssp             CCCCC
T ss_pred             CCccc
Confidence            99853

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=95.19  E-value=0.041  Score=50.86  Aligned_cols=75  Identities=15%  Similarity=0.159  Sum_probs=46.5

Q ss_pred             EEEEEec-chhHHHHHHHHHHh---C---CCeEEEEecChh--hHHHHHHc--CCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         319 KVLITGA-GPIGLVTLLTARAL---G---ASRVVITDILEH--KLKTAKEM--GADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~---G---a~~vv~~~~~~~--~~~~~~~~--ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      ++||+|+ |.+|..+++.+...   |   .+ |++++|+..  +.+.++++  +....+..-|..+.+++.+.+      
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADE-VIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSE-EEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceE-EEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh------
Confidence            5899999 99999999988885   6   54 888887532  11222222  122222223333444443333      


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|+||+++|..
T Consensus        75 ~~~d~Vih~A~~~   87 (337)
T 1r6d_A           75 RGVDAIVHFAAES   87 (337)
T ss_dssp             TTCCEEEECCSCC
T ss_pred             cCCCEEEECCCcc
Confidence            4799999999854

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=95.16  E-value=0.039  Score=51.19  Aligned_cols=81  Identities=16%  Similarity=0.157  Sum_probs=51.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCC-eEEEEecCh--hhHHHHHHcC--CCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGAS-RVVITDILE--HKLKTAKEMG--ADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~-~vv~~~~~~--~~~~~~~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      .+.++||+|+ |.+|..+++.+...|.. +|+..+++.  ...+.++.+.  ....+..-|..+.+++.+.+..    .+
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~   98 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE----RD   98 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH----HT
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh----cC
Confidence            3467999999 99999999999999943 366666653  2222222221  1222333444455666666554    26


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|+||++++..
T Consensus        99 ~d~Vih~A~~~  109 (346)
T 4egb_A           99 VQVIVNFAAES  109 (346)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCccc
Confidence            99999998854

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=95.14  E-value=0.024  Score=51.14  Aligned_cols=60  Identities=20%  Similarity=0.282  Sum_probs=43.8

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      ++||+|+ |.+|..+++.+...|.+ |++++|..                 -|..+.+++.+.+.+.    ++|+||+++
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~-----------------~D~~d~~~~~~~~~~~----~~d~vi~~a   64 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYD-IYPFDKKL-----------------LDITNISQVQQVVQEI----RPHIIIHCA   64 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEE-EEEECTTT-----------------SCTTCHHHHHHHHHHH----CCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE-EEEecccc-----------------cCCCCHHHHHHHHHhc----CCCEEEECC
Confidence            7999999 99999999999988976 88888721                 1222345555555443    688888887


Q ss_pred             cch
Q psy1413         398 GIE  400 (408)
Q Consensus       398 g~~  400 (408)
                      +..
T Consensus        65 ~~~   67 (287)
T 3sc6_A           65 AYT   67 (287)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=95.07  E-value=0.056  Score=50.14  Aligned_cols=76  Identities=13%  Similarity=0.163  Sum_probs=47.6

Q ss_pred             CEEEEEec-chhHHHHHHHHHHh--CCCeEEEEecChh--hHHHHHHcC-CCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARAL--GASRVVITDILEH--KLKTAKEMG-ADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~--Ga~~vv~~~~~~~--~~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      .++||+|+ |.+|..+++.+...  |.+ |++++|+..  ..+.++++. ....+..-|..+.+++.+.+      +++|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~~d   77 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVH-VTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLA------AKAD   77 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCE-EEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHH------TTCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCE-EEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHh------hcCC
Confidence            47999999 99999999998888  665 888888642  122222221 12222223333444444333      2579


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +||+++|..
T Consensus        78 ~vih~A~~~   86 (348)
T 1oc2_A           78 AIVHYAAES   86 (348)
T ss_dssp             EEEECCSCC
T ss_pred             EEEECCccc
Confidence            999999854

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=94.94  E-value=0.074  Score=48.83  Aligned_cols=34  Identities=18%  Similarity=0.230  Sum_probs=29.3

Q ss_pred             CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .++++||+|+   +++|..+++.+...|++ |++++|+
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~-Vv~~~r~   44 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGAR-VALGTWP   44 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCE-EEEEECH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCE-EEEEecc
Confidence            4678999985   89999999999999997 8888765

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=94.94  E-value=0.036  Score=51.77  Aligned_cols=48  Identities=25%  Similarity=0.356  Sum_probs=40.2

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCC
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGAD  363 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~  363 (408)
                      -.++++.|.|.|.+|+.+++.++.+|++ |++.+++..+.++.+++|++
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Gak-VvvsD~~~~~~~~a~~~ga~  220 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGAQ-LLVADTDTERVAHAVALGHT  220 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHTTCE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCE-EEEEeCCccHHHHHHhcCCE
Confidence            4678999999999999999999999997 77888887765666667754

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=94.89  E-value=0.1  Score=45.00  Aligned_cols=75  Identities=13%  Similarity=0.058  Sum_probs=53.3

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      +++|.|+|.+|..+++.+...|.. |+++++++++.+.+. +.|.. ++.. +..+.+    .++++ +-.++|.++-++
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~~-v~vid~~~~~~~~l~~~~~~~-~i~g-d~~~~~----~l~~a-~i~~ad~vi~~~   73 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKYG-VVIINKDRELCEEFAKKLKAT-IIHG-DGSHKE----ILRDA-EVSKNDVVVILT   73 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHSSSE-EEES-CTTSHH----HHHHH-TCCTTCEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHHcCCe-EEEc-CCCCHH----HHHhc-CcccCCEEEEec
Confidence            478999999999999999999987 889999999888764 45654 3332 222222    22332 235789999988


Q ss_pred             cchh
Q psy1413         398 GIES  401 (408)
Q Consensus       398 g~~~  401 (408)
                      +...
T Consensus        74 ~~d~   77 (218)
T 3l4b_C           74 PRDE   77 (218)
T ss_dssp             SCHH
T ss_pred             CCcH
Confidence            8654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=94.88  E-value=0.056  Score=48.14  Aligned_cols=66  Identities=21%  Similarity=0.272  Sum_probs=46.6

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      ++||+|+ |.+|..+++.+. .|.+ |++++|+....     .+  ...   |..+.+++.+.+...    ++|++|+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~-V~~~~r~~~~~-----~~--~~~---Dl~~~~~~~~~~~~~----~~d~vi~~a   65 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHE-VIKVYNSSEIQ-----GG--YKL---DLTDFPRLEDFIIKK----RPDVIINAA   65 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSC-EEEEESSSCCT-----TC--EEC---CTTSHHHHHHHHHHH----CCSEEEECC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCe-EEEecCCCcCC-----CC--cee---ccCCHHHHHHHHHhc----CCCEEEECC
Confidence            5899999 999999999888 4865 88888876421     12  222   333456666666544    689999999


Q ss_pred             cch
Q psy1413         398 GIE  400 (408)
Q Consensus       398 g~~  400 (408)
                      |..
T Consensus        66 ~~~   68 (273)
T 2ggs_A           66 AMT   68 (273)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            854

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=94.88  E-value=0.06  Score=50.68  Aligned_cols=71  Identities=24%  Similarity=0.261  Sum_probs=49.9

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEccc
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG  398 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g  398 (408)
                      +++|+|+|.+|..+++.+... . .|.+.+++.++++.+++......+|..   +.+++.+.+      +++|+|++|++
T Consensus        18 kilvlGaG~vG~~~~~~L~~~-~-~v~~~~~~~~~~~~~~~~~~~~~~d~~---d~~~l~~~~------~~~DvVi~~~p   86 (365)
T 3abi_A           18 KVLILGAGNIGRAIAWDLKDE-F-DVYIGDVNNENLEKVKEFATPLKVDAS---NFDKLVEVM------KEFELVIGALP   86 (365)
T ss_dssp             EEEEECCSHHHHHHHHHHTTT-S-EEEEEESCHHHHHHHTTTSEEEECCTT---CHHHHHHHH------TTCSEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHhcC-C-CeEEEEcCHHHHHHHhccCCcEEEecC---CHHHHHHHH------hCCCEEEEecC
Confidence            599999999999999988643 3 588889999988887665433333332   234444333      36899999998


Q ss_pred             ch
Q psy1413         399 IE  400 (408)
Q Consensus       399 ~~  400 (408)
                      ..
T Consensus        87 ~~   88 (365)
T 3abi_A           87 GF   88 (365)
T ss_dssp             GG
T ss_pred             Cc
Confidence            54

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=94.82  E-value=0.052  Score=53.81  Aligned_cols=71  Identities=18%  Similarity=0.259  Sum_probs=48.0

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .+.+++|+|+||+|..++..+...|++ |++++|+.++.+.+ ++++.. +++..+      +    .+. ....+|+++
T Consensus       363 ~~k~vlV~GaGGig~aia~~L~~~G~~-V~i~~R~~~~a~~la~~~~~~-~~~~~d------l----~~~-~~~~~DilV  429 (523)
T 2o7s_A          363 ASKTVVVIGAGGAGKALAYGAKEKGAK-VVIANRTYERALELAEAIGGK-ALSLTD------L----DNY-HPEDGMVLA  429 (523)
T ss_dssp             ---CEEEECCSHHHHHHHHHHHHHCC--CEEEESSHHHHHHHHHHTTC--CEETTT------T----TTC---CCSEEEE
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHcCCc-eeeHHH------h----hhc-cccCceEEE
Confidence            356799999999999999999999995 88899998887655 455542 233221      1    110 123589999


Q ss_pred             Ecccc
Q psy1413         395 DCSGI  399 (408)
Q Consensus       395 d~~g~  399 (408)
                      +++|.
T Consensus       430 N~agv  434 (523)
T 2o7s_A          430 NTTSM  434 (523)
T ss_dssp             ECSST
T ss_pred             ECCCC
Confidence            99985

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=94.77  E-value=0.022  Score=53.84  Aligned_cols=97  Identities=18%  Similarity=0.208  Sum_probs=60.5

Q ss_pred             eecCCeEEEEccCccccccccccccccC--------------------------------------cceeEEEccCch--
Q psy1413          99 GICGSDVHYLTHGQIGDFRLSDPMIVGH--------------------------------------EASGIVSKVGAK--  138 (408)
Q Consensus        99 ~~~g~~vlv~g~G~vG~~~i~~a~~~G~--------------------------------------~~~~vv~~~g~~--  138 (408)
                      ++.+.+++|+|+|.+|..+++.++.+|+                                      +++.++.+++..  
T Consensus       163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~  242 (369)
T 2eez_A          163 GVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGA  242 (369)
T ss_dssp             BBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence            3567899999999999888777665554                                      245566666532  


Q ss_pred             -------HHHHhhccCCcEEEEEccCCC-------CcccCHHHHHhcCcEEEEeecCC-------------CcHHHHHHH
Q psy1413         139 -------VKHLKATRPGGCLVIVGAGSQ-------DVKIPLVLTMTKEIDIRGVFRYA-------------NDYPIALAM  191 (408)
Q Consensus       139 -------~~~~~~l~~gG~iv~~G~~~~-------~~~~~~~~~~~~~~~l~g~~~~~-------------~~~~~~~~l  191 (408)
                             .+.++.++++|+++.+|....       +.+++...+..+++++.+..+.+             ..++.++++
T Consensus       243 ~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l  322 (369)
T 2eez_A          243 KAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKL  322 (369)
T ss_dssp             ---CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHH
Confidence                   256889999999999996543       34455556677889988765322             235666677


Q ss_pred             HHcC
Q psy1413         192 VASG  195 (408)
Q Consensus       192 ~~~g  195 (408)
                      +.+|
T Consensus       323 ~~~g  326 (369)
T 2eez_A          323 AEKG  326 (369)
T ss_dssp             HHHT
T ss_pred             HhcC
Confidence            7665

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=94.77  E-value=0.1  Score=51.89  Aligned_cols=34  Identities=29%  Similarity=0.410  Sum_probs=31.0

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      +.+++|+|+||+|..+++.+.+.|.+++.++|..
T Consensus       327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D  360 (598)
T 3vh1_A          327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG  360 (598)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4789999999999999999999999999999643

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=94.74  E-value=0.15  Score=50.84  Aligned_cols=35  Identities=29%  Similarity=0.378  Sum_probs=32.0

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .+.+++|+|+||+|..+++.+.++|.+++.++|..
T Consensus       325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D  359 (615)
T 4gsl_A          325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG  359 (615)
T ss_dssp             HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            45789999999999999999999999999999864

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=94.72  E-value=0.056  Score=49.33  Aligned_cols=74  Identities=23%  Similarity=0.218  Sum_probs=48.5

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ++||+|+ |.+|..+++.+...|.+ |++++|... +.+.+. .+.. ++ .-|..+.+++.+.+.+    .++|.+|++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~-~~~~-~~-~~Dl~~~~~~~~~~~~----~~~d~vi~~   73 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLE-VAVLDNLATGKRENVP-KGVP-FF-RVDLRDKEGVERAFRE----FRPTHVSHQ   73 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCE-EEEECCCSSCCGGGSC-TTCC-EE-CCCTTCHHHHHHHHHH----HCCSEEEEC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCE-EEEEECCCcCchhhcc-cCeE-EE-ECCCCCHHHHHHHHHh----cCCCEEEEC
Confidence            5899999 99999999999989987 888877432 221111 1222 22 2333445556665543    268999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      ++..
T Consensus        74 a~~~   77 (311)
T 2p5y_A           74 AAQA   77 (311)
T ss_dssp             CSCC
T ss_pred             cccc
Confidence            8753

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=94.72  E-value=0.026  Score=50.92  Aligned_cols=70  Identities=21%  Similarity=0.328  Sum_probs=45.9

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      .++||+|+|.+|..+++.+...|.+ |++++|+.++..    .+...+  .-|..+.+++.+.+    . ..+|+||+++
T Consensus         4 ~~ilVtGaG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~----~~~~~~--~~Dl~d~~~~~~~~----~-~~~d~vih~a   71 (286)
T 3gpi_A            4 SKILIAGCGDLGLELARRLTAQGHE-VTGLRRSAQPMP----AGVQTL--IADVTRPDTLASIV----H-LRPEILVYCV   71 (286)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCC-EEEEECTTSCCC----TTCCEE--ECCTTCGGGCTTGG----G-GCCSEEEECH
T ss_pred             CcEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCccccc----cCCceE--EccCCChHHHHHhh----c-CCCCEEEEeC
Confidence            4799999999999999999999987 888988866521    222222  12222233333322    1 2488888887


Q ss_pred             cc
Q psy1413         398 GI  399 (408)
Q Consensus       398 g~  399 (408)
                      +.
T Consensus        72 ~~   73 (286)
T 3gpi_A           72 AA   73 (286)
T ss_dssp             HH
T ss_pred             CC
Confidence            64

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=94.71  E-value=0.078  Score=46.25  Aligned_cols=77  Identities=13%  Similarity=0.117  Sum_probs=52.2

Q ss_pred             CCCEEEEEec-----------------chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHH
Q psy1413         316 LGSKVLITGA-----------------GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       316 ~~~~~lv~G~-----------------G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                      .+.++||+||                 |.+|..+++.+..+|++ |+++++....... ...|. .+++   ..+.+++.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~-V~lv~~~~~~~~~-~~~~~-~~~~---v~s~~em~   75 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYE-VCLITTKRALKPE-PHPNL-SIRE---ITNTKDLL   75 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCE-EEEEECTTSCCCC-CCTTE-EEEE---CCSHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCE-EEEEeCCcccccc-CCCCe-EEEE---HhHHHHHH
Confidence            3567888865                 57999999999999998 8888775432110 00122 2333   33567887


Q ss_pred             HHHHHHhcCCCCceEEEcccch
Q psy1413         379 THIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       379 ~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +.+.+..  .++|++|.+.+..
T Consensus        76 ~~v~~~~--~~~Dili~aAAvs   95 (232)
T 2gk4_A           76 IEMQERV--QDYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHHHG--GGCSEEEECSBCC
T ss_pred             HHHHHhc--CCCCEEEEcCccc
Confidence            8777765  3699999998854

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=94.69  E-value=0.029  Score=52.46  Aligned_cols=79  Identities=14%  Similarity=0.204  Sum_probs=45.6

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHc-CCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEM-GADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      +.++||+|+ |.+|..+++.+...|..+|++++|+..+.+ ++.+ +.....|..+   .+.+++.+... ...++|+||
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~d~~~---~~~~~~~~~~~-~~~~~d~Vi  120 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVDLNIADYMDK---EDFLIQIMAGE-EFGDVEAIF  120 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGGTTTSCCSEEEEH---HHHHHHHHTTC-CCSSCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhcccCceEeeecCc---HHHHHHHHhhc-ccCCCCEEE
Confidence            467999999 999999999999999334888888654421 1111 1211112211   12222222110 013699999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      +++|..
T Consensus       121 h~A~~~  126 (357)
T 2x6t_A          121 HEGACS  126 (357)
T ss_dssp             ECCSCC
T ss_pred             ECCccc
Confidence            998854

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.68  E-value=0.01  Score=51.06  Aligned_cols=37  Identities=22%  Similarity=0.198  Sum_probs=31.9

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCC-CeEEEEecChhh
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGA-SRVVITDILEHK  353 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga-~~vv~~~~~~~~  353 (408)
                      +.+++|+|+ |.+|..+++.+...|. .+|++++|+..+
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~   43 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA   43 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc
Confidence            468999999 9999999999999998 258888888765

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=94.65  E-value=0.02  Score=55.09  Aligned_cols=37  Identities=16%  Similarity=0.157  Sum_probs=31.2

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH  352 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~  352 (408)
                      .+..++||+|+ |.+|..+++.+...|++ |++++|+..
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~~R~~~  104 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHR-IYCFIRADN  104 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEE-EEEEEECSS
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCE-EEEEECCCC
Confidence            34568999999 99999999999777886 888888866

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	408
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	5e-20
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	1e-07
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	4e-17
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	3e-13
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	2e-16
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	4e-12
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	3e-16
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	1e-15
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	7e-13
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	1e-04
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	1e-12
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	6e-08
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	8e-12
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	2e-11
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	6e-11
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	7e-11
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-10
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	2e-10
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	3e-10
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	2e-09
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	5e-09
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	1e-08
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	7e-07
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-06
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	1e-06
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	3e-06
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	5e-06
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	7e-06
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-05
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	4e-04
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-05
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	2e-05
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	4e-05
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-04
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	4e-04
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	5e-04
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	0.001
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	0.001
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	0.001
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	0.002
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	0.003

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (209), Expect = 5e-20
 Identities = 48/107 (44%), Positives = 61/107 (57%), Gaps = 2/107 (1%)

Query: 223 AGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD 282
            G+++K +   DRVAIEPG P     +CK GRYNL   IFFCATPPD GNL R+Y+H A 
Sbjct: 78  VGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAA 137

Query: 283 FCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIG 329
           FC+KLPD+V         PL   + A       LG K+++    P  
Sbjct: 138 FCYKLPDNVKPLV-THRFPLEKALEAFETFKKGLGLKIML-KCDPSD 182

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 1e-07
 Identities = 56/159 (35%), Positives = 76/159 (47%), Gaps = 6/159 (3%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           E  PI +P  +EVLL MH VGICGSDVHY  +G+IG+F +  PM++GHEASG V KVG+ 
Sbjct: 22  ENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSS 81

Query: 139 VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVD 198
           VKHLK              + +        ++  I          +        A+    
Sbjct: 82  VKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYK 141

Query: 199 VKKLITHN----YLLEDTLHAFETAKTGAGNAIKVMIHC 233
           +   +       + LE  L AFET K G G   K+M+ C
Sbjct: 142 LPDNVKPLVTHRFPLEKALEAFETFKKGLGL--KIMLKC 178

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 4e-17
 Identities = 61/117 (52%), Positives = 86/117 (73%), Gaps = 2/117 (1%)

Query: 291 VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
           V+ EEGAL+EPLSVG+HACRR GVTLG KVL+ GAGPIG+VTLL A+A+GA++VV+TD+ 
Sbjct: 1   VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS 60

Query: 351 EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
             +L  AKE+GAD  + I +     +     +E   G +P+ TI+C+G E++I+ G+
Sbjct: 61  ATRLSKAKEIGADLVLQISKES--PQEIARKVEGQLGCKPEVTIECTGAEASIQAGI 115

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.3 bits (158), Expect = 3e-13
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 3/77 (3%)

Query: 125 GHEASGIVSKVGAKVKH---LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY 181
           G +    +   GA+      + ATR GG LV+VG GS+   +PL+    +E+DI+GVFRY
Sbjct: 95  GCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY 154

Query: 182 ANDYPIALAMVASGKVD 198
            N +P+A++M+AS  V+
Sbjct: 155 CNTWPVAISMLASKSVN 171

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 74.2 bits (181), Expect = 2e-16
 Identities = 63/117 (53%), Positives = 77/117 (65%), Gaps = 1/117 (0%)

Query: 291 VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
           VSLEEGALLEPLSVGVHACRRAGV LG+ VL+ GAGPIGLV++L A+A GA  V      
Sbjct: 1   VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARS- 59

Query: 351 EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
             +L+ AK  GAD T+++D     E      I    G+ P+ TIDCSG E  I +G+
Sbjct: 60  PRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGI 116

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 61.9 bits (149), Expect = 4e-12
 Identities = 34/54 (62%), Positives = 40/54 (74%)

Query: 143 KATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGK 196
             TR GG L++VG GSQ V +PLV    +EIDI+ VFRY NDYPIAL MVASG+
Sbjct: 117 NITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGR 170

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 74.5 bits (182), Expect = 3e-16
 Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 16/124 (12%)

Query: 230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQI---------FFCATPPDHGNLSRYYR-- 278
           +   D V++   V C  C  CKE    +C  +          +       G  + Y    
Sbjct: 82  LQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVP 141

Query: 279 HAADFCHKLPDHVS-LEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTAR 337
           +A     KLPD    +E+  + E + V V +   A    G       AG      +   +
Sbjct: 142 YADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAPRGYG----EFDAGVPKKFVIDPHK 197

Query: 338 ALGA 341
              A
Sbjct: 198 TFSA 201

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 73.0 bits (178), Expect = 1e-15
 Identities = 16/119 (13%), Positives = 36/119 (30%), Gaps = 12/119 (10%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G  +  +   D+V       C +C  CK    N C +    A      +++  +      
Sbjct: 77  GAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKP 136

Query: 284 CHKLPDHVSLEEGALLEPLSVGV------------HACRRAGVTLGSKVLITGAGPIGL 330
            + L    +  E  ++  ++V                     +    ++L +G G   +
Sbjct: 137 IYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQINKAFELLSSGQGVRSI 195

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.9 bits (157), Expect = 7e-13
 Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 7/114 (6%)

Query: 220 KTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPD------HGNL 273
           K G  +   + +            C  C  CK      C +     + P        G  
Sbjct: 76  KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGY 135

Query: 274 SRYYRHAADFCHKLPDHVSLEEGALLEP-LSVGVHACRRAGVTLGSKVLITGAG 326
           + Y R    F   +P+++ +E   + E  +        +  V     ++     
Sbjct: 136 ANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDKE 189

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.6 bits (94), Expect = 1e-04
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 4/68 (5%)

Query: 74  SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVS 133
           + +  +  P +   DH++ +++   G+CGSD+H    G  G+ ++  P++VGHE  G V 
Sbjct: 20  NPKKTKYDP-KPFYDHDIDIKIEACGVCGSDIHCA-AGHWGNMKM--PLVVGHEIVGKVV 75

Query: 134 KVGAKVKH 141
           K+G K   
Sbjct: 76  KLGPKSNS 83

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 63.9 bits (154), Expect = 1e-12
 Identities = 48/93 (51%), Positives = 62/93 (66%), Gaps = 1/93 (1%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           DRVA+EPGVPCR C +CKEG+YNLC  + FCATPPD GNL+RYY HAADFCHKLPD+ ++
Sbjct: 83  DRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNV 142

Query: 294 EEGALL-EPLSVGVHACRRAGVTLGSKVLITGA 325
           ++       L   V A   A     + + +  +
Sbjct: 143 KQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 175

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 50.0 bits (118), Expect = 6e-08
 Identities = 61/161 (37%), Positives = 76/161 (47%), Gaps = 6/161 (3%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           EQ+PI +P + EVLL+M  VGICGSDVHY  HG+I DF + DPM++GHEASG V KVG  
Sbjct: 16  EQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKN 75

Query: 139 VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVD 198
           VKHLK          V              +  ++          +        A     
Sbjct: 76  VKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHK 135

Query: 199 VKKLITHNYL------LEDTLHAFETAKTGAGNAIKVMIHC 233
           +        L      LE T+ AFE A+  A N IKVMI C
Sbjct: 136 LPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISC 176

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 61.4 bits (148), Expect = 8e-12
 Identities = 19/127 (14%), Positives = 33/127 (25%), Gaps = 14/127 (11%)

Query: 205 HNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGR-YNLCRQIFF 263
                E      E          +++   D +    G+ C  C +CK  +   LC     
Sbjct: 60  IILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV 119

Query: 264 -------CATPPDHGNLSRYYR-HAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVT 315
                     P   G  S +          K+ + ++        PL     A       
Sbjct: 120 YGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL-----PLKEANKALELMESR 174

Query: 316 LGSKVLI 322
              KV++
Sbjct: 175 EALKVIL 181

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 60.1 bits (144), Expect = 2e-11
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 3/90 (3%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
           D V + P V   TC  C+ G    C  + F     D G  + + R +     KLP  V +
Sbjct: 83  DPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGF-AEFMRTSHRSVIKLPKDVRV 141

Query: 294 EEGA-LLEPLSVGVHACRRAGVTLGSKVLI 322
           E     L+ ++  +    +  V LG  VLI
Sbjct: 142 EVDIHKLDEINDVLERLEKGEV-LGRAVLI 170

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 59.2 bits (142), Expect = 6e-11
 Identities = 19/121 (15%), Positives = 31/121 (25%), Gaps = 22/121 (18%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDH------------- 270
           G  +      ++V       C  C +C+  + N C + +   +P                
Sbjct: 78  GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRK 137

Query: 271 -------GNLSRYYRHAADFCHKLPDHVSLEEGALL-EPLSVGVHACRRAG-VTLGSKVL 321
                     S+Y         K+   V L+E      PL     A            VL
Sbjct: 138 VLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVL 197

Query: 322 I 322
            
Sbjct: 198 S 198

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 59.1 bits (142), Expect = 7e-11
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 5/111 (4%)

Query: 293 LEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE 351
           + +   L + L  G H    AGV  GS V + GAGP+GL    +AR LGA+ V++ D+  
Sbjct: 1   IRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNP 60

Query: 352 HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402
            +L  AK  G +             +   I  LL   + D  +D  G E+ 
Sbjct: 61  ARLAHAKAQGFEIAD----LSLDTPLHEQIAALLGEPEVDCAVDAVGFEAR 107

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 57.3 bits (137), Expect = 2e-10
 Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 10/89 (11%)

Query: 234 DRVAIEPGVPC-RTCTYCKEGRYNLCRQIFFCATPPDHGNL-------SRYYRHAADFCH 285
           D V +   V   + C  C++G  N C  +      P            S+       +  
Sbjct: 80  DLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVL 139

Query: 286 KLPDHVSLEEGALLEPLSVGVHACRRAGV 314
           ++       E    + ++       R  V
Sbjct: 140 RIRVA--DIEMIRADQINEAYERMLRGDV 166

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 56.8 bits (136), Expect = 2e-10
 Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 4/101 (3%)

Query: 224 GNAIKVMIHCDRVAIE-PGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD 282
           G+ +  +   DRV I      C  C +C  G   LC          + G  + Y     +
Sbjct: 76  GSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGY-AEYVLADPN 134

Query: 283 FCHKLPDHVSLEEGA-LLEPLSVGVHACRRAGVTLGSKVLI 322
           +   LP +V        L+ ++  +    RAG   G  VL 
Sbjct: 135 YVGILPKNVKATIHPGKLDDINQILDQM-RAGQIEGRIVLE 174

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 56.5 bits (135), Expect = 3e-10
 Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 10/110 (9%)

Query: 222 GAGNAIKVMIHCDRVAIEPGVP-------CRTCTYCKEGRYNLCRQIFFCATPPDHGNLS 274
           G G   +V      + +   V        C  C YC  G+  LC            G  +
Sbjct: 63  GVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-GYSVDGGYA 121

Query: 275 RYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITG 324
            Y R AAD+  K+PD+  +E    LE ++       +  +  G  VL   
Sbjct: 122 EYCRAAADYVVKIPDNTIIEV-QPLEKINEVFDRMLKGQIN-GRVVLTLE 169

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 54.2 bits (129), Expect = 2e-09
 Identities = 16/107 (14%), Positives = 27/107 (25%), Gaps = 13/107 (12%)

Query: 230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC--ATPPDHGNLSRYYR--HAADFCH 285
               DRV +    P       + G       +      +    G    Y+    A     
Sbjct: 75  FKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLA 134

Query: 286 KLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVT 332
            LP  V L +      ++   H            +L+    P  L+ 
Sbjct: 135 ILPKDVDLSK-----LVTHVYHGFDHIE----EALLLMKDKPKDLIK 172

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 53.0 bits (126), Expect = 5e-09
 Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 5/118 (4%)

Query: 291 VSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDI 349
           + LE   ++ + ++ G H    A + +GS V++ G G +GL+ +  A+  GA R++    
Sbjct: 1   MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 350 LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
               ++ AK  GA        N+    I   +++L  G+  D+ I   G   T+   +
Sbjct: 61  RPICVEAAKFYGATD----ILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAV 114

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 4/95 (4%)

Query: 230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRH-AADFCHKLP 288
               D VA+ P      C YC+ G  +LC    +       G  + Y       + +KL 
Sbjct: 84  YSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINF-DGAYAEYVIVPHYKYMYKLR 142

Query: 289 DHVSLEEGAL-LEPLSVGVHACRRAGVTLGSKVLI 322
               +    + LE  +  +         +G +VLI
Sbjct: 143 RVKPMITKTMKLEEANEAIDNLENFKA-IGRQVLI 176

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 7e-07
 Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 5/118 (4%)

Query: 293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
            E+  L+    S G  A  +   V  GS  ++ G G +GL  ++  ++ GASR++  D+ 
Sbjct: 4   PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLN 63

Query: 351 EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML 408
           + K + A  +GA   +    +    +  + ++  + G     T +  G   T+   + 
Sbjct: 64  KDKFEKAMAVGATECISPKDS---TKPISEVLSEMTGNNVGYTFEVIGHLETMIDALA 118

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 46.5 bits (109), Expect = 1e-06
 Identities = 11/105 (10%), Positives = 24/105 (22%), Gaps = 5/105 (4%)

Query: 243 PCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPL 302
            C  CT C  G    C + F        G  S            + +     + +     
Sbjct: 90  YCGKCTQCNTGNPAYCSEFFGRNF---SGADSEGNHALCTHDQGVVNDHFFAQSSFATYA 146

Query: 303 SVGVHACRR--AGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
               +   +          V       I    + + + +    ++
Sbjct: 147 LSRENNTVKVTKDFPFDQLVKFYAFDEINQAAIDSRKGITLKPII 191

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 46.0 bits (108), Expect = 1e-06
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 10/115 (8%)

Query: 298 LLEPLSVGVH-----ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEH 352
           LL PL  G+            VT  S  +  GAG +GL  LL A+  GAS ++  DI+E 
Sbjct: 5   LLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVES 64

Query: 353 KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           +L+ AK++GA   +    N   ++    I E+  G   +  ++ +G    +K G+
Sbjct: 65  RLELAKQLGATHVI----NSKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGV 114

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 45.3 bits (106), Expect = 3e-06
 Identities = 17/115 (14%), Positives = 32/115 (27%), Gaps = 29/115 (25%)

Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPP------------------------D 269
           D+V       C+ C  C     NLC ++     P                          
Sbjct: 87  DKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMG 146

Query: 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRA--GVTLGSKVLI 322
             + S+Y   +     ++ D   L+   LL   ++   +   A   +  G  +  
Sbjct: 147 VSSFSQYTVVSEANLARVDDEFDLD---LLVTHALPFESINDAIDLMKEGKSIRT 198

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 44.5 bits (104), Expect = 5e-06
 Identities = 9/66 (13%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 141 HLKATRPGGCLVIVGAGSQDVKIPLVLT---MTKEIDIRGVFRY-ANDYPIALAMVASGK 196
             +  R GG   + G       +P  +    + K    +G++    + +   +++ +   
Sbjct: 117 GSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNY 176

Query: 197 VDVKKL 202
             + KL
Sbjct: 177 QLLSKL 182

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 44.5 bits (104), Expect = 7e-06
 Identities = 17/116 (14%), Positives = 30/116 (25%), Gaps = 16/116 (13%)

Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
           G  +  +   D+V       C  C  CK    N C +           + +  +      
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKP 136

Query: 284 CHKLPDH--------------VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGA 325
            H                     ++    L+PL   V    +     G  +L +G 
Sbjct: 137 IHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINE--GFDLLRSGE 190

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 1e-05
 Identities = 18/115 (15%), Positives = 30/115 (26%), Gaps = 23/115 (20%)

Query: 223 AGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLC---RQIFFCATPPDH--------- 270
            G  +  +   D V       C  C +C   + NLC   R        PD          
Sbjct: 75  VGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGK 134

Query: 271 --------GNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLG 317
                      S Y   A     K+   + ++E       ++      +A   + 
Sbjct: 135 TILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFV---THNLSFDEINKAFELMH 186

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 4e-04
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 79  EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
           E+  +  P  HEV +++    +C +D + L+     D     P+I+GH  +GIV  VG  
Sbjct: 22  EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSG---ADPEGCFPVILGHLGAGIVESVGEG 78

Query: 139 VKH 141
           V  
Sbjct: 79  VTK 81

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 42.6 bits (99), Expect = 2e-05
 Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 5/117 (4%)

Query: 293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
           LE   L+    S G  A    A VT GS   + G G +GL  ++  +  GASR++  DI 
Sbjct: 3   LERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDIN 62

Query: 351 EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
             K   AK +GA   +       L++    +I  L     D ++DC+G   T+K  +
Sbjct: 63  GEKFPKAKALGATDCLN---PRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAV 116

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 42.4 bits (98), Expect = 2e-05
 Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 1/102 (0%)

Query: 95  MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV 154
           +      G+ +      +     +   +   H          A  + +   R GG + +V
Sbjct: 64  LELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALV 123

Query: 155 GAGSQDVKIPLVLTMTKEIDIRGVFRY-ANDYPIALAMVASG 195
           G    D   P+   + K + I G       D   AL     G
Sbjct: 124 GLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEG 165

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 4e-05
 Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 5/117 (4%)

Query: 293 LEEGALLE-PLSVGVHA-CRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
           L++  LL   +S G  A    A +  GS   + G G +GL  ++  +  GASR++  DI 
Sbjct: 3   LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDIN 62

Query: 351 EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           + K   AKE GA   +         +    ++  +     D + +C G    ++  +
Sbjct: 63  KDKFARAKEFGATECINPQDFS---KPIQEVLIEMTDGGVDYSFECIGNVKVMRAAL 116

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 40.2 bits (93), Expect = 1e-04
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 305 GVHA-CRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGAD 363
           G  A    A VT GS   + G G +G   ++  +A GASR++     + K   A E+GA 
Sbjct: 15  GYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT 74

Query: 364 ATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
             +        ++    +I        D  ++C+G
Sbjct: 75  ECLNPKDY---DKPIYEVICEKTNGGVDYAVECAG 106

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 38.8 bits (89), Expect = 4e-04
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 5/114 (4%)

Query: 293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
           L+   LL   +S G  A    A V  GS   + G G +GL  ++   + GA R++  D+ 
Sbjct: 3   LDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLN 62

Query: 351 EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404
             K + AK  GA   V  + +    E  + ++  +     D +++C G    ++
Sbjct: 63  PDKFEKAKVFGATDFVNPNDH---SEPISQVLSKMTNGGVDFSLECVGNVGVMR 113

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 38.4 bits (88), Expect = 5e-04
 Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY-ANDYPIALAMVASGK 196
                  G L+IVG    +++ P +  ++ E+   G       +    + +   GK
Sbjct: 118 PYLLGRMGRLIIVG-YGGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 172

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 37.7 bits (86), Expect = 0.001
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 5/117 (4%)

Query: 293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
           LE+  L+    S G  +  + A VT GS   + G G +GL  ++  +A GA+R++  DI 
Sbjct: 3   LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDIN 62

Query: 351 EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
           + K   AKE+GA   V        ++    ++  +     D + +  G   T+   +
Sbjct: 63  KDKFAKAKEVGATECVN---PQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL 116

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 37.4 bits (85), Expect = 0.001
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVF-RYANDYPIALAMVASGKV 197
             + R GG  V+VG   +++ IP+  T+   I I G       D   AL   A GKV
Sbjct: 111 YNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV 167

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 36.8 bits (84), Expect = 0.001
 Identities = 14/97 (14%), Positives = 23/97 (23%), Gaps = 2/97 (2%)

Query: 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKL 287
           K       + +   V        +EG   +        T    G  S Y R   ++   L
Sbjct: 58  KTYPFVPGIDLAGVVVSSQHPRFREGDEVIATGYEIGVTH--FGGYSEYARLHGEWLVPL 115

Query: 288 PDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITG 324
           P  +      +              G   G  V+   
Sbjct: 116 PKGLERIAQEISLAELPQALKRILRGELRGRTVVRLA 152

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 1/57 (1%)

Query: 141 HLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY-ANDYPIALAMVASGK 196
           + KA    G  V+VG    D+     L    EI   G      +D+   + +  +GK
Sbjct: 114 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 170

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (82), Expect = 0.003
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)

Query: 140 KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYAN---DYPIALAMVASG 195
           K L     GG +++VG+    ++I    TM KE  I GV  +++   ++    A + +G
Sbjct: 112 KDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG 169

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	408
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.81
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.78
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.76
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.75
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.74
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.74
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.74
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.73
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.72
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.72
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.72
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.72
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.72
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.71
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.71
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.71
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.7
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.7
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.69
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.68
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.68
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.67
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.67
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.67
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.65
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.65
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.63
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.63
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.63
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.63
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.6
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.6
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.6
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.59
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.59
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.59
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.58
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.57
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.57
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.57
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.56
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.52
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.51
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.51
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.49
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.48
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.46
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.46
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.42
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.41
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.4
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.4
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.38
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.38
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.35
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.35
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.34
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.3
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.26
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.24
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.24
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.21
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.17
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.16
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.14
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.12
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.11
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.09
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.08
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.02
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.0
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.98
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	98.96
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.94
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.93
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.92
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	98.92
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	98.92
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	98.9
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	98.86
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.7
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	98.65
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.62
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	98.6
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	98.55
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.54
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	98.51
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.49
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	98.49
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	98.48
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	98.47
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	98.47
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.46
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	98.42
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	98.38
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	98.31
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	98.3
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	98.19
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.14
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.12
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.11
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.1
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.1
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.08
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.07
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.07
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.04
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.01
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.01
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.99
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.99
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.99
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.98
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.98
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.98
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.97
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.96
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.94
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.93
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.91
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.91
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.91
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.91
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.91
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.9
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.89
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.89
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.87
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.87
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.87
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.86
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.85
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.85
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.81
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.74
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.73
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.73
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.72
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.7
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.63
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.61
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.57
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.57
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.55
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.52
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.47
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.42
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.41
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.39
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.39
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.31
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.31
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.29
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.29
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.23
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.22
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	97.1
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.06
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.03
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.0
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.94
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	96.89
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.86
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.78
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.71
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.59
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	96.5
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.31
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.29
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.24
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.18
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.12
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.91
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.81
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	95.77
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	95.62
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.6
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	95.55
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.48
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.35
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	95.2
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.17
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.17
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.15
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	95.06
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.05
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.0
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.0
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.81
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	94.8
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	94.77
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.77
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.57
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.57
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	94.55
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.51
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.5
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.49
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.48
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.47
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	94.44
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.42
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.41
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.37
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	94.35
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.33
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.3
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	94.22
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	94.06
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	93.99
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.92
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	93.81
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.72
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.7
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.68
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.64
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.58
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.57
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	93.52
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.45
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.31
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.14
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	92.89
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.82
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	92.79
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.63
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	92.6
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	92.55
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	92.54
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	92.27
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.26
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	92.14
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.08
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	92.08
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	91.94
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	91.9
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	91.72
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	91.61
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	91.57
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.41
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	91.41
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	91.31
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.26
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.16
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	91.06
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	91.04
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.98
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	90.93
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	90.82
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.81
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	90.79
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	90.77
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	90.76
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	90.74
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	90.59
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.56
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.55
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	90.55
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.44
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.15
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	90.12
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	89.77
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	89.62
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	89.61
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	89.47
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.46
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	89.43
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.35
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	89.16
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	88.99
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	88.98
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.98
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	88.9
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.65
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	88.61
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.11
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	88.1
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	87.86
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	87.79
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	87.79
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	87.65
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	87.62
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	87.61
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	87.5
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	87.41
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	87.41
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.31
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.25
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	87.15
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.14
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	87.09
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	86.9
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.82
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	86.82
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	86.72
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.66
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	86.56
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.51
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	86.5
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.31
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.26
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.17
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	86.16
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	86.02
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	86.0
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	85.9
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	85.7
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	85.53
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	85.53
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	85.48
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	85.31
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	85.18
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	84.96
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	84.96
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.76
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	84.54
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	84.41
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	84.41
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	84.39
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	84.0
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	83.77
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	83.65
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	83.63
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	83.59
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	83.09
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.92
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	82.91
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	82.58
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	82.5
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	82.44
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	82.35
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	82.27
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	82.25
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	82.16
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.07
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	81.35
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	81.32
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	81.14
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	81.12
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	80.85
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	80.77
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	80.77
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	80.76
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	80.73
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	80.69
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	80.66
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	80.23

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.81  E-value=2.1e-20  Score=157.66  Aligned_cols=113  Identities=24%  Similarity=0.416  Sum_probs=105.1

Q ss_pred             CCcccccccc-hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413         291 VSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID  369 (408)
Q Consensus       291 ~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~  369 (408)
                      +|+++|++++ +++|+|+++++..++++++++|+|+|++|++++|+++.+|+++|++++++++|++.++++|+++++|++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~   80 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYK   80 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGG
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccccc
Confidence            4778898885 789999999999999999999999999999999999999998899999999999999999999999998


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +    ++..+.++++++++++|++|||+|++.++++++
T Consensus        81 ~----~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~  114 (174)
T d1jqba2          81 N----GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAV  114 (174)
T ss_dssp             G----SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHH
T ss_pred             c----hhHHHHHHHHhhccCcceEEEccCCHHHHHHHH
Confidence            7    778899999999999999999999999888765

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.78  E-value=2.5e-20  Score=158.04  Aligned_cols=171  Identities=56%  Similarity=1.013  Sum_probs=148.8

Q ss_pred             CcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhc
Q psy1413          66 SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKAT  145 (408)
Q Consensus        66 ~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l  145 (408)
                      +.++.+|+.+.+ ++.++|.+.+.++++.+.++++++.++.++-.+..+......+..+|+|+.|+|..+|+..+.++. 
T Consensus         4 aAVl~g~~~l~~-~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~-   81 (178)
T d1e3ja1           4 SAVLYKQNDLRL-EQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK-   81 (178)
T ss_dssp             EEEEEETTEEEE-EECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCT-
T ss_pred             EEEEEcCCcEEE-EEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCC-
Confidence            356778889999 889999999999999999999998887655434444445566778999999999999976544444 


Q ss_pred             cCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCC
Q psy1413         146 RPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGN  225 (408)
Q Consensus       146 ~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~  225 (408)
                                                                                                      
T Consensus        82 --------------------------------------------------------------------------------   81 (178)
T d1e3ja1          82 --------------------------------------------------------------------------------   81 (178)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhh
Q psy1413         226 AIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSV  304 (408)
Q Consensus       226 ~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~  304 (408)
                             +|+|++.+..+|+.|..|..|.+++|.+..+.+....+|+|++|+.++++.++++|++++.++++.+. .+.|
T Consensus        82 -------GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~t  154 (178)
T d1e3ja1          82 -------GDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQ  154 (178)
T ss_dssp             -------TCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGG
T ss_pred             -------CCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHH
Confidence                   99999999999999999999999999999999988889999999999999999999999999988886 7888


Q ss_pred             hhhhhhccCcCCCCEEEEEec
Q psy1413         305 GVHACRRAGVTLGSKVLITGA  325 (408)
Q Consensus       305 ~~~~~~~~~~~~~~~~lv~G~  325 (408)
                      +++++++..++++++++|+|+
T Consensus       155 a~~a~~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         155 TVDAFEAARKKADNTIKVMIS  175 (178)
T ss_dssp             HHHHHHHHHHCCTTCSEEEEE
T ss_pred             HHHHHHHhCCCCCCEEEEEcc
Confidence            999999999999999999975

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=1.1e-18  Score=148.87  Aligned_cols=55  Identities=15%  Similarity=0.242  Sum_probs=48.4

Q ss_pred             CCccceeEEeeccceeeeCCCCCCcccccccch-hhhhhhhhhccCcCCCCEEEEE
Q psy1413         269 DHGNLSRYYRHAADFCHKLPDHVSLEEGALLEP-LSVGVHACRRAGVTLGSKVLIT  323 (408)
Q Consensus       269 ~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~-~~~~~~~~~~~~~~~~~~~lv~  323 (408)
                      .+|+|++|++++++.++++|++++.+.|+++.+ +.++++++.+..+++++++||.
T Consensus       131 ~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~~~~~ta~~~l~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         131 SQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  186 (192)
T ss_dssp             CCCSSBSEEEEEGGGEEECCTTCCEEEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             cccceeeEEEeehHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence            479999999999999999999999988877765 5678888888999999998874

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.8e-19  Score=152.31  Aligned_cols=171  Identities=53%  Similarity=0.914  Sum_probs=145.8

Q ss_pred             CcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhc
Q psy1413          66 SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKAT  145 (408)
Q Consensus        66 ~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l  145 (408)
                      ..++++|+.+.+ ++.++|.+.+.++++.+.++++++.++.++..+..+.........+|+|+.|+|..+|+..+.++. 
T Consensus        10 a~V~~gp~~l~l-~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~-   87 (185)
T d1pl8a1          10 SLVVHGPGDLRL-ENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKP-   87 (185)
T ss_dssp             EEEEEETTEEEE-EECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCCT-
T ss_pred             EEEEeCCCeEEE-EEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeeecc-
Confidence            457888999999 788999999999999999999999888765444445555667778999999999999976444444 


