Psyllid ID: psy14174

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MTSNEKEEFDISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNEQSHPVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccEEEEccccccEEEEEEEcccHHHcccccccccEEEEEccEEcccccHHHHHHHHHHccccEEEEEEEccccccccccEEEEcccccccccccccccccccccccccccEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccccHHccHHHHHHHHHHHHHccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEcccccccEEEEcccHHHEEEEEEccccHHHHHcccccccEEEEEccEEHHHccHHHHHHHHHHccEEEEEEEEcccccccccccEEEEEEEEEccccccccccHHHcccccccccEEEEEEcccccc
Coil and Loop (DISEMBL)
mtsnekeeFDISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIvneqshpvlsnaMQISLEVLDVLLSRLALNDDCKELFVLLqrpnlqgllcahdavaqkdyyprlpeipqelvddeEETVKIVQLVKsneplgatiktdeeSGKIVVARVMHggaadrsglihvgdevcevnginvegktpGDVLKILQSsegtitfklipadnklgyreskIRVRahfdydassdpyipckdaglsfnkgdilhvvsqddayw
Flexible Loop (DISEMBL)
MTSNEKEEFDISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNEQSHPVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQlvksneplgatiktdeesgKIVVARVMHGGAADRSGLIHVGDEVCEVNginvegktpgDVLKILQSSegtitfklipadnklgyreSKIRVRAHFdydassdpyiPCKDAGLSFNKGDILHVVSQDDAYW
Low Complexity Region (SEG)
MTSNEKEEFDISVsslletlqesqstFSANDeellflssllqskelNALVHVHNSIVNEQSHPVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW
Disordered region (IsUnstruct)
*********************************LLFLSSLLQSKELNALVHVHNSI****************LEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSN*PLGATIK****SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVV*******
Disordered Region (DISOPRED)
***************LLET***************LFLSSLLQSKELNALVHVHNSIV**********AMQISLEVLDVLL**********ELFVLLQRPNLQGLLCAHDAVAQKDYY***************ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIP*****************************CKDAGLSFNKGDILHVVSQD**YW
Disordered Region (DISEMBL)
***********SVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNEQSHPVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW
Disordered Region (DISPRO)
*****KEEFDISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNEQSHPVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTSNEKEEFDISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNEQSHPVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	269	2.2.26 [Sep-21-2011]
Q8BVD5	576	MAGUK p55 subfamily membe	yes	N/A	0.959	0.447	0.481	3e-63
Q5T2T1	576	MAGUK p55 subfamily membe	yes	N/A	0.962	0.449	0.479	9e-62
Q5U2Y3	576	MAGUK p55 subfamily membe	yes	N/A	0.962	0.449	0.482	2e-61
A6QQZ7	576	MAGUK p55 subfamily membe	yes	N/A	0.962	0.449	0.482	2e-61
Q6P0D7	576	MAGUK p55 subfamily membe	yes	N/A	0.862	0.402	0.483	6e-59
A8KBF6	576	MAGUK p55 subfamily membe	yes	N/A	0.959	0.447	0.484	4e-58
O88954	585	MAGUK p55 subfamily membe	no	N/A	0.895	0.411	0.473	2e-56
O88910	568	MAGUK p55 subfamily membe	no	N/A	0.895	0.424	0.469	3e-56
Q13368	585	MAGUK p55 subfamily membe	no	N/A	0.888	0.408	0.461	2e-54
Q96JB8	637	MAGUK p55 subfamily membe	no	N/A	0.947	0.400	0.417	5e-50

>sp|Q8BVD5|MPP7_MOUSE MAGUK p55 subfamily member 7 OS=Mus musculus GN=Mpp7 PE=2 SV=2

 Score =  241 bits (616), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 127/264 (48%), Positives = 176/264 (66%), Gaps = 6/264 (2%)

Query: 10  DISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSI---VNEQSHPVLS 66
           D+ +  LL  L         + E+L FL  +   K L++LV +H  +     +   P+L 
Sbjct: 11  DMGLYELLAALPAQLQPHVDSQEDLTFLWDVFGEKSLHSLVKIHEKLHCYEKQNPLPILH 70

Query: 67  NAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQE 126
            A  ++ ++ + L ++L  N + +EL  LL +PN++ LL  HD VAQK Y P LP +P +
Sbjct: 71  GAAALADDLTEELQNKLP-NSEIRELLKLLSKPNVKALLSVHDTVAQKSYDPVLPPVPDD 129

Query: 127 LVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEV 186
            +DDEE++VKI++LVK++EPLGATIK DE++G I VAR+M GGAADRSGLIHVGDE+ EV
Sbjct: 130 -IDDEEDSVKIIRLVKNSEPLGATIKKDEQTGAITVARIMRGGAADRSGLIHVGDELREV 188

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKLIPADN-KLGYRESKIRVRAHFDYDASSDPYIP 245
           NGI VE K P +++KIL  S+G ITFK+IP+   +   +E KI ++A FDYD   D  IP
Sbjct: 189 NGIPVEDKRPEEIIKILSQSKGAITFKIIPSTKEETPSKEGKIFIKALFDYDPKEDKAIP 248

Query: 246 CKDAGLSFNKGDILHVVSQDDAYW 269
           CK+AGLSF KGDIL ++SQDD  W
Sbjct: 249 CKEAGLSFRKGDILQIMSQDDVTW 272

Acts as an important adapter that promotes epithelial cell polarity and tight junction formation via its interaction with DLG1. Involved in the assembly of protein complexes at sites of cell-cell contact.
Mus musculus (taxid: 10090)

>sp|Q5T2T1|MPP7_HUMAN MAGUK p55 subfamily member 7 OS=Homo sapiens GN=MPP7 PE=1 SV=1

 Score =  236 bits (603), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 126/263 (47%), Positives = 174/263 (66%), Gaps = 4/263 (1%)

Query: 10  DISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSI-VNEQSHPV-LSN 67
           D  +  LL  L         + E+L FL  +   K L++LV +H  +   E+  PV + +
Sbjct: 11  DTGLYELLAALPAQLQPHVDSQEDLTFLWDMFGEKSLHSLVKIHEKLHYYEKQSPVPILH 70