Q ss_pred             cCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCC
Q psy1413         146 RPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGN  225 (408)
Q Consensus       146 ~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~  225 (408)
                                                                                                      
T Consensus        88 --------------------------------------------------------------------------------   87 (185)
T d1pl8a1          88 --------------------------------------------------------------------------------   87 (185)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhh
Q psy1413         226 AIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVG  305 (408)
Q Consensus       226 ~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~  305 (408)
                             +|+|++.+..+|+.|.+|+.|.++.|.+..+++....+|+|++|+.++++.++++|++++.++++.. +++++
T Consensus        88 -------GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~-pl~~a  159 (185)
T d1pl8a1          88 -------GDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF-PLEKA  159 (185)
T ss_dssp             -------TCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEE-EGGGH
T ss_pred             -------cccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHH-HHHHH
Confidence                   9999999999999999999999999999999999888999999999999999999999998887654 45677


Q ss_pred             hhhhhccCcCCCCEEEEEecch
Q psy1413         306 VHACRRAGVTLGSKVLITGAGP  327 (408)
Q Consensus       306 ~~~~~~~~~~~~~~~lv~G~G~  327 (408)
                      +++++....++++++|| |+|+
T Consensus       160 ~~a~~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         160 LEAFETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             HHHHHHHHTTCCSEEEE-ECCT
T ss_pred             HHHHHHhCCCCCCEEEE-EeCC
Confidence            77787788899999988 5554

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.5e-18  Score=144.69  Aligned_cols=115  Identities=55%  Similarity=0.937  Sum_probs=99.3

Q ss_pred             CCcccccccchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         291 VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       291 ~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      +|+++||++++++++++++++..++++++++|+|+|++|+.++|+++.+|+++|++++++++|++.++++|+++++++.+
T Consensus         1 vS~e~Aal~epla~a~~a~~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   80 (171)
T d1pl8a2           1 VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK   80 (171)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccc
Confidence            47789999999999999999999999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                       .+..+..+.+.. +.+.++|++|||+|++.+++.++
T Consensus        81 -~~~~~~~~~~~~-~~g~g~Dvvid~~G~~~~~~~a~  115 (171)
T d1pl8a2          81 -ESPQEIARKVEG-QLGCKPEVTIECTGAEASIQAGI  115 (171)
T ss_dssp             -CCHHHHHHHHHH-HHTSCCSEEEECSCCHHHHHHHH
T ss_pred             -cccccccccccc-cCCCCceEEEeccCCchhHHHHH
Confidence             123333333333 33679999999999999888764

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=2.3e-18  Score=146.12  Aligned_cols=106  Identities=23%  Similarity=0.237  Sum_probs=96.4

Q ss_pred             CCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEe
Q psy1413         291 VSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVL  367 (408)
Q Consensus       291 ~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~  367 (408)
                      +|+++||.++ ...|+|+++. ...+++++++||+|+ |++|++++|+|+.+|++ |++++++++|.+.++++|++++||
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~-Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCE-EEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCe-EeecccchHHHHHHHhcCCeEEEE
Confidence            4788999888 5668888884 568999999999988 89999999999999997 999999999999999999999999


Q ss_pred             cCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         368 IDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      +++    +++.+.++++|+++++|++||++|++.
T Consensus        80 ~~~----~d~~~~v~~~t~g~g~d~v~d~~g~~~  109 (179)
T d1qora2          80 YRE----EDLVERLKEITGGKKVRVVYDSVGRDT  109 (179)
T ss_dssp             TTT----SCHHHHHHHHTTTCCEEEEEECSCGGG
T ss_pred             CCC----CCHHHHHHHHhCCCCeEEEEeCccHHH
Confidence            988    889999999999999999999998764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.74  E-value=5.3e-18  Score=143.03  Aligned_cols=112  Identities=30%  Similarity=0.458  Sum_probs=99.8

Q ss_pred             CCcccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEec
Q psy1413         291 VSLEEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLI  368 (408)
Q Consensus       291 ~~~~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~  368 (408)
                      +|++.+++++| ..|+|+++ +...++++++++|+|+|++|++++|+++.+|+++|++++++++|++.++++|+++++|+
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            35677888886 55677775 67889999999999999999999999999999989999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         369 DRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      ++    +++.+.+++++++ ++|++|||+|++.+++.++
T Consensus        81 ~~----~~~~~~i~~~t~g-g~D~vid~~G~~~~~~~~~  114 (174)
T d1f8fa2          81 KT----QDPVAAIKEITDG-GVNFALESTGSPEILKQGV  114 (174)
T ss_dssp             TT----SCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHH
T ss_pred             CC----cCHHHHHHHHcCC-CCcEEEEcCCcHHHHHHHH
Confidence            87    7889999999865 9999999999998887764

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=4.4e-18  Score=143.57  Aligned_cols=110  Identities=24%  Similarity=0.262  Sum_probs=98.3

Q ss_pred             CCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEe
Q psy1413         291 VSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVL  367 (408)
Q Consensus       291 ~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~  367 (408)
                      +|+++||.++ +..|+|+++ +...+++++++||+|+ |++|+.++|+++.+|++ +++++++++|++.++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~-vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK-ILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcc-cccccccccccccccccCcccccc
Confidence            5788888887 788899998 5678999999999998 99999999999999997 888888999999999999999999


Q ss_pred             cCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         368 IDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      +++    +++.+.+++.++++++|++|||+|+. .++.+
T Consensus        80 ~~~----~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~  113 (174)
T d1yb5a2          80 HRE----VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKD  113 (174)
T ss_dssp             TTS----TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHH
T ss_pred             ccc----ccHHHHhhhhhccCCceEEeecccHH-HHHHH
Confidence            988    88999999999999999999999964 45443

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.72  E-value=6.8e-18  Score=141.98  Aligned_cols=55  Identities=35%  Similarity=0.610  Sum_probs=47.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV   57 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~   57 (408)
                      |+++|||+||++.++.++  .....+|.++|||++|+|+++|++++++++||||++.
T Consensus        32 v~a~gic~sD~~~~~~~~--~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~   86 (171)
T d1rjwa1          32 IKACGVCHTDLHAAHGDW--PVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP   86 (171)
T ss_dssp             EEEEEECHHHHHHHHTCS--SSCCCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEEC
T ss_pred             EEEeeccccceeeeeccc--ccccccccccCCEEEEEEEEecccccCceeeeEEeec
Confidence            579999999999886543  2345789999999999999999999999999999744

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.72  E-value=1.2e-17  Score=140.44  Aligned_cols=115  Identities=57%  Similarity=0.877  Sum_probs=99.1

Q ss_pred             CCcccccccchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         291 VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       291 ~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      +|+++||++++++++++++++..++++++++|+|+|++|+.++|+++.+|++ |++++++++|++.++++|++.+++.+.
T Consensus         1 VS~e~Aal~ePla~a~~a~~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga~-vi~v~~~~~r~~~a~~~ga~~~~~~~~   79 (170)
T d1e3ja2           1 VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDP   79 (170)
T ss_dssp             SCHHHHHTHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTCSEEEECCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcccccchhhHhhHhhhccc-ccccchHHHHHHHHHHcCCcEEEeccc
Confidence            4788999998999999999999999999999998899999999999999996 999999999999999999999887654


Q ss_pred             C-CChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         371 N-HSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       371 ~-~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      . .+..+..+.+.+.. ++++|++|||+|++.++++++
T Consensus        80 ~~~~~~~~~~~~~~~~-g~g~D~vid~~g~~~~~~~a~  116 (170)
T d1e3ja2          80 AKEEESSIIERIRSAI-GDLPNVTIDCSGNEKCITIGI  116 (170)
T ss_dssp             TTSCHHHHHHHHHHHS-SSCCSEEEECSCCHHHHHHHH
T ss_pred             cccccchhhhhhhccc-ccCCceeeecCCChHHHHHHH
Confidence            2 23345555565544 679999999999999888764

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.72  E-value=7.5e-18  Score=141.68  Aligned_cols=113  Identities=30%  Similarity=0.434  Sum_probs=96.2

Q ss_pred             Ccccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413         292 SLEEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID  369 (408)
Q Consensus       292 ~~~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~  369 (408)
                      +++.+|++.| ..|+|+++ +...++++++++|+|+|++|++++|+++.+|+++|++++++++|++.++++|++.++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            4577889886 66678786 779999999999999999999999999999999999999999999999999999999975


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      ..   ++..+.+.+.+.++++|++|||+|++.+++.++
T Consensus        82 ~~---~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~  116 (174)
T d1e3ia2          82 EL---DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAV  116 (174)
T ss_dssp             GC---SSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHH
T ss_pred             cc---hhhhhhhHhhhhcCCCcEEEEecccchHHHHHH
Confidence            41   223444455556789999999999999988764

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.72  E-value=1.3e-17  Score=140.81  Aligned_cols=78  Identities=19%  Similarity=0.263  Sum_probs=58.3

Q ss_pred             ccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEE
Q psy1413         244 CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLI  322 (408)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv  322 (408)
                      |+.|..|..+.++.|.+...+|.. .+|+|+||+.++++.++++|++++.+.++... .+.++++.++.. ..++++|||
T Consensus        97 ~g~~~~~~~g~~~~~~~~~~~G~~-~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~~~~g-~~~G~~VLV  174 (175)
T d1llua1          97 CGCCEHCLTGWETLCESQQNTGYS-VNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQMRAG-QIEGRIVLE  174 (175)
T ss_dssp             CSSSHHHHTTCGGGCTTCEEBTTT-BCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHHHHTT-CCSSEEEEE
T ss_pred             CCccccccCCcccccccccccccc-cccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHHHHhC-CCCCCEEEe
Confidence            344666666777777777766653 67999999999999999999999987666444 666666666544 346999998


Q ss_pred             E
Q psy1413         323 T  323 (408)
Q Consensus       323 ~  323 (408)
                      +
T Consensus       175 l  175 (175)
T d1llua1         175 M  175 (175)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.72  E-value=1.1e-17  Score=141.08  Aligned_cols=113  Identities=22%  Similarity=0.339  Sum_probs=97.7

Q ss_pred             CCcccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEec
Q psy1413         291 VSLEEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLI  368 (408)
Q Consensus       291 ~~~~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~  368 (408)
                      .|++.|+++.| ..|+|+++ +...++++++++|+|+|++|++++|+++.+|+++|++++++++|++.++++||+++||+
T Consensus         2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~   81 (176)
T d1d1ta2           2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP   81 (176)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECc
Confidence            35788999995 56678887 66889999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         369 DRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                      ++.   ++..+.+.+.+.++++|++||++|+..++..+
T Consensus        82 ~~~---~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a  116 (176)
T d1d1ta2          82 KDS---TKPISEVLSEMTGNNVGYTFEVIGHLETMIDA  116 (176)
T ss_dssp             GGC---SSCHHHHHHHHHTSCCCEEEECSCCHHHHHHH
T ss_pred             ccc---chHHHHHHHHhccccceEEEEeCCchHHHHHH
Confidence            762   23345666777788999999999999877654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.71  E-value=1.3e-17  Score=141.03  Aligned_cols=113  Identities=27%  Similarity=0.414  Sum_probs=95.9

Q ss_pred             Ccccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413         292 SLEEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID  369 (408)
Q Consensus       292 ~~~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~  369 (408)
                      |+++||++.| ..|+|+++ ++..++++++++|+|+|++|++++|+++.+|+++|++++++++|++.++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            5678999986 55788887 668899999999999999999999999999999999999999999999999999999986


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +  +.++..+.+++.+ ++++|++||++|+..+++.++
T Consensus        82 ~--~~~~~~~~~~~~~-~~g~D~vid~~G~~~~~~~~~  116 (176)
T d2fzwa2          82 D--FSKPIQEVLIEMT-DGGVDYSFECIGNVKVMRAAL  116 (176)
T ss_dssp             G--CSSCHHHHHHHHT-TSCBSEEEECSCCHHHHHHHH
T ss_pred             c--hhhHHHHHHHHHc-CCCCcEeeecCCCHHHHHHHH
Confidence            5  2244555566555 569999999999988877653

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.71  E-value=2.1e-17  Score=140.39  Aligned_cols=113  Identities=30%  Similarity=0.421  Sum_probs=97.2

Q ss_pred             ccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCC
Q psy1413         294 EEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRN  371 (408)
Q Consensus       294 ~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~  371 (408)
                      +.+|++.| ..|+|+++ +...+++++++||+|+|++|+.++|+++.+|+++|++++++++|++.++++|+++++|+++ 
T Consensus         4 ~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-   82 (182)
T d1vj0a2           4 DVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE-   82 (182)
T ss_dssp             HHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT-
T ss_pred             HHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc-
Confidence            34555554 56889998 4568999999999999999999999999999988999999999999999999999999876 


Q ss_pred             CChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         372 HSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      .+..+..+.+++.+.++++|+||||+|++.+++.++
T Consensus        83 ~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~  118 (182)
T d1vj0a2          83 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGS  118 (182)
T ss_dssp             SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHH
T ss_pred             cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHH
Confidence            344566777888898899999999999988877653

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.71  E-value=2.1e-17  Score=138.77  Aligned_cols=113  Identities=23%  Similarity=0.301  Sum_probs=102.8

Q ss_pred             CCcccccccch-hhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEec
Q psy1413         291 VSLEEGALLEP-LSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLI  368 (408)
Q Consensus       291 ~~~~~aa~~~~-~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~  368 (408)
                      +++.+||++++ ..|+|+++++..++++++++|+|+ |++|+.++|+++.+|+.+|++++++++|++.++++|+++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~   80 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA   80 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeecc
Confidence            46678999885 566888899999999999999997 9999999999999999889999999999999999999999998


Q ss_pred             CCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         369 DRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      ++    ++..+.+++.+.++++|++|||+|++.+++.++
T Consensus        81 ~~----~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~  115 (170)
T d1jvba2          81 SM----QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYP  115 (170)
T ss_dssp             TT----SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGG
T ss_pred             CC----cCHHHHHHHHhhcccchhhhcccccchHHHhhh
Confidence            77    778888889998889999999999999888775

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.70  E-value=3.2e-17  Score=137.97  Aligned_cols=110  Identities=25%  Similarity=0.329  Sum_probs=92.1

Q ss_pred             ccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCC
Q psy1413         294 EEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRN  371 (408)
Q Consensus       294 ~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~  371 (408)
                      .+++++.| ..|+|+++ ++..++++++++|+|+|++|++++|+++++|+++|++++++++|++.++++|+++++|+++.
T Consensus         3 ~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~   82 (174)
T d1p0fa2           3 LESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY   82 (174)
T ss_dssp             GGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGC
T ss_pred             HHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCc
Confidence            45788885 66688886 67899999999999999999999999999999999999999999999999999999998651


Q ss_pred             CChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         372 HSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                         ++..+.+.+.+.++++|++||++|+..+++.+
T Consensus        83 ---d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~  114 (174)
T d1p0fa2          83 ---DKPIYEVICEKTNGGVDYAVECAGRIETMMNA  114 (174)
T ss_dssp             ---SSCHHHHHHHHTTSCBSEEEECSCCHHHHHHH
T ss_pred             ---hhHHHHHHHHhcCCCCcEEEEcCCCchHHHHH
Confidence               22233344444567999999999999887654

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.70  E-value=7.3e-18  Score=142.53  Aligned_cols=86  Identities=19%  Similarity=0.252  Sum_probs=65.8

Q ss_pred             cCceeecCCCcccccccccCCcc-ccccceeecccC-------CCCccceeEEeec-cceeeeCCCCCCcccccccchhh
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRY-NLCRQIFFCATP-------PDHGNLSRYYRHA-ADFCHKLPDHVSLEEGALLEPLS  303 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa~~~~~~  303 (408)
                      +|+|.+.+..+|++|.+|+.|.+ +.|.+..++|..       ..+|+|++|+.++ ++.++++|++++.++     +++
T Consensus        88 Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~-----pl~  162 (184)
T d1vj0a1          88 GDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL-----PLK  162 (184)
T ss_dssp             TCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEE-----EGG
T ss_pred             eeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHHH-----HHH
Confidence            45555555555777888888874 457777777653       3589999999986 578999999998653     356


Q ss_pred             hhhhhhhccCcCCCCEEEEE
Q psy1413         304 VGVHACRRAGVTLGSKVLIT  323 (408)
Q Consensus       304 ~~~~~~~~~~~~~~~~~lv~  323 (408)
                      ++++++++..+++++++||+
T Consensus       163 ~A~~a~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         163 EANKALELMESREALKVILY  182 (184)
T ss_dssp             GHHHHHHHHHHTSCSCEEEE
T ss_pred             HHHHHHHHhCCCcCCEEEEe
Confidence            77888888899999999997

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.69  E-value=2.2e-17  Score=140.51  Aligned_cols=107  Identities=22%  Similarity=0.311  Sum_probs=94.4

Q ss_pred             ccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         294 EEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       294 ~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      ++||.++ ++.|+|+++ +...+++++++||+|+ |++|+.++|+|+.+|++ ++++++++++++.++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~-vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGAR-IYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCE-EEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhcccccc-ceeeecccccccccccccccccccCCc
Confidence            4677777 778899998 6678999999999998 99999999999999998 777778899999999999999999988


Q ss_pred             CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413         371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG  406 (408)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~  406 (408)
                          +++.+.++++++++++|++|||+|++ +++.+
T Consensus        80 ----~~~~~~v~~~t~~~g~d~v~d~~g~~-~~~~~  110 (183)
T d1pqwa_          80 ----VDFADEILELTDGYGVDVVLNSLAGE-AIQRG  110 (183)
T ss_dssp             ----STHHHHHHHHTTTCCEEEEEECCCTH-HHHHH
T ss_pred             ----cCHHHHHHHHhCCCCEEEEEecccch-HHHHH
Confidence                88999999999999999999999974 44443

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.68  E-value=1.5e-18  Score=149.12  Aligned_cols=68  Identities=28%  Similarity=0.357  Sum_probs=55.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcceecc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRR   72 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~p   72 (408)
                      |.++|||+||+|++. |.   .+..+|+++|||++|+|+++|++|+++|+||||++.+...+..+..|..+.
T Consensus        40 v~a~gICgsDlh~~~-G~---~~~~~P~i~GHE~~G~Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~  107 (198)
T d1p0fa1          40 ILASGICGSDSSVLK-EI---IPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSN  107 (198)
T ss_dssp             EEEEECCHHHHHHHT-TS---SCCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTT
T ss_pred             EEEEEEecccceeee-ec---cccccccccceeeeeeeeecCcccccCcCCCEEEEEeeccccccccccccc
Confidence            469999999999985 33   445789999999999999999999999999999887776665555555443

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.68  E-value=5.8e-17  Score=136.78  Aligned_cols=113  Identities=25%  Similarity=0.408  Sum_probs=97.6

Q ss_pred             Ccccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413         292 SLEEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID  369 (408)
Q Consensus       292 ~~~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~  369 (408)
                      |+++||++.| ..|+|+++ +...++++++++|+|+|++|++++++++.+|+.+|++++++++|++.++++||+++||+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            5678999995 56678887 678999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +.   ++..+.+++.+.++++|++||++|+..+++.++
T Consensus        82 ~~---~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~  116 (175)
T d1cdoa2          82 DH---SEPISQVLSKMTNGGVDFSLECVGNVGVMRNAL  116 (175)
T ss_dssp             GC---SSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHH
T ss_pred             Cc---chhHHHHHHhhccCCcceeeeecCCHHHHHHHH
Confidence            62   334556666777889999999999998877653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.67  E-value=6.5e-17  Score=138.45  Aligned_cols=102  Identities=34%  Similarity=0.491  Sum_probs=94.7

Q ss_pred             cccccchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCCh
Q psy1413         295 EGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSL  374 (408)
Q Consensus       295 ~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~  374 (408)
                      .+++..+++|+|+++.+..+++++++||+|+|++|++++|+++.+|+.+|++++++++|++.++++|+++++++.+    
T Consensus         4 ~~~l~d~~~ta~~a~~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~----   79 (195)
T d1kola2           4 LTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD----   79 (195)
T ss_dssp             HGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS----
T ss_pred             HHhcccHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC----
Confidence            3455568999999999999999999999999999999999999999999999999999999999999999999887    


Q ss_pred             HHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         375 EEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       375 ~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +++.+.+.++|++.++|++|||+|.+
T Consensus        80 ~~~~~~i~~~t~g~g~D~vid~vG~~  105 (195)
T d1kola2          80 TPLHEQIAALLGEPEVDCAVDAVGFE  105 (195)
T ss_dssp             SCHHHHHHHHHSSSCEEEEEECCCTT
T ss_pred             cCHHHHHHHHhCCCCcEEEEECcccc
Confidence            88999999999999999999999954

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.67  E-value=8.9e-17  Score=135.71  Aligned_cols=113  Identities=27%  Similarity=0.368  Sum_probs=95.6

Q ss_pred             Ccccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413         292 SLEEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID  369 (408)
Q Consensus       292 ~~~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~  369 (408)
                      |+++||+++| .+|+|+++ +...++++++++|+|+|++|++++|+++.+|+++|++++++++|++.++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            5778999996 47788887 678899999999999999999999999999999899999999999999999999999976


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +.   ++..+...+.+.++++|++||++|.+.++++++
T Consensus        82 ~~---~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~  116 (176)
T d2jhfa2          82 DY---KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL  116 (176)
T ss_dssp             GC---SSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHH
T ss_pred             Cc---hhHHHHHHHHHhcCCCCEEEecCCchhHHHHHH
Confidence            52   233334444455679999999999998887653

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.67  E-value=5.6e-17  Score=136.14  Aligned_cols=99  Identities=25%  Similarity=0.289  Sum_probs=87.1

Q ss_pred             CCcccccccc-hhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEec
Q psy1413         291 VSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLI  368 (408)
Q Consensus       291 ~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~  368 (408)
                      +++++||.++ +..|+|+++.+..+++++++||+|+ |++|++++|+++.+|++ |++++++++|.+.++++|+++++|+
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~-vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLR-VLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCE-EEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhhhhcccccc-cccccccccccccccccccceeeeh
Confidence            4678898887 6788999998899999999999998 99999999999999997 8888899999999999999999988


Q ss_pred             CCCCChHHHHHHHHHHhcCCCCceEEEcccc
Q psy1413         369 DRNHSLEEISTHIIELLQGEQPDKTIDCSGI  399 (408)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~  399 (408)
                      .+         ...+.+.++++|+||||+|.
T Consensus        80 ~~---------~~~~~~~~~g~D~v~d~~G~  101 (171)
T d1iz0a2          80 AE---------VPERAKAWGGLDLVLEVRGK  101 (171)
T ss_dssp             GG---------HHHHHHHTTSEEEEEECSCT
T ss_pred             hh---------hhhhhhccccccccccccch
Confidence            54         23455667899999999883

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.65  E-value=1.8e-16  Score=133.18  Aligned_cols=109  Identities=27%  Similarity=0.389  Sum_probs=94.1

Q ss_pred             ccccccc-hhhhhhhhhhcc--CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         294 EEGALLE-PLSVGVHACRRA--GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       294 ~~aa~~~-~~~~~~~~~~~~--~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      .++|+++ +..|+|+++.+.  .++++++++|+|+|++|+.++|+++.+|+++|++++++++|++.++++|+++++++++
T Consensus         7 ~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~   86 (172)
T d1h2ba2           7 VEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARR   86 (172)
T ss_dssp             HHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTS
T ss_pred             HHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcc
Confidence            4566666 677899999654  5799999999999999999999999999999999999999999999999999999876


Q ss_pred             CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                          ++.++ +.+.+.++++|++|||+|+..+++.++
T Consensus        87 ----~~~~~-~~~~~~~~g~d~vid~~g~~~~~~~a~  118 (172)
T d1h2ba2          87 ----DPVKQ-VMELTRGRGVNVAMDFVGSQATVDYTP  118 (172)
T ss_dssp             ----CHHHH-HHHHTTTCCEEEEEESSCCHHHHHHGG
T ss_pred             ----cHHHH-HHHhhCCCCceEEEEecCcchHHHHHH
Confidence                44444 456777889999999999999888775

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=1.9e-16  Score=133.34  Aligned_cols=55  Identities=25%  Similarity=0.363  Sum_probs=47.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP   58 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~   58 (408)
                      |+++|||+||++.+.+++   ....+|+++|||++|+|+++|++|+++++||||.+.+
T Consensus        32 v~a~gic~sDl~~~~g~~---~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGdrV~v~~   86 (179)
T d1uufa1          32 IAYCGVCHSDLHQVRSEW---AGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGC   86 (179)
T ss_dssp             EEEEECCHHHHHHHHCTT---SCCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECS
T ss_pred             EEEECCCCCcceeeeeee---ccccccccccccccccchhhccccccCCCCCEEEEcc
Confidence            469999999999996432   2357899999999999999999999999999997644

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.63  E-value=7.3e-17  Score=137.86  Aligned_cols=158  Identities=20%  Similarity=0.390  Sum_probs=126.4

Q ss_pred             ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413          73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV  152 (408)
Q Consensus        73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv  152 (408)
                      ..+.. +..++|.+.+.++++.+.++++++.++.++.    |....+++..+|+|+.|+|..+|+..+.++.        
T Consensus        14 ~~l~l-~~v~~P~p~~geVlVkv~a~gic~sD~~~~~----G~~~~~~P~i~GHE~~G~V~~vG~~v~~~~v--------   80 (194)
T d1f8fa1          14 ADFEL-QALKIRQPQGDEVLVKVVATGMCHTDLIVRD----QKYPVPLPAVLGHEGSGIIEAIGPNVTELQV--------   80 (194)
T ss_dssp             CCCEE-EEEEECCCCTTEEEEEEEEEECCHHHHHHHT----TSSCCCSSBCCCCEEEEEEEEECTTCCSCCT--------
T ss_pred             CCcEE-EEeeCCCCCCCEEEEEEEEEEecCchHhhhh----hcccccCCcccccceEEEeeecCccceeEcc--------
Confidence            35777 7788899999999999999999998876643    2334578889999999999999976555554        


Q ss_pred             EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413         153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH  232 (408)
Q Consensus       153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~  232 (408)
                                                                                                      
T Consensus        81 --------------------------------------------------------------------------------   80 (194)
T d1f8fa1          81 --------------------------------------------------------------------------------   80 (194)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCceeecCCCcccccccccCCccccccceeecccC----------------------CCCccceeEEeeccceeeeCCCC
Q psy1413         233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATP----------------------PDHGNLSRYYRHAADFCHKLPDH  290 (408)
Q Consensus       233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~g~~~~~~~~~~~~~~~~p~~  290 (408)
                      +|+|+.. ..+|++|.+|.+|++++|++.......                      ...|+|++|.++++..++++|++
T Consensus        81 GDrVv~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~  159 (194)
T d1f8fa1          81 GDHVVLS-YGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD  159 (194)
T ss_dssp             TCEEEEC-CCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred             Cceeeee-cccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC
Confidence            9998554 558999999999999999874222110                      01378999999999999999999


Q ss_pred             CCcccccccchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEE
Q psy1413         291 VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT  347 (408)
Q Consensus       291 ~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~  347 (408)
                      ++++++                       +++.|+|++|+.++|+++.+|+++|+++
T Consensus       160 i~~~~~-----------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         160 FPFDQL-----------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             CCGGGG-----------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCcccE-----------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            886532                       4556669999999999999999988875

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.63  E-value=9.7e-17  Score=134.49  Aligned_cols=157  Identities=25%  Similarity=0.408  Sum_probs=128.7

Q ss_pred             eeecccccCCCC-CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          75 LRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        75 ~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      +.+ +..++|.. .+.++++.+.++++++.++..+-...-.....+++..+|+|+.|+|..+|...+.++.         
T Consensus        12 l~i-~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~~---------   81 (171)
T d1h2ba1          12 LRI-EDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEK---------   81 (171)
T ss_dssp             CEE-ECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCCT---------
T ss_pred             CEE-EEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCCC---------
Confidence            667 67788865 5778999999999998887554211112223456778999999999999976444444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        82 -------------------------------------------------------------------------------G   82 (171)
T d1h2ba1          82 -------------------------------------------------------------------------------G   82 (171)
T ss_dssp             -------------------------------------------------------------------------------T
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           9


Q ss_pred             CceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCccccccc-chhhhhhhhhhcc
Q psy1413         234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALL-EPLSVGVHACRRA  312 (408)
Q Consensus       234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~-~~~~~~~~~~~~~  312 (408)
                      |+|++.+..+|++|..|..|.+++|.+..+.|.. .+|+|++|+.++++.++++|++++++.++.+ .+++|+++++++.
T Consensus        83 drV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al~~~  161 (171)
T d1h2ba1          83 DPVILHPAVTDGTCLACRAGEDMHCENLEFPGLN-IDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEKG  161 (171)
T ss_dssp             CEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTT-BCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHHHTT
T ss_pred             CEEEEcCccCCCCcccccccccccccccccceee-cccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHHHhc
Confidence            9999999999999999999999999999888875 6899999999999999999999999866644 5888999999887


Q ss_pred             CcCCCCEEEE
Q psy1413         313 GVTLGSKVLI  322 (408)
Q Consensus       313 ~~~~~~~~lv  322 (408)
                      .+ .+++|||
T Consensus       162 ~~-~G~~VlI  170 (171)
T d1h2ba1         162 EV-LGRAVLI  170 (171)
T ss_dssp             CC-SSEEEEE
T ss_pred             CC-CCCEEEe
Confidence            77 8999987

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.63  E-value=4e-16  Score=132.35  Aligned_cols=96  Identities=24%  Similarity=0.217  Sum_probs=86.6

Q ss_pred             hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHH
Q psy1413         301 PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIS  378 (408)
Q Consensus       301 ~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~  378 (408)
                      +..|+|+++ +...+++++++||+|+ |++|++++|+++.+|++ ||.++++++|.++++++|+++++++++    ++..
T Consensus        13 ~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~-vi~~~~~~~~~~~~~~~Ga~~vi~~~~----~~~~   87 (182)
T d1v3va2          13 PGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCK-VVGAAGSDEKIAYLKQIGFDAAFNYKT----VNSL   87 (182)
T ss_dssp             HHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHTTCSEEEETTS----CSCH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCE-EEEeCCCHHHHHHHHhhhhhhhccccc----ccHH
Confidence            566899998 5778999999999999 99999999999999997 999999999999999999999999988    6777


Q ss_pred             HHHHHHhcCCCCceEEEcccchh
Q psy1413         379 THIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       379 ~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      +.+.+.+.++++|+||||+|++.
T Consensus        88 ~~~~~~~~~~Gvd~v~D~vG~~~  110 (182)
T d1v3va2          88 EEALKKASPDGYDCYFDNVGGEF  110 (182)
T ss_dssp             HHHHHHHCTTCEEEEEESSCHHH
T ss_pred             HHHHHHhhcCCCceeEEecCchh
Confidence            77788888899999999999653

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.63  E-value=4.9e-16  Score=129.78  Aligned_cols=110  Identities=25%  Similarity=0.248  Sum_probs=95.4

Q ss_pred             CCcccccccch-hhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413         291 VSLEEGALLEP-LSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID  369 (408)
Q Consensus       291 ~~~~~aa~~~~-~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~  369 (408)
                      ++++++|+++| ..|+|+++++..++++++++|+|+|++|++++|+++.+|++ |++++++++|++.++++|+++++|++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~~-Vi~~~~~~~~~~~a~~~Ga~~~i~~~   79 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMGLH-VAAIDIDDAKLELARKLGASLTVNAR   79 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeeccccHHHHHHHHHHcCCc-cceecchhhHHHhhhccCcccccccc
Confidence            46788998884 56788999889999999999999999999999999999975 99999999999999999999999988


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +    ++..+.+++.+  .+.|.+++++++..++++++
T Consensus        80 ~----~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~  111 (166)
T d1llua2          80 Q----EDPVEAIQRDI--GGAHGVLVTAVSNSAFGQAI  111 (166)
T ss_dssp             T----SCHHHHHHHHH--SSEEEEEECCSCHHHHHHHH
T ss_pred             c----hhHHHHHHHhh--cCCcccccccccchHHHHHH
Confidence            7    66666777665  35788888888888888765

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=1.3e-15  Score=127.30  Aligned_cols=107  Identities=23%  Similarity=0.159  Sum_probs=89.1

Q ss_pred             CCcccccccchh-hhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413         291 VSLEEGALLEPL-SVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID  369 (408)
Q Consensus       291 ~~~~~aa~~~~~-~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~  369 (408)
                      .+++.+|++.|+ .|+|+++++..++++++++|+|+|++|+.++|+++.+|++ +++++++++|++.++++|+++++|+.
T Consensus         4 ~~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga~-~i~~~~~~~~~~~a~~lGad~~i~~~   82 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAH-VVAFTTSEAKREAAKALGADEVVNSR   82 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHTCSEEEETT
T ss_pred             ccHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEeccchHHHHHHHHhhccccc-chhhccchhHHHHHhccCCcEEEECc
Confidence            445667777764 4678888999999999999999999999999999999998 56788899999999999999999987


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +    ++..     .+..+++|.+|||+|++.+++.++
T Consensus        83 ~----~~~~-----~~~~~~~D~vid~~g~~~~~~~~~  111 (168)
T d1uufa2          83 N----ADEM-----AAHLKSFDFILNTVAAPHNLDDFT  111 (168)
T ss_dssp             C----HHHH-----HTTTTCEEEEEECCSSCCCHHHHH
T ss_pred             h----hhHH-----HHhcCCCceeeeeeecchhHHHHH
Confidence            6    3322     233578999999999988877664

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.60  E-value=5.4e-16  Score=129.93  Aligned_cols=105  Identities=16%  Similarity=0.171  Sum_probs=84.1

Q ss_pred             CCcccccccc-hhhhhhhhh----hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCe
Q psy1413         291 VSLEEGALLE-PLSVGVHAC----RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADA  364 (408)
Q Consensus       291 ~~~~~aa~~~-~~~~~~~~~----~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~  364 (408)
                      +|+++||.++ +..|||+++    .....++++++||+|+ |++|.+++|+++.+|++ |++++++++|.+.++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~-Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYT-VEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCc-eEEecCchHHHHHHHhcccce
Confidence            4788999888 556788665    3467888999999998 99999999999999998 888999999999999999999


Q ss_pred             EEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         365 TVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       365 ~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      ++|+++     ...+. ...++++++|+|||++|+...
T Consensus        80 vi~~~~-----~~~~~-~~~~~~~gvD~vid~vgg~~~  111 (176)
T d1xa0a2          80 VLARED-----VMAER-IRPLDKQRWAAAVDPVGGRTL  111 (176)
T ss_dssp             EEECC---------------CCSCCEEEEEECSTTTTH
T ss_pred             eeecch-----hHHHH-HHHhhccCcCEEEEcCCchhH
Confidence            999854     22333 345667899999999997743

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.60  E-value=1.7e-17  Score=142.43  Aligned_cols=56  Identities=27%  Similarity=0.477  Sum_probs=49.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~   60 (408)
                      |+++|||+||+++++ |   .++.++|+++|||++|+|+++|++|++|++||||++.+..
T Consensus        39 v~a~giC~sDl~~~~-G---~~~~~~P~v~GHE~~G~Vv~vG~~V~~~~vGdrV~v~~~~   94 (201)
T d1kola1          39 VVSTNICGSDQHMVR-G---RTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNV   94 (201)
T ss_dssp             EEEEECCHHHHHHHT-T---CSCCCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEE
T ss_pred             EEEEEEcchhhhhhc-C---CcccccceeccceeeeeeeccccccccccccceeEEeeee
Confidence            468999999999985 3   3556889999999999999999999999999999876643

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.59  E-value=9.3e-17  Score=134.95  Aligned_cols=117  Identities=19%  Similarity=0.176  Sum_probs=77.1

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCccee----------
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILR----------   70 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~----------   70 (408)
                      |+++|||+||++.+.+++   ...++|+++|||++|+|+++|++|++||+||||++.+...+..+..|..          
T Consensus        31 v~a~gic~sD~~~~~~~~---~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~  107 (177)
T d1jqba1          31 PLAVSPCTSDIHTVFEGA---LGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGML  107 (177)
T ss_dssp             EEEECCCHHHHHHHHHCT---TCCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTT
T ss_pred             EEEEecCCCcccccccCC---CCCCCCccCcceeeEEeeecccccceecCCCcEEEeeeeccccccchhhhhhccccccc
Confidence            468999999999886654   3457899999999999999999999999999999876543222111110          


Q ss_pred             ------------ccceeeecc----cccCCCCCCcceEEEEeeeee--cCCeEEEEccCccccccccc
Q psy1413          71 ------------RRFSLRFRE----QKPIEDPDDHEVLLEMHCVGI--CGSDVHYLTHGQIGDFRLSD  120 (408)
Q Consensus        71 ------------~p~~~~~~~----~~~lp~~~~~~~~~~~~~~~~--~g~~vlv~g~G~vG~~~i~~  120 (408)
                                  ..+++..+.    ..++|+..+.+.++.....++  .++++++.|+|++|+.+.++
T Consensus       108 ~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~~~~~~~~~vlv~g~gp~gl~aa~v  175 (177)
T d1jqba1         108 AGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIKAVV  175 (177)
T ss_dssp             TTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEESGGGHHHHHHHHHHCCTTCSEEEE
T ss_pred             ccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHHHHHHhcCceEEECCCHHHhheeee
Confidence                        012222221    234555544443333333322  35678888999998877654

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.59  E-value=3.6e-17  Score=138.31  Aligned_cols=59  Identities=59%  Similarity=1.021  Sum_probs=52.5

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~   59 (408)
                      |+++|||+||++.+++++.+.+..++|+++|||++|+|+++|++|++||+||||++.+.
T Consensus        32 v~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~GdrV~~~~~   90 (178)
T d1e3ja1          32 MAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPG   90 (178)
T ss_dssp             EEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCE
T ss_pred             EEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCCCCEEEECcc
Confidence            46899999999999777666666788999999999999999999999999999987653

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.59  E-value=2.8e-16  Score=134.17  Aligned_cols=55  Identities=25%  Similarity=0.547  Sum_probs=47.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE   59 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~   59 (408)
                      |+++|||+||++++. |   .++.++|++||||++|+|+++|++|++|++||||+..+.
T Consensus        35 v~a~gic~sD~~~~~-G---~~~~~~P~i~GHE~~G~V~~vG~~v~~~~vGDrVv~~~~   89 (194)
T d1f8fa1          35 VVATGMCHTDLIVRD-Q---KYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYG   89 (194)
T ss_dssp             EEEEECCHHHHHHHT-T---SSCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECCC
T ss_pred             EEEEEecCchHhhhh-h---cccccCCcccccceEEEeeecCccceeEccCceeeeecc
Confidence            469999999999884 4   345678999999999999999999999999999976543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.58  E-value=1.5e-15  Score=126.89  Aligned_cols=101  Identities=24%  Similarity=0.206  Sum_probs=84.4

Q ss_pred             Ccccccccch-hhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         292 SLEEGALLEP-LSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       292 ~~~~aa~~~~-~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      |.+.||++.| ..|+|+++++..++++++++|+|+|++|++++|+++.+|++ |++++++++|++.++++|+++++++.+
T Consensus         2 p~e~AApl~cag~Ta~~al~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~~-vi~~~~~~~k~~~a~~lGa~~~i~~~~   80 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAE-TYVISRSSRKREDAMKMGADHYIATLE   80 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTCE-EEEEESSSTTHHHHHHHTCSEEEEGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEECCCCcchhHHHHhhhcccc-ccccccchhHHHHhhccCCcEEeeccc
Confidence            4566788875 45688899889999999999999999999999999999997 888999999999999999999999865


Q ss_pred             CCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         371 NHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      .   .++.   +..  .+++|.++||+|+..
T Consensus        81 ~---~~~~---~~~--~~~~d~vi~~~~~~~  103 (168)
T d1piwa2          81 E---GDWG---EKY--FDTFDLIVVCASSLT  103 (168)
T ss_dssp             T---SCHH---HHS--CSCEEEEEECCSCST
T ss_pred             h---HHHH---Hhh--hcccceEEEEecCCc
Confidence            2   2222   222  358999999988765

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.57  E-value=1.7e-15  Score=130.03  Aligned_cols=72  Identities=26%  Similarity=0.343  Sum_probs=59.2

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcceeccceee
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFSLR   76 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~p~~~~   76 (408)
                      |.++|||+||+|.+. |   .++.++|+++|||++|+|+++|++|+++++||||++.+...+..+..+..+...+.
T Consensus        40 V~a~giC~sDl~~~~-G---~~~~~~P~i~GHE~~G~Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C  111 (198)
T d2jhfa1          40 MVATGICRSDDHVVS-G---TLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFC  111 (198)
T ss_dssp             EEEEECCHHHHHHHH-T---SSCCCSSBCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCC
T ss_pred             EEEEecccccceeec-C---CcccccceecccceeEEEEecCccccCcCCCCEEEEeeeecccccccccCCcccee
Confidence            569999999999995 3   35567899999999999999999999999999999888776666655555544443

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.57  E-value=3.2e-15  Score=124.91  Aligned_cols=110  Identities=28%  Similarity=0.319  Sum_probs=96.3

Q ss_pred             CCcccccccc-hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413         291 VSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID  369 (408)
Q Consensus       291 ~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~  369 (408)
                      +|+++||+++ ...|+|+++++..+++++++||+|+|++|++++|+++.+|++ |++++++++|++.++++|++.++++.
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~~-v~~~~~~~~r~~~~k~~Ga~~~~~~~   79 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLN-VVAVDIGDEKLELAKELGADLVVNPL   79 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecccchhhhhHHHhcCCCe-EeccCCCHHHhhhhhhcCcceecccc
Confidence            5788999888 456688899999999999999998899999999999999996 89999999999999999999999998


Q ss_pred             CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413         370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM  407 (408)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~  407 (408)
                      +    ++..+.+++.+.  +.|.+++++++..+++.++
T Consensus        80 ~----~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~a~  111 (168)
T d1rjwa2          80 K----EDAAKFMKEKVG--GVHAAVVTAVSKPAFQSAY  111 (168)
T ss_dssp             T----SCHHHHHHHHHS--SEEEEEESSCCHHHHHHHH
T ss_pred             c----chhhhhcccccC--CCceEEeecCCHHHHHHHH
Confidence            8    778888888884  5667777888888877664

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.57  E-value=2.8e-15  Score=127.53  Aligned_cols=106  Identities=24%  Similarity=0.249  Sum_probs=88.3

Q ss_pred             CCcccccccchhhhhhhhh-hccCcCCC--CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHH-HHHHcCCCeE
Q psy1413         291 VSLEEGALLEPLSVGVHAC-RRAGVTLG--SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLK-TAKEMGADAT  365 (408)
Q Consensus       291 ~~~~~aa~~~~~~~~~~~~-~~~~~~~~--~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~~~~~ga~~~  365 (408)
                      +|+.+.++-.+..|+|+++ ....++++  ++|||+|+ |++|++++|+|+.+|++.|+.+++++++.. ..+++|++++
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v   81 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA   81 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence            5566655444778999998 55677776  89999998 999999999999999997887777766655 4578999999


Q ss_pred             EecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413         366 VLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES  401 (408)
Q Consensus       366 i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~  401 (408)
                      +|+++    +++.+.+++++ ++++|++||++|++.
T Consensus        82 i~~~~----~~~~~~~~~~~-~~GvDvv~D~vGg~~  112 (187)
T d1vj1a2          82 VNYKT----GNVAEQLREAC-PGGVDVYFDNVGGDI  112 (187)
T ss_dssp             EETTS----SCHHHHHHHHC-TTCEEEEEESSCHHH
T ss_pred             eeccc----hhHHHHHHHHh-ccCceEEEecCCchh
Confidence            99988    88999999998 479999999999754

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.56  E-value=3.1e-18  Score=147.18  Aligned_cols=179  Identities=23%  Similarity=0.296  Sum_probs=136.4

Q ss_pred             CcceeccceeeecccccCCCC-------CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCch
Q psy1413          66 SPILRRRFSLRFREQKPIEDP-------DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK  138 (408)
Q Consensus        66 ~~~~~~p~~~~~~~~~~lp~~-------~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~  138 (408)
                      ..++..|..+.+ ++.+.|+.       .+.++++.+.++++++.++..+-    |....+++..+|+|+.|+|+.+|..
T Consensus         4 A~v~~~~~~le~-~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~----G~~~~~~P~v~GHE~~G~Vv~vG~~   78 (201)
T d1kola1           4 GVVYLGSGKVEV-QKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVR----GRTTAQVGLVLGHEITGEVIEKGRD   78 (201)
T ss_dssp             EEEEEETTEEEE-EEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHT----TCSCCCTTCBCCCCEEEEEEEECTT
T ss_pred             EEEEeCCCceEE-EEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhc----CCcccccceeccceeeeeeeccccc
Confidence            456777888877 66666643       45888999999999988876643    2334567889999999999999976


Q ss_pred             HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHH
Q psy1413         139 VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFET  218 (408)
Q Consensus       139 ~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~  218 (408)
                      .+.++.                                                                          
T Consensus        79 V~~~~v--------------------------------------------------------------------------   84 (201)
T d1kola1          79 VENLQI--------------------------------------------------------------------------   84 (201)
T ss_dssp             CCSCCT--------------------------------------------------------------------------
T ss_pred             cccccc--------------------------------------------------------------------------
Confidence            555555                                                                          


Q ss_pred             HHcCCCCceEEEEEcCceeecCCCcccccccccCCcccccccee------ecc---cCCCCccceeEEeecc--ceeeeC
Q psy1413         219 AKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIF------FCA---TPPDHGNLSRYYRHAA--DFCHKL  287 (408)
Q Consensus       219 ~~~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~g~~~~~~~~~~--~~~~~~  287 (408)
                                    +|+|++.+..+|++|..|++++++.|....      .++   ....+|+|+||++++.  ..++++
T Consensus        85 --------------GdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~i  150 (201)
T d1kola1          85 --------------GDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKL  150 (201)
T ss_dssp             --------------TCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEEC
T ss_pred             --------------cceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEEC
Confidence                          999999999999999999999999886531      111   1245799999999974  369999