Query: 68  AMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQEL 127
                 + L   L    LN + +EL  LL +PN++ LL  HD VAQK+Y P LP +P++ 
Sbjct: 71  GAAALADDLAEELQNKPLNSEIRELLKLLSKPNVKALLSVHDTVAQKNYDPVLPPMPED- 129

Query: 128 VDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN 187
           +DDEE++VKI++LVK+ EPLGATIK DE++G I+VAR+M GGAADRSGLIHVGDE+ EVN
Sbjct: 130 IDDEEDSVKIIRLVKNREPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVN 189

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKLIPADN-KLGYRESKIRVRAHFDYDASSDPYIPC 246
           GI VE K P ++++IL  S+G ITFK+IP    +   +E K+ ++A FDY+ + D  IPC
Sbjct: 190 GIPVEDKRPEEIIQILAQSQGAITFKIIPGSKEETPSKEGKMFIKALFDYNPNEDKAIPC 249

Query: 247 KDAGLSFNKGDILHVVSQDDAYW 269
           K+AGLSF KGDIL ++SQDDA W
Sbjct: 250 KEAGLSFKKGDILQIMSQDDATW 272

Acts as an important adapter that promotes epithelial cell polarity and tight junction formation via its interaction with DLG1. Involved in the assembly of protein complexes at sites of cell-cell contact.

Homo sapiens (taxid: 9606)

>sp|Q5U2Y3|MPP7_RAT MAGUK p55 subfamily member 7 OS=Rattus norvegicus GN=Mpp7 PE=2 SV=2

 Score =  236 bits (601), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 127/263 (48%), Positives = 171/263 (65%), Gaps = 4/263 (1%)

Query: 10  DISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSI-VNEQSHPV-LSN 67
           D  +  LL  L         + E+L FL  +   K L++LV +H  +   E+  PV + +
Sbjct: 11  DTGLYELLAALPAQLQPHVDSQEDLTFLWDMFGEKSLHSLVKIHEKLHYYEKQSPVPILH 70

Query: 68  AMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQEL 127
                 + L   L     N + +EL  LL +PN++ LL  HD VAQK Y P LP +P + 
Sbjct: 71  GAAALADDLADELQNKPPNSEIRELLKLLSKPNVKALLSVHDTVAQKSYDPVLPPMPDD- 129

Query: 128 VDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN 187
           +DDEE++VKI++LVK+ EPLGATIK DE++G I VAR+M GGAADRSGLIHVGDE+ EVN
Sbjct: 130 IDDEEDSVKIIRLVKNREPLGATIKKDEQTGAITVARIMRGGAADRSGLIHVGDELREVN 189

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKLIPADN-KLGYRESKIRVRAHFDYDASSDPYIPC 246
           GI VE K P ++++IL  S+G ITFK+IP+   ++  +E KI ++A FDYD   D  IPC
Sbjct: 190 GIPVEDKRPEEIIQILSQSQGAITFKIIPSTKEEIPSKEGKIFIKALFDYDPKEDKAIPC 249

Query: 247 KDAGLSFNKGDILHVVSQDDAYW 269
           K+AGLSF KGDIL ++SQDDA W
Sbjct: 250 KEAGLSFRKGDILQIMSQDDATW 272

Acts as an important adapter that promotes epithelial cell polarity and tight junction formation via its interaction with DLG1. Involved in the assembly of protein complexes at sites of cell-cell contact.

Rattus norvegicus (taxid: 10116)

>sp|A6QQZ7|MPP7_BOVIN MAGUK p55 subfamily member 7 OS=Bos taurus GN=MPP7 PE=2 SV=1

 Score =  235 bits (600), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 127/263 (48%), Positives = 174/263 (66%), Gaps = 4/263 (1%)

Query: 10  DISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSI-VNEQSHPV-LSN 67
           D  +  LL  L         + E+L FL  +   K L++LV +H  +   E+ +PV +  
Sbjct: 11  DTGLYELLVALPAQLQPHVDSQEDLTFLWDVFGEKSLHSLVKIHEKLHYYEKQNPVPILQ 70

Query: 68  AMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQEL 127
                 + L   L    LN + +EL  LL +PN++ LL  HD VAQK+Y P LP +P + 
Sbjct: 71  GAAALADDLAEELQNKPLNSEIRELLKLLSKPNVKALLSVHDTVAQKNYDPVLPPMPDD- 129

Query: 128 VDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN 187
           +D+EE++VKI++LVK+ EPLGATIK DE++G IVVAR+M GGAADRSGLIHVGDE+ EVN
Sbjct: 130 IDNEEDSVKIIRLVKNREPLGATIKKDEQTGAIVVARIMRGGAADRSGLIHVGDELREVN 189

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKLIPA-DNKLGYRESKIRVRAHFDYDASSDPYIPC 246
           GI VE K P ++++IL  S+G ITFK+IP+   +   +E K+ ++A FDYD + D  IPC
Sbjct: 190 GIPVEDKRPEEIIQILAQSQGAITFKIIPSIKEETPSKEGKMFIKALFDYDPNEDKAIPC 249

Query: 247 KDAGLSFNKGDILHVVSQDDAYW 269
           K+AGLSF KGDIL ++SQDDA W
Sbjct: 250 KEAGLSFKKGDILQIMSQDDATW 272

Acts as an important adapter that promotes epithelial cell polarity and tight junction formation via its interaction with DLG1. Involved in the assembly of protein complexes at sites of cell-cell contact.