Q ss_pred             CCCCCc-ccccccchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCC
Q psy1413         288 PDHVSL-EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA  341 (408)
Q Consensus       288 p~~~~~-~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga  341 (408)
                      |++.+. +.+++..+++++++++.....+.+    ++|+|++|++++|++|++||
T Consensus       151 Pd~~~~~~~~~~~~~~~~~~~a~~~~~~~~g----~~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         151 PDRDKAMEKINIAEVVGVQVISLDDAPRGYG----EFDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             SCHHHHHHTCCHHHHHTEEEECGGGHHHHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhCCCCCe----EEeeCHHHHHHHHHHHHcCC
Confidence            997554 444455578888888866544433    35779999999999999986

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.52  E-value=2.2e-14  Score=116.89  Aligned_cols=52  Identities=38%  Similarity=0.432  Sum_probs=44.9

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEE
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTR   55 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~   55 (408)
                      |+++|||++|+++++ |.+  ....+|.++|||++|+|+++|++|++||+||||+
T Consensus        34 v~a~~in~~D~~~~~-G~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~   85 (147)
T d1qora1          34 NKAIGINFIDTYIRS-GLY--PPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVV   85 (147)
T ss_dssp             EEEEECCHHHHHHHH-TSS--CCSSSSBCCCSCEEEEEEEECTTCCSCCTTCEEE
T ss_pred             EEEecccceeeeeec-CCC--CCCcceeeeccccccceeeeeeecccccccceee
Confidence            479999999999985 432  2347899999999999999999999999999983

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.51  E-value=3.5e-15  Score=128.06  Aligned_cols=164  Identities=23%  Similarity=0.348  Sum_probs=129.1

Q ss_pred             ceeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhcc
Q psy1413          68 ILRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATR  146 (408)
Q Consensus        68 ~~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~  146 (408)
                      ++..+. .+.+ ++.++|.+.+.++++.+.++++++.++.......   ........+|.|+.|++..+|.....++.  
T Consensus        13 v~~~~~~pl~i-~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~---~~~~~p~i~GhE~~G~v~~vG~~v~~~~~--   86 (199)
T d1cdoa1          13 VAWEANKPLVI-EEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGK---HKDGFPVVLGHEGAGIVESVGPGVTEFQP--   86 (199)
T ss_dssp             EBCSTTSCCEE-EEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTC---CTTSCSEECCCCEEEEEEEECTTCCSCCT--
T ss_pred             EEecCCCCcEE-EEEECCCCCCCEEEEEEEEEEEecchhhhhhhcc---cccccccccccccceEEEEEcCCCceecC--
Confidence            444444 4777 7788999999999999999999998866543211   22346677899999999999976444444  


Q ss_pred             CCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCc
Q psy1413         147 PGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNA  226 (408)
Q Consensus       147 ~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~  226 (408)
                                                                                                      
T Consensus        87 --------------------------------------------------------------------------------   86 (199)
T d1cdoa1          87 --------------------------------------------------------------------------------   86 (199)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEEEEcCceeecCCCcccccccccCCccccccceeecccCC--------------------CCccceeEEeeccceeee
Q psy1413         227 IKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPP--------------------DHGNLSRYYRHAADFCHK  286 (408)
Q Consensus       227 ~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~~~~~~~~~~~~~  286 (408)
                            +|+|++.+..+|+.|..|..+.+++|.+........                    ..|+|+||.+++++.+++
T Consensus        87 ------GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~  160 (199)
T d1cdoa1          87 ------GEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAK  160 (199)
T ss_dssp             ------TCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred             ------CCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEE
Confidence                  999999999999999999999999998754332211                    149999999999999999


Q ss_pred             CCCCCCcccccccc-hhhhhhhhhhc-cCcCCCCEEEEE
Q psy1413         287 LPDHVSLEEGALLE-PLSVGVHACRR-AGVTLGSKVLIT  323 (408)
Q Consensus       287 ~p~~~~~~~aa~~~-~~~~~~~~~~~-~~~~~~~~~lv~  323 (408)
                      +|+++++++++.+. ++.|++.++.. ...+.++++||+
T Consensus       161 iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         161 IDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             CCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999998887666 78888998844 456789999884

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=5e-16  Score=131.86  Aligned_cols=60  Identities=57%  Similarity=0.988  Sum_probs=52.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~   60 (408)
                      |+++|||+||++.+..++.+.++.++|.++|||++|+|+++|++|++|++||||++.+..
T Consensus        38 v~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~   97 (185)
T d1pl8a1          38 MHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGA   97 (185)
T ss_dssp             EEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCCTTCEEEECSEE
T ss_pred             EEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeeecccccceeccee
Confidence            469999999999997665555667889999999999999999999999999999987643

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.49  E-value=6.6e-16  Score=129.32  Aligned_cols=60  Identities=22%  Similarity=0.384  Sum_probs=49.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF   60 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~   60 (408)
                      |+++|||++|++.+++.+......++|.++|||++|+|+++|++|+++++||||++.+..
T Consensus        32 v~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~   91 (171)
T d1h2ba1          32 IAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAV   91 (171)
T ss_dssp             EEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCB
T ss_pred             EEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCCCCCEEEEcCcc
Confidence            468999999999985433222234679999999999999999999999999999987644

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.48  E-value=1.6e-14  Score=123.06  Aligned_cols=110  Identities=19%  Similarity=0.289  Sum_probs=85.3

Q ss_pred             CCcccccccc-hhhhhhhhh-hccCcCCCCEEEEE-ec-chhHHHHHHHHHHhCCCeEEEEecCh----hhHHHHHHcCC
Q psy1413         291 VSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLIT-GA-GPIGLVTLLTARALGASRVVITDILE----HKLKTAKEMGA  362 (408)
Q Consensus       291 ~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~-G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~----~~~~~~~~~ga  362 (408)
                      +|+++||.++ ...|+|+++ +...++++++++|+ |+ |++|++++|+|+.+|++ +|++.++.    ++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~-vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFN-SISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCE-EEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCe-EEEEEecccccchHHhhhhhccc
Confidence            4778999888 778899998 55789999988886 77 99999999999999998 66665543    34567789999


Q ss_pred             CeEEecCCCCChHHHHHHHHHHh--cCCCCceEEEcccchhh
Q psy1413         363 DATVLIDRNHSLEEISTHIIELL--QGEQPDKTIDCSGIEST  402 (408)
Q Consensus       363 ~~~i~~~~~~~~~~~~~~~~~~~--~~~~~d~i~d~~g~~~~  402 (408)
                      ++++++++. +..++.+.+++++  .++++|++|||+|++..
T Consensus        80 d~vi~~~~~-~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~  120 (189)
T d1gu7a2          80 TQVITEDQN-NSREFGPTIKEWIKQSGGEAKLALNCVGGKSS  120 (189)
T ss_dssp             SEEEEHHHH-HCGGGHHHHHHHHHHHTCCEEEEEESSCHHHH
T ss_pred             cEEEecccc-chhHHHHHHHHHHhhccCCceEEEECCCcchh
Confidence            999998541 1134555566654  36789999999997654

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.8e-15  Score=122.62  Aligned_cols=82  Identities=13%  Similarity=0.187  Sum_probs=62.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCCcceeccc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLSPILRRRF   73 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~~~~~~p~   73 (408)
                      |+++|||++|++.++ |.. .....+|.++|||++|+|+++|++|++|++||||+..+       ++...+.+.++..|+
T Consensus        37 v~a~~i~~~D~~~~~-g~~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~iP~  114 (150)
T d1yb5a1          37 VHACGVNPVETYIRS-GTY-SRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPE  114 (150)
T ss_dssp             EEEEECCHHHHHHHH-TCS-SCCCCSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCT
T ss_pred             EEEecCcccchhhhc-CCc-CccccccccCccceeeeeEeecceeeccccCccccccccccccccccccccccccccccC
Confidence            469999999999884 432 23457899999999999999999999999999998654       333455556666777


Q ss_pred             eeeecccccCC
Q psy1413          74 SLRFREQKPIE   84 (408)
Q Consensus        74 ~~~~~~~~~lp   84 (408)
                      ++++++++.++
T Consensus       115 ~ls~~~Aa~~~  125 (150)
T d1yb5a1         115 KLKPVIGSQYP  125 (150)
T ss_dssp             TCCCCEEEEEE
T ss_pred             CCCHHHHHHhh
Confidence            77764444333

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.46  E-value=8.4e-15  Score=126.06  Aligned_cols=164  Identities=21%  Similarity=0.317  Sum_probs=126.4

Q ss_pred             Ccceeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhh
Q psy1413          66 SPILRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA  144 (408)
Q Consensus        66 ~~~~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~  144 (408)
                      ..++..+. .+.+ ++.++|.+.+.++++.+.++++++.++.+.-    |.....++..+|+|+.|+|..+|...+.++.
T Consensus        11 AaV~~~~g~pl~i-~evp~P~p~~geVlVkv~a~gic~sD~~~~~----G~~~~~~P~v~GHE~~G~V~~vG~~V~~~~~   85 (202)
T d1e3ia1          11 AAIAWKTGSPLCI-EEIEVSPPKACEVRIQVIATCVCPTDINATD----PKKKALFPVVLGHECAGIVESVGPGVTNFKP   85 (202)
T ss_dssp             EEEBCSTTSCCEE-EEEEECCCCTTEEEEEEEEEECCHHHHHTTC----TTSCCCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             EEEEccCCCCCEE-EEEECCCCCCCEEEEEEEEEEEeccccceee----eecccccccccccccceEEeeecCCceeccC
Confidence            34555554 3777 7788999999999999999999998876542    2233456788999999999999976544444


Q ss_pred             ccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         145 TRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       145 l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                                                                                                      
T Consensus        86 --------------------------------------------------------------------------------   85 (202)
T d1e3ia1          86 --------------------------------------------------------------------------------   85 (202)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CceEEEEEcCceeecCCCcccccccccCCccccccceeecccCC------------------------CCccceeEEeec
Q psy1413         225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPP------------------------DHGNLSRYYRHA  280 (408)
Q Consensus       225 ~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~g~~~~~~~~~  280 (408)
                              +|+|+..+...|+.|..|..|.+++|.+.+.++...                        .+|+|+||++++
T Consensus        86 --------GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~  157 (202)
T d1e3ia1          86 --------GDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVS  157 (202)
T ss_dssp             --------TCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEE
T ss_pred             --------CCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEe
Confidence                    999999999999999999999999998766554321                        248999999999


Q ss_pred             cceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEe
Q psy1413         281 ADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITG  324 (408)
Q Consensus       281 ~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G  324 (408)
                      +..++++|++++++.+++.. .+.+.+.++..  ++++++|.|+.
T Consensus       158 ~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~--~k~G~~V~vi~  200 (202)
T d1e3ia1         158 EANLARVDDEFDLDLLVTHALPFESINDAIDL--MKEGKSIRTIL  200 (202)
T ss_dssp             GGGEEECCTTSCGGGGEEEEEEGGGHHHHHHH--HHTTCCSEEEE
T ss_pred             hhhEEECCCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEEE
Confidence            99999999999988766655 33444445433  46788877764

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.42  E-value=9.4e-16  Score=128.71  Aligned_cols=165  Identities=22%  Similarity=0.254  Sum_probs=124.3

Q ss_pred             cceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhcc
Q psy1413          67 PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATR  146 (408)
Q Consensus        67 ~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~  146 (408)
                      .++..|..+.+ ++.+.|.+.+.++++.+.++++++.++..+..+   ....+....+|+|+.|+|+.+|+..+.++.  
T Consensus         4 ~v~~~~~~l~i-~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~---~~~~~~P~i~GhE~~G~V~~vG~~v~~~~v--   77 (177)
T d1jqba1           4 FAMLGINKLGW-IEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEG---ALGDRKNMILGHEAVGEVVEVGSEVKDFKP--   77 (177)
T ss_dssp             EEEEETTEEEE-EECCCCCCCTTCEEEEEEEECCCHHHHHHHHHC---TTCCCSSEECCCCEEEEEEEECTTCCSCCT--
T ss_pred             EEEEeCCCeEE-EEeeCCCCCCCEEEEEEEEEecCCCcccccccC---CCCCCCCccCcceeeEEeeecccccceecC--
Confidence            45677888888 777999999999999999999999886443222   233466778999999999999986554544  


Q ss_pred             CCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCc
Q psy1413         147 PGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNA  226 (408)
Q Consensus       147 ~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~  226 (408)
                                                                                                      
T Consensus        78 --------------------------------------------------------------------------------   77 (177)
T d1jqba1          78 --------------------------------------------------------------------------------   77 (177)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eEEEEEcCceeecCCCcccccccccCCccccccceee--cccCCCCccceeEEeecc--ceeeeCCCCCCcccccccchh
Q psy1413         227 IKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFF--CATPPDHGNLSRYYRHAA--DFCHKLPDHVSLEEGALLEPL  302 (408)
Q Consensus       227 ~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~--~~~~~~p~~~~~~~aa~~~~~  302 (408)
                            +|+|++.+..+|++|..|..+.++.|.+...  ......+|+|+||+.++.  .+++++|+++++++++...  
T Consensus        78 ------GdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~--  149 (177)
T d1jqba1          78 ------GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHV--  149 (177)
T ss_dssp             ------TCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEE--
T ss_pred             ------CCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHH--
Confidence                  9999999999999999999999999987532  122346899999999985  4689999999987655322  


Q ss_pred             hhhhhhhhccCcCCCCEEEEEecchhHHHH
Q psy1413         303 SVGVHACRRAGVTLGSKVLITGAGPIGLVT  332 (408)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~  332 (408)
                      .+++...       ++.+++.|+|++|+++
T Consensus       150 ~~~~~~~-------~~~vlv~g~gp~gl~a  172 (177)
T d1jqba1         150 YHGFDHI-------EEALLLMKDKPKDLIK  172 (177)
T ss_dssp             EESGGGH-------HHHHHHHHHCCTTCSE
T ss_pred             HHHHHHh-------cCceEEECCCHHHhhe
Confidence            1222222       2346777778777644

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.41  E-value=7.2e-14  Score=115.86  Aligned_cols=91  Identities=21%  Similarity=0.234  Sum_probs=73.4

Q ss_pred             hhhhhhc-cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHH
Q psy1413         305 GVHACRR-AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHII  382 (408)
Q Consensus       305 ~~~~~~~-~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~  382 (408)
                      +++++.+ ...++++++||+|+ |++|++++|+|+.+|++ |+.++++++|.++++++|++.++++++      ......
T Consensus        11 a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~~~~lGad~vi~~~~------~~~~~~   83 (167)
T d1tt7a2          11 SVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYD-VVASTGNREAADYLKQLGASEVISRED------VYDGTL   83 (167)
T ss_dssp             HHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCC-EEEEESSSSTHHHHHHHTCSEEEEHHH------HCSSCC
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCc-eEEEecCHHHHHHHHhhcccceEeccc------hhchhh
Confidence            4455543 44556788999998 99999999999999998 899999999999999999999998743      222333


Q ss_pred             HHhcCCCCceEEEcccchhh
Q psy1413         383 ELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       383 ~~~~~~~~d~i~d~~g~~~~  402 (408)
                      ..+.++++|+|||++|+...
T Consensus        84 ~~~~~~gvd~vid~vgg~~~  103 (167)
T d1tt7a2          84 KALSKQQWQGAVDPVGGKQL  103 (167)
T ss_dssp             CSSCCCCEEEEEESCCTHHH
T ss_pred             hcccCCCceEEEecCcHHHH
Confidence            44567899999999997754

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.40  E-value=1.7e-14  Score=123.67  Aligned_cols=63  Identities=24%  Similarity=0.374  Sum_probs=52.6

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCC
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLS   66 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~   66 (408)
                      |+++|||+||+|.+.+.+   .+..+|.++|||++|+|+++|+++++|++||||++.+...+-.+.
T Consensus        40 v~a~giCgsD~~~~~g~~---~~~~~p~i~GhE~~G~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~  102 (199)
T d1cdoa1          40 IIATGVCHTDLYHLFEGK---HKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECR  102 (199)
T ss_dssp             EEEEECCHHHHHHHHTTC---CTTSCSEECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSH
T ss_pred             EEEEEEecchhhhhhhcc---cccccccccccccceEEEEEcCCCceecCCCEEEEeeeccccccc
Confidence            469999999999986433   445789999999999999999999999999999987765444333

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.40  E-value=3.8e-14  Score=121.05  Aligned_cols=166  Identities=23%  Similarity=0.296  Sum_probs=126.7

Q ss_pred             Ccceeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhh
Q psy1413          66 SPILRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA  144 (408)
Q Consensus        66 ~~~~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~  144 (408)
                      ..++..+. .+.. ++.++|++.+.++++.+.++++++.++.+...+   ......+..+|+|+.|+|..+|+..+.++.
T Consensus         9 Aav~~~~g~~l~i-~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~---~~~~~~p~v~GhE~~G~V~~vG~~V~~~~~   84 (197)
T d2fzwa1           9 AAVAWEAGKPLSI-EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA---DPEGCFPVILGHLGAGIVESVGEGVTKLKA   84 (197)
T ss_dssp             EEEBCSTTSCCEE-EEEEECCCCTTEEEEEEEEEECCHHHHHHHHTC---CTTCCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             EEEEccCCCCCEE-EEEECCCCCCCEEEEEEEEecCCCCcHHHHcCC---cccccccccCCcceeeEEEeecCCceecCC
Confidence            34455553 4777 788999999999999999999999888775321   233456778899999999999976444444


Q ss_pred             ccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413         145 TRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG  224 (408)
Q Consensus       145 l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~  224 (408)
                                                                                                      
T Consensus        85 --------------------------------------------------------------------------------   84 (197)
T d2fzwa1          85 --------------------------------------------------------------------------------   84 (197)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CceEEEEEcCceeecCCCcccccccccCCccccccceeecccC--------------------CCCccceeEEeecccee
Q psy1413         225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATP--------------------PDHGNLSRYYRHAADFC  284 (408)
Q Consensus       225 ~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~~~~~~~~~~~  284 (408)
                              +|+|.+.+..+|+.|..|..+.++.|.+.......                    ..+|+|+||.++++..+
T Consensus        85 --------GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~  156 (197)
T d2fzwa1          85 --------GDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISV  156 (197)
T ss_dssp             --------TCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             --------CCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHE
Confidence                    89999999999999999999999999764332110                    11489999999999999


Q ss_pred             eeCCCCCCcccccccc-hhhhhhhhhhc-cCcCCCCEEEEE
Q psy1413         285 HKLPDHVSLEEGALLE-PLSVGVHACRR-AGVTLGSKVLIT  323 (408)
Q Consensus       285 ~~~p~~~~~~~aa~~~-~~~~~~~~~~~-~~~~~~~~~lv~  323 (408)
                      +++|++++.++++++. .+.+.+.++.. ..-+..+++||+
T Consensus       157 ~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         157 AKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             EECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             EECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9999999999988776 55555666533 223566777774

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.38  E-value=1.8e-13  Score=114.98  Aligned_cols=156  Identities=26%  Similarity=0.458  Sum_probs=122.9

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccc------cccccccccccCcceeEEEccCchHHHHhhccCC
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIG------DFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPG  148 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG------~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~g  148 (408)
                      +.+ ++.++|.+.+.++++.+.++++++.++.+.. |..+      .....++..+|.|+.|+|+.+|.....++.    
T Consensus        13 l~i-~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~-G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~v~~~~~----   86 (177)
T d1jvba1          13 LSL-QEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQ-GRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK----   86 (177)
T ss_dssp             CEE-EECCCCCCCTTCEEEEEEEEEECTHHHHHTT-TEETTEETTTTTCCCSCEECCCEEEEEEEEECTTCCSCCT----
T ss_pred             CEE-EEeeCCCCCCCEEEEEEEEEecccceeeeec-CcccccccccccccCCCccccceEEEEEeeeccCcccccc----
Confidence            667 6788899999999999999999998887642 2222      223456778999999999999975444444    


Q ss_pred             cEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceE
Q psy1413         149 GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIK  228 (408)
Q Consensus       149 G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~k  228 (408)
                                                                                                      
T Consensus        87 --------------------------------------------------------------------------------   86 (177)
T d1jvba1          87 --------------------------------------------------------------------------------   86 (177)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccc-eeeeCCCCCCccccccc-chhhhhh
Q psy1413         229 VMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD-FCHKLPDHVSLEEGALL-EPLSVGV  306 (408)
Q Consensus       229 vvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~-~~~~~~~  306 (408)
                          +|+|++.+..+|+.|..|+.++++.|.+..++|.. .+|+|+||+.+++. .++++|+..+.+.++.. .++++++
T Consensus        87 ----GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~-~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~a~  161 (177)
T d1jvba1          87 ----GDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN-FDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAI  161 (177)
T ss_dssp             ----TCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTT-BCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHHHH
T ss_pred             ----CceEeeeeccccccccccccccccccCCcceeeec-cccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHHHH
Confidence                99999999999999999999999999999988874 67999999999754 46677766665555443 4788888


Q ss_pred             hhhhccCcCCCCEEEE
Q psy1413         307 HACRRAGVTLGSKVLI  322 (408)
Q Consensus       307 ~~~~~~~~~~~~~~lv  322 (408)
                      +++..... .++++||
T Consensus       162 ~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         162 DNLENFKA-IGRQVLI  176 (177)
T ss_dssp             HHHHTTCC-CSEEEEE
T ss_pred             HHHHhhcc-cCCceEC
Confidence            88877666 4788876

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.38  E-value=2.2e-14  Score=122.63  Aligned_cols=58  Identities=26%  Similarity=0.351  Sum_probs=50.0

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR   61 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~   61 (408)
                      |+++|||+||++++.+++   ....+|.++|||++|+|+++|++|+++++||||++.+...
T Consensus        38 v~a~gic~sD~~~~~G~~---~~~~~p~v~GhE~~G~V~~vG~~V~~~~~GdrV~v~~~~~   95 (197)
T d2fzwa1          38 IIATAVCHTDAYTLSGAD---PEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQ   95 (197)
T ss_dssp             EEEEECCHHHHHHHHTCC---TTCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCC
T ss_pred             EEEecCCCCcHHHHcCCc---ccccccccCCcceeeEEEeecCCceecCCCCEEEEccccc
Confidence            469999999999996432   4457899999999999999999999999999999876443

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=9.7e-13  Score=109.85  Aligned_cols=98  Identities=38%  Similarity=0.621  Sum_probs=88.2

Q ss_pred             cCCeEEEEccCccccccccccccccC---------------------------------------------cceeEEEcc
Q psy1413         101 CGSDVHYLTHGQIGDFRLSDPMIVGH---------------------------------------------EASGIVSKV  135 (408)
Q Consensus       101 ~g~~vlv~g~G~vG~~~i~~a~~~G~---------------------------------------------~~~~vv~~~  135 (408)
                      .+++|+|+|+|++|+.++++++.+|+                                             .++.+++++
T Consensus        26 ~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~  105 (171)
T d1pl8a2          26 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT  105 (171)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred             CCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEecc
Confidence            47899999999999999999887775                                             356788889


Q ss_pred             CchH---HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCC
Q psy1413         136 GAKV---KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVD  198 (408)
Q Consensus       136 g~~~---~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~  198 (408)
                      |...   +++++++++|+++.+|.+..+.++++..+++|++++.|++.++++|+++++|+++|+++
T Consensus       106 G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         106 GAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVN  171 (171)
T ss_dssp             CCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTSCC
T ss_pred             CCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCCHhHHHHHHHHHHcCCCC
Confidence            8754   68999999999999999998899999999999999999998889999999999999974

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.35  E-value=1.7e-13  Score=114.69  Aligned_cols=103  Identities=21%  Similarity=0.239  Sum_probs=78.8

Q ss_pred             CCcccccccch-hhhhhhhh---hccCcC-CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCe
Q psy1413         291 VSLEEGALLEP-LSVGVHAC---RRAGVT-LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADA  364 (408)
Q Consensus       291 ~~~~~aa~~~~-~~~~~~~~---~~~~~~-~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~  364 (408)
                      +++.+|+.+++ ..|+|+++   ...... .++++||+|+ |++|++++|++|.+|++ ||+++++++|.+.++++|+|+
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~-Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQ-VVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCC-eEEEecchhHHHHHHhhcccc
Confidence            46677887774 44666544   334444 4569999999 99999999999999998 888999999999999999999


Q ss_pred             EEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413         365 TVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST  402 (408)
Q Consensus       365 ~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~  402 (408)
                      ++|+++.    +..+   .+ .....|.++|++|++..
T Consensus        80 vi~~~~~----~~~~---~l-~~~~~~~vvD~Vgg~~~  109 (177)
T d1o89a2          80 VLPRDEF----AESR---PL-EKQVWAGAIDTVGDKVL  109 (177)
T ss_dssp             EEEGGGS----SSCC---SS-CCCCEEEEEESSCHHHH
T ss_pred             ccccccH----HHHH---HH-HhhcCCeeEEEcchHHH
Confidence            9998762    2211   11 24467999999997643

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.34  E-value=2.8e-13  Score=116.35  Aligned_cols=70  Identities=20%  Similarity=0.251  Sum_probs=57.4

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~p~~   74 (408)
                      |+++|||+||++.++ |   .++..+|+++|||++|+|+++|++|+++++||||++.+...+..+..|..+..+
T Consensus        40 v~a~gic~sD~~~~~-G---~~~~~~P~v~GHE~~G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~  109 (202)
T d1e3ia1          40 VIATCVCPTDINATD-P---KKKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTN  109 (202)
T ss_dssp             EEEEECCHHHHHTTC-T---TSCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCC
T ss_pred             EEEEEEeccccceee-e---ecccccccccccccceEEeeecCCceeccCCCEEEEEeeccccccccccCCccc
Confidence            579999999999985 3   345678999999999999999999999999999998887666555555554333

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.30  E-value=2.7e-12  Score=106.97  Aligned_cols=96  Identities=43%  Similarity=0.656  Sum_probs=86.1

Q ss_pred             cCCeEEEEccCccccccccccccccC----------------------------------------------cceeEEEc
Q psy1413         101 CGSDVHYLTHGQIGDFRLSDPMIVGH----------------------------------------------EASGIVSK  134 (408)
Q Consensus       101 ~g~~vlv~g~G~vG~~~i~~a~~~G~----------------------------------------------~~~~vv~~  134 (408)
                      .+++++|+|+|++|++++|+++.+|+                                              .++.++++
T Consensus        26 ~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~  105 (170)
T d1e3ja2          26 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC  105 (170)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred             CCCEEEEEcccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeeec
Confidence            48899999999999999999888775                                              25678888


Q ss_pred             cCchH---HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCC
Q psy1413         135 VGAKV---KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGK  196 (408)
Q Consensus       135 ~g~~~---~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~  196 (408)
                      +|...   +++++++++|+++.+|.+..+.++++..++.|++++.|++.++++|+++++|+++||
T Consensus       106 ~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         106 SGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGR  170 (170)
T ss_dssp             SCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTTS
T ss_pred             CCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCHHHHHHHHHHHHcCC
Confidence            88754   689999999999999999888899999999999999999988899999999999986

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.26  E-value=1.8e-13  Score=113.87  Aligned_cols=119  Identities=21%  Similarity=0.250  Sum_probs=94.9

Q ss_pred             eecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccCc---------------------------
Q psy1413          76 RFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGHE---------------------------  127 (408)
Q Consensus        76 ~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~~---------------------------  127 (408)
                      ++++.++++....|++.+. ....+ .+++++|+|+|++|++++|+++.+|++                           
T Consensus         2 ~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~   80 (166)
T d1llua2           2 EFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQ   80 (166)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccccc
Confidence            4556777777666666432 22333 588999999999999999999988861                           


Q ss_pred             -------------ceeEEEccCchH---HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHH
Q psy1413         128 -------------ASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALA  190 (408)
Q Consensus       128 -------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~  190 (408)
                                   .+.++++.+...   +++++++++|+++.+|.+..+.+++...+++|++++.|++.++ ++++++++
T Consensus        81 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~d~~e~l~  160 (166)
T d1llua2          81 EDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALD  160 (166)
T ss_dssp             SCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHH
T ss_pred             hhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHHHHHHHHH
Confidence                         233444444433   6899999999999999998899999999999999999999887 88999999


Q ss_pred             HHHcC
Q psy1413         191 MVASG  195 (408)
Q Consensus       191 l~~~g  195 (408)
                      |+++|
T Consensus       161 l~~~G  165 (166)
T d1llua2         161 FAGEG  165 (166)
T ss_dssp             HHHTT
T ss_pred             HHHCc
Confidence            99987

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.24  E-value=1.3e-12  Score=109.62  Aligned_cols=64  Identities=28%  Similarity=0.486  Sum_probs=51.7

Q ss_pred             CCeeeecccchhhhhcCCCC------CCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccC
Q psy1413           1 MHCVGICGSDVHYLTHGQIG------DFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCL   65 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~------~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~   65 (408)
                      |+++|||++|+++++ |.++      ....++|+++|||++|+|+++|++|++||+||||.+.+...+..+
T Consensus        32 v~a~gic~~D~~~~~-G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c  101 (177)
T d1jvba1          32 VEAAGVCHSDVHMRQ-GRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNC  101 (177)
T ss_dssp             EEEEEECTHHHHHTT-TEETTEETTTTTCCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSS
T ss_pred             EEEEecccceeeeec-CcccccccccccccCCCccccceEEEEEeeeccCccccccCceEeeeeccccccc
Confidence            468999999999984 4322      233578999999999999999999999999999998775544333

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.24  E-value=3.4e-13  Score=112.35  Aligned_cols=124  Identities=25%  Similarity=0.268  Sum_probs=97.3

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC----------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH----------------------------  126 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~----------------------------  126 (408)
                      ++++++++++....+++.+....-.-++++++|.|+|++|++++++++..|+                            
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~   80 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLK   80 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceeccccc
Confidence            3566777777766555532221222258899999999999999999888776                            


Q ss_pred             ------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHH
Q psy1413         127 ------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALA  190 (408)
Q Consensus       127 ------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~  190 (408)
                                  +.+.++++.+...   +++++++++|+++.+|.+.++.+++...+++|++++.|++.++ ++++++++
T Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~l~  160 (168)
T d1rjwa2          81 EDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQ  160 (168)
T ss_dssp             SCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHH
T ss_pred             chhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHHHHHHHHH
Confidence                        2334444544433   6899999999999999999999999999999999999999877 88999999


Q ss_pred             HHHcCCCC
Q psy1413         191 MVASGKVD  198 (408)
Q Consensus       191 l~~~g~~~  198 (408)
                      |+++|+++
T Consensus       161 l~~~Gkik  168 (168)
T d1rjwa2         161 FAAEGKVK  168 (168)
T ss_dssp             HHHTTSCC
T ss_pred             HHHhCCCC
Confidence            99999874

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.21  E-value=4.9e-13  Score=111.60  Aligned_cols=119  Identities=16%  Similarity=0.143  Sum_probs=95.6

Q ss_pred             ecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC----------------------------
Q psy1413          77 FREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH----------------------------  126 (408)
Q Consensus        77 ~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~----------------------------  126 (408)
                      +.++++++....+++.+. ....+ .+++++|+| +|++|+.++++++.+|.                            
T Consensus         3 ~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~   81 (170)
T d1jvba2           3 AVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS   81 (170)
T ss_dssp             HHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETT
T ss_pred             HHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccC
Confidence            345666666555555432 22223 578899999 59999999988876663                            


Q ss_pred             ---------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHH
Q psy1413         127 ---------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPI  187 (408)
Q Consensus       127 ---------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~  187 (408)
                                     .++.+++++|+..   +++++++++|+++.+|.+..+.+++...+++|++++.|++.++ +++++
T Consensus        82 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~~d~~~  161 (170)
T d1jvba2          82 MQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLG  161 (170)
T ss_dssp             TSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCHHHHHH
T ss_pred             CcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCHHHHHH
Confidence                           3677888888753   6799999999999999998899999999999999999999987 88999


Q ss_pred             HHHHHHcCC
Q psy1413         188 ALAMVASGK  196 (408)
Q Consensus       188 ~~~l~~~g~  196 (408)
                      +++|+++||
T Consensus       162 ~l~lv~~GK  170 (170)
T d1jvba2         162 IMRLAEAGK  170 (170)
T ss_dssp             HHHHHHTTS
T ss_pred             HHHHHHcCC
Confidence            999999986

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.17  E-value=5.7e-12  Score=104.74  Aligned_cols=98  Identities=19%  Similarity=0.144  Sum_probs=84.9

Q ss_pred             cCCeEEEEccCccccccccccccccC--------------------------------------cceeEEEccCchH---
Q psy1413         101 CGSDVHYLTHGQIGDFRLSDPMIVGH--------------------------------------EASGIVSKVGAKV---  139 (408)
Q Consensus       101 ~g~~vlv~g~G~vG~~~i~~a~~~G~--------------------------------------~~~~vv~~~g~~~---  139 (408)
                      .+++++|+|+|++|++++|+++.+|+                                      .++.+++++++..   
T Consensus        27 ~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~  106 (168)
T d1piwa2          27 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID  106 (168)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCC
T ss_pred             CCCEEEEECCCCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEEEEecCCccch
Confidence            58899999999999999999998886                                      2455666655432   


Q ss_pred             --HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCC
Q psy1413         140 --KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVD  198 (408)
Q Consensus       140 --~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~  198 (408)
                        +++++++++|+++.+|.+..+.++++..+++|++++.|++..+ ++++++++|+++|+++
T Consensus       107 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         107 FNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             TTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCHHHHHHHHHHHHhCCCC
Confidence              6799999999999999998888999999999999999998876 8999999999999874

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.16  E-value=2.8e-12  Score=107.39  Aligned_cols=118  Identities=12%  Similarity=-0.067  Sum_probs=82.5

Q ss_pred             CCeeeecccchhhhhcCCC-------CCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCC
Q psy1413           1 MHCVGICGSDVHYLTHGQI-------GDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLS   66 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~-------~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~   66 (408)
                      |+++|||++|++++++.+.       +.....+|.++|||++|+|++.|.++..++.||||....       +|...+.+
T Consensus        40 v~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~  119 (175)
T d1gu7a1          40 TLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDD  119 (175)
T ss_dssp             EEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGG
T ss_pred             EEEeccCcceeEEEecCcccccccccccCCCCCCcccccccccccccccccccccccccceeccccccccccceeeehhh
Confidence            5799999999998853321       111235789999999999999999999999999997433       44566777


Q ss_pred             cceeccceeeecccccCCCCCCcceEE-EEeeeee-cCCeEEEEc-c-Cccccccccc
Q psy1413          67 PILRRRFSLRFREQKPIEDPDDHEVLL-EMHCVGI-CGSDVHYLT-H-GQIGDFRLSD  120 (408)
Q Consensus        67 ~~~~~p~~~~~~~~~~lp~~~~~~~~~-~~~~~~~-~g~~vlv~g-~-G~vG~~~i~~  120 (408)
                      .++..|+.+.. +.+ ++....+++.. ......+ .++++++.| + |++|++++|+
T Consensus       120 ~~~~iP~~~~~-~~a-~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         120 DFIKLPNPAQS-KAN-GKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             GEEEECCHHHH-HHT-TCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             hccCCCccchh-hhh-ccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            78888887765 333 33333344433 2223334 477788876 3 6799999985

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.14  E-value=2.6e-11  Score=85.53  Aligned_cols=71  Identities=18%  Similarity=0.236  Sum_probs=59.0

Q ss_pred             CCcccccccc-hhhhhhhhh----hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCC
Q psy1413         291 VSLEEGALLE-PLSVGVHAC----RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGA  362 (408)
Q Consensus       291 ~~~~~aa~~~-~~~~~~~~~----~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga  362 (408)
                      +|+++++.++ ...|++.++    +....++++++||+|+ |++|.+++|+++.+|++ |+.++++++|.++++++||
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~-Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQ-VVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCe-EEEEECCHHHHHHHHHCCC
Confidence            4567777777 444565544    4456789999999999 99999999999999997 9999999999999999986

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.12  E-value=1.4e-12  Score=106.55  Aligned_cols=104  Identities=13%  Similarity=0.098  Sum_probs=76.7

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc------------cCcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV------------PEFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~------------~~~~~~~~~~~   68 (408)
                      |+++|||++|++.+++.+  .....+|.++|||++|+|++  ++++.+++||+|...            .+|...+...+
T Consensus        37 V~a~gin~~D~~~~~g~~--~~~~~~p~v~g~e~~G~v~~--~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~  112 (152)
T d1xa0a1          37 VHYSSVNYKDGLASIPDG--KIVKTYPFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWL  112 (152)
T ss_dssp             EEEEECCHHHHHHTSGGG--SSCCSSSBCCCSEEEEEEEE--CCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGC
T ss_pred             EEEeCCChHHHHHHhhcc--cccccccceeeeeeeeeeec--cCCCccccCCEEEEecCccccccCCCcceeeeehhhcc
Confidence            579999999999875332  23457899999999999999  667899999999743            35566777788


Q ss_pred             eeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEc
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLT  109 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g  109 (408)
                      +..|++++. ++++++....++++.......++|++|++.|
T Consensus       113 ~~iP~~l~~-~aa~l~~a~~ta~~~~~~~~~~~G~tVL~l~  152 (152)
T d1xa0a1         113 VPLPKGLER-IAQEISLAELPQALKRILRGELRGRTVVRLA  152 (152)
T ss_dssp             EECCTTHHH-HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             ccCCCCCCH-HHHHHHHHHHHHHHHHHHhcCCCCCEEEEcC
Confidence            888888875 6666766555554444444455688888764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.11  E-value=3.7e-11  Score=100.12  Aligned_cols=117  Identities=17%  Similarity=0.232  Sum_probs=95.4

Q ss_pred             ccccCCCCCCcceEEEEeee-e-ecCCeEEEEccCccccccccccccccC------------------------------
Q psy1413          79 EQKPIEDPDDHEVLLEMHCV-G-ICGSDVHYLTHGQIGDFRLSDPMIVGH------------------------------  126 (408)
Q Consensus        79 ~~~~lp~~~~~~~~~~~~~~-~-~~g~~vlv~g~G~vG~~~i~~a~~~G~------------------------------  126 (408)
                      +.++++.+..+++.+..... . -++++++|+|+|++|+.++|+++.+|+                              
T Consensus         8 eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~   87 (172)
T d1h2ba2           8 EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD   87 (172)
T ss_dssp             HTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC
T ss_pred             HHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCccc
Confidence            56677777777764433322 1 357899999999999999999887775                              


Q ss_pred             ------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHH
Q psy1413         127 ------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALA  190 (408)
Q Consensus       127 ------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~  190 (408)
                                  .++.+++++|...   +++++++++|+++.+|.. .+.++++..+++|++++.|++.++ .+++++++
T Consensus        88 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~-~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~~~l~  166 (172)
T d1h2ba2          88 PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGSLVGNYVELHELVT  166 (172)
T ss_dssp             HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS-SCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHH
T ss_pred             HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCc-ccccCCHHHHHhCCcEEEEEEecCHHHHHHHHH
Confidence                        3677888888653   689999999999999975 457899999999999999999887 88999999


Q ss_pred             HHHcCC
Q psy1413         191 MVASGK  196 (408)
Q Consensus       191 l~~~g~  196 (408)
                      |+++||
T Consensus       167 l~~~GK  172 (172)
T d1h2ba2         167 LALQGK  172 (172)
T ss_dssp             HHHTTS
T ss_pred             HHHcCC
Confidence            999986

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.09  E-value=5.9e-12  Score=105.26  Aligned_cols=118  Identities=15%  Similarity=0.114  Sum_probs=91.1

Q ss_pred             ccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC-------------------------------
Q psy1413          79 EQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH-------------------------------  126 (408)
Q Consensus        79 ~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~-------------------------------  126 (408)
                      ..++++....|++.+......+ .+++|+|+|+|++|++++|+++.+|+                               
T Consensus         5 ~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~   84 (174)
T d1f8fa2           5 LLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQD   84 (174)
T ss_dssp             GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSC
T ss_pred             HHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCCCcC
Confidence            3445555455554332322223 58899999999999999999887775                               


Q ss_pred             -----------cceeEEEccCchH---HHHhhccCCcEEEEEccCC--CCcccCHHHHHhcCcEEEEeecCC----CcHH
Q psy1413         127 -----------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGS--QDVKIPLVLTMTKEIDIRGVFRYA----NDYP  186 (408)
Q Consensus       127 -----------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l~g~~~~~----~~~~  186 (408)
                                 .++.+++++|+..   +++++++++|+++.+|.+.  .+.+++...+++|++++.|++..+    ++++
T Consensus        85 ~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~~~~  164 (174)
T d1f8fa2          85 PVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIP  164 (174)
T ss_dssp             HHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCHHHHHH
T ss_pred             HHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCCChHHHHH
Confidence                       2678889998754   6799999999999999764  467889999999999999997432    5789


Q ss_pred             HHHHHHHcCC
Q psy1413         187 IALAMVASGK  196 (408)
Q Consensus       187 ~~~~l~~~g~  196 (408)
                      ++++|+++||
T Consensus       165 ~~~~l~~~Gk  174 (174)
T d1f8fa2         165 ELVRLYQQGK  174 (174)
T ss_dssp             HHHHHHHTTS
T ss_pred             HHHHHHHcCC
Confidence            9999999986

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.08  E-value=3.3e-11  Score=99.98  Aligned_cols=97  Identities=18%  Similarity=0.193  Sum_probs=80.5

Q ss_pred             cCCeEEEEccCccccccccccccccC-------------------------------------cceeEEEccCchH---H
Q psy1413         101 CGSDVHYLTHGQIGDFRLSDPMIVGH-------------------------------------EASGIVSKVGAKV---K  140 (408)
Q Consensus       101 ~g~~vlv~g~G~vG~~~i~~a~~~G~-------------------------------------~~~~vv~~~g~~~---~  140 (408)
                      .|++|+|+|+|++|++++|+++.+|+                                     .++.+++++|...   +
T Consensus        30 ~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~  109 (168)
T d1uufa2          30 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDD  109 (168)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCHHH
T ss_pred             CCCEEEEeccchHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEECchhhHHHHhcCCCceeeeeeecchhHHH
Confidence            58899999999999999999998886                                     3677888887543   6


Q ss_pred             HHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCC
Q psy1413         141 HLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKV  197 (408)
Q Consensus       141 ~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~  197 (408)
                      ++++++++|+++.+|.+.. ...++...+++|++++.|++.++ ++++++++|++++++
T Consensus       110 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         110 FTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGI  168 (168)
T ss_dssp             HHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHHHHHHHHHHHHHcCC
Confidence            8999999999999998765 45678889999999999999887 899999999998764

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.02  E-value=4.9e-12  Score=105.38  Aligned_cols=124  Identities=17%  Similarity=0.155  Sum_probs=92.3

Q ss_pred             eeecccccCCCCCCcceEEEE---eee-eecCCeEEEEc-cCccccccccccccccC-----------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEM---HCV-GICGSDVHYLT-HGQIGDFRLSDPMIVGH-----------------------  126 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~---~~~-~~~g~~vlv~g-~G~vG~~~i~~a~~~G~-----------------------  126 (408)
                      ++++|++.+|.+..|++.+..   ... ...+++|+|.| +|+||.+++|+++.+|+                       
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~v   80 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV   80 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccccee
Confidence            356677777877777753211   112 22488999988 79999999999998886                       


Q ss_pred             -----------------cceeEEEccCchH--HHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecCC---C
Q psy1413         127 -----------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRYA---N  183 (408)
Q Consensus       127 -----------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~~---~  183 (408)
                                       .++.+++.+|...  +++++|+++||++.+|... ...++++..+++|++++.|.....   +
T Consensus        81 i~~~~~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~~~~~~~  160 (176)
T d1xa0a2          81 LAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMD  160 (176)
T ss_dssp             EECC---------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHH
T ss_pred             eecchhHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeCCcCCHH
Confidence                             4667778877553  7899999999999999764 467899999999999999965433   4


Q ss_pred             cHHHHHHHHHcCCCCC
Q psy1413         184 DYPIALAMVASGKVDV  199 (408)
Q Consensus       184 ~~~~~~~l~~~g~~~~  199 (408)
                      ...++++.++ ++++|
T Consensus       161 ~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         161 LRLRIWERLA-GDLKP  175 (176)
T ss_dssp             HHHHHHHHHH-TTTCC
T ss_pred             HHHHHHHHHh-cccCC
Confidence            4555666653 66665

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.00  E-value=3.2e-11  Score=99.33  Aligned_cols=90  Identities=16%  Similarity=0.098  Sum_probs=71.8

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~   68 (408)
                      |+++|||++|++.+.+.+  .....+|.++|||++|+|++  +.+.++++||+|+...            ++...+.+.+
T Consensus        37 V~a~gin~~D~~~~~g~~--~~~~~~~~~~g~e~~G~v~~--~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l  112 (162)
T d1tt7a1          37 VAYSGINYKDGLAGKAGG--NIVREYPLILGIDAAGTVVS--SNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWL  112 (162)
T ss_dssp             ECCEEECHHHHHHTSTTC--TTCSSCSEECCSEEEEEEEE--CSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGE
T ss_pred             EEEecccchhhheeeecc--cccccceeeeeeeccccccc--ccccccccceeeEeeeccceeccccccceEEEecHHHE
Confidence            579999999999885432  23446789999999999999  6678999999998543            4556778888


Q ss_pred             eeccceeeecccccCCCCCCcceEEE
Q psy1413          69 LRRRFSLRFREQKPIEDPDDHEVLLE   94 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~~~~~~~~   94 (408)
                      +..|+++++++++.+|....+++.+.
T Consensus       113 ~~iP~~ls~~~Aa~~~~~~~ta~~~~  138 (162)
T d1tt7a1         113 VPLPQNLSLKEAMVDQLLTIVDREVS  138 (162)
T ss_dssp             EECCTTCCHHHHHHSCSTTSEEEEEC
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999988888887777776543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.98  E-value=2.1e-11  Score=103.29  Aligned_cols=122  Identities=20%  Similarity=0.219  Sum_probs=93.5

Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEE--ccCccccccccccccccCc------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYL--THGQIGDFRLSDPMIVGHE------------------------  127 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~--g~G~vG~~~i~~a~~~G~~------------------------  127 (408)
                      +++++++++|..+.|++.+......+ +|++++|+  ++|++|++++|+|+.+|+.                        
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            46778888998888888655444455 46788886  4688999999999988762                        


Q ss_pred             ---------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccC-CCCcccCHHHHHhcCcEEEE
Q psy1413         128 ---------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAG-SQDVKIPLVLTMTKEIDIRG  177 (408)
Q Consensus       128 ---------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~-~~~~~~~~~~~~~~~~~l~g  177 (408)
                                                 ++.+++++|.+.  +.+++|+++|+++.+|.. ..+.+++...+++|++++.|
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~G  160 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAG  160 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEE
T ss_pred             EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEEE
Confidence                                       344566665432  679999999999999954 56788999999999999999


Q ss_pred             eecCC----------CcHHHHHHHHHcCC
Q psy1413         178 VFRYA----------NDYPIALAMVASGK  196 (408)
Q Consensus       178 ~~~~~----------~~~~~~~~l~~~g~  196 (408)
                      .+..+          +.++++++|+++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         161 FWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             CCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            76431          34788888888875

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=98.96  E-value=3.9e-10  Score=93.74  Aligned_cols=115  Identities=19%  Similarity=0.170  Sum_probs=87.4

Q ss_pred             ccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC---------------------------------
Q psy1413          81 KPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH---------------------------------  126 (408)
Q Consensus        81 ~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~---------------------------------  126 (408)
                      +++...+.|++.+......+ .|++|+|+|+|++|++++|+++.+|+                                 
T Consensus         7 a~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~   86 (174)
T d1e3ia2           7 CLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKP   86 (174)
T ss_dssp             GGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSC
T ss_pred             HHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhh
Confidence            33444444444332222223 58999999999999999999998875                                 


Q ss_pred             -----------cceeEEEccCchH---HHHhhccCC-cEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC----CcHHH
Q psy1413         127 -----------EASGIVSKVGAKV---KHLKATRPG-GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA----NDYPI  187 (408)
Q Consensus       127 -----------~~~~vv~~~g~~~---~~~~~l~~g-G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~----~~~~~  187 (408)
                                 .++.+++++|...   +++++++++ |+++.+|.+.++.+++...+++ +.+|.|++..+    +++++
T Consensus        87 ~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~Gs~~Gs~~~~~d~p~  165 (174)
T d1e3ia2          87 VQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGWKSVDSVPN  165 (174)
T ss_dssp             HHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEEECSGGGCCHHHHHHH
T ss_pred             hhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEEEEEeeCCChHHHHHH
Confidence                       4678889998864   789999996 9999999998888998877654 67899887432    67899


Q ss_pred             HHHHHHcCC
Q psy1413         188 ALAMVASGK  196 (408)
Q Consensus       188 ~~~l~~~g~  196 (408)
                      +++++++||
T Consensus       166 li~l~~~GK  174 (174)
T d1e3ia2         166 LVSDYKNKK  174 (174)
T ss_dssp             HHHHHHTTS
T ss_pred             HHHHHHCcC
Confidence            999999886

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.1e-11  Score=103.51  Aligned_cols=120  Identities=23%  Similarity=0.267  Sum_probs=92.7

Q ss_pred             eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC--------------------------
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH--------------------------  126 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~--------------------------  126 (408)
                      +++++++++|.++.+++.+......+ ++++|+|+| +|++|++++|+++.+|+                          
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~   80 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNH   80 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCccccccc
Confidence            35667778888887777544334444 588999999 59999999999998886                          


Q ss_pred             ----------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC---CcH
Q psy1413         127 ----------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA---NDY  185 (408)
Q Consensus       127 ----------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~---~~~  185 (408)
                                      .++.+++++|...  +++++++++|+++.+|.. .+.+++...++.|++++.|++.++   +++
T Consensus        81 ~~~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~-~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~  159 (174)
T d1yb5a2          81 REVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEF  159 (174)
T ss_dssp             TSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGGCCHHHH
T ss_pred             ccccHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecC-CCCCCCHHHHHHCCCEEEEEEecCCCHHHH
Confidence                            2555666666432  679999999999999964 467888899999999999997553   568


Q ss_pred             HHHHHHHHcC
Q psy1413         186 PIALAMVASG  195 (408)
Q Consensus       186 ~~~~~l~~~g  195 (408)
                      ++++++++++
T Consensus       160 ~~~~~~l~~g  169 (174)
T d1yb5a2         160 QQYAAALQAG  169 (174)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            8888888764

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.93  E-value=2e-11  Score=96.47  Aligned_cols=80  Identities=19%  Similarity=0.073  Sum_probs=61.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS   74 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~   74 (408)
                      |+++|||++|++.++ |.+. ...++|+++|||++|+|           +||||....      ++...+.+.++..|++
T Consensus        32 v~a~gin~~D~~~~~-G~~~-~~~~~P~v~G~E~~G~V-----------vGd~V~~~~~~G~~aey~~v~~~~~~~~P~~   98 (131)
T d1iz0a1          32 VEAVGLNFADHLMRL-GAYL-TRLHPPFIPGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEG   98 (131)
T ss_dssp             EEEEEECHHHHHHHH-TCSS-SCCCSSBCCCCEEEEEE-----------TTEEEEEECSSCCSBSEEEEEGGGCEECCTT
T ss_pred             EEEEecccccccccc-cccc-ccccceeEeeeeeEEee-----------ccceEEEEeccCccceeeeeCHHHeEEccCC
Confidence            479999999999885 3322 33478999999999999           399997543      5567778888999999


Q ss_pred             eeecccccCCCCCCcceEE
Q psy1413          75 LRFREQKPIEDPDDHEVLL   93 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~   93 (408)
                      +++++++.++..+.+++.+
T Consensus        99 ~~~~~aa~~~~~~~Ta~~a  117 (131)
T d1iz0a1          99 RPVVGPVFPFAEAEAAFRA  117 (131)
T ss_dssp             CCCEEEEEEGGGHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            9997777777666666533

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=4.5e-10  Score=90.99  Aligned_cols=136  Identities=21%  Similarity=0.322  Sum_probs=103.2

Q ss_pred             ccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcE
Q psy1413          71 RRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGC  150 (408)
Q Consensus        71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~  150 (408)
                      .|+.+.+.+..++|.+.+.++++.+.+++++..++.... |.. .....+....|.|+.|+|..+|+..+.++.      
T Consensus        13 ~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~-g~~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v------   84 (150)
T d1yb5a1          13 GPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRS-GTY-SRKPLLPYTPGSDVAGVIEAVGDNASAFKK------   84 (150)
T ss_dssp             SGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHH-TCS-SCCCCSSBCCCSCEEEEEEEECTTCTTCCT------
T ss_pred             CcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhc-CCc-CccccccccCccceeeeeEeecceeecccc------
Confidence            567777755678888889999999999999987765532 211 122355667899999999999976544444      


Q ss_pred             EEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413         151 LVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM  230 (408)
Q Consensus       151 iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv  230 (408)
                                                                                                      
T Consensus        85 --------------------------------------------------------------------------------   84 (150)
T d1yb5a1          85 --------------------------------------------------------------------------------   84 (150)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh
Q psy1413         231 IHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC  309 (408)
Q Consensus       231 i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~  309 (408)
                        +|+|...                           ...+|+|++|+.++++.++++|+++++++|+.++ ...++++.+
T Consensus        85 --GdrV~~~---------------------------~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~  135 (150)
T d1yb5a1          85 --GDRVFTS---------------------------STISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHEN  135 (150)
T ss_dssp             --TCEEEES---------------------------CCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHH
T ss_pred             --Ccccccc---------------------------ccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhh
Confidence              8888532                           2357999999999999999999999999998777 455677766


Q ss_pred             -hccCcCCCCEEEEE
Q psy1413         310 -RRAGVTLGSKVLIT  323 (408)
Q Consensus       310 -~~~~~~~~~~~lv~  323 (408)
                       .......++++||.
T Consensus       136 ~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         136 IIHGSGATGKMILLL  150 (150)
T ss_dssp             HHHSSCCSSEEEEEC
T ss_pred             eEEcCcccCCEEEEC
Confidence             55667888888873

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.92  E-value=3.6e-10  Score=90.95  Aligned_cols=83  Identities=18%  Similarity=0.153  Sum_probs=65.3

Q ss_pred             CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc------------cCcccccCCcc
Q psy1413           1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV------------PEFRNVCLSPI   68 (408)
Q Consensus         1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~------------~~~~~~~~~~~   68 (408)
                      |+++|||++|++..+ |.++ ....+|.++|||++|+|+++|.  ..+++||+|.+.            .+|...+.+.+
T Consensus        34 V~a~gin~~D~~~~~-G~~~-~~~~~p~v~G~e~~G~V~~~~~--~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~v  109 (146)
T d1o89a1          34 VHWSSLNYKDALAIT-GKGK-IIRNFPMIPGIDFAGTVRTSED--PRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWL  109 (146)
T ss_dssp             EEEEECCHHHHHHHH-TCSS-CCCSSSBCCCSEEEEEEEEECS--TTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGC
T ss_pred             EeeccCccceeeEEE-eecc-cccccceeccccccccceeecc--CCccceeeEEeecccceecCCCcceeeeeeeeeeE
Confidence            579999999999884 4322 3346799999999999999776  579999999853            34567778888


Q ss_pred             eeccceeeecccccCCCCC
Q psy1413          69 LRRRFSLRFREQKPIEDPD   87 (408)
Q Consensus        69 ~~~p~~~~~~~~~~lp~~~   87 (408)
                      +..|+++++++++.++...
T Consensus       110 v~lP~~ls~~eAA~l~~a~  128 (146)
T d1o89a1         110 VAMPQGQAAKEISLSEAPN  128 (146)
T ss_dssp             EECCTTSCCEEECGGGHHH
T ss_pred             EECCCCCCHHHHHHHHHHH
Confidence            9999999997777776443

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=98.92  E-value=4.3e-10  Score=94.36  Aligned_cols=95  Identities=17%  Similarity=0.282  Sum_probs=80.1

Q ss_pred             cCCeEEEEccCccccccccccccccC----------------------------------------------cceeEEEc
Q psy1413         101 CGSDVHYLTHGQIGDFRLSDPMIVGH----------------------------------------------EASGIVSK  134 (408)
Q Consensus       101 ~g~~vlv~g~G~vG~~~i~~a~~~G~----------------------------------------------~~~~vv~~  134 (408)
                      .|++|+|+|+|++|++++|+++.+|+                                              .++.++++
T Consensus        28 ~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~  107 (182)
T d1vj0a2          28 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA  107 (182)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEeec
Confidence            58999999999999999999988775                                              25678889


Q ss_pred             cCchH---HHHhhccCCcEEEEEccCC--CCcccCHH-HHHhcCcEEEEeecCC-CcHHHHHHHHHcC
Q psy1413         135 VGAKV---KHLKATRPGGCLVIVGAGS--QDVKIPLV-LTMTKEIDIRGVFRYA-NDYPIALAMVASG  195 (408)
Q Consensus       135 ~g~~~---~~~~~l~~gG~iv~~G~~~--~~~~~~~~-~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g  195 (408)
                      +|...   +++++++++|+++.+|.+.  .+++++.. .+++|++++.|++.++ +++++++++++++
T Consensus       108 vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         108 TGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRN  175 (182)
T ss_dssp             SSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCCHHHHHHHHHHHHTC
T ss_pred             CCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCCHHHHHHHHHHHHHC
Confidence            88643   6899999999999999764  35666654 4789999999999987 8899999999875

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=98.90  E-value=3.8e-11  Score=100.07  Aligned_cols=120  Identities=15%  Similarity=0.143  Sum_probs=89.5

Q ss_pred             eecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC----------------------------
Q psy1413          76 RFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH----------------------------  126 (408)
Q Consensus        76 ~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~----------------------------  126 (408)
                      ++++++.+++++.+++.+. ....+ .+++|+|+|+|++|++++|+++.+|+                            
T Consensus         2 p~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~   80 (174)
T d1jqba2           2 PLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYK   80 (174)
T ss_dssp             CHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccccc
Confidence            4544555777777776442 22333 58999999999999999999998775                            


Q ss_pred             ---------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCCCcccCHH----HHHhcCcEEEEeecCC--
Q psy1413         127 ---------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDVKIPLV----LTMTKEIDIRGVFRYA--  182 (408)
Q Consensus       127 ---------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~~~~~~----~~~~~~~~l~g~~~~~--  182 (408)
                                     .++.+++++|+..   +++++++++|+++.+|.+.....+++.    ...++++++.++....  
T Consensus        81 ~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~r  160 (174)
T d1jqba2          81 NGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGR  160 (174)
T ss_dssp             GSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCCCCHH
T ss_pred             chhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecCCCCc
Confidence                           2677899998653   689999999999999987664443322    3456889999987654  


Q ss_pred             CcHHHHHHHHHcCC
Q psy1413         183 NDYPIALAMVASGK  196 (408)
Q Consensus       183 ~~~~~~~~l~~~g~  196 (408)
                      ..++++++++++||
T Consensus       161 ~~~e~l~~li~~gk  174 (174)
T d1jqba2         161 LRAERLRDMVVYNR  174 (174)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             ccHHHHHHHHHcCC
Confidence            45677889998875

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=98.86  E-value=1.8e-09  Score=89.71  Aligned_cols=117  Identities=16%  Similarity=0.142  Sum_probs=83.4

Q ss_pred             cccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC--------------------------------
Q psy1413          80 QKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH--------------------------------  126 (408)
Q Consensus        80 ~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~--------------------------------  126 (408)
                      ++.+.....|++.+......+ .+++|+|+|+|++|++++|+++.+|+                                
T Consensus         5 aa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~   84 (174)
T d1p0fa2           5 SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDK   84 (174)
T ss_dssp             GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSS
T ss_pred             HHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchh
Confidence            334444444454332222233 58899999999999999999988775                                


Q ss_pred             ------------cceeEEEccCchH---HHHhhccC-CcEEEEEccCCCCcccCHH-HHHhcCcEEEEeec--CC-CcHH
Q psy1413         127 ------------EASGIVSKVGAKV---KHLKATRP-GGCLVIVGAGSQDVKIPLV-LTMTKEIDIRGVFR--YA-NDYP  186 (408)
Q Consensus       127 ------------~~~~vv~~~g~~~---~~~~~l~~-gG~iv~~G~~~~~~~~~~~-~~~~~~~~l~g~~~--~~-~~~~  186 (408)
                                  .++.+++++|...   +++..+++ +|+++.+|.+....++++. .++.++++|.|++.  ++ ++++
T Consensus        85 ~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~~d~~  164 (174)
T d1p0fa2          85 PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGEEVS  164 (174)
T ss_dssp             CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCCGGGHH
T ss_pred             HHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCCHHHHH
Confidence                        3567788888654   56777766 5999999987665555443 34467899999983  33 6899


Q ss_pred             HHHHHHHcCC
Q psy1413         187 IALAMVASGK  196 (408)
Q Consensus       187 ~~~~l~~~g~  196 (408)
                      ++++|+++||
T Consensus       165 ~lidl~~~gK  174 (174)
T d1p0fa2         165 RLVDDYMKKK  174 (174)
T ss_dssp             HHHHHHHTTS
T ss_pred             HHHHHHHcCC
Confidence            9999999986

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.70  E-value=1.8e-10  Score=95.71  Aligned_cols=106  Identities=19%  Similarity=0.204  Sum_probs=78.5

Q ss_pred             eecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC---------------------------
Q psy1413          76 RFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH---------------------------  126 (408)
Q Consensus        76 ~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~---------------------------  126 (408)
                      ++++++++|.++.+++.+... ..+ ++++|+|+| +|++|++++|+++.+|+                           
T Consensus         2 s~eeAA~l~~~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~~   80 (171)
T d1iz0a2           2 SPEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYA   80 (171)
T ss_dssp             CHHHHHTSHHHHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeehh
Confidence            455677788777777744322 344 588899988 59999999999998886                           


Q ss_pred             ----------cceeEEEccCchH-HHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecCC
Q psy1413         127 ----------EASGIVSKVGAKV-KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRYA  182 (408)
Q Consensus       127 ----------~~~~vv~~~g~~~-~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~~  182 (408)
                                .++.+++++|... +++++++++|+++.+|... .+.+++...+++|++++.|++..+
T Consensus        81 ~~~~~~~~~~g~D~v~d~~G~~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~  148 (171)
T d1iz0a2          81 EVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTP  148 (171)
T ss_dssp             GHHHHHHHTTSEEEEEECSCTTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHH
T ss_pred             hhhhhhhccccccccccccchhHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcC
Confidence                      3566777776432 6899999999999999875 467889999999999999987543

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=98.65  E-value=2e-08  Score=82.41  Aligned_cols=92  Identities=17%  Similarity=0.196  Sum_probs=74.0

Q ss_pred             cCCeEEEEc-cCccccccccccccccC----------------------------------------cceeEEEccCchH
Q psy1413         101 CGSDVHYLT-HGQIGDFRLSDPMIVGH----------------------------------------EASGIVSKVGAKV  139 (408)
Q Consensus       101 ~g~~vlv~g-~G~vG~~~i~~a~~~G~----------------------------------------~~~~vv~~~g~~~  139 (408)
                      .+++|+|.| +|+||.+++|+|+.+|+                                        .++.+++++|...
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~~~~~~~~gvd~vid~vgg~~  102 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQ  102 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccchhchhhhcccCCCceEEEecCcHHH
Confidence            366899988 79999999999999887                                        3667788887654


Q ss_pred             --HHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecCC---CcHHHHHHHH
Q psy1413         140 --KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRYA---NDYPIALAMV  192 (408)
Q Consensus       140 --~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~~---~~~~~~~~l~  192 (408)
                        +++++|+++|+++.+|... .+.++++..+++|+++++|.....   +..+++.+.+
T Consensus       103 ~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~~~~~~~~~~~~~~l  161 (167)
T d1tt7a2         103 LASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERM  161 (167)
T ss_dssp             HHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHT
T ss_pred             HHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecCCCCHHHHHHHHHHH
Confidence              7899999999999999765 478899999999999999976543   3334444444

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.62  E-value=3e-10  Score=95.43  Aligned_cols=124  Identities=15%  Similarity=0.128  Sum_probs=88.2

Q ss_pred             ccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC------------------------------
Q psy1413          79 EQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH------------------------------  126 (408)
Q Consensus        79 ~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~------------------------------  126 (408)
                      |++++|.++.+++.+......+ .+++|+|+| +|++|++++|+++.+|+                              
T Consensus         2 eAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~~   81 (183)
T d1pqwa_           2 EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVD   81 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCST
T ss_pred             chhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCccC
Confidence            4455566666665443333334 478899987 69999999999998775                              


Q ss_pred             ------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCCc-ccCHHHHHhcCcEEEEeecC----------
Q psy1413         127 ------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDV-KIPLVLTMTKEIDIRGVFRY----------  181 (408)
Q Consensus       127 ------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~-~~~~~~~~~~~~~l~g~~~~----------  181 (408)
                                  .++.+++++|...  +++++++++|+++.+|...... .......+.+++++.+....          
T Consensus        82 ~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (183)
T d1pqwa_          82 FADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARY  161 (183)
T ss_dssp             HHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHHCHHHH
T ss_pred             HHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceeccCHHHH
Confidence                        4677888888643  6899999999999999654322 22222345788888887521          


Q ss_pred             CCcHHHHHHHHHcCCCCCCCc
Q psy1413         182 ANDYPIALAMVASGKVDVKKL  202 (408)
Q Consensus       182 ~~~~~~~~~l~~~g~~~~~~~  202 (408)
                      .+.++++++++++|++++.|+
T Consensus       162 ~~~~~~v~~~i~~G~i~p~Pi  182 (183)
T d1pqwa_         162 RQLLQHILQHVADGKLEVLPV  182 (183)
T ss_dssp             HHHHHHHHHHHHTTSSCCCCC
T ss_pred             HHHHHHHHHHHHCCCCceeCC
Confidence            245788999999999987654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=98.60  E-value=2.1e-09  Score=89.43  Aligned_cols=119  Identities=12%  Similarity=0.016  Sum_probs=85.5

Q ss_pred             cccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC------------------------------
Q psy1413          78 REQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH------------------------------  126 (408)
Q Consensus        78 ~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~------------------------------  126 (408)
                      +++++++....|++.+......+ .|++|+|+|+|++|++++|+++.+|+                              
T Consensus         4 e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~   83 (176)
T d2fzwa2           4 DKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF   83 (176)
T ss_dssp             HHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGC
T ss_pred             HHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCch
Confidence            34455555556666443333333 58899999999999999999988775                              


Q ss_pred             --------------cceeEEEccCchH---HHHhhccCCcEEEEEccCC--CCcccCHHHHHhcCcEEEEeecCC----C
Q psy1413         127 --------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGS--QDVKIPLVLTMTKEIDIRGVFRYA----N  183 (408)
Q Consensus       127 --------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l~g~~~~~----~  183 (408)
                                    .++.+++++|...   +++.++++||+++.++...  .....+....+.+++++.|++..+    +
T Consensus        84 ~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~~~  163 (176)
T d2fzwa2          84 SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVE  163 (176)
T ss_dssp             SSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHH
T ss_pred             hhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCcHHH
Confidence                          3677888888654   6788899998888776443  234444455567899999988543    5


Q ss_pred             cHHHHHHHHHcCC
Q psy1413         184 DYPIALAMVASGK  196 (408)
Q Consensus       184 ~~~~~~~l~~~g~  196 (408)
                      +++++++++++||
T Consensus       164 d~~~li~l~~~GK  176 (176)
T d2fzwa2         164 SVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCC
Confidence            6888999999886

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.55  E-value=4.5e-08  Score=79.08  Aligned_cols=54  Identities=17%  Similarity=0.165  Sum_probs=42.5

Q ss_pred             CCccceeEEeeccceeeeCCCCCCcccccccch-hhhhhhhh-hccCcCCCCEEEEEe
Q psy1413         269 DHGNLSRYYRHAADFCHKLPDHVSLEEGALLEP-LSVGVHAC-RRAGVTLGSKVLITG  324 (408)
Q Consensus       269 ~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G  324 (408)
                      .+|+|+||+.++++.++++|++++. +++.+++ ..|++..+ .+..++ ++++||+|
T Consensus        97 ~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          97 HFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             BCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             cCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            4699999999999999999999985 5666664 45666665 555665 99999975

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.54  E-value=4.6e-08  Score=81.57  Aligned_cols=109  Identities=17%  Similarity=0.170  Sum_probs=80.9

Q ss_pred             CCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC--------------------------------------
Q psy1413          87 DDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH--------------------------------------  126 (408)
Q Consensus        87 ~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~--------------------------------------  126 (408)
                      ..|++.+......+ +|++|+|.| +|++|.+++|+++..|+                                      
T Consensus        14 glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~   93 (182)
T d1v3va2          14 GLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKK   93 (182)
T ss_dssp             HHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHH
Confidence            33554443333444 488999988 57799999999998886                                      


Q ss_pred             ----cceeEEEccCchH--HHHhhccCCcEEEEEccC-------CCCcccCHHHHHhcCcEEEEeecCC-------CcHH
Q psy1413         127 ----EASGIVSKVGAKV--KHLKATRPGGCLVIVGAG-------SQDVKIPLVLTMTKEIDIRGVFRYA-------NDYP  186 (408)
Q Consensus       127 ----~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~-------~~~~~~~~~~~~~~~~~l~g~~~~~-------~~~~  186 (408)
                          .++.+++++|...  +.+++++++|+++.+|..       ..+..++...+++|++++.|++..+       +.++
T Consensus        94 ~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~~~~~~~~~~  173 (182)
T d1v3va2          94 ASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALR  173 (182)
T ss_dssp             HCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCCHHHHHHHHH
T ss_pred             hhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccChHHHHHHHH
Confidence                4677888887543  789999999999999942       2245677788999999999987543       2367


Q ss_pred             HHHHHHHcC
Q psy1413         187 IALAMVASG  195 (408)
Q Consensus       187 ~~~~l~~~g  195 (408)
                      ++++|+++|
T Consensus       174 ~l~~~i~~G  182 (182)
T d1v3va2         174 DLMKWVLEG  182 (182)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHhCc
Confidence            777888765

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.51  E-value=2.2e-07  Score=81.85  Aligned_cols=88  Identities=15%  Similarity=0.111  Sum_probs=71.4

Q ss_pred             CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-------HHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413         313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-------LKTAKEMGADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-------~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      .|+|+.+|||+|+ +++|+.+++.+...|+++|++++|++.+       .+.+++.|+...+...|..+.+++++.+.++
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            4899999999999 9999999999999999989999887432       2334557777666667777888888888877


Q ss_pred             hcCCCCceEEEcccch
Q psy1413         385 LQGEQPDKTIDCSGIE  400 (408)
Q Consensus       385 ~~~~~~d~i~d~~g~~  400 (408)
                      ....++|.+|++.|..
T Consensus        85 ~~~~~i~~vv~~ag~~  100 (259)
T d2fr1a1          85 GDDVPLSAVFHAAATL  100 (259)
T ss_dssp             CTTSCEEEEEECCCCC
T ss_pred             cccccccccccccccc
Confidence            6656789999998854

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.49  E-value=4.8e-08  Score=76.62  Aligned_cols=53  Identities=15%  Similarity=0.105  Sum_probs=44.5

Q ss_pred             CCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEE
Q psy1413         269 DHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLI  322 (408)
Q Consensus       269 ~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv  322 (408)
                      .+|+|++|+.++++.++++|+++++++++.+. ...|+|+++.... ..++++|+
T Consensus        77 ~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g-~~g~tvl~  130 (131)
T d1iz0a1          77 PQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG-HTGKVVVR  130 (131)
T ss_dssp             SSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT-CCBEEEEE
T ss_pred             ccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc-cCCCEEEE
Confidence            36899999999999999999999999999887 6778888884432 55788776

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=98.49  E-value=6.9e-09  Score=86.28  Aligned_cols=120  Identities=13%  Similarity=0.028  Sum_probs=85.2

Q ss_pred             ecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC-----------------------------
Q psy1413          77 FREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH-----------------------------  126 (408)
Q Consensus        77 ~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~-----------------------------  126 (408)
                      ++++++++....|++.+......+ +|++|+|+|+|++|..++++++.+|+                             
T Consensus         3 le~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~   82 (176)
T d2jhfa2           3 LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQD   82 (176)
T ss_dssp             HHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCC
Confidence            334566666666666443333334 58899999999999999988887664                             


Q ss_pred             ---------------cceeEEEccCchH---HHHhhccCCc-EEEEEccCCCCc-ccCHHHHHhcCcEEEEeecC----C
Q psy1413         127 ---------------EASGIVSKVGAKV---KHLKATRPGG-CLVIVGAGSQDV-KIPLVLTMTKEIDIRGVFRY----A  182 (408)
Q Consensus       127 ---------------~~~~vv~~~g~~~---~~~~~l~~gG-~iv~~G~~~~~~-~~~~~~~~~~~~~l~g~~~~----~  182 (408)
                                     .++.+++++|...   +++.+++++| +++..+.+.... ......++.+++++.|++..    +
T Consensus        83 ~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~~  162 (176)
T d2jhfa2          83 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSK  162 (176)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHH
T ss_pred             chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCCHH
Confidence                           3677888888764   5788898875 555555554433 33444677899999999743    2


Q ss_pred             CcHHHHHHHHHcCC
Q psy1413         183 NDYPIALAMVASGK  196 (408)
Q Consensus       183 ~~~~~~~~l~~~g~  196 (408)
                      ++++++++++++||
T Consensus       163 ~~~~~li~~~~~GK  176 (176)
T d2jhfa2         163 DSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHCcC
Confidence            57899999999886

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=98.48  E-value=9e-09  Score=85.43  Aligned_cols=118  Identities=13%  Similarity=0.030  Sum_probs=84.5

Q ss_pred             ccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC-------------------------------
Q psy1413          79 EQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH-------------------------------  126 (408)
Q Consensus        79 ~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~-------------------------------  126 (408)
                      ++++++....|++.+......+ .+++|+|+|+|++|..++++++..|.                               
T Consensus         5 ~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~   84 (175)
T d1cdoa2           5 TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHS   84 (175)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCS
T ss_pred             HHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcc
Confidence            4455555555655443333334 57889999999999888777665443                               


Q ss_pred             -------------cceeEEEccCchH---HHHhhccCCc-EEEEEccCCCCcccCHHHHHhcCcEEEEeecCC----CcH
Q psy1413         127 -------------EASGIVSKVGAKV---KHLKATRPGG-CLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA----NDY  185 (408)
Q Consensus       127 -------------~~~~vv~~~g~~~---~~~~~l~~gG-~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~----~~~  185 (408)
                                   .++.+++++|...   +++++++++| +++.+|.+.....++...++++++++.|++..+    +++
T Consensus        85 ~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~~~d~  164 (175)
T d1cdoa2          85 EPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGV  164 (175)
T ss_dssp             SCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGCCHHHHH
T ss_pred             hhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCCcHHHHH
Confidence                         3677888888754   5677777764 556666777777777778888999999987432    679


Q ss_pred             HHHHHHHHcCC
Q psy1413         186 PIALAMVASGK  196 (408)
Q Consensus       186 ~~~~~l~~~g~  196 (408)
                      +++++|+++||
T Consensus       165 ~~~i~l~~~gK  175 (175)
T d1cdoa2         165 PKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHTTS
T ss_pred             HHHHHHHHcCC
Confidence            99999999986

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=98.47  E-value=2.3e-09  Score=87.92  Aligned_cols=60  Identities=23%  Similarity=0.308  Sum_probs=47.0

Q ss_pred             CCccceeEEeeccceeeeCCCCCCcccccccchhh-hhhhhhhccCcCCCCEEEEEec-chh
Q psy1413         269 DHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLS-VGVHACRRAGVTLGSKVLITGA-GPI  328 (408)
Q Consensus       269 ~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~-~~~~~~~~~~~~~~~~~lv~G~-G~~  328 (408)
                      .+|+|+||..++++.++++|+++++++||.+++.. |+|..+........+++||.|+ |++
T Consensus        97 ~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~~~~~~~~Vli~ga~G~v  158 (162)
T d1tt7a1          97 RDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLEETPGALKDILQNRIQGRV  158 (162)
T ss_dssp             BCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEE
T ss_pred             cccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCcceE
Confidence            47999999999999999999999999999888544 5555554444555567788777 653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=98.47  E-value=6.7e-08  Score=81.39  Aligned_cols=115  Identities=17%  Similarity=0.124  Sum_probs=82.8

Q ss_pred             ccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC---------------------------------
Q psy1413          81 KPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH---------------------------------  126 (408)
Q Consensus        81 ~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~---------------------------------  126 (408)
                      +.+++++.+++.+. ...++ .|++|+|+|+|++|++++++++.+|+                                 
T Consensus         5 ~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~   83 (195)
T d1kola2           5 TCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLH   83 (195)
T ss_dssp             GGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHH
T ss_pred             HhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCcCHH
Confidence            34555555665432 22333 58999999999999999998887665                                 


Q ss_pred             ----------cceeEEEccCch------------------HHHHhhccCCcEEEEEccCCCC-------------cccCH
Q psy1413         127 ----------EASGIVSKVGAK------------------VKHLKATRPGGCLVIVGAGSQD-------------VKIPL  165 (408)
Q Consensus       127 ----------~~~~vv~~~g~~------------------~~~~~~l~~gG~iv~~G~~~~~-------------~~~~~  165 (408)
                                .++.+++++|..                  .+++++++++|+++.+|++..+             ..+++
T Consensus        84 ~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~~~~~  163 (195)
T d1kola2          84 EQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRF  163 (195)
T ss_dssp             HHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCH
T ss_pred             HHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCceeeeH
Confidence                      367788888732                  2689999999999999975432             24556


Q ss_pred             HHHHhcCcEEEEeecC-CCcHHHHHHHHHcCC
Q psy1413         166 VLTMTKEIDIRGVFRY-ANDYPIALAMVASGK  196 (408)
Q Consensus       166 ~~~~~~~~~l~g~~~~-~~~~~~~~~l~~~g~  196 (408)
                      ..++.|++++.+.... ...++++++++.++|
T Consensus       164 ~~~~~k~~~i~~g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         164 GLGWAKSHSFHTGQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             HHHHHTTCEEEESSCCHHHHHHHHHHHHHTTS
T ss_pred             HHHHhhcceeccCCCchHHHHHHHHHHHHcCC
Confidence            6778899998764433 256789999998765

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.46  E-value=4.3e-10  Score=93.70  Aligned_cols=67  Identities=13%  Similarity=0.030  Sum_probs=52.3

Q ss_pred             CCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhh--ccCcCCCCEEEEEe-c-chhHHHHHHH
Q psy1413         268 PDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACR--RAGVTLGSKVLITG-A-GPIGLVTLLT  335 (408)
Q Consensus       268 ~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~--~~~~~~~~~~lv~G-~-G~~G~~~~~~  335 (408)
                      ...|+|++|..++++.++++|++++.+.+++. ...|+++++.  ...+++++++||+| + |++|++++||
T Consensus       105 ~~~g~~aey~~v~~~~~~~iP~~~~~~~a~~~-~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         105 VNFGTWRTHALGNDDDFIKLPNPAQSKANGKP-NGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             SCCCCSBSEEEEEGGGEEEECCHHHHHHTTCS-CCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             cccccccceeeehhhhccCCCccchhhhhccc-hHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            45789999999999999999998875554443 3346677663  45789999999997 4 7899988764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.42  E-value=1.1e-07  Score=78.56  Aligned_cols=80  Identities=20%  Similarity=0.338  Sum_probs=66.2

Q ss_pred             CCeEEEEc-cCccccccccccccccC--------------------------------------cceeEEEccCchH--H
Q psy1413         102 GSDVHYLT-HGQIGDFRLSDPMIVGH--------------------------------------EASGIVSKVGAKV--K  140 (408)
Q Consensus       102 g~~vlv~g-~G~vG~~~i~~a~~~G~--------------------------------------~~~~vv~~~g~~~--~  140 (408)
                      +++++|.| +|++|.+++|++|.+|+                                      ..+++++.+|...  +
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~vi~~~~~~~~~~l~~~~~~~vvD~Vgg~~~~~  111 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAK  111 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEEEEGGGSSSCCSSCCCCEEEEEESSCHHHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccccccccHHHHHHHHhhcCCeeEEEcchHHHHH
Confidence            45888876 89999999999999987                                      2456777777543  7


Q ss_pred             HHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecC
Q psy1413         141 HLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRY  181 (408)
Q Consensus       141 ~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~  181 (408)
                      .+++++++|+++.+|... ...+++...+++|++++.|+...
T Consensus       112 ~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~~  153 (177)
T d1o89a2         112 VLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSV  153 (177)
T ss_dssp             HHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCSS
T ss_pred             HHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEecc
Confidence            899999999999999765 46788899999999999997543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=98.38  E-value=1.8e-07  Score=77.38  Aligned_cols=116  Identities=13%  Similarity=0.048  Sum_probs=80.3

Q ss_pred             ccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC-------------------------------
Q psy1413          79 EQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH-------------------------------  126 (408)
Q Consensus        79 ~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~-------------------------------  126 (408)
                      .++.++....|++.+......+ .+++|+|+|+|++|+.++|+++.+|+                               
T Consensus         6 ~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~   85 (176)
T d1d1ta2           6 KVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDST   85 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCS
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccc
Confidence            3444555555555333333333 48899999999999999999988775                               


Q ss_pred             -------------cceeEEEccCchH---HHHhhccC-CcEEEEEccCCCCcccCHH-HHHhcCcEEEEeecCC----Cc
Q psy1413         127 -------------EASGIVSKVGAKV---KHLKATRP-GGCLVIVGAGSQDVKIPLV-LTMTKEIDIRGVFRYA----ND  184 (408)
Q Consensus       127 -------------~~~~vv~~~g~~~---~~~~~l~~-gG~iv~~G~~~~~~~~~~~-~~~~~~~~l~g~~~~~----~~  184 (408)
                                   .++.+++.+|...   +++..+.+ +|+++.+|.+.....+++. .+++++.++.|++..+    ++
T Consensus        86 ~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~~~d  165 (176)
T d1d1ta2          86 KPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDD  165 (176)
T ss_dssp             SCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHHH
T ss_pred             hHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCCCcHHH
Confidence                         3666777877653   45666655 4999999988766554442 4556789999988542    67


Q ss_pred             HHHHHHHHHc
Q psy1413         185 YPIALAMVAS  194 (408)
Q Consensus       185 ~~~~~~l~~~  194 (408)
                      ++++++++.+
T Consensus       166 ip~li~~~~~  175 (176)
T d1d1ta2         166 VPKLVTEFLA  175 (176)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHhC
Confidence            8888887654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.31  E-value=1.9e-07  Score=78.05  Aligned_cols=114  Identities=14%  Similarity=0.130  Sum_probs=74.2

Q ss_pred             CCCCCCcceEEEEeeeeec-C--CeEEEEc-cCccccccccccccccC--------------------------------
Q psy1413          83 IEDPDDHEVLLEMHCVGIC-G--SDVHYLT-HGQIGDFRLSDPMIVGH--------------------------------  126 (408)
Q Consensus        83 lp~~~~~~~~~~~~~~~~~-g--~~vlv~g-~G~vG~~~i~~a~~~G~--------------------------------  126 (408)
                      ++.+..|++.+......+. +  ++|+|.| +|++|.+++|+|+.+|+                                
T Consensus         9 lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~   88 (187)
T d1vj1a2           9 IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGN   88 (187)
T ss_dssp             TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSC
T ss_pred             hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchh
Confidence            4444445553322222232 3  7899988 79999999999998886                                


Q ss_pred             -----------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC-----C--cccC---HHHHHhcCcEEEEeecCC-
Q psy1413         127 -----------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-----D--VKIP---LVLTMTKEIDIRGVFRYA-  182 (408)
Q Consensus       127 -----------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-----~--~~~~---~~~~~~~~~~l~g~~~~~-  182 (408)
                                 .++.+++++|...  .++++++++|+++.+|....     +  ..+.   ...+..|++++.|..... 
T Consensus        89 ~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~~g~~~~~~  168 (187)
T d1vj1a2          89 VAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNY  168 (187)
T ss_dssp             HHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEEEECCGGGC
T ss_pred             HHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEEEEeEecch
Confidence                       3667788887543  68999999999999995322     1  1111   224668999999865322 


Q ss_pred             -----CcHHHHHHHHHcCC
Q psy1413         183 -----NDYPIALAMVASGK  196 (408)
Q Consensus       183 -----~~~~~~~~l~~~g~  196 (408)
                           +.++++.+|+++||
T Consensus       169 ~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         169 KDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             GGGHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHCcC
Confidence                 33677778888775

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=98.30  E-value=1.2e-07  Score=80.16  Aligned_cols=162  Identities=24%  Similarity=0.348  Sum_probs=121.5

Q ss_pred             cceeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhc
Q psy1413          67 PILRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKAT  145 (408)
Q Consensus        67 ~~~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l  145 (408)
                      .++..+. .+.. ++.++|.+.+.++++.+.++++++.++.++-    |.....++..+|+|+.|+|..+|+..+.++. 
T Consensus        12 avl~~~~~~l~i-~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~----G~~~~~~P~i~GHE~~G~Vv~vG~~v~~~~v-   85 (198)
T d2jhfa1          12 AVLWEEKKPFSI-EEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRP-   85 (198)
T ss_dssp             EEBCSTTSCCEE-EEEEECCCCTTEEEEEEEEEECCHHHHHHHH----TSSCCCSSBCCCCSEEEEEEEECTTCCSCCT-
T ss_pred             EEEecCCCCCEE-EEEECCCCCCCEEEEEEEEEecccccceeec----CCcccccceecccceeEEEEecCccccCcCC-
Confidence            3444443 4777 7889999999999999999999998887753    2334567888999999999999986555555 


Q ss_pred             cCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCC
Q psy1413         146 RPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGN  225 (408)
Q Consensus       146 ~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~  225 (408)
                                                                                                      
T Consensus        86 --------------------------------------------------------------------------------   85 (198)
T d2jhfa1          86 --------------------------------------------------------------------------------   85 (198)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceEEEEEcCceeecCCCcccccccccCCccccccceeeccc--------------------CCCCccceeEEeeccceee
Q psy1413         226 AIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCAT--------------------PPDHGNLSRYYRHAADFCH  285 (408)
Q Consensus       226 ~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~~~~~~~~  285 (408)
                             +|+|++.+..+|+.|..|..+.+++|.+..+...                    ....|+|+||.++++..++
T Consensus        86 -------GdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~  158 (198)
T d2jhfa1          86 -------GDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVA  158 (198)
T ss_dssp             -------TCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEE
T ss_pred             -------CCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeE
Confidence                   9999999999999999999999999987644211                    1124899999999999999


Q ss_pred             eCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEE
Q psy1413         286 KLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLIT  323 (408)
Q Consensus       286 ~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~  323 (408)
                      ++|+.++++.++... +......  ....+++++++.|+
T Consensus       159 ~~p~~~~~e~l~~~~~~~~~v~~--g~~~l~~G~~VaVi  195 (198)
T d2jhfa1         159 KIDAAFALDPLITHVLPFEKINE--GFDLLRSGESIRTI  195 (198)
T ss_dssp             ECCTTSCCGGGEEEEEEGGGHHH--HHHHHHTTCCSEEE
T ss_pred             ECCCCCCHHHHHHHHHHHHhhhh--CCceeeCCCEEEEE
Confidence            999999876544322 1111111  11236778887775

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.19  E-value=1e-06  Score=70.17  Aligned_cols=63  Identities=17%  Similarity=0.182  Sum_probs=44.3

Q ss_pred             cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCc
Q psy1413          72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGA  137 (408)
Q Consensus        72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~  137 (408)
                      ++.+.. +..+.|.+.+.++++.+.+++++..+++... |.. ..........|.++.|++..++.
T Consensus        12 ~~~l~i-~~v~~p~~~~geVlVkV~a~gin~~D~~~~~-G~~-~~~~~~p~v~G~e~~G~V~~~~~   74 (146)
T d1o89a1          12 KTLASV-QTLDESRLPEGDVTVDVHWSSLNYKDALAIT-GKG-KIIRNFPMIPGIDFAGTVRTSED   74 (146)
T ss_dssp             -CEEEE-EECCGGGSCSCSEEEEEEEEECCHHHHHHHH-TCS-SCCCSSSBCCCSEEEEEEEEECS
T ss_pred             ceEEEE-EEcCCCCCCCCEEEEEEeeccCccceeeEEE-eec-ccccccceeccccccccceeecc
Confidence            334566 6778888889999999999999877765421 111 11234556789999999998774

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=5.6e-06  Score=72.12  Aligned_cols=84  Identities=21%  Similarity=0.215  Sum_probs=67.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|++++++.+.+..........|..+.+++++.+.++.. -.++|++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGAR-VVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4789999999 99999999999999997 9999999999887755444444445666778888888887754 2579999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      ++++|..
T Consensus        84 VnnAG~~   90 (250)
T d1ydea1          84 VNNAGHH   90 (250)
T ss_dssp             EECCCCC
T ss_pred             Eeccccc
Confidence            9999853

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.12  E-value=5.5e-06  Score=71.86  Aligned_cols=84  Identities=20%  Similarity=0.200  Sum_probs=67.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++++|++++++.+ ++++.....-.-|..+.+++++.++++.. ..++|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAK-VVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            5689999999 99999999999999997 99999999888765 55665444445666677888888877754 257999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +++++|..
T Consensus        84 linnAG~~   91 (244)
T d1nffa_          84 LVNNAGIL   91 (244)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccc
Confidence            99999864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.11  E-value=5.2e-06  Score=72.67  Aligned_cols=84  Identities=25%  Similarity=0.243  Sum_probs=69.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|+.++++.+ +++|.....-.-|..+.+++++.+.++.. ..++|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGAR-VAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEE-EEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            4688999999 99999999999999997 99999998887654 77887666556677778888888887754 258999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ++++.|..
T Consensus        83 lVnnAg~~   90 (256)
T d1k2wa_          83 LVNNAALF   90 (256)
T ss_dssp             EEECCCCC
T ss_pred             EEeecccc
Confidence            99999854

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.10  E-value=6.8e-06  Score=71.27  Aligned_cols=84  Identities=25%  Similarity=0.242  Sum_probs=67.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|++++++.+ ++++.....-.-|..+.+++++.+.++.. ..++|+
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~-Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAK-VIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            4788999999 99999999999999997 89999999887765 55665544444566677888888887754 357999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ++++.|..
T Consensus        82 lVnnAg~~   89 (243)
T d1q7ba_          82 LVNNAGIT   89 (243)
T ss_dssp             EEECCCCC
T ss_pred             ehhhhhhc
Confidence            99998754

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.1e-05  Score=69.90  Aligned_cols=84  Identities=26%  Similarity=0.324  Sum_probs=69.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .|+++||+|+ +|+|..++..+...|++ |++.+|+.++++.+    ++.|........|..+.+++++.++++.. .+.
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~-V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSK-LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999 99999999999999998 99999999887543    45666666666777788888888887754 457


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++++++|..
T Consensus        85 idilinnag~~   95 (244)
T d1yb1a_          85 VSILVNNAGVV   95 (244)
T ss_dssp             CSEEEECCCCC
T ss_pred             CceeEeecccc
Confidence            99999999965

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.08  E-value=6.6e-06  Score=71.81  Aligned_cols=84  Identities=20%  Similarity=0.234  Sum_probs=69.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +++|..+++.+...|++ |+++++++++++.+ ++++........|..+.+++++.+.++.. .+++|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAK-VAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            5688999999 99999999999999998 99999999887665 66887766666677777888888877754 357999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +++++|..
T Consensus        84 lVnnAG~~   91 (253)
T d1hxha_          84 LVNNAGIL   91 (253)
T ss_dssp             EEECCCCC
T ss_pred             EEeccccc
Confidence            99999864

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.07  E-value=7.1e-06  Score=71.62  Aligned_cols=84  Identities=25%  Similarity=0.279  Sum_probs=68.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++++|++++++.+ +++|.......-|..+.+++++.+.++.. ..++|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGAR-VVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            4689999999 99999999999999998 99999998887655 66776555555666777888888877654 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +++++|..
T Consensus        83 lVnnAg~~   90 (254)
T d1hdca_          83 LVNNAGIS   90 (254)
T ss_dssp             EEECCCCC
T ss_pred             EEecCccc
Confidence            99999864