Bos taurus (taxid: 9913)

>sp|Q6P0D7|MPP7_DANRE MAGUK p55 subfamily member 7 OS=Danio rerio GN=mpp7 PE=1 SV=1

 Score =  227 bits (579), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 115/238 (48%), Positives = 168/238 (70%), Gaps = 6/238 (2%)

Query: 36  FLSSLLQSKELNALVHVHNSIVNEQ---SHPVLSNAMQISLEVLDVLLSRLALNDDCKEL 92
           FL ++   + L++LV +H  +   +     PVL +A  ++ ++ + L +R A N+  +EL
Sbjct: 37  FLHAMFGERSLHSLVKIHEKLQCYEDCAPTPVLDSAGSLAADLTEELQARSASNE-IREL 95

Query: 93  FVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIK 152
             LL +P+++ LL  HD VA+K Y P LP +P + +DDEE++VKI++LVK+ EPLGATIK
Sbjct: 96  VKLLSKPHVKSLLSVHDTVAKKSYDPELPPLPDD-IDDEEDSVKIIRLVKNKEPLGATIK 154

Query: 153 TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF 212
            DE +G I+VAR++ GGAADRSGLIHVGDE+ EVNGI V+ K P ++++IL  S+G ITF
Sbjct: 155 KDEHTGAILVARILRGGAADRSGLIHVGDELKEVNGIPVDDKKPEEIIRILSQSQGAITF 214

Query: 213 KLIPA-DNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           K++P   ++   +E K+ ++A FDY+ + D  IPCK+AGL F KGDIL V+SQDDA W
Sbjct: 215 KVVPGIKDEAQSKEPKMFIKALFDYNPAEDKAIPCKEAGLGFKKGDILQVMSQDDATW 272

Acts as an important adapter that promotes epithelial cell polarity and tight junction formation. Involved in the assembly of protein complexes at sites of cell-cell contact.

Danio rerio (taxid: 7955)

>sp|A8KBF6|MPP7_XENTR MAGUK p55 subfamily member 7 OS=Xenopus tropicalis GN=mpp7 PE=2 SV=1

 Score =  224 bits (572), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 128/264 (48%), Positives = 177/264 (67%), Gaps = 6/264 (2%)

Query: 10  DISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSI---VNEQSHPVLS 66
           D  +  +L TL         + E+L FL  +   K L++LV +H  +     E   PV+ 
Sbjct: 11  DTGLYEILATLPAQLQPHVDSQEDLTFLWDMFGEKSLHSLVKIHEKLHYYEKENPMPVIH 70

Query: 67  NAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQE 126
           +A  ++ E+ + L S+ +LN + +EL  LL +PNL+ LL  HD VAQK Y P LP +P +
Sbjct: 71  SATALAEELAEELQSK-SLNSEIRELLKLLSKPNLKALLSVHDTVAQKSYDPVLPPMPDD 129

Query: 127 LVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEV 186
           + D +E++VKI++LVK+ EPLGATIK DE++G IVVAR+M GGAADRSGLIHVGDE+ EV
Sbjct: 130 IDD-DEDSVKIIRLVKNREPLGATIKKDEKTGAIVVARIMRGGAADRSGLIHVGDELREV 188

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKLIPA-DNKLGYRESKIRVRAHFDYDASSDPYIP 245
           NGI+VE K P +++ IL  S+G ITFK+IP+   +    + K+ V+A FDY  + D  IP
Sbjct: 189 NGISVEDKKPEEIIHILAQSQGAITFKIIPSIKEEPPNNDGKMFVKALFDYYPNEDKAIP 248

Query: 246 CKDAGLSFNKGDILHVVSQDDAYW 269
           CK+AGLSF KGDIL ++SQDDA W
Sbjct: 249 CKEAGLSFRKGDILQIMSQDDATW 272

Acts as an important adapter that promotes epithelial cell polarity and tight junction formation. Involved in the assembly of protein complexes at sites of cell-cell contact.

Xenopus tropicalis (taxid: 8364)

>sp|O88954|MPP3_RAT MAGUK p55 subfamily member 3 OS=Rattus norvegicus GN=Mpp3 PE=1 SV=3

 Score =  219 bits (558), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/247 (47%), Positives = 166/247 (67%), Gaps = 6/247 (2%)

Query: 28  SANDEELLFLSSLLQSKELNALVHVHNSIV---NEQSHPVLSNAMQISLEVLDVLLSRLA 84
           S + EE+ FL  +   K L  L+ +H  +     +   PVL +AM ++ +V++ L +  +
Sbjct: 25  SNHREEMGFLRDVFSEKSLGYLMKIHEKLRYYERQSPTPVLHSAMALAEDVMEELQA-AS 83

Query: 85  LNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDD-EEETVKIVQLVKS 143
           ++ D +EL  LL  P+L+ +L  HD VAQK++ P LP +P  + +D EEE+VKIV+LVK+
Sbjct: 84  VHSDERELLQLLSTPHLRAVLMVHDTVAQKNFDPVLPPLPDNIDEDFEEESVKIVRLVKN 143

Query: 144 NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL 203
            EPLGATI+ DE SG +VVAR+M GGAADRSGL+HVGDE+ EVNGI V  K P ++ +IL
Sbjct: 144 KEPLGATIRRDEHSGAVVVARIMRGGAADRSGLVHVGDELREVNGITVLHKRPDEISQIL 203

Query: 204 QSSEGTITFKLIPADNKL-GYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVV 262
             S+G+IT K+IPA  +   ++ESK+ +RA F YD   D  IPC++AGL F +  +L VV
Sbjct: 204 AQSQGSITLKIIPATQEEDRFKESKVFMRALFHYDPREDRAIPCQEAGLPFQQRQVLEVV 263

Query: 263 SQDDAYW 269
           SQDD  W
Sbjct: 264 SQDDPTW 270

Rattus norvegicus (taxid: 10116)

>sp|O88910|MPP3_MOUSE MAGUK p55 subfamily member 3 OS=Mus musculus GN=Mpp3 PE=1 SV=2

 Score =  218 bits (555), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 116/247 (46%), Positives = 167/247 (67%), Gaps = 6/247 (2%)

Query: 28  SANDEELLFLSSLLQSKELNALVHVHNSIV---NEQSHPVLSNAMQISLEVLDVLLSRLA 84
           S + EE+ FL  +   K L+ L+ +H  +     +   PVL +AM ++ +V++ L +  +
Sbjct: 25  SNHREEMGFLRDVFSEKSLSYLMKIHEKLRYYERQSPTPVLHSAMALAEDVMEELQA-AS 83