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.07  E-value=9.5e-06  Score=70.24  Aligned_cols=84  Identities=25%  Similarity=0.287  Sum_probs=69.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +++|..+++-+...|++ |++++|+.++++.+ ++++.+...-..|..+.+++++.+.++.. .+++|+
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGAS-LVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            5789999999 99999999999999998 89999999887654 66787666556666778888888887754 257999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      .++++|..
T Consensus        83 LinnAg~~   90 (241)
T d2a4ka1          83 VAHFAGVA   90 (241)
T ss_dssp             EEEGGGGT
T ss_pred             eccccccc
Confidence            99998764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.04  E-value=1.4e-05  Score=69.84  Aligned_cols=84  Identities=20%  Similarity=0.215  Sum_probs=66.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc--CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ--GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~  388 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++.+|++++++.+    ++.|........|..+.+++++.+.++..  +.
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGAS-VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            5788999999 99999999999999997 99999998887543    34565555555666777888888877654  34


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|+++++.|..
T Consensus        86 ~idilvnnAG~~   97 (259)
T d2ae2a_          86 KLNILVNNAGIV   97 (259)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CceEEEECCcee
Confidence            699999999864

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.01  E-value=1.1e-05  Score=70.15  Aligned_cols=83  Identities=20%  Similarity=0.158  Sum_probs=67.5

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      -.++++||+|+ +++|+.+++.+...|++ |++.++++++++.+++.+...+  .-|..+.+++++.+.++.. ..++|+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~--~~Dv~~~~~v~~~~~~~~~~~G~iDi   79 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGAL-VALCDLRPEGKEVAEAIGGAFF--QVDLEDERERVRFVEEAAYALGRVDV   79 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSTTHHHHHHHHTCEEE--ECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHcCCeEE--EEeCCCHHHHHHHHHHHHHhcCCCCe
Confidence            35789999999 99999999999999997 9999999988888888876543  3455667788887777654 257999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +++++|..
T Consensus        80 LVnnAG~~   87 (248)
T d2d1ya1          80 LVNNAAIA   87 (248)
T ss_dssp             EEECCCCC
T ss_pred             EEEeCcCC
Confidence            99999854

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.01  E-value=1e-05  Score=71.63  Aligned_cols=83  Identities=25%  Similarity=0.284  Sum_probs=67.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++++|+.++++.+ +++|........|..+.+++++.+.++.. -.++|+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAK-VAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            4789999999 99999999999999997 99999999888665 56776655555666677778777777643 357999


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      ++++.|.
T Consensus        83 lvnnAG~   89 (276)
T d1bdba_          83 LIPNAGI   89 (276)
T ss_dssp             EECCCCC
T ss_pred             ccccccc
Confidence            9999985

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.99  E-value=1.7e-05  Score=69.44  Aligned_cols=84  Identities=26%  Similarity=0.358  Sum_probs=67.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++++|++++++.+    ++.|........|..+.+++++.+.++.. -.+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTA-IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999 99999999999999998 99999998877644    44566655556666777888888877654 257


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|+++++.|..
T Consensus        83 iDilVnnaG~~   93 (260)
T d1zema1          83 IDFLFNNAGYQ   93 (260)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCeehhhhccc
Confidence            99999999854

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.99  E-value=2.3e-05  Score=68.48  Aligned_cols=83  Identities=24%  Similarity=0.249  Sum_probs=66.7

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      ++..||+|+ +|+|+.+++.+...|++ |++++|++++++.    +++.|........|..+.+++++.+.++.. .+++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLR-VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            567799999 99999999999999998 9999999877654    345676666556677778888888887754 3579


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++++++|..
T Consensus        81 DilVnnAG~~   90 (257)
T d2rhca1          81 DVLVNNAGRP   90 (257)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEeccccc
Confidence            9999999864

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.99  E-value=1.7e-05  Score=69.01  Aligned_cols=84  Identities=19%  Similarity=0.260  Sum_probs=65.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++++|+.++++..     +++|.....-.-|..+.+++++.+.++.. .+
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCS-VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4688999999 99999999999999997 99999998775432     44576655545666677888887777654 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++++++|..
T Consensus        83 ~iDiLVnnAG~~   94 (251)
T d1vl8a_          83 KLDTVVNAAGIN   94 (251)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999864

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=1.3e-05  Score=69.31  Aligned_cols=80  Identities=23%  Similarity=0.195  Sum_probs=60.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|++++++.+ ++++....+ .-|..+.+++++.+.++   +++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~---g~iDil   78 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAK-VVAVTRTNSDLVSLAKECPGIEPV-CVDLGDWDATEKALGGI---GPVDLL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHSTTCEEE-ECCTTCHHHHHHHHTTC---CCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHhcCCCeEE-EEeCCCHHHHHHHHHHc---CCCeEE
Confidence            4789999999 99999999999999998 99999999887665 444433333 34555566666655443   579999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      ++++|..
T Consensus        79 VnnAg~~   85 (242)
T d1cyda_          79 VNNAALV   85 (242)
T ss_dssp             EECCCCC
T ss_pred             EECCccc
Confidence            9999854

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.3e-05  Score=69.39  Aligned_cols=80  Identities=24%  Similarity=0.243  Sum_probs=61.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|++++++.+ ++++....+. -|..+.+++++.+.+.   +++|++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~-V~~~~r~~~~l~~~~~~~~~~~~~~-~Dv~d~~~v~~~~~~~---g~iDil   80 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGAR-VVAVSRTQADLDSLVRECPGIEPVC-VDLGDWEATERALGSV---GPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHSTTCEEEE-CCTTCHHHHHHHHTTC---CCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCHHHHHHHHHhcCCCeEEE-EeCCCHHHHHHHHHHh---CCceEE
Confidence            6789999999 99999999999999997 99999999988766 4455333332 3445566666665443   479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      +++.|..
T Consensus        81 VnnAg~~   87 (244)
T d1pr9a_          81 VNNAAVA   87 (244)
T ss_dssp             EECCCCC
T ss_pred             Eeccccc
Confidence            9999864

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.98  E-value=2e-05  Score=68.91  Aligned_cols=85  Identities=20%  Similarity=0.218  Sum_probs=67.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc--CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ--GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~  388 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|++++++.    +++.+.......-|..+.+++++.+.++..  +.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~-V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGAR-VYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            6789999999 99999999999999997 9999999877654    455666665555666777888887777654  24


Q ss_pred             CCceEEEcccchh
Q psy1413         389 QPDKTIDCSGIES  401 (408)
Q Consensus       389 ~~d~i~d~~g~~~  401 (408)
                      .+|++++++|...
T Consensus        84 ~idilinnag~~~   96 (258)
T d1ae1a_          84 KLNILVNNAGVVI   96 (258)
T ss_dssp             CCCEEEECCCCCC
T ss_pred             CcEEEeccccccc
Confidence            6899999998653

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.97  E-value=1.2e-05  Score=70.09  Aligned_cols=84  Identities=26%  Similarity=0.231  Sum_probs=67.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|++++++.    +++.|.....-..|..+.+++++.+.++.. -++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999 99999999999999998 9999999877654    455676665556677777888887777654 257


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|++++++|..
T Consensus        89 iDilvnnAG~~   99 (255)
T d1fmca_          89 VDILVNNAGGG   99 (255)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEeeeCCcCC
Confidence            99999999864

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=1e-07  Score=79.16  Aligned_cols=120  Identities=15%  Similarity=0.135  Sum_probs=78.9

Q ss_pred             eecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC---------------------------
Q psy1413          76 RFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH---------------------------  126 (408)
Q Consensus        76 ~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~---------------------------  126 (408)
                      +|++++++|.+..+++.+......+ .+++|+|+| +|++|++++|+++.+|+                           
T Consensus         2 sfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~   81 (179)
T d1qora2           2 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYR   81 (179)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEECC
Confidence            5666677777766776444333333 488999986 56699999999998776                           


Q ss_pred             ---------------cceeEEEccCchH--HHHhhccCCcEEEEEccCC-CCcccCHHHHHhc-CcEEEEee-----cCC
Q psy1413         127 ---------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTK-EIDIRGVF-----RYA  182 (408)
Q Consensus       127 ---------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~-~~~l~g~~-----~~~  182 (408)
                                     .++.+++++|...  +++++++++|+++.+|... .+..++...+..+ ++.+.+..     ..+
T Consensus        82 ~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  161 (179)
T d1qora2          82 EEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTR  161 (179)
T ss_dssp             TSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSH
T ss_pred             CCCHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCccccchhhhhccceEEEEeeEEeeecCCH
Confidence                           2455667776543  6899999999999999655 4556666555444 34333221     111


Q ss_pred             C----cHHHHHHHHHcC
Q psy1413         183 N----DYPIALAMVASG  195 (408)
Q Consensus       183 ~----~~~~~~~l~~~g  195 (408)
                      +    .++++++|+++|
T Consensus       162 ~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         162 EELTEASNELFSLIASG  178 (179)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHCc
Confidence            2    245677777776

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.94  E-value=2.2e-05  Score=68.34  Aligned_cols=84  Identities=21%  Similarity=0.215  Sum_probs=67.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~  389 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|++++++.+    ++.|.......-|..+.+++++.+.++.. .++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~-V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSH-VICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSE-EEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4678899999 99999999999999997 99999998876543    44666655556677778888888888744 458


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|+++++.|..
T Consensus        88 iDilvnnag~~   98 (251)
T d2c07a1          88 VDILVNNAGIT   98 (251)
T ss_dssp             CCEEEECCCCC
T ss_pred             ceeeeeccccc
Confidence            99999998854

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.93  E-value=2.3e-05  Score=68.01  Aligned_cols=84  Identities=15%  Similarity=0.177  Sum_probs=66.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh--HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK--LKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~--~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++.++++.+  .+.++++|.....-..|..+.+++++.+.++.. ..++|
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~-V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGAD-IAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            4688999999 99999999999999997 8888887543  244577887666556677778888888887754 35799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      ++++++|..
T Consensus        83 ilVnnAG~~   91 (247)
T d2ew8a1          83 ILVNNAGIY   91 (247)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999864

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.91  E-value=2.8e-05  Score=68.33  Aligned_cols=84  Identities=21%  Similarity=0.241  Sum_probs=64.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|++++++.+ ++++.  ...+-..|..+.+++++.+.++.. ..++
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAK-VVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            5788999999 99999999999999998 99999999887765 44442  122223466677888888877654 3589


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++++++|..
T Consensus        84 D~lVnnAG~~   93 (268)
T d2bgka1          84 DIMFGNVGVL   93 (268)
T ss_dssp             CEEEECCCCC
T ss_pred             ceeccccccc
Confidence            9999999864

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2.3e-05  Score=68.33  Aligned_cols=84  Identities=15%  Similarity=0.140  Sum_probs=64.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc-----CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM-----GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|+.++++.+ +++     +........|..+.+++++.+.++.. .
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAK-VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            4688999999 99999999999999997 99999998887654 222     23344444566677888888877654 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      +++|++++++|..
T Consensus        81 G~iDilVnnAg~~   93 (254)
T d2gdza1          81 GRLDILVNNAGVN   93 (254)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCcCeeccccccc
Confidence            4799999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.91  E-value=2.3e-05  Score=68.52  Aligned_cols=85  Identities=20%  Similarity=0.168  Sum_probs=64.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc--CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ--GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~  388 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++++|++++++.+    ++.+........|..+.+++++.+.++..  +.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~-V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAV-IHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999 99999999999999997 99999998887544    33444444445566667777777777654  24


Q ss_pred             CCceEEEcccchh
Q psy1413         389 QPDKTIDCSGIES  401 (408)
Q Consensus       389 ~~d~i~d~~g~~~  401 (408)
                      .+|++++++|...
T Consensus        86 ~idilvnnAG~~~   98 (259)
T d1xq1a_          86 KLDILINNLGAIR   98 (259)
T ss_dssp             CCSEEEEECCC--
T ss_pred             CcccccccccccC
Confidence            6999999998653

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.91  E-value=2e-05  Score=69.03  Aligned_cols=85  Identities=19%  Similarity=0.239  Sum_probs=65.4

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hH----HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KL----KTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~----~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++++|+.+ ++    +++++.|.+...-..|..+.+++++.+.++.. .+
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAK-VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5688999999 99999999999999997 888888743 33    34456676655556666777888888777653 25


Q ss_pred             CCceEEEcccchh
Q psy1413         389 QPDKTIDCSGIES  401 (408)
Q Consensus       389 ~~d~i~d~~g~~~  401 (408)
                      ++|++++++|...
T Consensus        85 ~iDiLVnnAG~~~   97 (261)
T d1geea_          85 KLDVMINNAGLEN   97 (261)
T ss_dssp             CCCEEEECCCCCC
T ss_pred             CCCEeeccceecC
Confidence            7999999998653

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.91  E-value=2.9e-05  Score=67.06  Aligned_cols=82  Identities=30%  Similarity=0.325  Sum_probs=64.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++++|++++++.+ +++++..+  ..|..+.+++++.+.++.. -+++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~-V~~~~r~~~~l~~~~~~~~~~~~--~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGAR-LVACDIEEGPLREAAEAVGAHPV--VMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTTCEEE--ECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHcCCeEE--EEecCCHHHHHHHHHHHHHhcCCceE
Confidence            4689999999 99999999999999997 99999999988776 44555432  3455667778777777643 247999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +++++|..
T Consensus        81 lVnnAG~~   88 (242)
T d1ulsa_          81 VVHYAGIT   88 (242)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccc
Confidence            99999864

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.90  E-value=3.7e-05  Score=66.97  Aligned_cols=81  Identities=20%  Similarity=0.217  Sum_probs=65.0

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .+||+|+ +|+|+.+++.+...|++ |++++|++++++.+    ++.|.......-|..+.+++++.+.++.. .+++|+
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFA-VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            4689999 99999999999999997 99999998886543    45676655555677778888888888754 357999


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      +++++|..
T Consensus        82 lVnnAG~~   89 (255)
T d1gega_          82 IVNNAGVA   89 (255)
T ss_dssp             EEECCCCC
T ss_pred             EEeccccc
Confidence            99999864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.89  E-value=2e-05  Score=68.94  Aligned_cols=84  Identities=18%  Similarity=0.210  Sum_probs=66.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH-----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT-----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~-----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++++|+.++++.     .+++|.....-.-|..+.+++++.+.++.. .+
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGAN-VAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEE-EEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4688999999 99999999999999997 9999998776543     244676665556667778888888887754 35


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|+++++.|..
T Consensus        87 ~iDilVnnAg~~   98 (260)
T d1h5qa_          87 PISGLIANAGVS   98 (260)
T ss_dssp             SEEEEEECCCCC
T ss_pred             CCcEeccccccc
Confidence            799999999854

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=3.2e-05  Score=68.97  Aligned_cols=86  Identities=22%  Similarity=0.253  Sum_probs=66.4

Q ss_pred             cCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc--------CCCeEEecCCCCChHHHHHHHHH
Q psy1413         314 VTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM--------GADATVLIDRNHSLEEISTHIIE  383 (408)
Q Consensus       314 ~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~--------ga~~~i~~~~~~~~~~~~~~~~~  383 (408)
                      .-.++++||+|+ +++|+.+++.+...|++ |++++|+.++++.+ +++        +...+....|..+.+++++.+.+
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~-Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSN-VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            346789999999 99999999999999997 99999998876543 222        34444445666777888888877


Q ss_pred             Hhc-CCCCceEEEcccch
Q psy1413         384 LLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       384 ~~~-~~~~d~i~d~~g~~  400 (408)
                      +.. .+++|++++++|..
T Consensus        88 ~~~~~G~iDiLVnnAg~~  105 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQ  105 (297)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHhCCeEEEEeecccc
Confidence            654 35799999998854

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.87  E-value=3.6e-05  Score=67.14  Aligned_cols=84  Identities=21%  Similarity=0.267  Sum_probs=64.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHc--CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEM--GADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~--ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|+.++++..    .+.  +........|..+.+++++.+.++.. .
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~-V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAK-LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            4688999999 99999999999999997 99999998886543    222  33444444566677888877777654 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      +++|++++++|..
T Consensus        82 G~iDiLVnnAG~~   94 (258)
T d1iy8a_          82 GRIDGFFNNAGIE   94 (258)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCccc
Confidence            5799999999854

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=3.6e-05  Score=67.13  Aligned_cols=84  Identities=20%  Similarity=0.165  Sum_probs=64.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcC--CCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMG--ADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +++|+++++.+...|++ |++++|+.++++.+    ++.+  ...+.-..|..+.+++++.+.++.. .
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLK-VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4689999999 99999999999999997 99999998887653    3334  2333334566677888888777754 3


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      +++|++++++|..
T Consensus        88 g~iD~lVnnAg~~  100 (257)
T d1xg5a_          88 SGVDICINNAGLA  100 (257)
T ss_dssp             CCCSEEEECCCCC
T ss_pred             CCCCEEEeccccc
Confidence            5799999999864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.87  E-value=4.3e-05  Score=68.01  Aligned_cols=84  Identities=20%  Similarity=0.272  Sum_probs=65.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|+.++++.+     ++.|........|..+.+++++.+..+.. ..
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~-Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQ-CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            4689999999 99999999999999997 99999998776432     33565555555566677777777766543 46


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|+++++.|..
T Consensus       103 ~iDilvnnAg~~  114 (294)
T d1w6ua_         103 HPNIVINNAAGN  114 (294)
T ss_dssp             SCSEEEECCCCC
T ss_pred             ccchhhhhhhhc
Confidence            899999999854

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.86  E-value=3.1e-05  Score=67.33  Aligned_cols=84  Identities=20%  Similarity=0.168  Sum_probs=64.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC--CCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG--ADATVLIDRNHSLEEISTHIIELLQ-GEQP  390 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~  390 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|+.++++.+ ++++  -....-..|..+.+++++.+.++.. .+++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAK-VMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            4789999999 99999999999999998 99999998887765 3443  2333334566667777777777644 2589


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++++++|..
T Consensus        84 DiLVnnAg~~   93 (251)
T d1zk4a1          84 STLVNNAGIA   93 (251)
T ss_dssp             CEEEECCCCC
T ss_pred             eEEEeccccc
Confidence            9999999864

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.85  E-value=2.5e-05  Score=67.87  Aligned_cols=84  Identities=18%  Similarity=0.127  Sum_probs=62.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCC-eEEEEecChhhHHHHHHcC-CCeEEecCCCCChHHHHHHHHHHh---cCCCC
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGAS-RVVITDILEHKLKTAKEMG-ADATVLIDRNHSLEEISTHIIELL---QGEQP  390 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~-~vv~~~~~~~~~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~~~---~~~~~  390 (408)
                      .+++||+|+ +|+|+.+++.+...|+. +|++.+|+.++++.+++.. ....+..-|..+.+++++.+.++.   +..++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            378999999 99999999999889984 6888899999988876643 443444445556666665555543   34469


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++++++|..
T Consensus        83 dilinnAG~~   92 (250)
T d1yo6a1          83 SLLINNAGVL   92 (250)
T ss_dssp             CEEEECCCCC
T ss_pred             EEEEEcCccc
Confidence            9999999964

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.85  E-value=2.5e-05  Score=63.37  Aligned_cols=74  Identities=12%  Similarity=0.139  Sum_probs=57.3

Q ss_pred             hhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       308 ~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      .+.+..+.++.+++|+|+||.+.+++..++.+|+++|.++.|+.+|.+.+.+ ++.. .++...                
T Consensus         8 ~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~-~~~~~~----------------   70 (167)
T d1npya1           8 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YINSLE----------------   70 (167)
T ss_dssp             HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EESCCT----------------
T ss_pred             HHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhh-hhhccc----------------
Confidence            3456667778899999999999999999999999999999999998877644 5443 232211                


Q ss_pred             CCCCceEEEccc
Q psy1413         387 GEQPDKTIDCSG  398 (408)
Q Consensus       387 ~~~~d~i~d~~g  398 (408)
                      ...+|+|+||+.
T Consensus        71 ~~~~DliINaTp   82 (167)
T d1npya1          71 NQQADILVNVTS   82 (167)
T ss_dssp             TCCCSEEEECSS
T ss_pred             ccchhhheeccc
Confidence            246899999886

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.82  E-value=3e-05  Score=68.28  Aligned_cols=84  Identities=21%  Similarity=0.247  Sum_probs=64.2

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCC---CeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGA---DATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga---~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|++++++.+    ++.+.   .......|..+.+++++.+.++.. 
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~-V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGAN-VTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4688999999 99999999999999997 99999998887654    23332   233344555667888887777654 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      .+++|++++++|..
T Consensus        83 ~g~iDilvnnAG~~   96 (272)
T d1xkqa_          83 FGKIDVLVNNAGAA   96 (272)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             hCCceEEEeCCccc
Confidence            25799999999864

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.81  E-value=1.5e-05  Score=66.27  Aligned_cols=75  Identities=16%  Similarity=0.210  Sum_probs=55.1

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-c----C-CCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-M----G-ADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~----g-a~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      -.++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+ +    . .....|..+   .+++++.+      
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~------   90 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD---DASRAEAV------   90 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS---HHHHHHHT------
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhccc-hhhcccchHHHHHHHHHHHhccchhhhhhhccc---HHHHHHHh------
Confidence            36789999998 99999999999999997 9999999888765422 2    2 233344333   34444433      


Q ss_pred             CCCceEEEcccc
Q psy1413         388 EQPDKTIDCSGI  399 (408)
Q Consensus       388 ~~~d~i~d~~g~  399 (408)
                      +++|++|+++|.
T Consensus        91 ~~iDilin~Ag~  102 (191)
T d1luaa1          91 KGAHFVFTAGAI  102 (191)
T ss_dssp             TTCSEEEECCCT
T ss_pred             cCcCeeeecCcc
Confidence            468999999884

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.74  E-value=5.5e-05  Score=66.04  Aligned_cols=84  Identities=18%  Similarity=0.220  Sum_probs=64.7

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHHHH-----HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLKTA-----KEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~~~-----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|++ ++++.+     ++.|........|..+.+++++.+.++.. .
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~-V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGAD-IVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5788999999 99999999999999997 99898874 444332     33566666656677777888888877654 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++++++|..
T Consensus        82 G~iDiLVnnAG~~   94 (260)
T d1x1ta1          82 GRIDILVNNAGIQ   94 (260)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCcEEEeecccc
Confidence            5799999999864

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.73  E-value=4.7e-05  Score=61.07  Aligned_cols=74  Identities=19%  Similarity=0.364  Sum_probs=58.3

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHH-HHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLK-TAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      -.+.++||+|+|.+|..+++.+...|++++.++.|+.+|.+ .++++|.. ++++      +++.+.+.      .+|+|
T Consensus        22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~------~~~~~~l~------~~Div   88 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF------DELVDHLA------RSDVV   88 (159)
T ss_dssp             CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG------GGHHHHHH------TCSEE
T ss_pred             cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc------hhHHHHhc------cCCEE
Confidence            46789999999999999999999999999999999988875 45777743 3333      44544442      68999


Q ss_pred             EEcccchh
Q psy1413         394 IDCSGIES  401 (408)
Q Consensus       394 ~d~~g~~~  401 (408)
                      |.|++.+.
T Consensus        89 i~atss~~   96 (159)
T d1gpja2          89 VSATAAPH   96 (159)
T ss_dssp             EECCSSSS
T ss_pred             EEecCCCC
Confidence            99998764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.73  E-value=5.1e-05  Score=66.41  Aligned_cols=84  Identities=19%  Similarity=0.192  Sum_probs=62.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCC---CeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGA---DATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga---~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|++++++.+    ++.|.   ......-|..+.+++++.+.++.. 
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAK-VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5688999999 99999999999999997 99999998887654    33332   233334556667888887777654 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      ..++|++++++|..
T Consensus        83 ~g~iDilvnnAG~~   96 (264)
T d1spxa_          83 FGKLDILVNNAGAA   96 (264)
T ss_dssp             HSCCCEEEECCC--
T ss_pred             hCCCCEeecccccc
Confidence            35899999999864

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.72  E-value=5.4e-05  Score=66.65  Aligned_cols=84  Identities=23%  Similarity=0.261  Sum_probs=63.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCC--C-eEEecCCCCChHHHHHHHHHHhc-
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGA--D-ATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga--~-~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++++|++++++.+    ++.|.  . ......|..+.+++++.+.++.. 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQ-VTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4788999999 99999999999999997 99999998887654    33442  2 23334555667777777777653 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      .+++|+++++.|..
T Consensus        82 ~G~iDilVnnAG~~   95 (274)
T d1xhla_          82 FGKIDILVNNAGAN   95 (274)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCceEEEeecccc
Confidence            24799999998853

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.70  E-value=7.5e-05  Score=65.61  Aligned_cols=84  Identities=23%  Similarity=0.245  Sum_probs=66.1

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      .++++||+|+ +++|..+++.+...|++ |++.+++ +++++    .+++.|.+......|..+.+++.+.+.++.. ..
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~-Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCK-VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4789999999 99999999999999998 7777766 34333    3456777777767777788888888887754 35


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|+++++.|..
T Consensus        96 ~idilV~nag~~  107 (272)
T d1g0oa_          96 KLDIVCSNSGVV  107 (272)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCccccccccc
Confidence            799999998854

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.63  E-value=9.2e-05  Score=64.33  Aligned_cols=84  Identities=15%  Similarity=0.067  Sum_probs=56.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH---H-cC-CCeEEecCCCC-ChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK---E-MG-ADATVLIDRNH-SLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~---~-~g-a~~~i~~~~~~-~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ +|+|..+++.+...|++ +++++|+.++.+.++   + .+ ....+...+.. +.+++++.+.++.. .
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~-vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLK-NFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCS-EEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            4789999999 99999999999999999 666666655544332   2 23 23333333333 34556665655543 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      +++|++++++|..
T Consensus        83 g~iDilvnnAG~~   95 (254)
T d1sbya1          83 KTVDILINGAGIL   95 (254)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEeCCCCC
Confidence            4799999999853

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.61  E-value=8.5e-05  Score=64.74  Aligned_cols=85  Identities=24%  Similarity=0.216  Sum_probs=64.1

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe-cChhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITD-ILEHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~-~~~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      -.++++||+|+ +++|..+++.+...|++ |++.. +++++.+    ++++.|.+......|..+.+++++.+.++.. .
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~-Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGAS-VVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            35789999999 99999999999999999 66554 4544433    3456777766666666777888887777643 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|++++++|..
T Consensus        83 g~idilinnag~~   95 (259)
T d1ja9a_          83 GGLDFVMSNSGME   95 (259)
T ss_dssp             SCEEEEECCCCCC
T ss_pred             CCCcEEEeccccc
Confidence            4799999999865

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=0.00011  Score=64.48  Aligned_cols=83  Identities=24%  Similarity=0.202  Sum_probs=60.5

Q ss_pred             CCEE-EEEec-chhHHHHHHHHHHh-CCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413         317 GSKV-LITGA-GPIGLVTLLTARAL-GASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE  388 (408)
Q Consensus       317 ~~~~-lv~G~-G~~G~~~~~~~~~~-Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~  388 (408)
                      +.+| ||+|+ +|+|+.+++.+... |++ |++.+|+.++++.+    ++.|....+...|..+.+++++.+.++.. .+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGD-VVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSE-EEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            4445 78899 99999999876655 665 99999998887543    44465555555666777777777766643 24


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      ++|++|++.|..
T Consensus        81 ~iDiLVnNAGi~   92 (275)
T d1wmaa1          81 GLDVLVNNAGIA   92 (275)
T ss_dssp             SEEEEEECCCCC
T ss_pred             CcEEEEEcCCcC
Confidence            799999999964

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=0.00016  Score=63.29  Aligned_cols=86  Identities=21%  Similarity=0.152  Sum_probs=62.0

Q ss_pred             cCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-----HcCCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         314 VTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-----EMGADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       314 ~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .-.++++||+|+ +|+|+.+++.+...|++ |++++|++++++.+.     ..+........+..+.++....+..... 
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~-Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAH-VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            356799999999 99999999999999997 999999998876542     2344444444444445555555554432 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      .+..|+++++.|..
T Consensus        90 ~g~~~~li~nag~~  103 (269)
T d1xu9a_          90 MGGLDMLILNHITN  103 (269)
T ss_dssp             HTSCSEEEECCCCC
T ss_pred             hCCccccccccccc
Confidence            34789999988754

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.55  E-value=0.00015  Score=62.88  Aligned_cols=83  Identities=17%  Similarity=0.203  Sum_probs=60.5

Q ss_pred             CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      .++++||+|+ |  |+|+.+++.+...|++ |++.+++++..+.+    ++.+.... -..|..+.+++++.+.++.. .
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~-V~i~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAE-VALSYQAERLRPEAEKLAEALGGALL-FRADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHHTTCCEE-EECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEeCcHHHHHHHHHhhhccCcccc-cccccCCHHHHHHHHHHHHHhc
Confidence            5688999998 6  8999999999999998 88888887655443    22333333 34555667777777766543 2


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|+.+++.|..
T Consensus        85 g~iDilVnnag~~   97 (256)
T d1ulua_          85 GGLDYLVHAIAFA   97 (256)
T ss_dssp             SSEEEEEECCCCC
T ss_pred             CCceEEEeccccc
Confidence            4799999999864

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.52  E-value=0.00031  Score=60.27  Aligned_cols=82  Identities=17%  Similarity=0.228  Sum_probs=63.7

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCC------eEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGAS------RVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~------~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      .+||+|+ +|+|+.+++.+...|++      .|++.+|+.++++.+    ++.|.....-..|..+.+++++.+.++.. 
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4688999 99999999999999997      488889998877644    34565555555667777888888877654 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      .+++|+++++.|..
T Consensus        83 ~g~iDilvnnAg~~   96 (240)
T d2bd0a1          83 YGHIDCLVNNAGVG   96 (240)
T ss_dssp             TSCCSEEEECCCCC
T ss_pred             cCCcceeecccccc
Confidence            35899999999864

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=0.00014  Score=62.71  Aligned_cols=81  Identities=23%  Similarity=0.233  Sum_probs=57.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|++++++.+.+...... +..+... ++..+...+.  -.++|.++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~-Vi~~~r~~~~l~~~~~~~~~~~-~~~d~~~-~~~~~~~~~~--~~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAK-VIATDINESKLQELEKYPGIQT-RVLDVTK-KKQIDQFANE--VERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHGGGGGSTTEEE-EECCTTC-HHHHHHHHHH--CSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhccCCce-eeeeccc-cccccccccc--cccceeEE
Confidence            5688999999 99999999999999997 9999999998887755432222 2223223 3344443333  24799999


Q ss_pred             Ecccchh
Q psy1413         395 DCSGIES  401 (408)
Q Consensus       395 d~~g~~~  401 (408)
                      ++.|...
T Consensus        80 n~ag~~~   86 (245)
T d2ag5a1          80 NVAGFVH   86 (245)
T ss_dssp             ECCCCCC
T ss_pred             ecccccC
Confidence            9988653

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.42  E-value=7.8e-05  Score=64.72  Aligned_cols=80  Identities=13%  Similarity=0.074  Sum_probs=55.9

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCC-eEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGAD-ATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~-~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      .|.||+|+ +++|+.+++.+...|++ |++.+|+.++++++++.+.. ...|..+..+.+++.+.+.+..  .++|++++
T Consensus         1 ~TAlVTGas~GiG~aiA~~la~~Ga~-V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~--G~iDiLVn   77 (252)
T d1zmta1           1 STAIVTNVKHFGGMGSALRLSEAGHT-VACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY--GQVDVLVS   77 (252)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCE-EEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH--SCCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHc--CCCCEEEE
Confidence            47899999 99999999999999997 99999998888776554311 1122223333444444444443  47999999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      +.|..
T Consensus        78 NAg~~   82 (252)
T d1zmta1          78 NDIFA   82 (252)
T ss_dssp             ECCCC
T ss_pred             CCcCC
Confidence            88753

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.41  E-value=0.00036  Score=60.01  Aligned_cols=81  Identities=17%  Similarity=0.233  Sum_probs=60.8

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD  391 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d  391 (408)
                      .+||+|+ +++|+.+++.+...|++ |++. .+++++++.    ++++|.....-..|..+.+++++.+.++.. .+++|
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~-V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCK-VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5788899 99999999999999998 6665 455555443    355676555555666777888888887654 35799


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +++++.|..
T Consensus        82 iLVnnAg~~   90 (244)
T d1edoa_          82 VVVNNAGIT   90 (244)
T ss_dssp             EEEECCCCC
T ss_pred             ccccccccc
Confidence            999998854

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.39  E-value=0.0002  Score=61.77  Aligned_cols=82  Identities=13%  Similarity=0.169  Sum_probs=57.2

Q ss_pred             CEEEEEec-chhHHHHHHHHHH---hCCCeEEEEecChhhHHHHHH---cCCCeEEecCCCCChHHHHHHHHHH---hcC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARA---LGASRVVITDILEHKLKTAKE---MGADATVLIDRNHSLEEISTHIIEL---LQG  387 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~---~Ga~~vv~~~~~~~~~~~~~~---~ga~~~i~~~~~~~~~~~~~~~~~~---~~~  387 (408)
                      +++||+|+ +|+|+.+++.+..   .|++ |++.+|++++++.+++   .+....+-.-|..+.+++++.+.++   ...
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQH-LFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSE-EEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCE-EEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            57999999 9999999986653   4665 9999999887665433   3344444444555556666665543   345


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                      .++|+++++.|..
T Consensus        82 ~~iDiLvnNAg~~   94 (248)
T d1snya_          82 QGLNVLFNNAGIA   94 (248)
T ss_dssp             GCCSEEEECCCCC
T ss_pred             CCcceEEeecccc
Confidence            6899999998853

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.39  E-value=0.0003  Score=55.99  Aligned_cols=74  Identities=28%  Similarity=0.321  Sum_probs=55.1

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC-CCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMG-ADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      ..+++|+|+|-.|+.+++.++.+|+. |.++|.+.++++++++.. ........+   .+.+++.++      ..|+||.
T Consensus        32 pa~V~ViGaGvaG~~A~~~A~~lGA~-V~~~D~~~~~l~~l~~~~~~~~~~~~~~---~~~l~~~~~------~aDivI~  101 (168)
T d1pjca1          32 PGKVVILGGGVVGTEAAKMAVGLGAQ-VQIFDINVERLSYLETLFGSRVELLYSN---SAEIETAVA------EADLLIG  101 (168)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHGGGSEEEECC---HHHHHHHHH------TCSEEEE
T ss_pred             CcEEEEECCChHHHHHHHHHhhCCCE-EEEEeCcHHHHHHHHHhhcccceeehhh---hhhHHHhhc------cCcEEEE
Confidence            37899999999999999999999998 999999999999887754 222222222   245555443      5799999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      ++=.+
T Consensus       102 aalip  106 (168)
T d1pjca1         102 AVLVP  106 (168)
T ss_dssp             CCCCT
T ss_pred             eeecC
Confidence            87543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.31  E-value=0.00018  Score=61.69  Aligned_cols=77  Identities=17%  Similarity=0.149  Sum_probs=58.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i  393 (408)
                      .++++||+|+ +++|+.+++.+...|++ |++++|+.++.+.+       ..-..|..+.+++++.+.++.. .+++|++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~-V~~~~r~~~~~~~~-------~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL   77 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHK-VAVTHRGSGAPKGL-------FGVEVDVTDSDAVDRAFTAVEEHQGPVEVL   77 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSSCCCTTS-------EEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCcchhcCc-------eEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            4689999999 99999999999999998 99999987665432       1122344556777777766654 2479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      ++++|..
T Consensus        78 VnnAG~~   84 (237)
T d1uzma1          78 VSNAGLS   84 (237)
T ss_dssp             EEECSCC
T ss_pred             Eeeeccc
Confidence            9999864

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.31  E-value=0.00048  Score=60.16  Aligned_cols=87  Identities=15%  Similarity=0.050  Sum_probs=60.8

Q ss_pred             CCCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChhhH---HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413         315 TLGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEHKL---KTAKEMGADATVLIDRNHSLEEISTHIIELLQ-G  387 (408)
Q Consensus       315 ~~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~~~---~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~  387 (408)
                      -.++++||+|+ |  |+|..+++.+...|++ |++++|+++..   +.+.+.+....+...+..+..+..+.+.+... -
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~-V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGAT-LAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            35889999997 6  7999999999999998 88999886433   33333343333334444556676666666543 3


Q ss_pred             CCCceEEEcccchhh
Q psy1413         388 EQPDKTIDCSGIEST  402 (408)
Q Consensus       388 ~~~d~i~d~~g~~~~  402 (408)
                      ..+|+++++.|....
T Consensus        82 g~id~lV~nag~~~~   96 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPK   96 (274)
T ss_dssp             SCEEEEEECCCCCCG
T ss_pred             CCCCeEEeecccccc
Confidence            578999999886543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.29  E-value=0.00046  Score=61.33  Aligned_cols=81  Identities=27%  Similarity=0.308  Sum_probs=56.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC---------hhhHHH----HHHcCCCeEEecCCCCChHHHHHHH
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL---------EHKLKT----AKEMGADATVLIDRNHSLEEISTHI  381 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~---------~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~  381 (408)
                      .++++||+|+ +|+|+.+++.+...|++ |++.+++         .++++.    ....+.....+..+   .++.++.+
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~-Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~v   81 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGAL-VVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS---VEAGEKLV   81 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC---GGGHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch---HHHHHHHH
Confidence            4788999999 99999999999999997 8887654         223322    23345555566555   34555555


Q ss_pred             HHHhc-CCCCceEEEcccch
Q psy1413         382 IELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       382 ~~~~~-~~~~d~i~d~~g~~  400 (408)
                      +++.. .+++|++++++|..
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~  101 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGIL  101 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCccC
Confidence            55432 35799999999864

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.00064  Score=58.44  Aligned_cols=82  Identities=23%  Similarity=0.307  Sum_probs=58.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK  392 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~  392 (408)
                      .++++||+|+ +|+|..+++.+...|++ |++++|+.++++.+ ++++........+..+.++.++...++.. ....|.
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGAS-AVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence            5788999999 99999999999999997 99999998887654 66776555444444455555555554432 235677


Q ss_pred             EEEccc
Q psy1413         393 TIDCSG  398 (408)
Q Consensus       393 i~d~~g  398 (408)
                      .++..+
T Consensus        83 ~~~~~~   88 (248)
T d2o23a1          83 AVNCAG   88 (248)
T ss_dssp             EEECCC
T ss_pred             cccccc
Confidence            666544

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.23  E-value=0.00056  Score=58.36  Aligned_cols=74  Identities=23%  Similarity=0.161  Sum_probs=52.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      .++++||+|+ +++|..+++.+...|++ |++++|++++++   +.+...+.  .|..  +++.+.+ +..  +.+|+++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~-V~~~~r~~~~l~---~~~~~~~~--~Dv~--~~~~~~~-~~~--g~iD~lV   71 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAE-VTICARNEELLK---RSGHRYVV--CDLR--KDLDLLF-EKV--KEVDILV   71 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEESCHHHHH---HTCSEEEE--CCTT--TCHHHHH-HHS--CCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHH---hcCCcEEE--cchH--HHHHHHH-HHh--CCCcEEE
Confidence            4689999999 99999999999999997 999999876554   44433322  2211  2233333 322  4799999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      +++|..
T Consensus        72 nnAG~~   77 (234)
T d1o5ia_          72 LNAGGP   77 (234)
T ss_dssp             ECCCCC
T ss_pred             eccccc
Confidence            999864

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.22  E-value=0.00055  Score=55.25  Aligned_cols=48  Identities=31%  Similarity=0.495  Sum_probs=43.5

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeE
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT  365 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~  365 (408)
                      ...++|+|+|-.|+.+++.|+.+||+ |.++|.+.++++++++++...+
T Consensus        29 pa~VvViGaGvaG~~Aa~~A~~lGA~-V~v~D~~~~~~~~l~~l~~~~i   76 (183)
T d1l7da1          29 PARVLVFGVGVAGLQAIATAKRLGAV-VMATDVRAATKEQVESLGGKFI   76 (183)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCSTTHHHHHHTTCEEC
T ss_pred             CcEEEEEcCcHHHHHHHHHHHHcCCE-EEEEeccHHHHHHHHHhhcceE
Confidence            36799999999999999999999997 9999999999999999886544

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.10  E-value=0.00076  Score=58.39  Aligned_cols=83  Identities=14%  Similarity=0.118  Sum_probs=57.8

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHH---hCCCeEEEEecChhhHHHHH-Hc-----CCCeEEecCCCCChHHHHHHHHHHh
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARA---LGASRVVITDILEHKLKTAK-EM-----GADATVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~---~Ga~~vv~~~~~~~~~~~~~-~~-----ga~~~i~~~~~~~~~~~~~~~~~~~  385 (408)
                      .++.+||+|+ +|+|+.+++.+..   .|++ |++++|++++++.+. ++     +.....-.-|..+.+++++.+..+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSV-MLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCE-EEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCE-EEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            3567788899 9999999987653   5886 999999998876542 22     2333444456666777777776653


Q ss_pred             c-----CCCCceEEEcccc
Q psy1413         386 Q-----GEQPDKTIDCSGI  399 (408)
Q Consensus       386 ~-----~~~~d~i~d~~g~  399 (408)
                      .     +...|+++++.|.
T Consensus        84 ~~~~~~~~~~~~lvnnag~  102 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCC
T ss_pred             HhhhhccCceEEEEecccc
Confidence            2     2356788888774

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.06  E-value=8e-05  Score=63.93  Aligned_cols=77  Identities=18%  Similarity=0.271  Sum_probs=51.5

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCCh---HHHHHHHHHHhcCCCCc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSL---EEISTHIIELLQGEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~---~~~~~~~~~~~~~~~~d  391 (408)
                      .++++||+|+ +++|+.+++.+...|++ |+++++++.+..      ....+...+..+.   +.+.+.+.+.....++|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~-V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWW-VASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCE-EEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence            3689999999 99999999999999997 888887654321      1111111111112   33344444445456799


Q ss_pred             eEEEcccc
Q psy1413         392 KTIDCSGI  399 (408)
Q Consensus       392 ~i~d~~g~  399 (408)
                      ++++++|+
T Consensus        74 ~lInnAG~   81 (236)
T d1dhra_          74 AILCVAGG   81 (236)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999985

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00046  Score=57.48  Aligned_cols=74  Identities=24%  Similarity=0.273  Sum_probs=52.9

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ++++|+|+ |.+|..+++.+...|.+ |.+++|+.++++.....++.. + .-|..+.+++.+.+      +++|.||++
T Consensus         4 kkIlV~GatG~iG~~v~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~-~-~gD~~d~~~l~~al------~~~d~vi~~   74 (205)
T d1hdoa_           4 KKIAIFGATGQTGLTTLAQAVQAGYE-VTVLVRDSSRLPSEGPRPAHV-V-VGDVLQAADVDKTV------AGQDAVIVL   74 (205)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCGGGSCSSSCCCSEE-E-ESCTTSHHHHHHHH------TTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCE-EEEEEcChhhccccccccccc-c-cccccchhhHHHHh------cCCCEEEEE
Confidence            67999999 99999999999999986 999999988866544444433 2 23333344443332      368999999


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +|..
T Consensus        75 ~g~~   78 (205)
T d1hdoa_          75 LGTR   78 (205)
T ss_dssp             CCCT
T ss_pred             eccC
Confidence            9864

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.00  E-value=7.1e-05  Score=64.24  Aligned_cols=76  Identities=21%  Similarity=0.252  Sum_probs=50.5

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCC---hHHHHHHHHHHhcCCCCce
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHS---LEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~---~~~~~~~~~~~~~~~~~d~  392 (408)
                      ++++||+|+ +++|..+++.+...|++ |+++++++++..      ....+...+...   .+...+.+.......++|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~-V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYT-VLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEE-EEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCchhcc------cccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            467899999 99999999999999998 999998765422      111111111111   1223334444444567999


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      +++++|.
T Consensus        75 linnAG~   81 (235)
T d1ooea_          75 VFCVAGG   81 (235)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999985

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.0015  Score=53.20  Aligned_cols=78  Identities=12%  Similarity=0.184  Sum_probs=51.6

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcC--CCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMG--ADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      .+.+++|+|+||.+.+++..+...|++++.++.|+.++.+.+    ++++  ........+..+.+++.+.+      ..
T Consensus        17 ~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~   90 (182)
T d1vi2a1          17 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL------AS   90 (182)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH------HT
T ss_pred             CCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhh------cc
Confidence            457999999999999999999999999999999987665432    2222  22222111111223333322      36


Q ss_pred             CceEEEcccc
Q psy1413         390 PDKTIDCSGI  399 (408)
Q Consensus       390 ~d~i~d~~g~  399 (408)
                      +|+|+||+..
T Consensus        91 ~diiIN~Tp~  100 (182)
T d1vi2a1          91 ADILTNGTKV  100 (182)
T ss_dssp             CSEEEECSST
T ss_pred             cceeccccCC
Confidence            8999999863

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.89  E-value=0.0014  Score=56.66  Aligned_cols=81  Identities=16%  Similarity=0.078  Sum_probs=50.9

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH-H----HHH-HcCCCeEEecCCC---CChHH-HHHHHHHHhc-
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL-K----TAK-EMGADATVLIDRN---HSLEE-ISTHIIELLQ-  386 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-~----~~~-~~ga~~~i~~~~~---~~~~~-~~~~~~~~~~-  386 (408)
                      +.||+|+ +|+|.++++.+...|++ |++++++.+++ +    ++. ..+........+.   .+.++ +.+.+..... 
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~-Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFR-VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            5789999 99999999999999997 88899875543 2    222 2344444333222   12222 2232222221 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      .+++|+.++++|..
T Consensus        82 ~g~iDilvnnAG~~   95 (266)
T d1mxha_          82 FGRCDVLVNNASAY   95 (266)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             hCCCCEEEECCccC
Confidence            24799999999854

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.0018  Score=55.75  Aligned_cols=84  Identities=19%  Similarity=0.186  Sum_probs=60.2

Q ss_pred             CCCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413         315 TLGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-  386 (408)
Q Consensus       315 ~~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-  386 (408)
                      -.++++||+|+ +  |+|..+++.+...|++ |++.+++++.++.+    ...+....+. .+..+..+..+.+.+... 
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLQ-CDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEE-CCTTCHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHhhcCCcceee-cccchHHHHHHHHHHhhhc
Confidence            46789999998 7  7999999999999998 88889987655443    3344444433 334566777777766654 


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                      ....|..+++.+..
T Consensus        81 ~~~~d~~v~~a~~~   94 (258)
T d1qsga_          81 WPKFDGFVHSIGFA   94 (258)
T ss_dssp             CSSEEEEEECCCCC
T ss_pred             ccccceEEEeeccc
Confidence            35679999988754

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.78  E-value=0.0048  Score=49.47  Aligned_cols=77  Identities=16%  Similarity=0.073  Sum_probs=53.4

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      +++++|+|+|.+|..+++.+...|.. |++++|+.++.+.+.+...................+.+      ...|.++.+
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~~-V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i------~~~~~~i~~   74 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGIK-VTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV------AKHDLVISL   74 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCE-EEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHH------TTSSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEECChHHHHHHHhcccccccccccccchhhhHhhh------hccceeEee
Confidence            57899999999999999999999996 99999999999887664433444333322222222222      256777776


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +...
T Consensus        75 ~~~~   78 (182)
T d1e5qa1          75 IPYT   78 (182)
T ss_dssp             SCGG
T ss_pred             ccch
Confidence            6544

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.71  E-value=0.0018  Score=55.98  Aligned_cols=86  Identities=20%  Similarity=0.299  Sum_probs=59.1

Q ss_pred             cCCCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChhhH-HH-HHHcCCCeEEecCCCCChHHHHHHHHHH---h
Q psy1413         314 VTLGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEHKL-KT-AKEMGADATVLIDRNHSLEEISTHIIEL---L  385 (408)
Q Consensus       314 ~~~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-~~-~~~~ga~~~i~~~~~~~~~~~~~~~~~~---~  385 (408)
                      +-.++++||+|+ |  |+|..+++.+...|++ |++++++.+++ +. .++++........+..+.++..+.++.+   .
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~-Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQ-LVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCE-EEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCE-EEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence            456789999995 4  6999999999999998 88888887765 33 3446644443344445555444444443   3


Q ss_pred             c-CCCCceEEEcccch
Q psy1413         386 Q-GEQPDKTIDCSGIE  400 (408)
Q Consensus       386 ~-~~~~d~i~d~~g~~  400 (408)
                      . ...+|+++++.|..
T Consensus        82 ~~~~~ld~~i~~ag~~   97 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFM   97 (268)
T ss_dssp             CTTCCEEEEEECCCCC
T ss_pred             ccCCCcceeeeccccc
Confidence            2 35689999999854

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.59  E-value=0.0037  Score=50.12  Aligned_cols=71  Identities=23%  Similarity=0.325  Sum_probs=51.4

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cC---CCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MG---ADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~g---a~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      .+++++||.|+||.+++++..+..+|++ |.++.|+.+|.+.+.+ +.   ....++.      ++       . ....+
T Consensus        16 ~~~k~vlIlGaGGaarai~~al~~~g~~-i~I~nRt~~ka~~l~~~~~~~~~~~~~~~------~~-------~-~~~~~   80 (170)
T d1nyta1          16 RPGLRILLIGAGGASRGVLLPLLSLDCA-VTITNRTVSRAEELAKLFAHTGSIQALSM------DE-------L-EGHEF   80 (170)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSHHHHHHHHHHTGGGSSEEECCS------GG-------G-TTCCC
T ss_pred             CCCCEEEEECCcHHHHHHHHHhcccceE-EEeccchHHHHHHHHHHHhhccccccccc------cc-------c-ccccc
Confidence            4678999999999999999999999996 9999999988776533 33   2222221      11       1 13578


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |+++||+...
T Consensus        81 dliIN~Tp~G   90 (170)
T d1nyta1          81 DLIINATSSG   90 (170)
T ss_dssp             SEEEECCSCG
T ss_pred             ceeecccccC
Confidence            9999998643

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0043  Score=54.30  Aligned_cols=81  Identities=16%  Similarity=0.095  Sum_probs=55.1

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeE--EEEecChhhHH----HHHHc---CCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRV--VITDILEHKLK----TAKEM---GADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~v--v~~~~~~~~~~----~~~~~---ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      .+||+|+ +|+|+.+++.+...|++-+  ..+.++.++.+    .++++   +........|..+.+++.+.+.++.. +
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-g   82 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE-G   82 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT-S
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc-c
Confidence            4577899 9999999999999999832  22334433322    23332   44444445666778888888877654 5


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      .+|+++++.|..
T Consensus        83 ~idilvnnag~~   94 (285)
T d1jtva_          83 RVDVLVCNAGLG   94 (285)
T ss_dssp             CCSEEEECCCCC
T ss_pred             chhhhhhccccc
Confidence            799999998754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.31  E-value=0.0099  Score=45.24  Aligned_cols=75  Identities=21%  Similarity=0.270  Sum_probs=52.8

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      +++|.|+|.+|+.+++.+...|.. |++++.++++.+.+.+ ++.. ++.. +..+.+    .++++ +-+.+|.++-++
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~~-v~vid~d~~~~~~~~~~~~~~-vi~G-d~~~~~----~l~~~-~i~~a~~vv~~t   73 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGHD-IVLIDIDKDICKKASAEIDAL-VING-DCTKIK----TLEDA-GIEDADMYIAVT   73 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHCSSE-EEES-CTTSHH----HHHHT-TTTTCSEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCC-cceecCChhhhhhhhhhhhhh-hccC-cccchh----hhhhc-ChhhhhhhcccC
Confidence            578889999999999999999987 9999999999887755 4544 4432 212222    22222 235688888877


Q ss_pred             cchh
Q psy1413         398 GIES  401 (408)
Q Consensus       398 g~~~  401 (408)
                      +.+.
T Consensus        74 ~~d~   77 (132)
T d1lssa_          74 GKEE   77 (132)
T ss_dssp             SCHH
T ss_pred             CcHH
Confidence            7653

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.29  E-value=0.002  Score=49.47  Aligned_cols=74  Identities=19%  Similarity=0.258  Sum_probs=54.2

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEccc
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG  398 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g  398 (408)
                      +|+|.|.|-+|+.+++.+...|.. +++++.++++.+.+++.|...++-  +..+.+-    +.++ +-..+|.+|=+++
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~~-vvvid~d~~~~~~~~~~~~~~~~g--d~~~~~~----l~~a-~i~~a~~vi~~~~   73 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGHE-VLAVDINEEKVNAYASYATHAVIA--NATEENE----LLSL-GIRNFEYVIVAIG   73 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCC-CEEEESCHHHHHHTTTTCSEEEEC--CTTCTTH----HHHH-TGGGCSEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCe-EEEecCcHHHHHHHHHhCCcceee--ecccchh----hhcc-CCccccEEEEEcC
Confidence            588999999999999999999998 888999999999998888655432  2222222    2222 1235788887776


Q ss_pred             ch
Q psy1413         399 IE  400 (408)
Q Consensus       399 ~~  400 (408)
                      ..
T Consensus        74 ~~   75 (134)
T d2hmva1          74 AN   75 (134)
T ss_dssp             SC
T ss_pred             ch
Confidence            54

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.24  E-value=0.0066  Score=52.77  Aligned_cols=80  Identities=13%  Similarity=0.041  Sum_probs=51.4

Q ss_pred             EEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH----HHc-CCCeEEec-----------------CCCCChH
Q psy1413         320 VLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA----KEM-GADATVLI-----------------DRNHSLE  375 (408)
Q Consensus       320 ~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~----~~~-ga~~~i~~-----------------~~~~~~~  375 (408)
                      .||+|+ +|+|+.+++.+...|++ |++.++ ++++.+.+    .+. +...+...                 .+..+.+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~-V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYA-VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            578898 99999999999999998 666655 44444332    222 22222111                 1223346


Q ss_pred             HHHHHHHHHhc-CCCCceEEEcccch
Q psy1413         376 EISTHIIELLQ-GEQPDKTIDCSGIE  400 (408)
Q Consensus       376 ~~~~~~~~~~~-~~~~d~i~d~~g~~  400 (408)
                      ++++.+.++.. .+++|+++++.|..
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~  109 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSF  109 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCcc
Confidence            66666666543 25899999999864

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.18  E-value=0.0062  Score=50.96  Aligned_cols=74  Identities=15%  Similarity=0.102  Sum_probs=49.6

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCC-eEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGAS-RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~-~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      .+|||+|+ |.+|..+++.+...|.. +++.++|+.++.+.+.. +.. ++. .+..+.+++.+.+      +++|.+++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~-~~~-~d~~~~~~~~~~~------~~~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EAD-VFI-GDITDADSINPAF------QGIDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTT-EEE-CCTTSHHHHHHHH------TTCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcE-EEE-eeecccccccccc------ccceeeEE
Confidence            58999999 99999999999999975 35666788776654432 232 222 2222334443333      36899999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      +.+..
T Consensus        75 ~a~~~   79 (252)
T d2q46a1          75 LTSAV   79 (252)
T ss_dssp             CCCCC
T ss_pred             EEeec
Confidence            98754

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.12  E-value=0.0087  Score=48.16  Aligned_cols=44  Identities=23%  Similarity=0.246  Sum_probs=38.9

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMG  361 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g  361 (408)
                      .+++-|+|+|.+|+.++.++...|.+ |.+.+|++++.+.+++.+
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~~G~~-V~~~~r~~~~~~~~~~~~   44 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLALKGQS-VLAWDIDAQRIKEIQDRG   44 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHHT
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHcC
Confidence            36899999999999999999999986 999999999888877654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.91  E-value=0.012  Score=46.96  Aligned_cols=71  Identities=21%  Similarity=0.192  Sum_probs=49.0

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC---CCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG---ADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      .++.+++|.|+||.+.+++..+... .++|.++.|+.++.+.+ +.+.   ....+..+.              ..-..+
T Consensus        16 ~~~k~vlIlGaGGaarai~~aL~~~-~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~--------------~~~~~~   80 (171)
T d1p77a1          16 RPNQHVLILGAGGATKGVLLPLLQA-QQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS--------------IPLQTY   80 (171)
T ss_dssp             CTTCEEEEECCSHHHHTTHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG--------------CCCSCC
T ss_pred             CCCCEEEEECCcHHHHHHHHHHccc-CceeeeccchHHHHHHHHHHHhhccccchhhhcc--------------cccccc
Confidence            4667999999999999999888764 46799999999887655 3333   222222211              113478


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |++++|++..
T Consensus        81 diiIN~tp~g   90 (171)
T d1p77a1          81 DLVINATSAG   90 (171)
T ss_dssp             SEEEECCCC-
T ss_pred             ceeeeccccc
Confidence            9999998743

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.81  E-value=0.016  Score=45.81  Aligned_cols=42  Identities=21%  Similarity=0.166  Sum_probs=37.4

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMG  361 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g  361 (408)
                      ++.|+|.|-+|.++++.++..|.+ |++.+|++++.+.+++.|
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~~-V~~~d~~~~~~~~a~~~~   43 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGHY-LIGVSRQQSTCEKAVERQ   43 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHTT
T ss_pred             EEEEEeecHHHHHHHHHHHHCCCE-EEEEECCchHHHHHHHhh
Confidence            478899999999999999999986 889999999888888877

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.77  E-value=0.013  Score=49.40  Aligned_cols=36  Identities=28%  Similarity=0.422  Sum_probs=32.3

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK  353 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~  353 (408)
                      ++++||+|+ +|+|+.+++.+...|++ |+++++++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~-V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYR-VVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCccc
Confidence            578999999 99999999999999997 9999988654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=95.62  E-value=0.013  Score=49.84  Aligned_cols=69  Identities=25%  Similarity=0.338  Sum_probs=46.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc--CCCCceEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ--GEQPDKTI  394 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~~~d~i~  394 (408)
                      +.+||+|+ +++|+.+++.+...|++ |+++++++++.          .   .+..+.+..+....+...  .+.+|.++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~-V~~~~~~~~~~----------~---~d~~~~~~~~~~~~~~~~~~~~~id~lv   67 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQ-IVGIDIRDAEV----------I---ADLSTAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSSSSE----------E---CCTTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECChHHH----------H---HHhcCHHHHHHHHHHHHHHhCCCCcEEE
Confidence            35789999 99999999999999998 88888875421          1   111122344444333322  34689999


Q ss_pred             Ecccch
Q psy1413         395 DCSGIE  400 (408)
Q Consensus       395 d~~g~~  400 (408)
                      ++.|..
T Consensus        68 ~~Ag~~   73 (257)
T d1fjha_          68 LCAGLG   73 (257)
T ss_dssp             ECCCCC
T ss_pred             EcCCCC
Confidence            988743

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.60  E-value=0.029  Score=44.47  Aligned_cols=44  Identities=27%  Similarity=0.349  Sum_probs=38.8

Q ss_pred             EEEEEecchhHHHHHHHHHHhCC-CeEEEEecChhhHHHHHHcCC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGA-SRVVITDILEHKLKTAKEMGA  362 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga-~~vv~~~~~~~~~~~~~~~ga  362 (408)
                      +++|+|.|-+|.++++-++..|. .+|+..+++.+.++.+++.|.
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~   47 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI   47 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhc
Confidence            58899999999999999999986 468999999999999988773

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.48  E-value=0.023  Score=44.14  Aligned_cols=81  Identities=19%  Similarity=0.165  Sum_probs=59.3

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCC-CCceEEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGE-QPDKTID  395 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~-~~d~i~d  395 (408)
                      +++.|+|+ |.+|.++++.++..|.. |.+.+++..........+++.++....   .....+.+.++...- .=.+++|
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~-V~~~d~~~~~~~~~~~~~~~~v~~~~~---~~~~~~v~~~~~~~~~~~~iiiD   85 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYP-ISILDREDWAVAESILANADVVIVSVP---INLTLETIERLKPYLTENMLLAD   85 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCC-EEEECTTCGGGHHHHHTTCSEEEECSC---GGGHHHHHHHHGGGCCTTSEEEE
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCC-cEecccccccccchhhhhccccccccc---hhhheeeeecccccccCCceEEE
Confidence            57999996 99999999999999997 899999877766666667888877654   345555555554322 2247888


Q ss_pred             cccchhh
Q psy1413         396 CSGIEST  402 (408)
Q Consensus       396 ~~g~~~~  402 (408)
                      +++....
T Consensus        86 ~~Svk~~   92 (152)
T d2pv7a2          86 LTSVKRE   92 (152)
T ss_dssp             CCSCCHH
T ss_pred             ecccCHH
Confidence            8875543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.35  E-value=0.035  Score=44.52  Aligned_cols=35  Identities=31%  Similarity=0.467  Sum_probs=31.1

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ....+++|+|+|+-|++++..+..+|.+ |.+++++
T Consensus        41 ~~~k~V~IIGaGPAGL~AA~~la~~G~~-Vtl~E~~   75 (179)
T d1ps9a3          41 VQKKNLAVVGAGPAGLAFAINAAARGHQ-VTLFDAH   75 (179)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHTTTCE-EEEEESS
T ss_pred             CCCcEEEEECccHHHHHHHHHHHhhccc-eEEEecc
Confidence            4457899999999999999999999987 8888875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.20  E-value=0.012  Score=51.40  Aligned_cols=37  Identities=19%  Similarity=0.306  Sum_probs=31.5

Q ss_pred             CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChhh
Q psy1413         316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEHK  353 (408)
Q Consensus       316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~~  353 (408)
                      .++++||+|+ |  |+|+.+++.+...|++ |++.+++...
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~-Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAE-ILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEeCchhh
Confidence            5689999998 5  8999999999999998 8888776543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.17  E-value=0.062  Score=45.36  Aligned_cols=34  Identities=26%  Similarity=0.396  Sum_probs=31.1

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      +.+|+|+|+|++|..+++.+.+.|.+++.++|..
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            4689999999999999999999999999999753

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.17  E-value=0.012  Score=43.88  Aligned_cols=36  Identities=22%  Similarity=0.214  Sum_probs=30.9

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      +..++++|+|+|.+|+.+++.+..+|.+ |.++.+++
T Consensus        20 ~~p~~v~IiGgG~iG~E~A~~l~~~g~~-Vtlv~~~~   55 (117)
T d1onfa2          20 KESKKIGIVGSGYIAVELINVIKRLGID-SYIFARGN   55 (117)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHTTTCE-EEEECSSS
T ss_pred             CCCCEEEEECCchHHHHHHHHHHhcccc-ceeeehhc
Confidence            4457899999999999999999999998 77787653

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=95.15  E-value=0.041  Score=48.80  Aligned_cols=76  Identities=25%  Similarity=0.347  Sum_probs=50.5

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecC----hhhHHHHHHcC-CCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDIL----EHKLKTAKEMG-ADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~----~~~~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ++||+|| |-+|..++..+...|.. |+++++.    .......+.+. -...+...|..+.+.+.+.+++    .++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~----~~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHD-VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD----HAIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH----TTCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCE-EEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc----cCCCE
Confidence            4899999 99999999999999986 8877652    22223332222 2222334454556666666654    37999


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      ||++++.
T Consensus        77 ViHlAa~   83 (338)
T d1udca_          77 VIHFAGL   83 (338)
T ss_dssp             EEECCSC
T ss_pred             EEECCCc
Confidence            9998764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.06  E-value=0.046  Score=48.21  Aligned_cols=78  Identities=15%  Similarity=0.059  Sum_probs=51.4

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-----hHHHH----HHcC-CCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-----KLKTA----KEMG-ADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-----~~~~~----~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      .++||+|+ |-+|..++..+...|.. |+.++|...     +.+.+    .+.. ....+...|..+.+.+.+.+..   
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~---   77 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYE-VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV---   77 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH---
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCE-EEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhh---
Confidence            57899999 99999999999999987 999987422     22111    1111 2233444454455555555543   


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                       .++|+|+++++..
T Consensus        78 -~~~D~Vih~Aa~~   90 (339)
T d1n7ha_          78 -IKPDEVYNLAAQS   90 (339)
T ss_dssp             -HCCSEEEECCSCC
T ss_pred             -hccchhhhccccc
Confidence             4799999998753

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.05  E-value=0.043  Score=49.15  Aligned_cols=78  Identities=15%  Similarity=0.131  Sum_probs=49.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-----hHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-----KLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-----~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      +.+||+|| |-+|..+++.+...|.. |++++|...     +.+.+..    ......+..-|..+.+++.+.++..   
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYE-VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCE-EEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            56889999 99999999999999986 899988432     2222211    1122233333445567777776653   


Q ss_pred             CCCceEEEcccch
Q psy1413         388 EQPDKTIDCSGIE  400 (408)
Q Consensus       388 ~~~d~i~d~~g~~  400 (408)
                       .+|.||++++..
T Consensus        78 -~~d~v~h~aa~~   89 (357)
T d1db3a_          78 -QPDEVYNLGAMS   89 (357)
T ss_dssp             -CCSEEEECCCCC
T ss_pred             -CCCEEEEeeccc
Confidence             689999998753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.00  E-value=0.016  Score=43.31  Aligned_cols=37  Identities=35%  Similarity=0.493  Sum_probs=32.3

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      +++.++++|+|+|.+|..++..++.+|.+ |.++.+++
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~~-Vtli~~~~   63 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGVH-VSLVETQP   63 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccce-EEEEeecc
Confidence            46778999999999999999999999987 77787654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.00  E-value=0.018  Score=42.69  Aligned_cols=34  Identities=21%  Similarity=0.304  Sum_probs=29.8

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecChh
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILEH  352 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~  352 (408)
                      ++++|+|+|.+|+.+++.+..+|.+ |.++.+.+.
T Consensus        23 ~~v~IiGgG~ig~E~A~~l~~~G~~-Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGGGYIGIELGTAYANFGTK-VTILEGAGE   56 (117)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSSS
T ss_pred             CeEEEECCCccceeeeeeecccccE-EEEEEecce
Confidence            6899999999999999999999998 777776543

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.81  E-value=0.017  Score=43.26  Aligned_cols=33  Identities=27%  Similarity=0.408  Sum_probs=29.0

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ++++|+|+|.+|+.+++++..+|.+ |.++.+++
T Consensus        24 ~~~vIiG~G~ig~E~A~~l~~lG~~-Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIGGGIIGLEMGSVYSRLGSK-VTVVEFQP   56 (122)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSS
T ss_pred             CeEEEECCCchHHHHHHHHHhhCcc-eeEEEecc
Confidence            6899999999999999999999998 77776543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=94.80  E-value=0.036  Score=49.31  Aligned_cols=80  Identities=20%  Similarity=0.179  Sum_probs=52.6

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHH-HHHHcC-C-CeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLK-TAKEMG-A-DATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~~~~~g-a-~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      .++++||+|+ |-+|..+++.+...|.. |++++|+..+.. .++... . ...+...|..+.+.+.+.++.    ..+|
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~-V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~----~~~~   81 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGAT-VKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIRE----FQPE   81 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHH----HCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhh----chhh
Confidence            3589999999 99999999999999997 999998765432 222211 1 112223333344445454443    3678


Q ss_pred             eEEEcccch
Q psy1413         392 KTIDCSGIE  400 (408)
Q Consensus       392 ~i~d~~g~~  400 (408)
                      +++++++..
T Consensus        82 ~v~~~aa~~   90 (356)
T d1rkxa_          82 IVFHMAAQP   90 (356)
T ss_dssp             EEEECCSCC
T ss_pred             hhhhhhccc
Confidence            999988754

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.77  E-value=0.089  Score=38.40  Aligned_cols=34  Identities=18%  Similarity=0.239  Sum_probs=29.3

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .+.++||+|+|.+|..-++.+...|++ |++++..
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga~-v~v~~~~   44 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGAR-LTVNALT   44 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTBE-EEEEESS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecc
Confidence            467999999999999999999999998 6666543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.77  E-value=0.023  Score=46.52  Aligned_cols=48  Identities=27%  Similarity=0.382  Sum_probs=42.2

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCe
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADA  364 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~  364 (408)
                      .+.+++|.|.|.+|..+++++...|++ |++.+.+.++......+|++.
T Consensus        26 ~gk~v~IqG~G~VG~~~A~~L~~~Gak-vvv~d~d~~~~~~~~~~g~~~   73 (201)
T d1c1da1          26 DGLTVLVQGLGAVGGSLASLAAEAGAQ-LLVADTDTERVAHAVALGHTA   73 (201)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHTTCEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEecchHHHHHHHHhhcccc
Confidence            568999999999999999999999998 888998888888888777643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.57  E-value=0.091  Score=45.98  Aligned_cols=75  Identities=24%  Similarity=0.298  Sum_probs=49.5

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecC--hh---hHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDIL--EH---KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~--~~---~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ++||+|+ |-+|..+++.+...|.+ |+++++-  ..   +.+.++..+--.++ ..|..+.+++.+.++.    .++|.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~-V~~id~~~~~~~~~~~~~~~~~~~~~~i-~~Di~~~~~l~~~~~~----~~~d~   75 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGID-LIVFDNLSRKGATDNLHWLSSLGNFEFV-HGDIRNKNDVTRLITK----YMPDS   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSTTHHHHHHHHHTTCCCEEE-ECCTTCHHHHHHHHHH----HCCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCE-EEEEECCCcccchhHHHHhhccCCcEEE-EcccCCHHHHHHHHHh----cCCce
Confidence            6899999 99999999999999987 7777631  22   22333443322333 3344455666555543    36899


Q ss_pred             EEEcccc
Q psy1413         393 TIDCSGI  399 (408)
Q Consensus       393 i~d~~g~  399 (408)
                      ||++.+.
T Consensus        76 Vih~aa~   82 (338)
T d1orra_          76 CFHLAGQ   82 (338)
T ss_dssp             EEECCCC
T ss_pred             EEeeccc
Confidence            9998864

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.57  E-value=0.013  Score=43.50  Aligned_cols=33  Identities=27%  Similarity=0.432  Sum_probs=29.3

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ++++|+|+|.+|+.+++.++.+|.+ |.++.+.+
T Consensus        22 ~~vvIiGgG~ig~E~A~~l~~~G~~-Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGAGYIGVELGGVINGLGAK-THLFEMFD   54 (116)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSS
T ss_pred             CEEEEECCChhhHHHHHHhhccccE-EEEEeecc
Confidence            6799999999999999999999997 77787754

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=94.55  E-value=0.1  Score=39.14  Aligned_cols=58  Identities=19%  Similarity=0.225  Sum_probs=42.2

Q ss_pred             CcCCCCEEEEE-ec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413         313 GVTLGSKVLIT-GA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       313 ~~~~~~~~lv~-G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      .+...+.+++. +. -..-..+...++..+..++++...+.+..+.++++|++.++++..
T Consensus        61 ~i~~a~~vi~~~~~~~~~~~~~~~~~~~~~~~~iiar~~~~~~~~~l~~~Gad~vi~p~~  120 (134)
T d2hmva1          61 GIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEK  120 (134)
T ss_dssp             TGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHTCSEEECHHH
T ss_pred             CCccccEEEEEcCchHHhHHHHHHHHHHcCCCcEEeecccHhHHHHHHHCCCCEEEChHH
Confidence            34444555554 44 455556666777888888888888888889999999999998753

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.51  E-value=0.018  Score=43.22  Aligned_cols=35  Identities=26%  Similarity=0.392  Sum_probs=30.2

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChh
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEH  352 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~  352 (408)
                      .++++|+|+|.+|+.+++++..+|.+ |.++.+++.
T Consensus        25 p~~~viiG~G~iglE~A~~~~~~G~~-Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGAGYIGLEMGSVWGRIGSE-VTVVEFASE   59 (123)
T ss_dssp             CSEEEESCCSHHHHHHHHHHHHHTCE-EEEECSSSS
T ss_pred             CCeEEEEccchHHHHHHHHHHhcCCe-EEEEEEccc
Confidence            36899999999999999999999997 888877543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.50  E-value=0.028  Score=50.05  Aligned_cols=46  Identities=30%  Similarity=0.206  Sum_probs=38.6

Q ss_pred             ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH
Q psy1413         311 RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA  357 (408)
Q Consensus       311 ~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~  357 (408)
                      ...+.++++|||+|+ |-+|..+++.+...|.+ |+++.|+.++.+.+
T Consensus         5 ~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~-V~~~vR~~~~~~~~   51 (342)
T d1y1pa1           5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYK-VRGTARSASKLANL   51 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHH
T ss_pred             CCCCCCcCEEEEECCCCHHHHHHHHHHHHCcCE-EEEEeCCchhHHHH
Confidence            345688999999999 99999999999999987 88888887765544

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.49  E-value=0.018  Score=40.78  Aligned_cols=71  Identities=23%  Similarity=0.230  Sum_probs=46.6

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChh--hHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEH--KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~--~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .+++++|+|.|..|+++++++...|++ |.+.+.+..  ..+.+++ +....+...+    ++   .+      ..+|.+
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~~-v~~~D~~~~~~~~~~~~~-~~~~~~~~~~----~~---~~------~~~d~v   68 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGVT-PRVMDTRMTPPGLDKLPE-AVERHTGSLN----DE---WL------MAADLI   68 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTCC-CEEEESSSSCTTGGGSCT-TSCEEESBCC----HH---HH------HHCSEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCCE-EEEeeCCcCchhHHHHhh-ccceeecccc----hh---hh------ccCCEE
Confidence            356799999999999999999999998 888876433  2222222 3334443322    11   11      246888


Q ss_pred             EEcccchh
Q psy1413         394 IDCSGIES  401 (408)
Q Consensus       394 ~d~~g~~~  401 (408)
                      +-+.|.+.
T Consensus        69 i~SPGi~~   76 (93)
T d2jfga1          69 VASPGIAL   76 (93)
T ss_dssp             EECTTSCT
T ss_pred             EECCCCCC
Confidence            88887653

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.48  E-value=0.032  Score=41.39  Aligned_cols=39  Identities=21%  Similarity=0.137  Sum_probs=33.1

Q ss_pred             cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ....++++++|+|+|.+|+.+++.+..+|.. +.++.+++
T Consensus        17 l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~~-vt~i~~~~   55 (121)
T d1mo9a2          17 LDYEPGSTVVVVGGSKTAVEYGCFFNATGRR-TVMLVRTE   55 (121)
T ss_dssp             CCSCCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred             HhhCCCCEEEEECCCHHHHHHHHHHHhcchh-heEeeccc
Confidence            3456789999999999999999999999988 77777653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.47  E-value=0.066  Score=41.90  Aligned_cols=43  Identities=26%  Similarity=0.248  Sum_probs=37.2

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGA  362 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga  362 (408)
                      ++-++|.|.+|..+++.+...|.+ |++.+|+.++.+.+++.++
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~~-V~~~d~~~~~~~~~~~~~~   44 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGYS-LVVSDRNPEAIADVIAAGA   44 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHTTC
T ss_pred             EEEEEehhHHHHHHHHHHHHCCCe-EEEEeCCcchhHHHHHhhh
Confidence            367889999999999999999997 9999999999888777654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.44  E-value=0.022  Score=45.93  Aligned_cols=38  Identities=26%  Similarity=0.397  Sum_probs=32.9

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA  357 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~  357 (408)
                      ++.|+|| |++|..+++.+...|++ |++.+|++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~-V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHE-IVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCE-EEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHH
Confidence            4678866 99999999999999998 88889999887654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.02  Score=42.09  Aligned_cols=37  Identities=22%  Similarity=0.463  Sum_probs=31.2

Q ss_pred             CCC-CEEEEEecchhHHHHHHHHHHhCCCeEEEEecChh
Q psy1413         315 TLG-SKVLITGAGPIGLVTLLTARALGASRVVITDILEH  352 (408)
Q Consensus       315 ~~~-~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~  352 (408)
                      +++ .++.|+|+|-||+++++-++.+|.+ +++.+.+++
T Consensus         8 ~~~~~kigIlGgGQL~rMla~aA~~lG~~-v~v~d~~~~   45 (111)
T d1kjqa2           8 RPAATRVMLLGSGELGKEVAIECQRLGVE-VIAVDRYAD   45 (111)
T ss_dssp             STTCCEEEEESCSHHHHHHHHHHHTTTCE-EEEEESSTT
T ss_pred             CCCCCEEEEEeCCHHHHHHHHHHHHCCCE-EEEEcCCCC
Confidence            444 4699999999999999999999998 777876654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.41  E-value=0.04  Score=41.15  Aligned_cols=36  Identities=28%  Similarity=0.431  Sum_probs=30.7

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ...++++|+|+|.+|+.+++.+..+|.+ |.++.+++
T Consensus        28 ~~~k~vvViGgG~iG~E~A~~l~~~g~~-Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGSGYIGIEAAEAFAKAGKK-VTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSS
T ss_pred             cCCCEEEEECChHHHHHHHHHhhccceE-EEEEEecC
Confidence            3457899999999999999999999998 77776653

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.37  E-value=0.018  Score=46.62  Aligned_cols=34  Identities=26%  Similarity=0.379  Sum_probs=30.5

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      +++|+|+|+|+.|++++..|+.+|++.|.+++++
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~   37 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQ   37 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEec
Confidence            4679999999999999999999999768888876

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.35  E-value=0.099  Score=47.17  Aligned_cols=78  Identities=22%  Similarity=0.350  Sum_probs=49.8

Q ss_pred             CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC--------------------hhhHHHHHH-cCCCeEEecCCCCCh
Q psy1413         317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDIL--------------------EHKLKTAKE-MGADATVLIDRNHSL  374 (408)
Q Consensus       317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~--------------------~~~~~~~~~-~ga~~~i~~~~~~~~  374 (408)
                      |.++||+|+ |-+|..+++.+...|.. |+++|..                    .++....+. .+....+..-|..+.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~-V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYE-VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCH
Confidence            468999999 99999999999999987 8887621                    111222222 222323333344455


Q ss_pred             HHHHHHHHHHhcCCCCceEEEcccc
Q psy1413         375 EEISTHIIELLQGEQPDKTIDCSGI  399 (408)
Q Consensus       375 ~~~~~~~~~~~~~~~~d~i~d~~g~  399 (408)
                      +.+.+.+...    .+|+||++++.
T Consensus        80 ~~l~~~~~~~----~~d~ViHlAa~  100 (393)
T d1i24a_          80 EFLAESFKSF----EPDSVVHFGEQ  100 (393)
T ss_dssp             HHHHHHHHHH----CCSEEEECCSC
T ss_pred             HHHHHHHHhh----cchheeccccc
Confidence            6666555543    68999998863

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.33  E-value=0.096  Score=46.36  Aligned_cols=76  Identities=21%  Similarity=0.211  Sum_probs=48.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh----hhHH---HHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILE----HKLK---TAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ  389 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~----~~~~---~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  389 (408)
                      +.+||+|+ |-+|..+++.+...|.+ |+++++..    ....   ....-+...+  ..|..+.++++..+..    .+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~-V~~~d~~~~~~~~~~~~~~~~~~~~v~~~--~~Dl~d~~~l~~~~~~----~~   74 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYD-CVVADNLSNSTYDSVARLEVLTKHHIPFY--EVDLCDRKGLEKVFKE----YK   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSSCCTHHHHHHHHHHTSCCCEE--ECCTTCHHHHHHHHHH----SC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCe-EEEEECCCCcchhHHHhHHhhcccCCeEE--EeecCCHHHHHHHHhc----cC
Confidence            46899999 99999999999999987 77776421    1111   1122223222  2333445555555543    37


Q ss_pred             CceEEEcccch
Q psy1413         390 PDKTIDCSGIE  400 (408)
Q Consensus       390 ~d~i~d~~g~~  400 (408)
                      +|+||++.+..
T Consensus        75 ~d~VihlAa~~   85 (347)
T d1z45a2          75 IDSVIHFAGLK   85 (347)
T ss_dssp             CCEEEECCSCC
T ss_pred             CCEEEEccccc
Confidence            99999988754

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.30  E-value=0.026  Score=41.99  Aligned_cols=32  Identities=34%  Similarity=0.423  Sum_probs=28.4

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ++++|+|+|.+|+.+++++..+|.+ |.++.++
T Consensus        23 ~~i~IiG~G~ig~E~A~~l~~~G~~-Vtiv~~~   54 (119)
T d3lada2          23 GKLGVIGAGVIGLELGSVWARLGAE-VTVLEAM   54 (119)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCE-EEEEESS
T ss_pred             CeEEEECCChHHHHHHHHHHHcCCc-eEEEEee
Confidence            7799999999999999999999998 6666654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.017  Score=48.47  Aligned_cols=77  Identities=21%  Similarity=0.258  Sum_probs=47.9

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCC-CeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGA-SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga-~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      .+.++||+|| |-+|..+++.+...|. .+|++++|++.+...-+.-.....+  .|   ..+.++. .++.  +++|.+
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~--~D---~~~~~~~-~~~~--~~~d~v   84 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEV--VD---FEKLDDY-ASAF--QGHDVG   84 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEE--CC---GGGGGGG-GGGG--SSCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeee--ec---ccccccc-cccc--cccccc
Confidence            3468999999 9999999999988886 4699999875443221111122211  12   1222222 2222  478999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      |.|+|..
T Consensus        85 i~~~~~~   91 (232)
T d2bkaa1          85 FCCLGTT   91 (232)
T ss_dssp             EECCCCC
T ss_pred             ccccccc
Confidence            9998854

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.06  E-value=0.048  Score=46.56  Aligned_cols=60  Identities=25%  Similarity=0.410  Sum_probs=42.5

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      ++||+|| |-+|..+++.++..|.+ |+.++|++-              |   ..+.+++++.+..    ...|+||++.
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~-Vi~~~r~~~--------------D---~~d~~~~~~~l~~----~~~d~vih~a   60 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVE-VIPTDVQDL--------------D---ITNVLAVNKFFNE----KKPNVVINCA   60 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEE-EEEECTTTC--------------C---TTCHHHHHHHHHH----HCCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE-EEEeechhc--------------c---CCCHHHHHHHHHH----cCCCEEEeec
Confidence            5899999 99999999999999987 888877531              1   1223444444443    2578888877


Q ss_pred             cch
Q psy1413         398 GIE  400 (408)
Q Consensus       398 g~~  400 (408)
                      +..
T Consensus        61 ~~~   63 (281)
T d1vl0a_          61 AHT   63 (281)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            644

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.92  E-value=0.024  Score=42.55  Aligned_cols=33  Identities=24%  Similarity=0.270  Sum_probs=29.4

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ++++|+|+|.+|+.+++.++.+|.+ |.++.+++
T Consensus        23 k~vvIvGgG~iG~E~A~~l~~~G~~-Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAGYIAVEMAGILSALGSK-TSLMIRHD   55 (125)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSS
T ss_pred             CEEEEEcCCccHHHHHHHHhcCCcE-EEEEeecc
Confidence            6899999999999999999999998 77787753

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=93.81  E-value=0.086  Score=47.13  Aligned_cols=77  Identities=23%  Similarity=0.243  Sum_probs=50.0

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecC--hhhHHHHHHcC--CCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDIL--EHKLKTAKEMG--ADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~--~~~~~~~~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      ++||+|+ |-+|..+++.+...|...|+.+++.  ..+.+.++.+.  ....+...|..+...+.+.+...    .+|+|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~----~~d~V   77 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY----QPDAV   77 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC----CCCEE
Confidence            5899999 9999999999999999867777642  12222222222  12233334444556666665543    68999


Q ss_pred             EEcccc
Q psy1413         394 IDCSGI  399 (408)
Q Consensus       394 ~d~~g~  399 (408)
                      |++++.
T Consensus        78 ihlAa~   83 (361)
T d1kewa_          78 MHLAAE   83 (361)
T ss_dssp             EECCSC
T ss_pred             EECccc
Confidence            999864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.72  E-value=0.037  Score=41.26  Aligned_cols=32  Identities=22%  Similarity=0.213  Sum_probs=27.8

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ++++|+|+|.+|+.++++++.+|.+ |.++.++
T Consensus        21 ~~vvIIGgG~iG~E~A~~l~~lG~~-Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGASYVALECAGFLAGIGLD-VTVMVRS   52 (122)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred             CeEEEECCCccHHHHHHHHhhcCCe-EEEEEec
Confidence            5789999999999999999999998 6666654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.70  E-value=0.018  Score=43.78  Aligned_cols=36  Identities=25%  Similarity=0.361  Sum_probs=31.7

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      +++.++++|+|+|.+|+.++..++.+|.+ |.++.++
T Consensus        32 ~~~~k~v~VIGgG~iG~E~A~~l~~~g~~-Vtvie~~   67 (133)
T d1q1ra2          32 LIADNRLVVIGGGYIGLEVAATAIKANMH-VTLLDTA   67 (133)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSS
T ss_pred             hccCCEEEEECCchHHHHHHHHHHhhCcc-eeeeeec
Confidence            46678999999999999999999999997 7777765

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.68  E-value=0.029  Score=42.11  Aligned_cols=33  Identities=30%  Similarity=0.490  Sum_probs=29.1

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .++++|+|+|.+|+.++++++.+|.+ |.++.++
T Consensus        26 p~~vvIiGgG~IG~E~A~~~~~~G~~-Vtive~~   58 (125)
T d1ojta2          26 PGKLLIIGGGIIGLEMGTVYSTLGSR-LDVVEMM   58 (125)
T ss_dssp             CSEEEEESCSHHHHHHHHHHHHHTCE-EEEECSS
T ss_pred             CCeEEEECCCHHHHHHHHHhhcCCCE-EEEEEee
Confidence            47899999999999999999999998 7777654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.64  E-value=0.11  Score=39.41  Aligned_cols=77  Identities=12%  Similarity=0.149  Sum_probs=52.8

Q ss_pred             EEEEEec-chhHHHHHHHHHH-hCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         319 KVLITGA-GPIGLVTLLTARA-LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~-~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ++.|.|+ |-+|+.+++.... .+.. ++..-..++........++|.+||+...   +...+.++... ..+..+|+-+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~-l~~~~d~~~~~~~~~~~~~DvvIDFS~p---~~~~~~~~~~~-~~~~~~ViGT   75 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLT-LSAELDAGDPLSLLTDGNTEVVIDFTHP---DVVMGNLEFLI-DNGIHAVVGT   75 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSE-EEEEECTTCCTHHHHTTTCSEEEECCCT---TTHHHHHHHHH-HTTCEEEECC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEecCCchhhhccccCCEEEEcccH---HHHHHHHHHHH-hcCCCEEEec
Confidence            4789998 9999999998765 4555 4433333344455555679999999773   44555555544 3578899988


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      +|-.
T Consensus        76 TG~~   79 (135)
T d1yl7a1          76 TGFT   79 (135)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8854

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.58  E-value=0.19  Score=38.71  Aligned_cols=44  Identities=20%  Similarity=0.260  Sum_probs=35.3

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGA  362 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga  362 (408)
                      .+.++|+|.+|.++++-+...|...|.+.+|+.++.+.+. ++|.
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~   46 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGV   46 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccc
Confidence            4778899999999998666667667999999999987764 4664

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.57  E-value=0.11  Score=40.44  Aligned_cols=74  Identities=23%  Similarity=0.279  Sum_probs=52.0

Q ss_pred             CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         313 GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       313 ~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .+-.+++++|.|-|-+|+.+++.++.+|++ |++++..+.+.=++.-.|....          .+    .++  -...|+
T Consensus        20 ~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~-V~v~e~dp~~al~A~~dG~~v~----------~~----~~a--~~~adi   82 (163)
T d1li4a1          20 VMIAGKVAVVAGYGDVGKGCAQALRGFGAR-VIITEIDPINALQAAMEGYEVT----------TM----DEA--CQEGNI   82 (163)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHTTCEEC----------CH----HHH--TTTCSE
T ss_pred             ceecCCEEEEeccccccHHHHHHHHhCCCe-eEeeecccchhHHhhcCceEee----------eh----hhh--hhhccE
Confidence            345788999998899999999999999998 9999988766444444443321          11    122  134688


Q ss_pred             EEEcccchhhh
Q psy1413         393 TIDCSGIESTI  403 (408)
Q Consensus       393 i~d~~g~~~~~  403 (408)
                      ++-++|..+.+
T Consensus        83 vvtaTGn~~vI   93 (163)
T d1li4a1          83 FVTTTGCIDII   93 (163)
T ss_dssp             EEECSSCSCSB
T ss_pred             EEecCCCccch
Confidence            88888876543

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=93.52  E-value=0.22  Score=38.21  Aligned_cols=52  Identities=12%  Similarity=0.040  Sum_probs=32.2

Q ss_pred             CccceeEEeeccceeeeCCCCCCccc-----ccccc-hhhhhhh-hhhccCcCCCCEEEE
Q psy1413         270 HGNLSRYYRHAADFCHKLPDHVSLEE-----GALLE-PLSVGVH-ACRRAGVTLGSKVLI  322 (408)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~p~~~~~~~-----aa~~~-~~~~~~~-~~~~~~~~~~~~~lv  322 (408)
                      .++|++|.+.+++.+.++|++.+...     .+.+. .-.|+++ .+ .-..+.++|+|+
T Consensus        88 ~~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl-~~~~k~Getvv~  146 (147)
T d1v3va1          88 QSGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEM-LNGANLGKAVVT  146 (147)
T ss_dssp             CCCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHH-HTTCCSSEEEEE
T ss_pred             ccCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHh-hCCCCCCCEEEe
Confidence            47899999999999999987654322     22222 3334344 43 222356777775

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.45  E-value=0.081  Score=40.60  Aligned_cols=77  Identities=21%  Similarity=0.212  Sum_probs=48.0

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCC-CeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGA-SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga-~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      +++.|+|+ |.+|..++.++...|. +.+++++.++.+.+.+.-.-++.....+......+..+.+      ++.|+|+-
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~------~~aDivVi   74 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCL------KGCDVVVI   74 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHH------TTCSEEEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHh------CCCCEEEE
Confidence            46889997 9999999999998875 8899999876654433221122111111100113333332      47899999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      +.|.+
T Consensus        75 tag~~   79 (144)
T d1mlda1          75 PAGVP   79 (144)
T ss_dssp             CCSCC
T ss_pred             CCCcC
Confidence            88853

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.31  E-value=0.031  Score=41.19  Aligned_cols=32  Identities=31%  Similarity=0.511  Sum_probs=28.8

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ++++|+|+|.+|+.+++.+..+|.+ |.++.+.
T Consensus        22 ~~vvIiGgG~~G~E~A~~l~~~g~~-Vtlve~~   53 (115)
T d1lvla2          22 QHLVVVGGGYIGLELGIAYRKLGAQ-VSVVEAR   53 (115)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHHTCE-EEEECSS
T ss_pred             CeEEEECCCHHHHHHHHHHhhcccc-eEEEeee
Confidence            6899999999999999999999997 7777765

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.14  E-value=0.026  Score=38.31  Aligned_cols=33  Identities=21%  Similarity=0.320  Sum_probs=28.7

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      +++.|+|+|-||+++++-++.+|.+ +++++.++
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~~-v~vldp~~   34 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGIA-VWPVGLDA   34 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTEE-EEEECTTS
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCE-EEEEcCCC
Confidence            4789999999999999999999999 77776543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=92.89  E-value=0.21  Score=42.79  Aligned_cols=74  Identities=26%  Similarity=0.258  Sum_probs=46.0

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-----hHHH---HHHcCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-----KLKT---AKEMGADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-----~~~~---~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      +++||+|+ |-+|..+++.+...|.. |++++|+..     +.+.   ++..++..+  ..+..+.+.+.+    ..  .
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~-V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v--~~d~~d~~~~~~----~~--~   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRPEVVSNIDKVQMLLYFKQLGAKLI--EASLDDHQRLVD----AL--K   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCSCCSSCHHHHHHHHHHHTTTCEEE--CCCSSCHHHHHH----HH--T
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECCCcccchhHHHHHhhhccCCcEEE--Eeecccchhhhh----hc--c
Confidence            56999999 99999999999999976 888887632     2222   233344332  222223333322    22  3


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      +.+.++.+.+..
T Consensus        75 ~~~~~~~~~~~~   86 (312)
T d1qyda_          75 QVDVVISALAGG   86 (312)
T ss_dssp             TCSEEEECCCCS
T ss_pred             Ccchhhhhhhhc
Confidence            677888877643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.82  E-value=0.1  Score=46.00  Aligned_cols=76  Identities=17%  Similarity=0.038  Sum_probs=47.9

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      ++||+|+ |-+|..+++.+...|-..|+++++...+...+.+. ....+...|..+.+++.+.+.     +++|.||+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~-~~~~~i~~Di~~~~~~~~~~~-----~~~d~Vih~a   75 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH-PHFHFVEGDISIHSEWIEYHV-----KKCDVVLPLV   75 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTC-TTEEEEECCTTTCSHHHHHHH-----HHCSEEEECB
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccC-CCeEEEECccCChHHHHHHHH-----hCCCcccccc
Confidence            5899999 99999999999888865688888765544333222 222222223222334443332     2589999988


Q ss_pred             cch
Q psy1413         398 GIE  400 (408)
Q Consensus       398 g~~  400 (408)
                      +..
T Consensus        76 ~~~   78 (342)
T d2blla1          76 AIA   78 (342)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            754

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.79  E-value=0.26  Score=42.67  Aligned_cols=78  Identities=15%  Similarity=0.097  Sum_probs=50.2