Query: 85  LNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDD-EEETVKIVQLVKS 143
           ++ D +EL  LL  P+L+ +L  HD VAQK++ P LP +P  + +D EEE+VKIV+LVK+
Sbjct: 84  VHSDERELLQLLSTPHLRAVLMVHDTVAQKNFDPVLPPLPDNIDEDFEEESVKIVRLVKN 143

Query: 144 NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL 203
            EPLGATI+ DE SG +VVAR+M GGAADRSGL+HVGDE+ EVNGI V  K P ++ +IL
Sbjct: 144 KEPLGATIRRDEHSGAVVVARIMRGGAADRSGLVHVGDELREVNGIAVLHKRPDEISQIL 203

Query: 204 QSSEGTITFKLIPADNKLG-YRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVV 262
             S+G+IT K+IPA  +   +++SK+ +RA F YD   D  IPC++AGL F +  +L VV
Sbjct: 204 AQSQGSITLKIIPATQEEDRFKDSKVFMRALFHYDPREDRAIPCQEAGLPFQRRQVLEVV 263

Query: 263 SQDDAYW 269
           SQDD  W
Sbjct: 264 SQDDPTW 270

Mus musculus (taxid: 10090)

>sp|Q13368|MPP3_HUMAN MAGUK p55 subfamily member 3 OS=Homo sapiens GN=MPP3 PE=1 SV=2

 Score =  212 bits (540), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 115/249 (46%), Positives = 169/249 (67%), Gaps = 10/249 (4%)

Query: 28  SANDEELLFLSSLLQSKELNALVHVHNSIV---NEQSHPVLSNAMQISLEVLDVLLSRLA 84
           S + EE+ FL  +   K L+ L+ +H  +     +   PVL +A+ ++ +V++ L +  +
Sbjct: 25  SNHKEEMGFLRDVFSEKSLSYLMKIHEKLRYYERQSPTPVLHSAVALAEDVMEELQA-AS 83

Query: 85  LNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDD-EEETVKIVQLVKS 143
           ++ D +EL  LL  P+L+ +L  HD VAQK++ P LP +P  + +D +EE+VKIV+LVK+
Sbjct: 84  VHSDERELLQLLSTPHLRAVLMVHDTVAQKNFDPVLPPLPDNIDEDFDEESVKIVRLVKN 143

Query: 144 NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL 203
            EPLGATI+ DE SG +VVAR+M GGAADRSGL+HVGDE+ EVNGI V  K P ++ +IL
Sbjct: 144 KEPLGATIRRDEHSGAVVVARIMRGGAADRSGLVHVGDELREVNGIAVLHKRPDEISQIL 203

Query: 204 QSSEGTITFKLIPA---DNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILH 260
             S+G+IT K+IPA   +++L  +ESK+ +RA F Y+   D  IPC++AGL F +  +L 
Sbjct: 204 AQSQGSITLKIIPATQEEDRL--KESKVFMRALFHYNPREDRAIPCQEAGLPFQRRQVLE 261

Query: 261 VVSQDDAYW 269
           VVSQDD  W
Sbjct: 262 VVSQDDPTW 270

Homo sapiens (taxid: 9606)

>sp|Q96JB8|MPP4_HUMAN MAGUK p55 subfamily member 4 OS=Homo sapiens GN=MPP4 PE=1 SV=2

 Score =  197 bits (502), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 109/261 (41%), Positives = 159/261 (60%), Gaps = 6/261 (2%)

Query: 13  VSSLLETLQESQSTFSAND-EELLFLSSLLQSKELNALVHVHNSIVNEQSH---PVLSNA 68
           +S +L  + +  S F   D   +  L  LL S  L AL+ +++ +   +     P   +A
Sbjct: 28  LSQILRLVLQELSLFYGRDVNGVCLLYDLLHSPWLQALLKIYDCLQEFKEKKLVPATPHA 87

Query: 69  MQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELV 128
             +S EV++ LL     + + +EL  +LQ P+ + LL AHD +AQKD+ P LP +P   +
Sbjct: 88  QVLSYEVVE-LLRETPTSPEIQELRQMLQAPHFKALLSAHDTIAQKDFEPLLPPLPDN-I 145

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
            + EE ++IV LVK+ +PLGATIK  E +G I+VAR++HGG A+RSGL++ GD++ EVNG
Sbjct: 146 PESEEAMRIVCLVKNQQPLGATIKRHEMTGDILVARIIHGGLAERSGLLYAGDKLVEVNG 205

Query: 189 INVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKD 248
           ++VEG  P  V+ IL  S GTI FK++P  +     +  + VRA  +Y    DP IPC D
Sbjct: 206 VSVEGLDPEQVIHILAMSRGTIMFKVVPVSDPPVNSQQMVYVRAMTEYWPQEDPDIPCMD 265

Query: 249 AGLSFNKGDILHVVSQDDAYW 269
           AGL F KGDIL +V Q+DA W
Sbjct: 266 AGLPFQKGDILQIVDQNDALW 286

May play a role in retinal photoreceptors development.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
242023194	580	conserved hypothetical protein [Pediculu	0.970	0.45	0.714	1e-109
328789266	1184	PREDICTED: hypothetical protein LOC40859	0.996	0.226	0.681	1e-104
307171943	1225	MAGUK p55 subfamily member 7 [Camponotus	0.966	0.212	0.690	1e-103
307200060	552	MAGUK p55 subfamily member 7 [Harpegnath	0.966	0.471	0.690	1e-102
332026659	602	MAGUK p55 subfamily member 7 [Acromyrmex	0.981	0.438	0.681	1e-101
328708439	619	PREDICTED: MAGUK p55 subfamily member 7-	0.966	0.420	0.660	1e-100
189235447	550	PREDICTED: similar to membrane-associate	0.892	0.436	0.686	2e-98
322795210	548	hypothetical protein SINV_10126 [Solenop	0.955	0.468	0.676	2e-98
221330166	585	menage a trois, isoform C [Drosophila me	0.959	0.441	0.671	7e-98
195119688	556	GI19661 [Drosophila mojavensis] gi|19390	0.959	0.464	0.643	9e-96