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh--hHHHHHHcCCC--eEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEH--KLKTAKEMGAD--ATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~--~~~~~~~~ga~--~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      +++||+|+ |-+|..++..+...|.+ |+.++|...  ..+.++.++.+  ..+..-|..+.+.+.+.+...    ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~-V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYR-VHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCE-EEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc----cccc
Confidence            47999999 99999999999989987 888887542  23444554432  222233434455555555443    4567


Q ss_pred             EEEcccch
Q psy1413         393 TIDCSGIE  400 (408)
Q Consensus       393 i~d~~g~~  400 (408)
                      ++.+....
T Consensus        76 ~~~~a~~~   83 (321)
T d1rpna_          76 VYNLAAQS   83 (321)
T ss_dssp             EEECCSCC
T ss_pred             cccccccc
Confidence            77766543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.63  E-value=0.21  Score=44.09  Aligned_cols=75  Identities=15%  Similarity=0.043  Sum_probs=47.3

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHH--HHHHc-CCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLK--TAKEM-GADATVLIDRNHSLEEISTHIIELLQGEQPD  391 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~--~~~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d  391 (408)
                      ..++++|+|+ |.+|..++..+...|.+ |+++.|+.++..  .+... |+. ++.. |..+..   ..+..+.  +++|
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~v~-~~~g-D~~d~~---~~~~~a~--~~~~   73 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLKGLIAEELQAIPNVT-LFQG-PLLNNV---PLMDTLF--EGAH   73 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSCSHHHHHHHTSTTEE-EEES-CCTTCH---HHHHHHH--TTCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCe-EEEEECCcchhhhhhhcccCCCE-EEEe-eCCCcH---HHHHHHh--cCCc
Confidence            4578999999 99999999999999987 888888755432  33333 333 3322 222222   2333343  3677


Q ss_pred             eEEEccc
Q psy1413         392 KTIDCSG  398 (408)
Q Consensus       392 ~i~d~~g  398 (408)
                      .++....
T Consensus        74 ~~~~~~~   80 (350)
T d1xgka_          74 LAFINTT   80 (350)
T ss_dssp             EEEECCC
T ss_pred             eEEeecc
Confidence            7776543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=92.60  E-value=0.28  Score=34.47  Aligned_cols=73  Identities=16%  Similarity=0.125  Sum_probs=51.3

Q ss_pred             CcCCCCEEEEEecchhHHHH-HHHHHHhCCCeEEEEecCh-hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413         313 GVTLGSKVLITGAGPIGLVT-LLTARALGASRVVITDILE-HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP  390 (408)
Q Consensus       313 ~~~~~~~~lv~G~G~~G~~~-~~~~~~~Ga~~vv~~~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  390 (408)
                      .++...++-++|-||.|.+. |++++.+|.. |...|... ...+.+++.|......++.    +.          -.+.
T Consensus         4 ~~~~~~~ihfiGigG~GMs~LA~~L~~~G~~-VsGSD~~~~~~~~~L~~~Gi~v~~g~~~----~~----------i~~~   68 (96)
T d1p3da1           4 EMRRVQQIHFIGIGGAGMSGIAEILLNEGYQ-ISGSDIADGVVTQRLAQAGAKIYIGHAE----EH----------IEGA   68 (96)
T ss_dssp             CCTTCCEEEEETTTSTTHHHHHHHHHHHTCE-EEEEESCCSHHHHHHHHTTCEEEESCCG----GG----------GTTC
T ss_pred             cchhCCEEEEEEECHHHHHHHHHHHHhCCCE-EEEEeCCCChhhhHHHHCCCeEEECCcc----cc----------CCCC
Confidence            35667889999889999666 9999999997 88888763 3456677789865443322    11          1357


Q ss_pred             ceEEEcccch
Q psy1413         391 DKTIDCSGIE  400 (408)
Q Consensus       391 d~i~d~~g~~  400 (408)
                      |.++=+++.+
T Consensus        69 d~vV~S~AI~   78 (96)
T d1p3da1          69 SVVVVSSAIK   78 (96)
T ss_dssp             SEEEECTTSC
T ss_pred             CEEEECCCcC
Confidence            8888766654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.55  E-value=0.092  Score=42.46  Aligned_cols=39  Identities=31%  Similarity=0.394  Sum_probs=33.8

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA  357 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~  357 (408)
                      +++.|+|+|.+|...++++...|.+ |++.+++++.++.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~~-V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGHT-VVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCCc-EEEEECChHHHHHH
Confidence            4789999999999999999999987 99999998765543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.54  E-value=0.22  Score=38.71  Aligned_cols=43  Identities=16%  Similarity=0.257  Sum_probs=36.9

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGA  362 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga  362 (408)
                      ++.++|.|-+|..+++.+...|.. |.+.+|+.++.+.+++.++
T Consensus         3 kIg~IGlG~MG~~iA~~L~~~g~~-v~~~d~~~~~~~~~~~~~~   45 (162)
T d3cuma2           3 QIAFIGLGHMGAPMATNLLKAGYL-LNVFDLVQSAVDGLVAAGA   45 (162)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCE-EEEECSSHHHHHHHHHTTC
T ss_pred             EEEEEEEHHHHHHHHHHHHHCCCe-EEEEECchhhhhhhhhhhc
Confidence            578899999999999999999986 9999999998887766653

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.27  E-value=0.13  Score=37.76  Aligned_cols=34  Identities=21%  Similarity=0.108  Sum_probs=28.0

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCC--eEEEEecC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGAS--RVVITDIL  350 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~--~vv~~~~~  350 (408)
                      .++++|+|+|.+|..++.++..+|.+  .|.++.+.
T Consensus        20 p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~   55 (117)
T d1aoga2          20 PRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRG   55 (117)
T ss_dssp             CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             CCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEecc
Confidence            46899999999999999999888764  47777664

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.26  E-value=0.062  Score=45.30  Aligned_cols=34  Identities=21%  Similarity=0.317  Sum_probs=30.1

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ..+|+|+|+|+.|++++..++..|.+ |+++++++
T Consensus         4 ~~kV~IiGaG~aGl~~A~~L~~~G~~-v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGGSISGLTAALMLRDAGVD-VDVYERSP   37 (265)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSS
T ss_pred             CCcEEEECcCHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence            46799999999999999999999997 88898753

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=92.14  E-value=0.12  Score=44.12  Aligned_cols=63  Identities=14%  Similarity=0.347  Sum_probs=42.4

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      ++||+|+ |-+|..+++.+...|  +++.++++...      +    .   .|..+.+++++.++..    ++|+||+++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g--~~v~~~~~~~~------~----~---~Dl~~~~~~~~~i~~~----~~D~Vih~A   62 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG--NLIALDVHSKE------F----C---GDFSNPKGVAETVRKL----RPDVIVNAA   62 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS--EEEEECTTCSS------S----C---CCTTCHHHHHHHHHHH----CCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC--CEEEEECCCcc------c----c---CcCCCHHHHHHHHHHc----CCCEEEEec
Confidence            4899999 999999999888776  46666554322      1    0   1222346666666543    689999998


Q ss_pred             cch
Q psy1413         398 GIE  400 (408)
Q Consensus       398 g~~  400 (408)
                      |..
T Consensus        63 a~~   65 (298)
T d1n2sa_          63 AHT   65 (298)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            743

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.08  E-value=0.065  Score=49.18  Aligned_cols=34  Identities=29%  Similarity=0.398  Sum_probs=30.7

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      +.+|||+|+||+|..+++.+.+.|..++.++|..
T Consensus        37 ~~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          37 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HCCEEEECSSTTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             cCeEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence            3679999999999999999999999999999754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=92.08  E-value=0.58  Score=36.71  Aligned_cols=42  Identities=14%  Similarity=0.126  Sum_probs=36.4

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMG  361 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g  361 (408)
                      .+-++|.|.+|..+++-+...|.+ |++.+|+.++.+.+.+.+
T Consensus         4 nIg~IGlG~MG~~mA~~L~~~G~~-V~v~dr~~~~~~~l~~~~   45 (176)
T d2pgda2           4 DIALIGLAVMGQNLILNMNDHGFV-VCAFNRTVSKVDDFLANE   45 (176)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCC-EEEECSSTHHHHHHHHTT
T ss_pred             cEEEEeEhHHHHHHHHHHHHCCCe-EEEEcCCHHHHHHHHHhc
Confidence            478899999999999999999997 899999999988775543

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.94  E-value=0.54  Score=41.59  Aligned_cols=57  Identities=18%  Similarity=0.302  Sum_probs=44.1

Q ss_pred             hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEec--ChhhHHHHHHcCCCeEE
Q psy1413         310 RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDI--LEHKLKTAKEMGADATV  366 (408)
Q Consensus       310 ~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~--~~~~~~~~~~~ga~~~i  366 (408)
                      +...+++..+++...+|..|.+++..++.+|.+.++++..  ++.|.+.++.+||+.+.
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~  148 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR  148 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEE
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEE
Confidence            3344566666555555999999999999999998877764  46788889999998765

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.90  E-value=0.28  Score=37.53  Aligned_cols=40  Identities=28%  Similarity=0.442  Sum_probs=33.6

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCC-CeEEEEecChhhH
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGA-SRVVITDILEHKL  354 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga-~~vv~~~~~~~~~  354 (408)
                      +.+.++.|+|+|.+|..++..+...|. ..++++++++++.
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~   44 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKA   44 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccc
Confidence            455789999999999999999998874 6799999988773

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=91.72  E-value=0.013  Score=39.89  Aligned_cols=27  Identities=11%  Similarity=0.154  Sum_probs=24.3

Q ss_pred             cCCeEEEEc-cCccccccccccccccCc
Q psy1413         101 CGSDVHYLT-HGQIGDFRLSDPMIVGHE  127 (408)
Q Consensus       101 ~g~~vlv~g-~G~vG~~~i~~a~~~G~~  127 (408)
                      ++++++|.| +|++|.+++|+++.+|++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~   58 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQ   58 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCC
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCe
Confidence            477899976 799999999999999998

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=91.61  E-value=0.23  Score=38.54  Aligned_cols=72  Identities=25%  Similarity=0.283  Sum_probs=44.4

Q ss_pred             EEEEEecchhHH-HHHHHHHHhCCCeEEEE-ecChh--hHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         319 KVLITGAGPIGL-VTLLTARALGASRVVIT-DILEH--KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       319 ~~lv~G~G~~G~-~~~~~~~~~Ga~~vv~~-~~~~~--~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      ++.|+|+|.+|. .++++++....-.++++ +|+.+  +..+++++|.....        +...+ +.+.....++|+||
T Consensus         6 rvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--------~~~d~-l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           6 KVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--------AGVEG-LIKLPEFADIDFVF   76 (157)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--------SHHHH-HHHSGGGGGEEEEE
T ss_pred             EEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--------cceee-eeecccccccCEEE
Confidence            578999999997 46788876654446665 55543  34667777765431        22222 22222234689999


Q ss_pred             Ecccc
Q psy1413         395 DCSGI  399 (408)
Q Consensus       395 d~~g~  399 (408)
                      .++..
T Consensus        77 ~ATpa   81 (157)
T d1nvmb1          77 DATSA   81 (157)
T ss_dssp             ECSCH
T ss_pred             EcCCc
Confidence            98764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=91.57  E-value=1.1  Score=34.08  Aligned_cols=76  Identities=17%  Similarity=0.198  Sum_probs=51.0

Q ss_pred             hccCcCCCCEEEEEec-chhHHHHHHHHHHh-CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413         310 RRAGVTLGSKVLITGA-GPIGLVTLLTARAL-GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG  387 (408)
Q Consensus       310 ~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~-Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~  387 (408)
                      .+..++..+.+++.-. -..-..++..++.+ +..++++...+++..+.++++|++.++++..     ...+.+.+...+
T Consensus        65 ~~a~i~~a~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~~-----~~~~~l~~~l~~  139 (153)
T d1id1a_          65 KKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQL-----FGSEILARVLNG  139 (153)
T ss_dssp             HHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHHTTCCSEEECHHH-----HHHHHHHHHHTT
T ss_pred             HHhccccCCEEEEccccHHHHHHHHHHHHHhCCCCceEEEEcCHHHHHHHHHCCCCEEECHHH-----HHHHHHHHHhCc
Confidence            4445566666666543 55667788888876 4446888888888899999999999998643     334444444434


Q ss_pred             CCC
Q psy1413         388 EQP  390 (408)
Q Consensus       388 ~~~  390 (408)
                      ..+
T Consensus       140 ~~v  142 (153)
T d1id1a_         140 EEI  142 (153)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            444

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.41  E-value=0.25  Score=40.89  Aligned_cols=47  Identities=30%  Similarity=0.382  Sum_probs=39.5

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGAD  363 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~  363 (408)
                      .+.+++|.|-|.+|..+++++...|++ +++++.+..+.+.+. ..|+.
T Consensus        38 ~g~~v~IqG~GnVG~~~a~~L~~~Gak-vv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          38 EGLAVSVQGLGNVAKALCKKLNTEGAK-LVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEeecccHHHHHHHHHhcCCc
Confidence            568999999999999999999999998 888888888876654 45654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=91.41  E-value=0.49  Score=39.95  Aligned_cols=33  Identities=27%  Similarity=0.334  Sum_probs=29.3

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      +++||+|+ |-+|..++..+...|.+ |++++|+.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~-V~~l~R~~   37 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHP-TFLLVRES   37 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCe-EEEEECCC
Confidence            57999999 99999999999999987 88888864

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.31  E-value=0.026  Score=49.56  Aligned_cols=31  Identities=29%  Similarity=0.348  Sum_probs=27.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEec
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDI  349 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~  349 (408)
                      +++||+|+ |-+|..+++.+...|.+ |+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~-V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHE-VTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeC
Confidence            57999999 99999999999999987 888875

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.26  E-value=0.28  Score=38.03  Aligned_cols=74  Identities=28%  Similarity=0.322  Sum_probs=51.4

Q ss_pred             CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         313 GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       313 ~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      .+-.+++++|.|=|-+|.-+++.++.+|++ |+++..++-+.=++.--|.. +         ..+    .++.  +..|+
T Consensus        19 ~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~-V~V~E~DPi~alqA~mdGf~-v---------~~~----~~a~--~~aDi   81 (163)
T d1v8ba1          19 FLISGKIVVICGYGDVGKGCASSMKGLGAR-VYITEIDPICAIQAVMEGFN-V---------VTL----DEIV--DKGDF   81 (163)
T ss_dssp             CCCTTSEEEEECCSHHHHHHHHHHHHHTCE-EEEECSCHHHHHHHHTTTCE-E---------CCH----HHHT--TTCSE
T ss_pred             ceecCCEEEEecccccchhHHHHHHhCCCE-EEEEecCchhhHHHHhcCCc-c---------Cch----hHcc--ccCcE
Confidence            346778888888899999999999999998 99898888654333323432 1         112    2222  35688


Q ss_pred             EEEcccchhhh
Q psy1413         393 TIDCSGIESTI  403 (408)
Q Consensus       393 i~d~~g~~~~~  403 (408)
                      ++-++|..+.+
T Consensus        82 ~vTaTGn~~vI   92 (163)
T d1v8ba1          82 FITCTGNVDVI   92 (163)
T ss_dssp             EEECCSSSSSB
T ss_pred             EEEcCCCCccc
Confidence            88888876543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.16  E-value=0.075  Score=45.51  Aligned_cols=34  Identities=24%  Similarity=0.373  Sum_probs=30.0

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      +++|+|+|+|.-|++++..|+..|.+ |.++++++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~~-V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGLN-VTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSCE-EEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence            46899999999999999999999997 88887653

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=91.06  E-value=0.14  Score=41.04  Aligned_cols=39  Identities=23%  Similarity=0.413  Sum_probs=33.7

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA  357 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~  357 (408)
                      +++.|+|+|.+|...+.++...|.+ |++.+++++.++.+
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~~-V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGTP-ILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTCC-EEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCe-EEEEECCHHHHhhh
Confidence            5689999999999999999999998 99999998776543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.04  E-value=0.48  Score=41.42  Aligned_cols=37  Identities=8%  Similarity=-0.052  Sum_probs=30.1

Q ss_pred             CCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecChhhH
Q psy1413         317 GSKVLITGA---GPIGLVTLLTARALGASRVVITDILEHKL  354 (408)
Q Consensus       317 ~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~  354 (408)
                      ++..||+|+   .|+|+.+++.+...|++ |++..++....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~-V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVK-IIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCE-EEEEeCchhhh
Confidence            467899994   49999999999999998 88777765543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.98  E-value=0.13  Score=42.83  Aligned_cols=35  Identities=31%  Similarity=0.341  Sum_probs=30.7

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .+..+|+|+|+|..|++++..|..+|.+ |.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~~-V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGYS-VHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCCC-EEEEeCC
Confidence            4556899999999999999999999997 8888764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.93  E-value=0.39  Score=41.99  Aligned_cols=77  Identities=16%  Similarity=0.098  Sum_probs=47.0

Q ss_pred             EE-EEEec-chhHHHHHHHHHHhCCCeEEEEecChh-----hHHHH-----HHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413         319 KV-LITGA-GPIGLVTLLTARALGASRVVITDILEH-----KLKTA-----KEMGADATVLIDRNHSLEEISTHIIELLQ  386 (408)
Q Consensus       319 ~~-lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-----~~~~~-----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~  386 (408)
                      ++ ||+|+ |-+|..+++.+...|.+ |++++|...     +.+.+     .......-+...|..+.+.+.+.+.+.  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~-V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYE-VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCE-EEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc--
Confidence            46 99999 99999999999999997 998988532     11111     111122223333444455555555443  


Q ss_pred             CCCCceEEEcccch
Q psy1413         387 GEQPDKTIDCSGIE  400 (408)
Q Consensus       387 ~~~~d~i~d~~g~~  400 (408)
                        ..+.++.+.+..
T Consensus        79 --~~~~v~~~~a~~   90 (347)
T d1t2aa_          79 --KPTEIYNLGAQS   90 (347)
T ss_dssp             --CCSEEEECCSCC
T ss_pred             --ccceeeeeeecc
Confidence              577888776643

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.82  E-value=0.2  Score=44.39  Aligned_cols=77  Identities=19%  Similarity=0.134  Sum_probs=48.3

Q ss_pred             CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      ..+-++||+|| |-+|..+++.+...|.. |+++++...+... ........ +.-+.   .+.+......   +++|.|
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~-V~~~d~~~~~~~~-~~~~~~~~-~~~D~---~~~~~~~~~~---~~~d~V   83 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHY-VIASDWKKNEHMT-EDMFCDEF-HLVDL---RVMENCLKVT---EGVDHV   83 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCSSSC-GGGTCSEE-EECCT---TSHHHHHHHH---TTCSEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCE-EEEEeCCCccchh-hhcccCcE-EEeec---hhHHHHHHHh---hcCCeE
Confidence            45678999999 99999999999999986 8888764332111 11222222 22232   3333333322   479999


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      +++++..
T Consensus        84 ih~a~~~   90 (363)
T d2c5aa1          84 FNLAADM   90 (363)
T ss_dssp             EECCCCC
T ss_pred             eeccccc
Confidence            9987644

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.81  E-value=0.12  Score=43.80  Aligned_cols=33  Identities=30%  Similarity=0.446  Sum_probs=29.1

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      .|+|+|+|..|++++.+++..|...|.++.+++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            489999999999999999999986688888764

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=90.79  E-value=0.1  Score=43.54  Aligned_cols=33  Identities=21%  Similarity=0.434  Sum_probs=28.8

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      .|+|+|+|..|++++..|+..|.+.|.++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            389999999999999999999986698888753

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.77  E-value=0.13  Score=40.75  Aligned_cols=41  Identities=15%  Similarity=0.218  Sum_probs=33.2

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA  357 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~  357 (408)
                      -.++++||+|+||.+++++..+.  +.++|.++.|+.+|.+.+
T Consensus        16 ~~~k~vlIlGaGG~arai~~aL~--~~~~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          16 VKDKNIVIYGAGGAARAVAFELA--KDNNIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHT--SSSEEEEECSSHHHHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHc--cccceeeehhhhhHHHHH
Confidence            46689999999999998887764  445799999998887654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=90.76  E-value=0.38  Score=40.91  Aligned_cols=73  Identities=14%  Similarity=0.166  Sum_probs=46.9

Q ss_pred             EEEEec-chhHHHHHHHHHHhCCCeEEEEec--ChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         320 VLITGA-GPIGLVTLLTARALGASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       320 ~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~--~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      +||+|| |-+|..+++.+...|...|+++++  +..+...+.+.-....++.      ++....+.....-..++.++.+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~   75 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDK------EDFLIQIMAGEEFGDVEAIFHE   75 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEH------HHHHHHHHTTCCCSSCCEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccc------hHHHHHHhhhhcccchhhhhhh
Confidence            789999 999999999999999866888763  3333444444433333332      4444444444444567788876


Q ss_pred             cc
Q psy1413         397 SG  398 (408)
Q Consensus       397 ~g  398 (408)
                      .+
T Consensus        76 aa   77 (307)
T d1eq2a_          76 GA   77 (307)
T ss_dssp             CS
T ss_pred             cc
Confidence            54

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=90.74  E-value=0.031  Score=45.08  Aligned_cols=34  Identities=29%  Similarity=0.383  Sum_probs=28.5

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .+..++|+|+|+.|++++.++.++|.+ ++++.+.
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~~-v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANLQ-PVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTCC-CEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCc-eEEEEee
Confidence            345699999999999999999999998 6666653

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=90.59  E-value=0.14  Score=39.34  Aligned_cols=33  Identities=6%  Similarity=-0.017  Sum_probs=25.4

Q ss_pred             CCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC
Q psy1413          25 SDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE   59 (408)
Q Consensus        25 ~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~   59 (408)
                      +.+-++..+++|+|++  |++++|++||+|.....
T Consensus        58 ~~g~~~~g~~vg~Vv~--S~~~~f~~GD~V~g~~g   90 (147)
T d1v3va1          58 KEGAVMMGQQVARVVE--SKNSAFPAGSIVLAQSG   90 (147)
T ss_dssp             CTTSBCCCCEEEEEEE--ESCTTSCTTCEEEECCC
T ss_pred             ccCCccccceEEEEEE--eCCCcccCCCEEEEccC
Confidence            3344456689999998  77889999999986543

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.56  E-value=0.2  Score=38.66  Aligned_cols=37  Identities=24%  Similarity=0.288  Sum_probs=32.1

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ..++.|+|+|||..|.-++..+.++|++.|.++.|.+
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            4457899999999999999999999999888887653

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.55  E-value=0.13  Score=42.67  Aligned_cols=35  Identities=34%  Similarity=0.379  Sum_probs=31.0

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ....+++|+|+|+-|+.++..++.+|.+ +.+++++
T Consensus        47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~-v~l~E~~   81 (233)
T d1djqa3          47 KNKDSVLIVGAGPSGSEAARVLMESGYT-VHLTDTA   81 (233)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECSS
T ss_pred             cCCceEEEEcccHHHHHHHHHHHHhccc-eeeEeec
Confidence            5668899999999999999999999997 7878764

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.55  E-value=0.11  Score=44.53  Aligned_cols=32  Identities=34%  Similarity=0.406  Sum_probs=28.9

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      .|+|+|+|+.|++++..++..|.+ |+++++++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~~-v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGID-NVILERQT   35 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTCC-EEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence            489999999999999999999997 88888764

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.44  E-value=0.17  Score=37.01  Aligned_cols=32  Identities=22%  Similarity=0.161  Sum_probs=26.2

Q ss_pred             CEEEEEecchhHHHHHHHHHHh---CCCeEEEEecC
Q psy1413         318 SKVLITGAGPIGLVTLLTARAL---GASRVVITDIL  350 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~---Ga~~vv~~~~~  350 (408)
                      ++++|+|+|.+|..+++++..+   |.+ |.++.++
T Consensus        19 ~~v~IiGgG~ig~E~A~~l~~~~~~g~~-Vtli~~~   53 (117)
T d1feca2          19 KRALCVGGGYISIEFAGIFNAYKARGGQ-VDLAYRG   53 (117)
T ss_dssp             SEEEEECSSHHHHHHHHHHHHHSCTTCE-EEEEESS
T ss_pred             CeEEEECCChHHHHHHHHhHhhcccccc-cceeccc
Confidence            6899999999999999988766   555 7777665

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.15  E-value=0.71  Score=40.28  Aligned_cols=77  Identities=22%  Similarity=0.213  Sum_probs=48.3

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC----------hhhHHHHHHcC--CCeEEecCCCCChHHHHHHHHHH
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITDIL----------EHKLKTAKEMG--ADATVLIDRNHSLEEISTHIIEL  384 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~----------~~~~~~~~~~g--a~~~i~~~~~~~~~~~~~~~~~~  384 (408)
                      +++||+|+ |-+|..+++.+...|.. |+.+++.          .++.+..+.+.  --.++ ..|..+.+.+++.+.. 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~-V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~l~~~~~~-   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYL-PVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE-EMDILDQGALQRLFKK-   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCC-EEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEE-ECCTTCHHHHHHHHHH-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCE-EEEEECCCccccccccchHHHHHHHHhcCCCcEEE-Eeeccccccccccccc-
Confidence            68999999 99999999999999976 8777531          22233333322  12233 2333344555554433 


Q ss_pred             hcCCCCceEEEcccch
Q psy1413         385 LQGEQPDKTIDCSGIE  400 (408)
Q Consensus       385 ~~~~~~d~i~d~~g~~  400 (408)
                         ...++++++++..
T Consensus        80 ---~~~~~i~h~Aa~~   92 (346)
T d1ek6a_          80 ---YSFMAVIHFAGLK   92 (346)
T ss_dssp             ---CCEEEEEECCSCC
T ss_pred             ---ccccccccccccc
Confidence               4678888887744

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=90.12  E-value=1.1  Score=34.03  Aligned_cols=38  Identities=26%  Similarity=0.491  Sum_probs=32.5

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhC-CCeEEEEecChhhH
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALG-ASRVVITDILEHKL  354 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~G-a~~vv~~~~~~~~~  354 (408)
                      ..++.|+|+|.+|..++..+...| +..++++|+++++.
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            457999999999999999999887 46799999988664

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.77  E-value=0.34  Score=37.21  Aligned_cols=44  Identities=14%  Similarity=0.208  Sum_probs=34.7

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGAD  363 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~  363 (408)
                      ++.++|+|-+|.++++-+...|.+ +++.+|+.++.+.+ +++|..
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~~-i~v~~r~~~~~~~l~~~~g~~   46 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPHE-LIISGSSLERSKEIAEQLALP   46 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSCE-EEEECSSHHHHHHHHHHHTCC
T ss_pred             EEEEEeccHHHHHHHHHHHhCCCe-EEEEcChHHhHHhhcccccee
Confidence            467889999999999977767765 88888998887665 567754

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=89.62  E-value=0.044  Score=43.91  Aligned_cols=148  Identities=21%  Similarity=0.308  Sum_probs=112.3

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.. ++.++|++.+.++++.+.++++++.++..+..+.   ....++..+|+|+.|+|..+|...+.++.         
T Consensus        12 pl~i-~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~---~~~~~P~i~GhE~~G~V~~vG~~V~~~~v---------   78 (179)
T d1uufa1          12 PLEP-MDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW---AGTVYPCVPGHEIVGRVVAVGDQVEKYAP---------   78 (179)
T ss_dssp             CCEE-EECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTT---SCCCSSBCCCCCEEEEEEEECTTCCSCCT---------
T ss_pred             CCEE-EEecCCCCCCCEEEEEEEEECCCCCcceeeeeee---ccccccccccccccccchhhccccccCCC---------
Confidence            3566 6778999999999999999999999876542211   22467888999999999999976554444         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        79 -------------------------------------------------------------------------------G   79 (179)
T d1uufa1          79 -------------------------------------------------------------------------------G   79 (179)
T ss_dssp             -------------------------------------------------------------------------------T
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           8


Q ss_pred             CceeecCC-CcccccccccCCccccccceeecccC-------CCCccceeEEeeccceeeeCCCCCCcccccccchhhhh
Q psy1413         234 DRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCATP-------PDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVG  305 (408)
Q Consensus       234 ~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~  305 (408)
                      |+|.+.+. .+|++|.+|.+|++++|.+....+..       ..+|+|+||++++++.++++|+...  .++...++.++
T Consensus        80 drV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~--~~~~a~~l~~a  157 (179)
T d1uufa1          80 DLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADI--EMIRADQINEA  157 (179)
T ss_dssp             CEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCE--EEECGGGHHHH
T ss_pred             CEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCc--ChhHhchhHHH
Confidence            99987775 58999999999999999986543222       2469999999999999999996543  33344566777


Q ss_pred             hhhhhccCcC
Q psy1413         306 VHACRRAGVT  315 (408)
Q Consensus       306 ~~~~~~~~~~  315 (408)
                      ++++.+..++
T Consensus       158 ~~a~~~a~v~  167 (179)
T d1uufa1         158 YERMLRGDVK  167 (179)
T ss_dssp             HHHHHTTCSS
T ss_pred             HHHHHHhCcc
Confidence            8877554443

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.61  E-value=0.19  Score=37.04  Aligned_cols=36  Identities=22%  Similarity=0.188  Sum_probs=30.7

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      +....++|+|+|.+|+.+++.+..+|.+ |.++.+++
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~~-Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGYH-VKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTCE-EEEECSSS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccce-EEEEeccc
Confidence            3457899999999999999999999997 77777653

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=89.47  E-value=0.32  Score=37.52  Aligned_cols=41  Identities=24%  Similarity=0.230  Sum_probs=34.6

Q ss_pred             cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhH
Q psy1413         314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKL  354 (408)
Q Consensus       314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~  354 (408)
                      .+...++.|+|+|.+|..++.++...+...+++++.++++.
T Consensus         4 ~~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           4 VQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             CSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            35567899999999999999999988877799999887654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.46  E-value=0.19  Score=43.43  Aligned_cols=36  Identities=28%  Similarity=0.374  Sum_probs=30.8

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ....+|+|+|+|..|++++..|+..|.+ |.++++++
T Consensus        28 ~~pkkV~IIGaG~aGLsaA~~L~~~G~~-V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGAGMAGLSAAYVLAGAGHQ-VTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECCBHHHHHHHHHHHHHTCE-EEEECSSS
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence            3446899999999999999999999987 88887653

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=89.43  E-value=0.22  Score=38.82  Aligned_cols=36  Identities=22%  Similarity=0.297  Sum_probs=29.8

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCC-eEEEEecCh
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGAS-RVVITDILE  351 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~-~vv~~~~~~  351 (408)
                      .+++++|+|+|..|+.+++.++.++.+ .|.++++++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            367899999999999999999998864 477776653

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.35  E-value=0.43  Score=38.21  Aligned_cols=36  Identities=19%  Similarity=0.160  Sum_probs=31.3

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChh
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEH  352 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~  352 (408)
                      .+.++.|+|.|.+|+.++++++.+|.+ ++..++...
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~~-v~~~d~~~~   81 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDMD-IDYFDTHRA   81 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCE-EEEECSSCC
T ss_pred             cccceEEeecccchHHHHHHHHhhccc-ccccccccc
Confidence            468999999999999999999999998 787876543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.16  E-value=0.25  Score=36.83  Aligned_cols=76  Identities=13%  Similarity=0.098  Sum_probs=53.5

Q ss_pred             EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413         319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS  397 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~  397 (408)
                      ++.|+|+ |-+|+++++++...|..-+..++++...  .+  ..+|.+||+..   ++...+.++... ..+..+|+-++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--~~--~~~DVvIDFS~---p~~~~~~l~~~~-~~~~p~ViGTT   73 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--EL--DSPDVVIDFSS---PEALPKTVDLCK-KYRAGLVLGTT   73 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--EC--SCCSEEEECSC---GGGHHHHHHHHH-HHTCEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--Hh--ccCCEEEEecC---HHHHHHHHHHHH-hcCCCEEEEcC
Confidence            4789998 9999999999999998855555543321  11  24899999876   455566666554 34678899988


Q ss_pred             cchhh
Q psy1413         398 GIEST  402 (408)
Q Consensus       398 g~~~~  402 (408)
                      |-...
T Consensus        74 G~~~~   78 (128)
T d1vm6a3          74 ALKEE   78 (128)
T ss_dssp             SCCHH
T ss_pred             CCCHH
Confidence            85443

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.99  E-value=0.17  Score=38.78  Aligned_cols=34  Identities=21%  Similarity=0.446  Sum_probs=29.2

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEec
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDI  349 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~  349 (408)
                      -.+.++||+|||.+|..-++.+...|++ |.+++.
T Consensus        11 l~gkrvLViGgG~va~~ka~~Ll~~GA~-VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGGGEVGLTRLYKLMPTGCK-LTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEESHHHHHHHHHHGGGTCE-EEEEEE
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence            3568899999999999999999999998 666643

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=88.98  E-value=0.16  Score=40.09  Aligned_cols=29  Identities=28%  Similarity=0.438  Sum_probs=25.9

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEec
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDI  349 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~  349 (408)
                      ++|+|+|+.|++++..+..+|.+ ++++++
T Consensus         4 ViIIGgGpaGl~AAi~aar~G~~-v~iie~   32 (184)
T d1fl2a1           4 VLIVGSGPAGAAAAIYSARKGIR-TGLMGE   32 (184)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCC-EEEECS
T ss_pred             EEEECcCHHHHHHHHHHHHcCCe-EEEEEE
Confidence            78899999999999999999998 666764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.98  E-value=0.56  Score=32.32  Aligned_cols=67  Identities=22%  Similarity=0.318  Sum_probs=46.1

Q ss_pred             EEEEEecchhHHH-HHHHHHHhCCCeEEEEecCh-hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413         319 KVLITGAGPIGLV-TLLTARALGASRVVITDILE-HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC  396 (408)
Q Consensus       319 ~~lv~G~G~~G~~-~~~~~~~~Ga~~vv~~~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~  396 (408)
                      ++-++|-||.|.+ +|++++..|.. |-..|+.+ ...+.+++.|+.....++.    +.+          ++.|.|+=+
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~~-VsGSD~~~~~~t~~L~~~Gi~i~~gh~~----~~i----------~~~d~vV~S   67 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGND-VYGSNIEETERTAYLRKLGIPIFVPHSA----DNW----------YDPDLVIKT   67 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE-EEEECSSCCHHHHHHHHTTCCEESSCCT----TSC----------CCCSEEEEC
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCCe-EEEEeCCCChhHHHHHHCCCeEEeeecc----ccc----------CCCCEEEEe
Confidence            4556677888864 58999999997 99998775 4456789999875443222    111          367888877


Q ss_pred             ccch
Q psy1413         397 SGIE  400 (408)
Q Consensus       397 ~g~~  400 (408)
                      ++.+
T Consensus        68 sAI~   71 (89)
T d1j6ua1          68 PAVR   71 (89)
T ss_dssp             TTCC
T ss_pred             cCcC
Confidence            6644

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=88.90  E-value=0.17  Score=42.43  Aligned_cols=32  Identities=34%  Similarity=0.431  Sum_probs=28.4

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      -++|+|+|+.|++++..|...|.+ |+++++++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~~-V~vlEk~~   37 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGKS-VTVFDNGK   37 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCCc-EEEEecCC
Confidence            378999999999999999999987 88898764

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.65  E-value=0.2  Score=40.78  Aligned_cols=30  Identities=33%  Similarity=0.494  Sum_probs=26.7

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ++|+|+|+.|+.++..+..+|.+ |+++++.
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~k-V~vie~~   35 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGFK-TTCIEKR   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCC-EEEEECS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCc-EEEEEec
Confidence            78899999999999999999998 7777654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=88.61  E-value=0.19  Score=41.89  Aligned_cols=30  Identities=37%  Similarity=0.615  Sum_probs=27.1

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ++|+|+|+.|++++..+...|.+ |++++++
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~~-V~liEk~   34 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGAN-VLLLDKG   34 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCC-EEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCc-EEEEeCC
Confidence            78999999999999999999998 8888765

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=88.11  E-value=1.2  Score=39.75  Aligned_cols=58  Identities=22%  Similarity=0.114  Sum_probs=44.2

Q ss_pred             CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEec--ChhhHHHHHHcCCCeEEecCC
Q psy1413         313 GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDI--LEHKLKTAKEMGADATVLIDR  370 (408)
Q Consensus       313 ~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~--~~~~~~~~~~~ga~~~i~~~~  370 (408)
                      .++++.+++-.-+|..|++++..++.+|.+.++++..  +..|.+.++.+||+.++....
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~~~  199 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEA  199 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTC
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeecCcc
Confidence            4566666433344999999999999999997777764  467778889999988776544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.10  E-value=0.22  Score=40.40  Aligned_cols=69  Identities=17%  Similarity=0.171  Sum_probs=42.5

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCC-eEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGAS-RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID  395 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~-~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d  395 (408)
                      +++||+|| |-+|..+++.+...|.. +|+...|+...        ...-+....    .+..+....+  ...+|.+|+
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~--------~~~~~~~~~----~d~~~~~~~~--~~~~d~vi~   68 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLDNPV----GPLAELLPQL--DGSIDTAFC   68 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEECCB----SCHHHHGGGC--CSCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh--------hcccccccc----cchhhhhhcc--ccchheeee
Confidence            68999999 99999999999988864 46666554321        011111111    2222222222  346899999


Q ss_pred             cccch
Q psy1413         396 CSGIE  400 (408)
Q Consensus       396 ~~g~~  400 (408)
                      |+|..
T Consensus        69 ~~g~~   73 (212)
T d2a35a1          69 CLGTT   73 (212)
T ss_dssp             CCCCC
T ss_pred             eeeee
Confidence            98754

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=87.86  E-value=0.41  Score=36.67  Aligned_cols=39  Identities=26%  Similarity=0.313  Sum_probs=33.6

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhH
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKL  354 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~  354 (408)
                      |..++.|+|+|.+|..++.++...+...++++++++++.
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~   40 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP   40 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence            456899999999999999999988988899999877653

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=87.79  E-value=1.5  Score=38.61  Aligned_cols=79  Identities=18%  Similarity=0.174  Sum_probs=47.3

Q ss_pred             CEEEEEec-chhHHHHHHHHH-HhCCCeEEEEec---C-------hhhH---HHHHHcC--------CCeEEecCCCCCh
Q psy1413         318 SKVLITGA-GPIGLVTLLTAR-ALGASRVVITDI---L-------EHKL---KTAKEMG--------ADATVLIDRNHSL  374 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~-~~Ga~~vv~~~~---~-------~~~~---~~~~~~g--------a~~~i~~~~~~~~  374 (408)
                      -+|||+|+ |-+|..+++.+. ..|.. |+++++   +       ..+.   ..++...        -...+...|..+.
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~-V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHS-VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCE-EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCE-EEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            36999999 999999888665 45665 888763   1       1111   1222211        1122334454555


Q ss_pred             HHHHHHHHHHhcCCCCceEEEcccch
Q psy1413         375 EEISTHIIELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       375 ~~~~~~~~~~~~~~~~d~i~d~~g~~  400 (408)
                      +.+.+.++..   +++|+||++++..
T Consensus        82 ~~l~~~~~~~---~~~d~ViH~Aa~~  104 (383)
T d1gy8a_          82 DFLNGVFTRH---GPIDAVVHMCAFL  104 (383)
T ss_dssp             HHHHHHHHHS---CCCCEEEECCCCC
T ss_pred             HHhhhhhhcc---ceeehhhcccccc
Confidence            5666666543   5799999998743

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.79  E-value=0.87  Score=35.83  Aligned_cols=73  Identities=8%  Similarity=-0.015  Sum_probs=47.5

Q ss_pred             EEEEEecchhHHHHHHHHHHh-CCCeEE-EEecChhhHHHH-HHcCCC---eEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413         319 KVLITGAGPIGLVTLLTARAL-GASRVV-ITDILEHKLKTA-KEMGAD---ATVLIDRNHSLEEISTHIIELLQGEQPDK  392 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~-Ga~~vv-~~~~~~~~~~~~-~~~ga~---~~i~~~~~~~~~~~~~~~~~~~~~~~~d~  392 (408)
                      ++.|+|+|.+|...++.++.. +++ ++ +.+++.++.+.+ ++++..   .++        +++++.+.    ...+|+
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~-i~ai~d~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ll~----~~~iD~   69 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNAT-ISGVASRSLEKAKAFATANNYPESTKIH--------GSYESLLE----DPEIDA   69 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEE-EEEEECSSHHHHHHHHHHTTCCTTCEEE--------SSHHHHHH----CTTCCE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCE-EEEEEeCCccccccchhccccccceeec--------CcHHHhhh----ccccce
Confidence            478899999999988888776 555 55 457777776554 556632   222        33444443    347899


Q ss_pred             EEEcccchhhhh
Q psy1413         393 TIDCSGIESTIK  404 (408)
Q Consensus       393 i~d~~g~~~~~~  404 (408)
                      |+-|+....-.+
T Consensus        70 v~I~tp~~~h~~   81 (184)
T d1ydwa1          70 LYVPLPTSLHVE   81 (184)
T ss_dssp             EEECCCGGGHHH
T ss_pred             eeecccchhhcc
Confidence            998887654433

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.65  E-value=0.16  Score=38.47  Aligned_cols=35  Identities=23%  Similarity=0.154  Sum_probs=26.9

Q ss_pred             CCCCEEEEEecchhHHHHHHHHH----HhCCCeEEEEecC
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTAR----ALGASRVVITDIL  350 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~----~~Ga~~vv~~~~~  350 (408)
                      +..++++|+|+|.+|..++..+.    ..|.+ |.++.++
T Consensus        35 ~~~k~i~IvGgG~~G~E~A~~l~~~~~~~g~~-Vt~i~~~   73 (137)
T d1m6ia2          35 REVKSITIIGGGFLGSELACALGRKARALGTE-VIQLFPE   73 (137)
T ss_dssp             HHCSEEEEECCSHHHHHHHHHHHHHHHHHTCE-EEEECSS
T ss_pred             hcCCEEEEECCCHHHHHHHHHHHHHHHhcCCE-EEEeccc
Confidence            45679999999999988877663    46887 7777654

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=87.62  E-value=0.059  Score=43.90  Aligned_cols=166  Identities=24%  Similarity=0.368  Sum_probs=126.4

Q ss_pred             CCcceeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHh
Q psy1413          65 LSPILRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK  143 (408)
Q Consensus        65 ~~~~~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~  143 (408)
                      ...++..|. .+.. ++.++|.+.+.++++.+.++++++.++.+.. |   ....+++..+|+|+.|+|..+|+..+.++
T Consensus        10 KAav~~~~g~~l~i-~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~-G---~~~~~~P~i~GHE~~G~Vv~~G~~v~~~~   84 (198)
T d1p0fa1          10 KAAVAWEPHKPLSL-ETITVAPPKAHEVRIKILASGICGSDSSVLK-E---IIPSKFPVILGHEAVGVVESIGAGVTCVK   84 (198)
T ss_dssp             EEEEBSSTTSCCEE-EEEEECCCCTTEEEEEEEEEECCHHHHHHHT-T---SSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEccCCCCCEE-EEEECCCCCCCEEEEEEEEEEEecccceeee-e---ccccccccccceeeeeeeeecCcccccCc
Confidence            344566664 5888 7889999999999999999999999987753 2   22346788899999999999998655555


Q ss_pred             hccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCC
Q psy1413         144 ATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGA  223 (408)
Q Consensus       144 ~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~  223 (408)
                      .                                                                               
T Consensus        85 ~-------------------------------------------------------------------------------   85 (198)
T d1p0fa1          85 P-------------------------------------------------------------------------------   85 (198)
T ss_dssp             T-------------------------------------------------------------------------------
T ss_pred             C-------------------------------------------------------------------------------
Confidence            4                                                                               


Q ss_pred             CCceEEEEEcCceeecCCCcccccccccCCccccccceeecccC--------------------CCCccceeEEeeccce
Q psy1413         224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATP--------------------PDHGNLSRYYRHAADF  283 (408)
Q Consensus       224 ~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~~~~~~~~~~  283 (408)
                               +|+|++.+..+|+.|.+|.++++++|+...+.+..                    +.+|+|+||..+++..
T Consensus        86 ---------GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~  156 (198)
T d1p0fa1          86 ---------GDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIA  156 (198)
T ss_dssp             ---------TCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTS
T ss_pred             ---------CCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHH
Confidence                     99999999999999999999999999865443221                    1248999999999999


Q ss_pred             eeeCCCCCCcccccccchhhhhhhhhhccCcCCCCEEEEEecchhHHH
Q psy1413         284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLV  331 (408)
Q Consensus       284 ~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~  331 (408)
                      ++++|++++.+..+....   +.     ..+.++..+||.|+|++|++
T Consensus       157 ~~kip~~~~~~~~~~~~~---~~-----~~v~~~~~vlv~G~G~iGl~  196 (198)
T d1p0fa1         157 VAKIDPKINVNFLVSTKL---TL-----DQINKAFELLSSGQGVRSIM  196 (198)
T ss_dssp             EEEECTTSCGGGGEEEEE---CG-----GGHHHHHHHTTTSSCSEEEE
T ss_pred             EEECCCCCCHHHHHHhhc---ch-----hhcCCCCEEEEECCCcceEE
Confidence            999999998765443221   11     22334455788888888764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=87.61  E-value=0.27  Score=39.14  Aligned_cols=35  Identities=34%  Similarity=0.277  Sum_probs=31.5

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      .+.++.|+|.|.+|..++++++.+|++ |+..+++.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~~-v~~~d~~~   75 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGAQ-VRGFSRTP   75 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred             cCceEEEeccccccccceeeeeccccc-cccccccc
Confidence            468899999999999999999999997 88888764

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=87.50  E-value=2.2  Score=32.11  Aligned_cols=71  Identities=25%  Similarity=0.276  Sum_probs=48.1

Q ss_pred             CEEEEEecchhHHHHHHHHHHhC-CCeEEEEecChhhHH-----HHHH---cCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         318 SKVLITGAGPIGLVTLLTARALG-ASRVVITDILEHKLK-----TAKE---MGADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~G-a~~vv~~~~~~~~~~-----~~~~---~ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      +++.|+|+|.+|..++..+...| +..+++++.++++.+     ....   +.....+...+   .++          -+
T Consensus         2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~----------l~   68 (146)
T d1hyha1           2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAA----------LA   68 (146)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGG----------GT
T ss_pred             CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHH----------hc
Confidence            56889999999999999888887 567999999887642     2211   22333333322   121          25