>gi|242023194|ref|XP_002432021.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212517372|gb|EEB19283.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/266 (71%), Positives = 230/266 (86%), Gaps = 5/266 (1%)

Query: 8   EFDISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVN----EQSHP 63
           ++D ++S LL +L+E+++  S  +EE  FLS LLQSKEL+ALV VHN I+N    E+ HP
Sbjct: 11  DWDPALSKLLSSLEEAKTDLSTTEEEFTFLSELLQSKELHALVKVHNKILNNGKDEKFHP 70

Query: 64  VLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEI 123
            LSNAMQI+LEVLDV+  +  L +D KE+F++LQ+P++QGLLCAHDAVAQKDY+PRLPEI
Sbjct: 71  TLSNAMQIALEVLDVMAPKTVLIEDAKEVFLILQKPHIQGLLCAHDAVAQKDYFPRLPEI 130

Query: 124 PQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEV 183
           P E VD++EET+KIVQLVKSNEPLGATIK DEE+GKI+VAR+MHGGAADRSGLIHVGDEV
Sbjct: 131 PLE-VDEDEETIKIVQLVKSNEPLGATIKADEETGKIIVARIMHGGAADRSGLIHVGDEV 189

Query: 184 CEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPY 243
            EVNGINVEGKTP DVLKILQ+SEGTIT KL+PAD+K   RESK+RVR+HFDY++S DPY
Sbjct: 190 VEVNGINVEGKTPNDVLKILQNSEGTITLKLVPADSKHNIRESKVRVRSHFDYNSSVDPY 249

Query: 244 IPCKDAGLSFNKGDILHVVSQDDAYW 269
           IPCK+AGL F KGD+LH+VSQDDAYW
Sbjct: 250 IPCKEAGLDFKKGDVLHIVSQDDAYW 275

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789266|ref|XP_392140.3| PREDICTED: hypothetical protein LOC408598 [Apis mellifera]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/283 (68%), Positives = 231/283 (81%), Gaps = 15/283 (5%)

Query: 1   MTSNEKEEFDISVSSLLETLQESQSTF-SANDEELLFLSSLLQSKELNALVHVHNSIVN- 58
           M S  K  +  ++S LL +LQE+++   S  +EE  FLS LLQSKELNALV+VHN I+N 
Sbjct: 1   MASQIKMFWHFALSKLLNSLQENKNEIPSCTEEEFGFLSELLQSKELNALVNVHNKILNN 60

Query: 59  ---EQSHPVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKD 115
              ++  PVLSN+M I +EVLD+L ++  ++ DCKELF LLQ+P++QGLLCAHDAVAQKD
Sbjct: 61  VKDDKFFPVLSNSMDIDIEVLDLLSTKTHVSKDCKELFHLLQKPHIQGLLCAHDAVAQKD 120

Query: 116 YYPRLPEIPQELVDDEEETVKIVQLVKSNEPL---------GATIKTDEESGKIVVARVM 166
           YYPRLPEIP E VD++EETVKIVQLVKSNEPL         GATIKT E +GKIV+AR+M
Sbjct: 121 YYPRLPEIPLE-VDEDEETVKIVQLVKSNEPLCGAGVEPIVGATIKTCEVTGKIVIARIM 179

Query: 167 HGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRES 226
           HGGAADRSGLIHVGDEVCEVNGI+VEGKTP  VLKILQ+SEGTITFK++PAD+K G RES
Sbjct: 180 HGGAADRSGLIHVGDEVCEVNGISVEGKTPNCVLKILQNSEGTITFKIVPADSKGGIRES 239

Query: 227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           K+RVRAHF Y A+ DPYIPCK+AGL F+KGD+LH+VSQDDAYW
Sbjct: 240 KVRVRAHFSYKAAEDPYIPCKEAGLDFSKGDVLHIVSQDDAYW 282

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307171943|gb|EFN63569.1| MAGUK p55 subfamily member 7 [Camponotus floridanus]

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/275 (69%), Positives = 227/275 (82%), Gaps = 15/275 (5%)

Query: 9   FDISVSSLLETLQESQSTF-SANDEELLFLSSLLQSKELNALVHVHNSIVN----EQSHP 63
           +D ++S LL +LQE++S   S  +EE  FLS LLQSKELNALV+VHN I+N    ++  P
Sbjct: 6   WDPALSKLLNSLQENKSEIPSCTEEEFGFLSELLQSKELNALVNVHNKILNNVKDDKFFP 65

Query: 64  VLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEI 123
           VLSN+M I +EVLD+L ++  ++ DCKELF LLQ+P++QGLLCAHDAVAQKDYYPRLP+I
Sbjct: 66  VLSNSMDIDVEVLDLLSTKTHISSDCKELFHLLQKPHIQGLLCAHDAVAQKDYYPRLPDI 125

Query: 124 PQELVDDEEETVKIVQLVKSNEPLG---------ATIKTDEESGKIVVARVMHGGAADRS 174
           P E VD++EETVKIVQLVKSNEPLG         ATIKT E +GKIV+AR+MHGGAADRS
Sbjct: 126 PLE-VDEDEETVKIVQLVKSNEPLGDAGVEPIVGATIKTCEVTGKIVIARIMHGGAADRS 184

Query: 175 GLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHF 234
           GLIHVGDEVCEVNGI+VEGKTP  VL ILQ+SEGTITFK++PAD+K G RESK+RVRAHF
Sbjct: 185 GLIHVGDEVCEVNGISVEGKTPSFVLHILQNSEGTITFKIVPADSKSGVRESKVRVRAHF 244

Query: 235 DYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            Y A+ DPYIPCK+AGL F KGD+LH+VSQDDAYW
Sbjct: 245 SYVAAEDPYIPCKEAGLDFVKGDVLHIVSQDDAYW 279

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200060|gb|EFN80406.1| MAGUK p55 subfamily member 7 [Harpegnathos saltator]

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/275 (69%), Positives = 227/275 (82%), Gaps = 15/275 (5%)

Query: 9   FDISVSSLLETLQESQSTF-SANDEELLFLSSLLQSKELNALVHVHNSIVN----EQSHP 63
           +D ++S LL +LQES+S   S  +EE  FLS LLQSKELNALV+VHN I+N    ++  P
Sbjct: 6   WDPALSKLLNSLQESKSEIPSCTEEEFGFLSELLQSKELNALVNVHNKILNNVKDDKFFP 65

Query: 64  VLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEI 123
           VLSN+M I +EVLD+L ++  ++ +CKELF LLQ+P++QGLLCAHDAVAQKDYYPRLP+I
Sbjct: 66  VLSNSMDIDIEVLDLLSTKTHVSAECKELFYLLQKPHIQGLLCAHDAVAQKDYYPRLPDI 125

Query: 124 PQELVDDEEETVKIVQLVKSNEPLG---------ATIKTDEESGKIVVARVMHGGAADRS 174
           P E VD++EETVKIVQLVKSNEPLG         ATIKT E +GKIV+AR+MHGGAADRS
Sbjct: 126 PLE-VDEDEETVKIVQLVKSNEPLGDAGVEPIVGATIKTCEVTGKIVIARIMHGGAADRS 184

Query: 175 GLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHF 234
           GLIHVGDEVCEVNGI+VEG+TP  VL ILQ+SEGTITFK++PAD+K G RESK+RVRAHF
Sbjct: 185 GLIHVGDEVCEVNGISVEGRTPSFVLHILQNSEGTITFKIVPADSKSGVRESKVRVRAHF 244

Query: 235 DYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            Y AS DPYIPCK+AGL F KGD+LH+VSQDDAYW
Sbjct: 245 SYVASEDPYIPCKEAGLDFVKGDVLHIVSQDDAYW 279

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332026659|gb|EGI66768.1| MAGUK p55 subfamily member 7 [Acromyrmex echinatior]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/279 (68%), Positives = 228/279 (81%), Gaps = 15/279 (5%)

Query: 5   EKEEFDISVSSLLETLQESQSTF-SANDEELLFLSSLLQSKELNALVHVHNSIVN----E 59
           E   +D ++S LL +LQE++S   S  +EE  FLS LLQSKELNALV+VHN I+N    +
Sbjct: 8   ENVNWDPALSKLLNSLQENKSEIPSCTEEEFGFLSELLQSKELNALVNVHNKILNNVKDD 67

Query: 60  QSHPVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPR 119
           +  PVLSN+M I +EVLD+L ++  ++ DCKELF LLQ+P++QGLLCAHDAVAQKDYYPR
Sbjct: 68  KFFPVLSNSMDIDVEVLDLLSTKTHVSSDCKELFHLLQKPHIQGLLCAHDAVAQKDYYPR 127

Query: 120 LPEIPQELVDDEEETVKIVQLVKSNEPLG---------ATIKTDEESGKIVVARVMHGGA 170
           LP+IP E VD++EETVKIVQLVKSNEPLG         ATIKT E +GKIV+AR+MHGGA
Sbjct: 128 LPDIPLE-VDEDEETVKIVQLVKSNEPLGDAGVEPIVGATIKTCEITGKIVIARIMHGGA 186

Query: 171 ADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRV 230
           ADRSGLIHVGDEVCEVNGI+VEGKTP  VL ILQ+SEGTITFK++PAD+K G RESK+RV
Sbjct: 187 ADRSGLIHVGDEVCEVNGISVEGKTPSFVLHILQNSEGTITFKIVPADSKSGIRESKVRV 246

Query: 231 RAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +AHF Y A+ DPYIPCK+AGL F KGD+LH+VSQDDAYW
Sbjct: 247 KAHFSYVAADDPYIPCKEAGLDFVKGDVLHIVSQDDAYW 285

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328708439|ref|XP_001945124.2| PREDICTED: MAGUK p55 subfamily member 7-like [Acyrthosiphon pisum]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/277 (66%), Positives = 228/277 (82%), Gaps = 17/277 (6%)

Query: 9   FDISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNE-----QSHP 63
           FD +++ LLE+L  S+   SA+ EEL FLS+LLQSKEL+AL  V+N+IV+      +  P
Sbjct: 12  FDPALAGLLESLVGSRDAISASKEELDFLSNLLQSKELHALFKVYNTIVDRVRDDRRCSP 71

Query: 64  VLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEI 123
           VLS++MQ +L+V++V+L R++L+D  ++LF LLQ P++QGLLCAHDAVAQKDY PRLP+I
Sbjct: 72  VLSSSMQTTLDVMEVILPRISLSDTSRQLFQLLQNPHIQGLLCAHDAVAQKDYLPRLPDI 131

Query: 124 PQELVDDEEETVKIVQLVKSNEPL-----------GATIKTDEESGKIVVARVMHGGAAD 172
           PQE+ D++EET+KIVQLVKS EPL           GATIKTDEE+GKI++ARVMHGGAAD
Sbjct: 132 PQEM-DEDEETIKIVQLVKSTEPLDGEPDSAEPIVGATIKTDEENGKIIIARVMHGGAAD 190

Query: 173 RSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRA 232
           RSGLI+VGDEVCEVNGINVEGK+P DVL+ILQ SEGTITFKLIPAD K G RESK++VRA
Sbjct: 191 RSGLINVGDEVCEVNGINVEGKSPADVLQILQHSEGTITFKLIPADPKNGSRESKMKVRA 250

Query: 233 HFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           HFD++   DPYIPCK+AGLSF KG++LH+VSQDD YW
Sbjct: 251 HFDFNTDVDPYIPCKEAGLSFAKGEVLHIVSQDDPYW 287

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235447|ref|XP_001813092.1| PREDICTED: similar to membrane-associated guanylate kinase (maguk) [Tribolium castaneum]