Q ss_pred             CCceEEEcccchh
Q psy1413         389 QPDKTIDCSGIES  401 (408)
Q Consensus       389 ~~d~i~d~~g~~~  401 (408)
                      +.|+|+-+.|.+.
T Consensus        69 ~adiVVitaG~~~   81 (146)
T d1hyha1          69 DADVVISTLGNIK   81 (146)
T ss_dssp             TCSEEEECCSCGG
T ss_pred             cccEEEEeccccc
Confidence            7899999988653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.41  E-value=1  Score=33.18  Aligned_cols=60  Identities=17%  Similarity=0.241  Sum_probs=46.6

Q ss_pred             hccCcCCCCEEEEE-ecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413         310 RRAGVTLGSKVLIT-GAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID  369 (408)
Q Consensus       310 ~~~~~~~~~~~lv~-G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~  369 (408)
                      ....++..+.++.. ..-..-..++++++.+|..++++...+.+..+.++++|++.++++.
T Consensus        59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            34455666666654 3355667889999999999999888888888999999999999764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=87.41  E-value=0.31  Score=39.35  Aligned_cols=35  Identities=31%  Similarity=0.462  Sum_probs=30.8

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      .+.++.|+|-|.+|+.++++++.+|.+ |+..++..
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~~-V~~~d~~~   76 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGAK-VITYDIFR   76 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred             cCCeEEEecccccchhHHHhHhhhccc-ccccCccc
Confidence            357899999999999999999999997 88887653

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.31  E-value=0.28  Score=40.30  Aligned_cols=30  Identities=30%  Similarity=0.483  Sum_probs=26.9

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ++|+|+|+-|++++..+..+|.+ |+++++.
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~~-V~viE~~   38 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGLK-VAIVERY   38 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCe-EEEEecc
Confidence            78889999999999999999998 8888764

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.25  E-value=3.6  Score=34.80  Aligned_cols=56  Identities=20%  Similarity=0.222  Sum_probs=42.0

Q ss_pred             hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEec--ChhhHHHHHHcCCCeE
Q psy1413         310 RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDI--LEHKLKTAKEMGADAT  365 (408)
Q Consensus       310 ~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~--~~~~~~~~~~~ga~~~  365 (408)
                      +....+++.+++...+|..|.+++-.++.+|.+.++++..  ++.+.+.++.+|+..+
T Consensus        54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~  111 (302)
T d1fcja_          54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLV  111 (302)
T ss_dssp             HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceE
Confidence            4445666666555555999999999999999998777765  4566677788887655

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=87.15  E-value=0.25  Score=43.09  Aligned_cols=34  Identities=35%  Similarity=0.360  Sum_probs=29.8

Q ss_pred             CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ..+++|+|||..|+++|..+...|.+ |.++++++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~~-V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGHQ-VHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCE-EEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCCC-EEEEECCC
Confidence            46899999999999999999999987 88888664

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.14  E-value=0.28  Score=40.15  Aligned_cols=30  Identities=33%  Similarity=0.552  Sum_probs=26.5

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ++|+|+|+-|+.++..|..+|.+ |+++++.
T Consensus         8 viVIG~GpAGl~aA~~aa~~G~k-V~lie~~   37 (233)
T d1v59a1           8 VVIIGGGPAGYVAAIKAAQLGFN-TACVEKR   37 (233)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCc-EEEEEec
Confidence            68899999999999999999998 7777754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=87.09  E-value=0.27  Score=41.50  Aligned_cols=31  Identities=13%  Similarity=0.146  Sum_probs=27.9

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ++|+|+|..|++++..|..+|.+ |+++++.+
T Consensus         7 vvIIGaGi~Gls~A~~La~~G~~-V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGGGIIGSAIAYYLAKENKN-TALFESGT   37 (276)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCc-EEEEeCCC
Confidence            89999999999999999999987 88998753

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.90  E-value=0.3  Score=39.60  Aligned_cols=30  Identities=40%  Similarity=0.595  Sum_probs=26.5

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ++|+|+|+-|++++..+..+|.+ |+++.+.
T Consensus         6 viVIG~GpaGl~aA~~aar~G~k-V~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQK-VTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCE-EEEEecC
Confidence            68889999999999999999998 7777654

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=86.82  E-value=1.1  Score=35.21  Aligned_cols=81  Identities=15%  Similarity=0.132  Sum_probs=44.7

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEe-cCh-hhHHHHHHcCCCeEEecCCCCChHHHHH-------HHHHHhcCCC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITD-ILE-HKLKTAKEMGADATVLIDRNHSLEEIST-------HIIELLQGEQ  389 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~-~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~~-------~~~~~~~~~~  389 (408)
                      ++.|.|-|-+|+.+++.+....--.++.+. .++ .....+...+.......+.   ...+.+       .+....  .+
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~g~~~~~~--~~   77 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQS---IKKFEESGIPVAGTVEDLI--KT   77 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGG---HHHHHTTTCCCCCCHHHHH--HH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCcc---ceeccccceecCCchhhhh--hc
Confidence            478888899999999998876433366653 333 2334445555433322211   000000       011111  25


Q ss_pred             CceEEEcccchhhhh
Q psy1413         390 PDKTIDCSGIESTIK  404 (408)
Q Consensus       390 ~d~i~d~~g~~~~~~  404 (408)
                      +|+|+||+|.....+
T Consensus        78 vDiViecTG~f~~~e   92 (178)
T d1b7go1          78 SDIVVDTTPNGVGAQ   92 (178)
T ss_dssp             CSEEEECCSTTHHHH
T ss_pred             CCEEEECCCCcCCHH
Confidence            899999999765544

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=86.82  E-value=1.6  Score=36.97  Aligned_cols=59  Identities=14%  Similarity=0.253  Sum_probs=44.4

Q ss_pred             hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEec--ChhhHHHHHHcCCCeEEec
Q psy1413         310 RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDI--LEHKLKTAKEMGADATVLI  368 (408)
Q Consensus       310 ~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~--~~~~~~~~~~~ga~~~i~~  368 (408)
                      +....++..+++...+|..|++++..++.+|.+.+|++..  ++.|.+.++.+||..++..
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~  113 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVT  113 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEEC
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceee
Confidence            3344555666555556999999999999999998887765  4677788899999766543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=86.72  E-value=0.48  Score=37.79  Aligned_cols=40  Identities=23%  Similarity=0.151  Sum_probs=33.1

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHH
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKT  356 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~  356 (408)
                      .+.++.|+|.|.+|..+++.++.+|.+ |+..++.......
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~~-v~~~d~~~~~~~~   82 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDVH-LHYTDRHRLPESV   82 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTCE-EEEECSSCCCHHH
T ss_pred             cccceeeccccccchhhhhhhhccCce-EEEEeeccccccc
Confidence            467899999999999999999999998 8888875443333

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.66  E-value=0.31  Score=39.68  Aligned_cols=30  Identities=37%  Similarity=0.581  Sum_probs=27.0

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ++|+|+|+.|+.++..++.+|.+ |.++.+.
T Consensus         8 lvVIG~GpaGl~aA~~aa~~G~~-V~liE~~   37 (220)
T d1lvla1           8 LLIIGGGPGGYVAAIRAGQLGIP-TVLVEGQ   37 (220)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCC-EEEECSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCc-EEEEecC
Confidence            78999999999999999999998 8888754

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.56  E-value=0.34  Score=41.82  Aligned_cols=35  Identities=26%  Similarity=0.412  Sum_probs=29.9

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      +...+|+|+|+|.-|++++..|+..|.+ |.++..+
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~~-V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGMD-VTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTCE-EEEECSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCCC-EEEEeCC
Confidence            3456799999999999999999999997 8888654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=86.50  E-value=0.29  Score=39.59  Aligned_cols=34  Identities=29%  Similarity=0.387  Sum_probs=30.5

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .+.++.|+|.|.+|+.++++++.+|.+ |+..++.
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~~-v~~~d~~   77 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGAK-VIAYDPY   77 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSS
T ss_pred             cceeeeeeeccccccccccccccccee-eeccCCc
Confidence            357899999999999999999999998 8888875

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.31  E-value=0.31  Score=39.82  Aligned_cols=31  Identities=19%  Similarity=0.189  Sum_probs=27.8

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ++|+|+|.-|+++|..|...|.+ |.++++++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~~-V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGKK-VLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCC-EEEEcCCC
Confidence            68999999999999999999987 99998763

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.26  E-value=1.6  Score=33.91  Aligned_cols=83  Identities=18%  Similarity=0.153  Sum_probs=47.1

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEE-ecCh-hhHHHHHHcCCCeEEecCCCCChHHHHH-------HHHHHhcCCC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVIT-DILE-HKLKTAKEMGADATVLIDRNHSLEEIST-------HIIELLQGEQ  389 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~-~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~~-------~~~~~~~~~~  389 (408)
                      ++.|.|-|-+|+.+++.+....--.++.+ +.++ .....+..++.+......+  .......       .+.++  ..+
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~   79 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEE--FIPRFEKEGFEVAGTLNDL--LEK   79 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGG--GHHHHHHHTCCCSCBHHHH--HTT
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeeccccc--ceeeecccCccccchhhhh--hcc
Confidence            57889889999999988765432235544 3333 3445667777654432111  0111111       01111  137


Q ss_pred             CceEEEcccchhhhhh
Q psy1413         390 PDKTIDCSGIESTIKL  405 (408)
Q Consensus       390 ~d~i~d~~g~~~~~~~  405 (408)
                      +|+|+||+|.-.+.+.
T Consensus        80 vDvViEcTG~f~~~~~   95 (172)
T d2czca2          80 VDIIVDATPGGIGAKN   95 (172)
T ss_dssp             CSEEEECCSTTHHHHH
T ss_pred             CCEEEECCCCCCCHHH
Confidence            9999999997766543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.17  E-value=0.31  Score=41.22  Aligned_cols=30  Identities=23%  Similarity=0.523  Sum_probs=27.0

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      |+|+|+|..|++++..|..+|.+ |+++++.
T Consensus         6 vvIIGaGi~Gls~A~~La~~G~~-V~viE~~   35 (281)
T d2gf3a1           6 VIVVGAGSMGMAAGYQLAKQGVK-TLLVDAF   35 (281)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCC-EEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCc-EEEEeCC
Confidence            78999999999999999999998 8888764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.16  E-value=1.7  Score=37.55  Aligned_cols=33  Identities=39%  Similarity=0.248  Sum_probs=29.0

Q ss_pred             CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec
Q psy1413         316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI  349 (408)
Q Consensus       316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~  349 (408)
                      .-.++||+|+ |-+|..+++.+...|.+ |+.+++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~-V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQK-VVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCE-EEEEEC
Confidence            3468999999 99999999999999997 888875

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.02  E-value=0.32  Score=41.73  Aligned_cols=32  Identities=22%  Similarity=0.276  Sum_probs=28.2

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .|+|+|+|..|++++..+..+|.+.|.+++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            38999999999999999999998669889875

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.00  E-value=0.24  Score=42.75  Aligned_cols=31  Identities=23%  Similarity=0.372  Sum_probs=27.5

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      -|+|+|||..|+++|..+...|.+ |.+++++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~~-V~iiEk~   33 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNKK-VLVIEKR   33 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTCC-EEEECSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCCc-EEEEECC
Confidence            379999999999999999989987 8888765

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=85.90  E-value=0.25  Score=41.80  Aligned_cols=31  Identities=26%  Similarity=0.395  Sum_probs=27.9

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      +|+|+|+|.-|++++..++..|.+ |.+++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~-V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGTD-AVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTCC-EEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCCC-EEEEecC
Confidence            489999999999999999999997 8888765

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=85.70  E-value=0.24  Score=38.67  Aligned_cols=59  Identities=22%  Similarity=0.270  Sum_probs=44.9

Q ss_pred             eecCCeEEEEccCccccccccccccccC--------------------------------------cceeEEEccC---c
Q psy1413          99 GICGSDVHYLTHGQIGDFRLSDPMIVGH--------------------------------------EASGIVSKVG---A  137 (408)
Q Consensus        99 ~~~g~~vlv~g~G~vG~~~i~~a~~~G~--------------------------------------~~~~vv~~~g---~  137 (408)
                      ++...+++|+|+|-+|+.+++.|+.+|+                                      ++|.+|.++=   .
T Consensus        29 gv~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~  108 (168)
T d1pjca1          29 GVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR  108 (168)
T ss_dssp             TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred             CCCCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCc
Confidence            3467889999999999999999999987                                      3444444321   1


Q ss_pred             h------HHHHhhccCCcEEEEEccC
Q psy1413         138 K------VKHLKATRPGGCLVIVGAG  157 (408)
Q Consensus       138 ~------~~~~~~l~~gG~iv~~G~~  157 (408)
                      .      .+.++.+++|..|+.+..-
T Consensus       109 ~aP~lIt~~mv~~Mk~GSVIVDvaid  134 (168)
T d1pjca1         109 RAPILVPASLVEQMRTGSVIVDVAVD  134 (168)
T ss_dssp             SCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred             ccCeeecHHHHhhcCCCcEEEEeecC
Confidence            1      1789999999999999854

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=85.53  E-value=0.3  Score=38.53  Aligned_cols=41  Identities=20%  Similarity=0.167  Sum_probs=36.3

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMG  361 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g  361 (408)
                      +-|+|.|.+|..+++.+...|.+ |.+.+|+.++.+.+.+.+
T Consensus         4 IGvIGlG~MG~~ma~~L~~~G~~-V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           4 VGVVGLGVMGANLALNIAEKGFK-VAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCC-EEEECSSHHHHHHHHHHT
T ss_pred             EEEEeehHHHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHcC
Confidence            67889999999999999999998 999999999998876555

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=85.53  E-value=1.4  Score=33.37  Aligned_cols=75  Identities=12%  Similarity=0.125  Sum_probs=46.4

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHH-H---HHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLK-T---AKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT  393 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~---~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i  393 (408)
                      +.++|.|.|.+|..+++.+...|.. +++++.++++.. .   +...|... + +-+..+.+    .++++ +-..+|.+
T Consensus         4 nHiII~G~g~~g~~l~~~L~~~~~~-v~vId~d~~~~~~~~~~~~~~~~~v-i-~Gd~~d~~----~L~~a-~i~~a~~v   75 (153)
T d1id1a_           4 DHFIVCGHSILAINTILQLNQRGQN-VTVISNLPEDDIKQLEQRLGDNADV-I-PGDSNDSS----VLKKA-GIDRCRAI   75 (153)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCEE-E-ESCTTSHH----HHHHH-TTTTCSEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCC-EEEEeccchhHHHHHHHhhcCCcEE-E-EccCcchH----HHHHh-ccccCCEE
Confidence            3588889999999999999999987 777777765432 2   22234433 3 23322222    22332 23467888


Q ss_pred             EEcccch
Q psy1413         394 IDCSGIE  400 (408)
Q Consensus       394 ~d~~g~~  400 (408)
                      +-+++..
T Consensus        76 i~~~~~d   82 (153)
T d1id1a_          76 LALSDND   82 (153)
T ss_dssp             EECSSCH
T ss_pred             EEccccH
Confidence            8777654

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.48  E-value=0.4  Score=38.90  Aligned_cols=29  Identities=31%  Similarity=0.603  Sum_probs=26.1

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEec
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDI  349 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~  349 (408)
                      ++|+|+|+-|+.++..|.++|.+ |+++++
T Consensus         6 viIIGgGpAGl~aA~~aar~G~~-V~viE~   34 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGLK-TALIEK   34 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCC-EEEEEC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCe-EEEEec
Confidence            68889999999999999999998 777775

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.31  E-value=0.11  Score=40.99  Aligned_cols=158  Identities=30%  Similarity=0.489  Sum_probs=126.4

Q ss_pred             eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413          74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI  153 (408)
Q Consensus        74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~  153 (408)
                      .+.+ ++.++|.+.+.++++.+.++++++.++.....+.  .........+|+|+.|+|+.+|...+.++.         
T Consensus        12 pl~i-~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~--~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~v---------   79 (171)
T d1rjwa1          12 PLKI-KEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDW--PVKPKLPLIPGHEGVGIVEEVGPGVTHLKV---------   79 (171)
T ss_dssp             CCEE-EECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCS--SSCCCSSBCCCSCEEEEEEEECTTCCSCCT---------
T ss_pred             CcEE-EEeECCCCCCCeEEEEEEEeeccccceeeeeccc--ccccccccccCCEEEEEEEEecccccCcee---------
Confidence            3677 6788899999999999999999988765442221  123456677899999999999976544544         


Q ss_pred             EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413         154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC  233 (408)
Q Consensus       154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~  233 (408)
                                                                                                     +
T Consensus        80 -------------------------------------------------------------------------------G   80 (171)
T d1rjwa1          80 -------------------------------------------------------------------------------G   80 (171)
T ss_dssp             -------------------------------------------------------------------------------T
T ss_pred             -------------------------------------------------------------------------------e
Confidence                                                                                           8


Q ss_pred             CceeecCC-CcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhcc
Q psy1413         234 DRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRA  312 (408)
Q Consensus       234 ~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~  312 (408)
                      |+|.+.+. ..|+.|..|..+.++.|.+....|.. .+|+|+||..++++.++++|++++++.|+ +.+++++++++.+.
T Consensus        81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~~~~~~~~~~~~~  158 (171)
T d1rjwa1          81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS-VDGGYAEYCRAAADYVVKIPDNTIIEVQP-LEKINEVFDRMLKG  158 (171)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTT-BCCSSBSEEEEEGGGCEECCTTCCEEEEE-GGGHHHHHHHHHTT
T ss_pred             eEEeeccccccccccccccCCCcccccccccccee-ccCccccceEecHHHEEECCCCCCHHHHH-HHHHHHHHHHHHhc
Confidence            88877665 46899999999999999999888865 67999999999999999999999986554 56778888887665


Q ss_pred             CcCCCCEEEEEec
Q psy1413         313 GVTLGSKVLITGA  325 (408)
Q Consensus       313 ~~~~~~~~lv~G~  325 (408)
                      .+ +++++||+|.
T Consensus       159 ~~-~G~tVlViG~  170 (171)
T d1rjwa1         159 QI-NGRVVLTLED  170 (171)
T ss_dssp             CC-SSEEEEECCC
T ss_pred             CC-CCCEEEEeCC
Confidence            55 4899999985

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=85.18  E-value=0.38  Score=38.64  Aligned_cols=35  Identities=31%  Similarity=0.457  Sum_probs=31.0

Q ss_pred             CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      -.+.++.|+|.|.+|+.+++.++.+|.+ |+..++.
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~~-v~~~d~~   81 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGFN-VLFYDPY   81 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCE-EEEECTT
T ss_pred             eeCceEEEeccccccccceeeeeccccc-eeeccCc
Confidence            3568999999999999999999999998 8888765

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.96  E-value=0.093  Score=41.63  Aligned_cols=67  Identities=33%  Similarity=0.592  Sum_probs=49.9

Q ss_pred             eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhh
Q psy1413          75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA  144 (408)
Q Consensus        75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~  144 (408)
                      +.+ ++.++|.+.+.++++.+.++++++.++..+. |... .....+..+|+|+.|+|..+|+..+.++.
T Consensus        18 l~l-~evp~P~~~~~evlVkv~a~gic~~D~~~~~-G~~~-~~~~~P~i~GhE~~G~V~~~G~~v~~~~~   84 (175)
T d1llua1          18 LRI-EEVKVPLPGPGQVLVKIEASGVCHTDLHAAE-GDWP-VKPPLPFIPGHEGVGYVAAVGSGVTRVKE   84 (175)
T ss_dssp             CEE-EEEECCCCCTTCEEEEEEEEECCHHHHHHHH-TCSS-SCCCSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             CEE-EEeECCCCCCCEEEEEEEEecCcccchhhhc-cCcc-ccccCCcCCCCcceEEEEEeCCCcccccc
Confidence            666 6788888999999999999999988876542 1111 23456778899999999999976544443

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=84.96  E-value=0.36  Score=39.09  Aligned_cols=30  Identities=17%  Similarity=0.337  Sum_probs=26.9

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ++|+|+|+-|+.++..+..+|.+ |.++.+.
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~k-V~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQK-CALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCC-EEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCE-EEEEecc
Confidence            68899999999999999999998 8888764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.76  E-value=0.4  Score=41.22  Aligned_cols=30  Identities=27%  Similarity=0.522  Sum_probs=27.2

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      |||+|+|..|++++..|...|++ |+++++.
T Consensus        19 VlVIG~G~aGl~aA~~la~~G~~-V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGSGGAGFSAAISATDSGAK-VILIEKE   48 (308)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCC-EEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCc-EEEEecC
Confidence            79999999999999999999998 8888764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=84.54  E-value=0.69  Score=35.20  Aligned_cols=77  Identities=13%  Similarity=0.047  Sum_probs=46.4

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH--cC-----------CCeEEecCCCCChHHHHHHHHHHh
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKE--MG-----------ADATVLIDRNHSLEEISTHIIELL  385 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~--~g-----------a~~~i~~~~~~~~~~~~~~~~~~~  385 (408)
                      ++-|+|.|-+|+.+++-+...|.. +++.+++.++...++.  .+           +|.++.--.   .++..+.+.+..
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~---~~~~~~~~~~~~   77 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGVE-VVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVT---PGVALGAARRAG   77 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCE-EEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSC---GGGHHHHHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCCe-EEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEec---CchHHHHHHhhc
Confidence            467888999999999999999987 7777665544433322  22           444444322   234455555544


Q ss_pred             cCCCCceEEEcccch
Q psy1413         386 QGEQPDKTIDCSGIE  400 (408)
Q Consensus       386 ~~~~~d~i~d~~g~~  400 (408)
                      ...+ ..++|++...
T Consensus        78 ~~~~-~~~id~st~~   91 (152)
T d1i36a2          78 RHVR-GIYVDINNIS   91 (152)
T ss_dssp             TTCC-SEEEECSCCC
T ss_pred             ccCC-ceeeccCcCC
Confidence            3222 4667766543

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.41  E-value=0.63  Score=36.89  Aligned_cols=37  Identities=32%  Similarity=0.392  Sum_probs=31.8

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhh
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK  353 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~  353 (408)
                      .+.++.|+|.|.+|+.++++++.+|.+ |+..++...+
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~~-v~~~d~~~~~   79 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGAY-VVAYDPYVSP   79 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCE-EEEECTTSCH
T ss_pred             cceeeeeccccchhHHHHHHhhhccce-EEeecCCCCh
Confidence            467899999999999999999999997 8888876443

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.41  E-value=0.49  Score=38.29  Aligned_cols=30  Identities=30%  Similarity=0.451  Sum_probs=26.4

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      ++|+|+|+.|+.++..+.++|.+ |+++++.
T Consensus         6 viIIG~GpaG~~aA~~aar~G~k-V~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGAR-AAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCE-EEEEecc
Confidence            68889999999999999999998 7777653

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=84.39  E-value=0.32  Score=42.54  Aligned_cols=31  Identities=39%  Similarity=0.469  Sum_probs=26.1

Q ss_pred             EEEEecchhHHHHHHHHH-----HhCCCeEEEEecCh
Q psy1413         320 VLITGAGPIGLVTLLTAR-----ALGASRVVITDILE  351 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~-----~~Ga~~vv~~~~~~  351 (408)
                      |+|+|||+.|++++.++.     ..|.+ |+++++++
T Consensus        10 V~IvGaG~aGl~lA~~La~~~~~~~G~~-v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGAGPAGLMAARVLSEYVRQKPDLK-VRIIDKRS   45 (360)
T ss_dssp             EEEECCSHHHHHHHHHHHHHHHHSTTCC-EEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHhcccccCCCc-EEEEcCCC
Confidence            789999999999999885     46898 88888753

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.00  E-value=0.44  Score=41.08  Aligned_cols=32  Identities=41%  Similarity=0.569  Sum_probs=28.3

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      .|+|+|||..|++++..|+..|.. ++++++++
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~~-v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGRS-VHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCCC-EEEEEcCC
Confidence            489999999999999999999997 88887653

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=83.77  E-value=0.49  Score=36.43  Aligned_cols=34  Identities=21%  Similarity=0.200  Sum_probs=29.5

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhh
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHK  353 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~  353 (408)
                      +++|+|+|.+|..++..+...|.. |.+++|++++
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~~-V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGHE-VQGWLRVPQP   35 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCE-EEEECSSCCS
T ss_pred             EEEEECcCHHHHHHHHHHHHCCCc-eEEEEcCHHH
Confidence            588999999999999999999987 8888887654

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.65  E-value=0.5  Score=37.55  Aligned_cols=31  Identities=16%  Similarity=0.275  Sum_probs=26.7

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEec
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDI  349 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~  349 (408)
                      ..++|+|+|+.|++++..+..+|.+ ++++++
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~~-v~vie~   36 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAELK-PLLFEG   36 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCC-CEEECC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCc-EEEEEe
Confidence            5689999999999999999999998 566653

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.63  E-value=0.61  Score=43.68  Aligned_cols=33  Identities=21%  Similarity=0.127  Sum_probs=29.9

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .+|+|+|+|++|..++.-+.+.|..++.++|..
T Consensus        26 s~VlvvG~gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          26 AHVCLINATATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             CEEEECCCSHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CCEEEECCCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            679999999999999999999999999998754

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=83.59  E-value=2.4  Score=36.33  Aligned_cols=58  Identities=14%  Similarity=0.183  Sum_probs=45.0

Q ss_pred             hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC--hhhHHHHHHcCCCeEEe
Q psy1413         310 RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL--EHKLKTAKEMGADATVL  367 (408)
Q Consensus       310 ~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~--~~~~~~~~~~ga~~~i~  367 (408)
                      ....+.++++++...+|..|++++-.++.+|.+.+|++..+  ..|.+..+.+|+..+..
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~  113 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLT  113 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEec
Confidence            34445677776666669999999999999999988888654  56677888899877653

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.09  E-value=0.52  Score=40.81  Aligned_cols=30  Identities=23%  Similarity=0.387  Sum_probs=26.9

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      |+|+|+|..|++++..++..|.+ |++++++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~~-V~VlE~~   31 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGLN-VVVLEAR   31 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHhCCCC-EEEEecC
Confidence            68999999999999999999997 8888754

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.92  E-value=0.53  Score=40.76  Aligned_cols=32  Identities=38%  Similarity=0.649  Sum_probs=27.9

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      --|||+|+|..|++++..|...|++ |+++++.
T Consensus        20 ~DVvVIGaG~aGl~AA~~aa~~G~~-V~vlEK~   51 (317)
T d1qo8a2          20 TQVLVVGAGSAGFNASLAAKKAGAN-VILVDKA   51 (317)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHTCC-EEEECSS
T ss_pred             cCEEEECcCHHHHHHHHHHHHCCCc-EEEEeCC
Confidence            3489999999999999999999998 8888654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=82.91  E-value=0.81  Score=35.61  Aligned_cols=33  Identities=24%  Similarity=0.384  Sum_probs=27.4

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCC-eEEEEe
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGAS-RVVITD  348 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~-~vv~~~  348 (408)
                      .++.++|+|+|..|+.++..++.+|.+ +|+...
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~   35 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVG   35 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEec
Confidence            467899999999999999999999987 344443

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=82.58  E-value=0.58  Score=37.31  Aligned_cols=41  Identities=17%  Similarity=0.289  Sum_probs=35.0

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHc
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEM  360 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~  360 (408)
                      ++.|+|+|..|.+++..+...|-+ |.+.+|+++..+.+.+-
T Consensus         9 KI~ViGaG~wGtAlA~~La~~g~~-V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           9 KAVVFGSGAFGTALAMVLSKKCRE-VCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTEEE-EEEECSCHHHHHHHHHH
T ss_pred             eEEEECCCHHHHHHHHHHHHcCCe-EEEEEecHHHHHHHhhc
Confidence            589999999999999999888775 88889998888777543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.50  E-value=1.5  Score=35.41  Aligned_cols=84  Identities=19%  Similarity=0.253  Sum_probs=52.8

Q ss_pred             hhhccCcCCCCEEEEEecchhHHHHHHHHHHhCC-CeEEEEecChhhHHHHHH----cCCCeEEecCCCCChHHHHHHHH
Q psy1413         308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA-SRVVITDILEHKLKTAKE----MGADATVLIDRNHSLEEISTHII  382 (408)
Q Consensus       308 ~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga-~~vv~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~  382 (408)
                      .+....++++++||-+|+|. |...+.+++..|. .+|+.++.+++..+.+++    .+.+.+.....  +..+      
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~--d~~~------  137 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG--DGYY------  137 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--CGGG------
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC--chHH------
Confidence            34667899999999999855 6677788887774 358999988877665543    45433322211  0010      


Q ss_pred             HHhcCCCCceEEEcccch
Q psy1413         383 ELLQGEQPDKTIDCSGIE  400 (408)
Q Consensus       383 ~~~~~~~~d~i~d~~g~~  400 (408)
                      .....+.||.|+...+..
T Consensus       138 ~~~~~~~fD~I~~~~~~~  155 (213)
T d1dl5a1         138 GVPEFSPYDVIFVTVGVD  155 (213)
T ss_dssp             CCGGGCCEEEEEECSBBS
T ss_pred             ccccccchhhhhhhccHH
Confidence            012234689998765533

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.44  E-value=0.46  Score=36.82  Aligned_cols=65  Identities=15%  Similarity=0.201  Sum_probs=49.2

Q ss_pred             ecCCeEEEEccCccccccccccccccC------------------------------cceeEEEccCchH----HHHhhc
Q psy1413         100 ICGSDVHYLTHGQIGDFRLSDPMIVGH------------------------------EASGIVSKVGAKV----KHLKAT  145 (408)
Q Consensus       100 ~~g~~vlv~g~G~vG~~~i~~a~~~G~------------------------------~~~~vv~~~g~~~----~~~~~l  145 (408)
                      +.|+++.|+|-|.+|....+.++.+|+                              ..+.++.++|...    +.++.+
T Consensus        22 l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~~~~~a~~~adivvtaTGn~~vI~~eh~~~M  101 (163)
T d1li4a1          22 IAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIFVTTTGCIDIILGRHFEQM  101 (163)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCHHHHTTC
T ss_pred             ecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEeeehhhhhhhccEEEecCCCccchhHHHHHhc
Confidence            468999999999999888888777776                              3445666666542    678899


Q ss_pred             cCCcEEEEEccCCCCcccC
Q psy1413         146 RPGGCLVIVGAGSQDVKIP  164 (408)
Q Consensus       146 ~~gG~iv~~G~~~~~~~~~  164 (408)
                      |+|..++.+|.....+.++
T Consensus       102 KdgaIL~N~Ghfd~EId~~  120 (163)
T d1li4a1         102 KDDAIVCNIGHFDVEIDVK  120 (163)
T ss_dssp             CTTEEEEECSSSTTSBCHH
T ss_pred             cCCeEEEEeccccceecHH
Confidence            9998888888776655543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=82.35  E-value=0.92  Score=34.14  Aligned_cols=37  Identities=27%  Similarity=0.425  Sum_probs=30.9

Q ss_pred             EEEEEecchhHHHHHHHHHHhC-CCeEEEEecChhhHH
Q psy1413         319 KVLITGAGPIGLVTLLTARALG-ASRVVITDILEHKLK  355 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~G-a~~vv~~~~~~~~~~  355 (408)
                      ++.|+|+|.+|..++..+...| +..+++++.++++.+
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~   39 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQ   39 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccch
Confidence            4778899999999999988887 467999998877643

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.27  E-value=1.8  Score=33.82  Aligned_cols=31  Identities=29%  Similarity=0.238  Sum_probs=26.7

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      .+.|+|+|..|.+++..+...|-. |.+.+|.
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~~-V~l~~r~   32 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGNE-VRIWGTE   32 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCCE-EEEECCG
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCE-EEEEEec
Confidence            478999999999999999998876 7777764

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.25  E-value=2.9  Score=31.99  Aligned_cols=70  Identities=17%  Similarity=0.303  Sum_probs=46.5

Q ss_pred             CEEEEEecchhHHHHHHHHHHhCC-CeEEEEecChhhHH-HHHH-------cCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413         318 SKVLITGAGPIGLVTLLTARALGA-SRVVITDILEHKLK-TAKE-------MGADATVLIDRNHSLEEISTHIIELLQGE  388 (408)
Q Consensus       318 ~~~lv~G~G~~G~~~~~~~~~~Ga-~~vv~~~~~~~~~~-~~~~-------~ga~~~i~~~~~~~~~~~~~~~~~~~~~~  388 (408)
                      .++.|+|+|.+|..++..+...|. ..+++++.++++.+ .+.+       .+...++...+   .+          .-+
T Consensus        20 ~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~----------~~~   86 (159)
T d2ldxa1          20 CKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YN----------VSA   86 (159)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GG----------GGT
T ss_pred             CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hh----------hhc
Confidence            579999999999999998888775 56999998876642 2222       12333333322   11          125


Q ss_pred             CCceEEEcccch
Q psy1413         389 QPDKTIDCSGIE  400 (408)
Q Consensus       389 ~~d~i~d~~g~~  400 (408)
                      +.|+|+-+.|.+
T Consensus        87 ~adivvitag~~   98 (159)
T d2ldxa1          87 NSKLVIITAGAR   98 (159)
T ss_dssp             TEEEEEECCSCC
T ss_pred             cccEEEEecccc
Confidence            788999888864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=82.16  E-value=1.4  Score=33.47  Aligned_cols=39  Identities=15%  Similarity=0.126  Sum_probs=31.9

Q ss_pred             cCcCCCCEEEEE--ecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413         312 AGVTLGSKVLIT--GAGPIGLVTLLTARALGASRVVITDILE  351 (408)
Q Consensus       312 ~~~~~~~~~lv~--G~G~~G~~~~~~~~~~Ga~~vv~~~~~~  351 (408)
                      ....+++.++|+  |+|-+|+.+++++..+|.+ |.++.+.+
T Consensus        34 ~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~-Vtlv~~~~   74 (156)
T d1djqa2          34 GKKKIGKRVVILNADTYFMAPSLAEKLATAGHE-VTIVSGVH   74 (156)
T ss_dssp             TCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCE-EEEEESSC
T ss_pred             CccccCCceEEEecCCChHHHHHHHHHHHcCCe-EEEEecCC
Confidence            345677888887  6699999999999999997 77787654

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=82.07  E-value=2.1  Score=33.28  Aligned_cols=82  Identities=21%  Similarity=0.257  Sum_probs=46.6

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEE-ecCh-hhHHHHHHcCCCeEEecCCCCChHHHHH-------HHHHHhcCCC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVIT-DILE-HKLKTAKEMGADATVLIDRNHSLEEIST-------HIIELLQGEQ  389 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~-~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~~-------~~~~~~~~~~  389 (408)
                      ++.|.|-|-+|+.+.+.+...+--.++.+ +.++ .....+..++.+......+  .......       ...++.  .+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~v~g~~~~~~--~~   78 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPE--RVKLFEKAGIEVAGTVDDML--DE   78 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGG--GHHHHHHTTCCCCEEHHHHH--HT
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccc--cceeecccCcccCCChhHhh--cC
Confidence            57888889999999998876653335544 3332 3345566666554332211  0011110       111111  36


Q ss_pred             CceEEEcccchhhhh
Q psy1413         390 PDKTIDCSGIESTIK  404 (408)
Q Consensus       390 ~d~i~d~~g~~~~~~  404 (408)
                      +|+|+||+|.-.+.+
T Consensus        79 vDvViEcTG~f~~~~   93 (171)
T d1cf2o1          79 ADIVIDCTPEGIGAK   93 (171)
T ss_dssp             CSEEEECCSTTHHHH
T ss_pred             CCEEEEccCCCCCHH
Confidence            999999999765544

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=81.35  E-value=3.3  Score=32.14  Aligned_cols=71  Identities=15%  Similarity=0.137  Sum_probs=45.5

Q ss_pred             EEEEEecchhHHH-HHHHHHHhCCC-eEE-EEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413         319 KVLITGAGPIGLV-TLLTARALGAS-RVV-ITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI  394 (408)
Q Consensus       319 ~~lv~G~G~~G~~-~~~~~~~~Ga~-~vv-~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~  394 (408)
                      ++.|+|.|..|.. .+..++...-. .++ +.+++.++.+.+ ++++...++        .++++.+    ....+|.|+
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~--------~~~~ell----~~~~id~v~   72 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF--------DSYEELL----ESGLVDAVD   72 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE--------SCHHHHH----HSSCCSEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee--------eeeeccc----cccccceee
Confidence            4788999999975 46666654432 355 457777776654 667866554        2233333    245799999


Q ss_pred             Ecccchh
Q psy1413         395 DCSGIES  401 (408)
Q Consensus       395 d~~g~~~  401 (408)
                      -|+....
T Consensus        73 I~tp~~~   79 (181)
T d1zh8a1          73 LTLPVEL   79 (181)
T ss_dssp             ECCCGGG
T ss_pred             ccccccc
Confidence            8887654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=81.32  E-value=0.48  Score=36.09  Aligned_cols=40  Identities=13%  Similarity=0.020  Sum_probs=27.9

Q ss_pred             EEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC
Q psy1413         321 LITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMG  361 (408)
Q Consensus       321 lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g  361 (408)
                      -++|.|-+|..+++.++. +...+.+.+|+.++.+.+.+.+
T Consensus         3 gfIG~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHT
T ss_pred             EEEeCcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcc
Confidence            357889999999987765 3332446789999988776654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=81.14  E-value=1.3  Score=37.72  Aligned_cols=30  Identities=20%  Similarity=0.325  Sum_probs=25.2

Q ss_pred             CEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413         318 SKVLITGA-GPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      .++||+|+ |-+|..+++.+...|.. +++++
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~-vi~~~   33 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDV-ELVLR   33 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCE-EEEec
Confidence            36999999 99999999999988887 55444

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=81.12  E-value=0.54  Score=37.14  Aligned_cols=30  Identities=13%  Similarity=0.072  Sum_probs=25.7

Q ss_pred             eeeecCCeEEEEccCccccccccccccccC
Q psy1413          97 CVGICGSDVHYLTHGQIGDFRLSDPMIVGH  126 (408)
Q Consensus        97 ~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~  126 (408)
                      ..++++.+|+|+|+|-+|+.+++.|+.+|+
T Consensus        24 ~g~V~pa~VvViGaGvaG~~Aa~~A~~lGA   53 (183)
T d1l7da1          24 AGTVPPARVLVFGVGVAGLQAIATAKRLGA   53 (183)
T ss_dssp             TEEECCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred             cCCcCCcEEEEEcCcHHHHHHHHHHHHcCC
Confidence            345678899999999999999999988887

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=80.85  E-value=0.25  Score=37.67  Aligned_cols=134  Identities=31%  Similarity=0.316  Sum_probs=102.3

Q ss_pred             eccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCc
Q psy1413          70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGG  149 (408)
Q Consensus        70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG  149 (408)
                      -.|+.+.+ +..++|.+.+.++++.+.++++++.++.+.. |..  ....++...|.++.|+|..+|+..+.++.     
T Consensus        10 G~pe~l~~-~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~-G~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~v-----   80 (147)
T d1qora1          10 GGPEVLQA-VEFTPADPAENEIQVENKAIGINFIDTYIRS-GLY--PPPSLPSGLGTEAAGIVSKVGSGVKHIKA-----   80 (147)
T ss_dssp             CSGGGCEE-EECCCCCCCTTEEEEEEEEEECCHHHHHHHH-TSS--CCSSSSBCCCSCEEEEEEEECTTCCSCCT-----
T ss_pred             CCCceeEE-EEecCCCCCCCEEEEEEEEecccceeeeeec-CCC--CCCcceeeeccccccceeeeeeecccccc-----
Confidence            45777888 6788899999999999999999987765542 211  12356677899999999999987555555     


Q ss_pred             EEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEE
Q psy1413         150 CLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV  229 (408)
Q Consensus       150 ~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kv  229 (408)
                                                                                                      
T Consensus        81 --------------------------------------------------------------------------------   80 (147)
T d1qora1          81 --------------------------------------------------------------------------------   80 (147)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCccccc--ccc-hhhhhh
Q psy1413         230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGA--LLE-PLSVGV  306 (408)
Q Consensus       230 vi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa--~~~-~~~~~~  306 (408)
                         +|+|...                           ....|+|++|..++++.++++|++++++.++  .++ ...+++
T Consensus        81 ---GdrV~~~---------------------------~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~  130 (147)
T d1qora1          81 ---GDRVVYA---------------------------QSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRA  130 (147)
T ss_dssp             ---TCEEEES---------------------------CCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHH
T ss_pred             ---cceeeee---------------------------ccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHH
Confidence               8887421                           1246899999999999999999999876543  333 456777


Q ss_pred             hhhhccCcCCCCEEEE
Q psy1413         307 HACRRAGVTLGSKVLI  322 (408)
Q Consensus       307 ~~~~~~~~~~~~~~lv  322 (408)
                      +++.+..+++++++||
T Consensus       131 ~~l~~~~~~~G~~VLI  146 (147)
T d1qora1         131 HEILESRATQGSSLLI  146 (147)
T ss_dssp             HHHHHTTCCCBCCEEE
T ss_pred             HHHHHhCCCCCCEEEe
Confidence            7776677899999987

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.77  E-value=3.4  Score=35.51  Aligned_cols=58  Identities=19%  Similarity=0.247  Sum_probs=43.9

Q ss_pred             hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec--ChhhHHHHHHcCCCeEEe
Q psy1413         310 RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDI--LEHKLKTAKEMGADATVL  367 (408)
Q Consensus       310 ~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~--~~~~~~~~~~~ga~~~i~  367 (408)
                      ....++++..-+|... |..|++++..++.+|.+.++++..  +..|.+.++.+|+..++.
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~  117 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLT  117 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEe
Confidence            3444556656666655 999999999999999997777754  467778889999876543

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=80.77  E-value=0.59  Score=40.46  Aligned_cols=31  Identities=35%  Similarity=0.591  Sum_probs=27.6

Q ss_pred             EEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         319 KVLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       319 ~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      -|+|+|+|..|++++..|...|++ |+++++.
T Consensus        25 DVvVIG~G~aGl~aA~~la~~G~~-V~llEk~   55 (322)
T d1d4ca2          25 DVVIIGSGGAGLAAAVSARDAGAK-VILLEKE   55 (322)
T ss_dssp             SEEEECSSHHHHHHHHHHHTTTCC-EEEECSS
T ss_pred             eEEEECcCHHHHHHHHHHHHCCCc-EEEEeCC
Confidence            389999999999999999999998 8888764

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=80.76  E-value=6.7  Score=29.49  Aligned_cols=84  Identities=20%  Similarity=0.175  Sum_probs=51.8

Q ss_pred             EEEEEec-chhHHHHHHHHHHh--CCCeEEEEec--ChhhH-HHHHHcCCCeEEecCCCCChHHHHH-------------
Q psy1413         319 KVLITGA-GPIGLVTLLTARAL--GASRVVITDI--LEHKL-KTAKEMGADATVLIDRNHSLEEIST-------------  379 (408)
Q Consensus       319 ~~lv~G~-G~~G~~~~~~~~~~--Ga~~vv~~~~--~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~~-------------  379 (408)
                      ++.|.|+ |.+|.......+.+  .++ |+.++.  +-+++ +++++|....++..+.. ..+.+..             
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~-v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~-~~~~l~~~l~~~~~~~~~~~   80 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFR-VVALVAGKNVTRMVEQCLEFSPRYAVMDDEA-SAKLLKTMLQQQGSRTEVLS   80 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEE-EEEEEESSCHHHHHHHHHHHCCSEEEESSHH-HHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcE-EEEEEecCcHHHHHHHHHHHhhcccccccHH-HHHHHHHHhhhhcccccccc
Confidence            5789999 99999999999876  344 665543  33333 45677888777655430 0111111             


Q ss_pred             ---HHHHHhcCCCCceEEEcccchhhhh
Q psy1413         380 ---HIIELLQGEQPDKTIDCSGIESTIK  404 (408)
Q Consensus       380 ---~~~~~~~~~~~d~i~d~~g~~~~~~  404 (408)
                         .+.++.....+|.++.+..+...+.
T Consensus        81 g~~~l~~~~~~~~~D~vi~AI~G~aGL~  108 (151)
T d1q0qa2          81 GQQAACDMAALEDVDQVMAAIVGAAGLL  108 (151)
T ss_dssp             SHHHHHHHHTCTTCCEEEECCSSGGGHH
T ss_pred             ChHHHHHHhcCCCCCEEEEecCcccHHH
Confidence               2222333457899999887665544

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=80.73  E-value=0.99  Score=37.09  Aligned_cols=30  Identities=30%  Similarity=0.216  Sum_probs=25.3

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      |+|+|+|.-|+.++-++.++|++. +++..+
T Consensus         5 VIVIGgG~AG~eAA~~aAR~G~kt-llit~~   34 (230)
T d2cula1           5 VLIVGAGFSGAETAFWLAQKGVRV-GLLTQS   34 (230)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCE-EEEESC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcE-EEEEec
Confidence            688899999999999999999994 455444

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.69  E-value=0.58  Score=38.30  Aligned_cols=29  Identities=28%  Similarity=0.475  Sum_probs=26.2

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEec
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDI  349 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~  349 (408)
                      ++|+|+|+-|++++..+..+|.+ |++++.
T Consensus         6 viVIG~GpaGl~aA~~aa~~G~k-V~viE~   34 (235)
T d1h6va1           6 LIIIGGGSGGLAAAKEAAKFDKK-VMVLDF   34 (235)
T ss_dssp             EEEECCSHHHHHHHHHHGGGCCC-EEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHCCCe-EEEEec
Confidence            78899999999999999999999 777873

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.66  E-value=0.86  Score=38.85  Aligned_cols=32  Identities=22%  Similarity=0.339  Sum_probs=28.3

Q ss_pred             CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEe
Q psy1413         316 LGSKVLITGAGPIGLVTLLTARALGASRVVITD  348 (408)
Q Consensus       316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~  348 (408)
                      .+.+++|.|-|.+|..+++++...|++ |+.++
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Gak-vv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGAK-CVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEE
Confidence            467999999999999999999999998 66654

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=80.23  E-value=0.61  Score=40.44  Aligned_cols=30  Identities=23%  Similarity=0.500  Sum_probs=26.9

Q ss_pred             EEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413         320 VLITGAGPIGLVTLLTARALGASRVVITDIL  350 (408)
Q Consensus       320 ~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~  350 (408)
                      |||+|+|.-|++++-.|...|++ |+++++.
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~~-V~liEK~   37 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGLS-TIVLSLI   37 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCC-EEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCC-EEEEecC
Confidence            89999999999999999999998 8888654