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 175/255 (68%), Positives = 217/255 (85%), Gaps = 15/255 (5%)

Query: 29  ANDEELLFLSSLLQSKELNALVHVHNSIVN----EQSHPVLSNAMQISLEVLDVLLSRLA 84
           + +E+L FLS LLQSKEL+ALV+VHN I++    ++  P+LS +M + ++VL+VL ++L 
Sbjct: 22  STEEDLGFLSELLQSKELHALVNVHNKIISNGASDKFFPMLSTSMHVMVDVLEVLAAKLQ 81

Query: 85  LNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSN 144
           ++++CKELF LLQ+P++QGLL +HDA+AQKDYYP LPEIPQE  D++EET+KIVQLVKSN
Sbjct: 82  VSEECKELFYLLQKPHVQGLLYSHDAIAQKDYYPHLPEIPQE-ADEDEETIKIVQLVKSN 140

Query: 145 EPL----------GATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           EPL          GATIKTDEE+GKI++ARVMHGGAADRSGLIHVGDEV EVN INVEGK
Sbjct: 141 EPLTGAQSAEPIVGATIKTDEETGKIIIARVMHGGAADRSGLIHVGDEVVEVNYINVEGK 200

Query: 195 TPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFN 254
           TP DVL ILQ+SEGTITFKL+PAD+K+  RESK+RVRAHFDY+AS+DPYIPCK+AGL F 
Sbjct: 201 TPNDVLSILQNSEGTITFKLVPADSKMNVRESKVRVRAHFDYEASNDPYIPCKEAGLDFR 260

Query: 255 KGDILHVVSQDDAYW 269
           KGD+LH+VSQDDAYW
Sbjct: 261 KGDVLHIVSQDDAYW 275

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322795210|gb|EFZ18032.1| hypothetical protein SINV_10126 [Solenopsis invicta]

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 184/272 (67%), Positives = 225/272 (82%), Gaps = 15/272 (5%)

Query: 12  SVSSLLETLQESQSTF-SANDEELLFLSSLLQSKELNALVHVHNSIVN----EQSHPVLS 66
           ++S LL +LQE+++   S  +EE  FLS LLQSKELNALV+VHN I+N    ++  PVLS
Sbjct: 2   ALSKLLNSLQENKTEIPSCTEEEFGFLSELLQSKELNALVNVHNKILNNLKNDKFFPVLS 61

Query: 67  NAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQE 126
           N+M I+ ++L++L S++ ++ + KELF LLQ+P+LQGLLCAHDAVAQKDY+PRLPEIP E
Sbjct: 62  NSMDINADILNLLKSKMHISSEFKELFYLLQKPHLQGLLCAHDAVAQKDYHPRLPEIPLE 121

Query: 127 LVDDEEETVKIVQLVKSNEPLG---------ATIKTDEESGKIVVARVMHGGAADRSGLI 177
            VD++EETVKIVQLVKSNEPLG         ATIKT EE+GKIV+AR+MHGGAADRSGLI
Sbjct: 122 -VDEDEETVKIVQLVKSNEPLGEAGVEPIVGATIKTCEETGKIVIARIMHGGAADRSGLI 180

Query: 178 HVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYD 237
           HVGDEV EVNGI+VEGKTP  VL ILQ+SEGTITFK++PAD+K G RESK+RV+AHF Y 
Sbjct: 181 HVGDEVIEVNGISVEGKTPSFVLHILQNSEGTITFKIVPADSKSGVRESKVRVKAHFSYV 240

Query: 238 ASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           A+ DPYIPCK+AGL F KGD+LH+VSQDDAYW
Sbjct: 241 AADDPYIPCKEAGLDFVKGDVLHIVSQDDAYW 272

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221330166|ref|NP_001137643.1| menage a trois, isoform C [Drosophila melanogaster] gi|220902176|gb|ACL83097.1| menage a trois, isoform C [Drosophila melanogaster]

 Score =  362 bits (930), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 178/265 (67%), Positives = 218/265 (82%), Gaps = 7/265 (2%)

Query: 9   FDISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIV----NEQSHPV 64
           +D ++S L+ TL+ES++   +ND+E+ FL +LL+SKELNALV+VH  +     +++  PV
Sbjct: 12  WDPALSKLISTLKESENL--SNDQEIDFLKALLESKELNALVNVHTKVAKVGRDDRLAPV 69

Query: 65  LSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIP 124
           LS + Q+  EVL+ L     LNDDCKE F LLQ  +LQ LL AHDA+AQKD+YP LPE P
Sbjct: 70  LSTSAQVLYEVLEQLSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDAIAQKDFYPHLPEAP 129

Query: 125 QELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVC 184
            E+ D++EET+KIVQLVKSNEPLGATIKTDEESGKI++AR+MHGGAADRSGLIHVGDEV 
Sbjct: 130 VEM-DEDEETIKIVQLVKSNEPLGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVI 188

Query: 185 EVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYI 244
           EVN INVEGKTPGDVL ILQ+SEGTITFKL+PADNK   RESK+RVRAHFDY+   DPYI
Sbjct: 189 EVNNINVEGKTPGDVLTILQNSEGTITFKLVPADNKGAQRESKVRVRAHFDYNPDVDPYI 248

Query: 245 PCKDAGLSFNKGDILHVVSQDDAYW 269
           PCK+AGL+F +GD+LH+V+QDDAYW
Sbjct: 249 PCKEAGLAFQRGDVLHIVAQDDAYW 273

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195119688|ref|XP_002004361.1| GI19661 [Drosophila mojavensis] gi|193909429|gb|EDW08296.1| GI19661 [Drosophila mojavensis]

 Score =  355 bits (912), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 177/275 (64%), Positives = 219/275 (79%), Gaps = 17/275 (6%)

Query: 9   FDISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIV----NEQSHPV 64
           +D ++S L+ TL+ES +   +ND+E+ FL +LL+SKELNALV+VH  +     +E+  PV
Sbjct: 12  WDPALSKLITTLKESDNL--SNDQEIDFLKALLESKELNALVNVHTKVAKVGRDERLAPV 69

Query: 65  LSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIP 124
           LS + Q+  EVL+ L  R  LN+DCKE F LLQ  ++Q LL AHDA+AQKD+YP LPE+P
Sbjct: 70  LSTSSQVLYEVLEQLSQRCHLNEDCKEAFHLLQDSHIQHLLLAHDAIAQKDFYPHLPEVP 129

Query: 125 QELVDDEEETVKIVQLVKSNEPL----------GATIKTDEESGKIVVARVMHGGAADRS 174
            E+ D++EET+KIVQLVKSNEPL          GATIKTDEE+GKI++AR+MHGGAADRS
Sbjct: 130 IEM-DEDEETIKIVQLVKSNEPLTGAQSAEPIVGATIKTDEETGKIIIARIMHGGAADRS 188

Query: 175 GLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHF 234
           GLIHVGDEV EVNGINVEGKTPGDVL ILQ+SEGTITFKL+PAD K   RESK+RVRAHF
Sbjct: 189 GLIHVGDEVIEVNGINVEGKTPGDVLTILQNSEGTITFKLVPADTKGAQRESKVRVRAHF 248

Query: 235 DYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           DY+   DPYIPCK+AGL+F +GD+LH+V+QDDAYW
Sbjct: 249 DYNPDVDPYIPCKEAGLAFQRGDVLHIVAQDDAYW 283

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
FB|FBgn0050021	595	metro "menage a trois" [Drosop	0.825	0.373	0.675	3.7e-80
RGD|1305675	576	Mpp7 "membrane protein, palmit	0.821	0.383	0.524	2.8e-57
UNIPROTKB|F1LQK7	536	Mpp7 "MAGUK p55 subfamily memb	0.821	0.412	0.524	2.8e-57
MGI|MGI:1922989	576	Mpp7 "membrane protein, palmit	0.821	0.383	0.519	3.6e-57
UNIPROTKB|Q5T2T1	576	MPP7 "MAGUK p55 subfamily memb	0.821	0.383	0.515	4.6e-57
UNIPROTKB|A6QQZ7	576	MPP7 "MAGUK p55 subfamily memb	0.821	0.383	0.519	7.5e-57
UNIPROTKB|E1C6B7	576	MPP7 "Uncharacterized protein"	0.821	0.383	0.524	9.6e-57
UNIPROTKB|F1P8X0	576	MPP7 "Uncharacterized protein"	0.821	0.383	0.519	1.2e-56
UNIPROTKB|F1RVJ7	536	MPP7 "Uncharacterized protein"	0.821	0.412	0.519	3.3e-56
ZFIN|ZDB-GENE-991209-8	576	mpp7 "membrane protein, palmit	0.821	0.383	0.493	2.1e-54

FB|FBgn0050021 metro "menage a trois" [Drosophila melanogaster (taxid:7227)]

 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 160/237 (67%), Positives = 188/237 (79%)

Query:    47 NALVHVHNSIV----NEQSHPVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQ 102
             NALV+VH  +     +++  PVLS + Q+  EVL+ L     LNDDCKE F LLQ  +LQ
Sbjct:    48 NALVNVHTKVAKVGRDDRLAPVLSTSAQVLYEVLEQLSQHCHLNDDCKEAFHLLQDSHLQ 107

Query:   103 GLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPL----------GATIK 152
              LL AHDA+AQKD+YP LPE P E+ D++EET+KIVQLVKSNEPL          GATIK
Sbjct:   108 HLLFAHDAIAQKDFYPHLPEAPVEM-DEDEETIKIVQLVKSNEPLTGAQSTEPIVGATIK 166

Query:   153 TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF 212
             TDEESGKI++AR+MHGGAADRSGLIHVGDEV EVN INVEGKTPGDVL ILQ+SEGTITF
Sbjct:   167 TDEESGKIIIARIMHGGAADRSGLIHVGDEVIEVNNINVEGKTPGDVLTILQNSEGTITF 226

Query:   213 KLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             KL+PADNK   RESK+RVRAHFDY+   DPYIPCK+AGL+F +GD+LH+V+QDDAYW
Sbjct:   227 KLVPADNKGAQRESKVRVRAHFDYNPDVDPYIPCKEAGLAFQRGDVLHIVAQDDAYW 283

GO:0005886 "plasma membrane" evidence=ISS

GO:0004385 "guanylate kinase activity" evidence=ISS

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0008582 "regulation of synaptic growth at neuromuscular junction" evidence=IMP

GO:0071212 "subsynaptic reticulum" evidence=IDA

RGD|1305675 Mpp7 "membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)" [Rattus norvegicus (taxid:10116)]

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 119/227 (52%), Positives = 163/227 (71%)

Query:    47 NALVHVHNSI--VNEQSH-PVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQG 103
             ++LV +H  +    +QS  P+L  A  ++ ++ D L ++   N + +EL  LL +PN++ 
Sbjct:    48 HSLVKIHEKLHYYEKQSPVPILHGAAALADDLADELQNKPP-NSEIRELLKLLSKPNVKA 106

Query:   104 LLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVA 163
             LL  HD VAQK Y P LP +P + +DDEE++VKI++LVK+ EPLGATIK DE++G I VA
Sbjct:   107 LLSVHDTVAQKSYDPVLPPMPDD-IDDEEDSVKIIRLVKNREPLGATIKKDEQTGAITVA 165

Query:   164 RVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNK-LG 222
             R+M GGAADRSGLIHVGDE+ EVNGI VE K P ++++IL  S+G ITFK+IP+  + + 
Sbjct:   166 RIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILSQSQGAITFKIIPSTKEEIP 225

Query:   223 YRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              +E KI ++A FDYD   D  IPCK+AGLSF KGDIL ++SQDDA W
Sbjct:   226 SKEGKIFIKALFDYDPKEDKAIPCKEAGLSFRKGDILQIMSQDDATW 272

GO:0005912 "adherens junction" evidence=ISO

GO:0005923 "tight junction" evidence=IEA;ISO

GO:0019904 "protein domain specific binding" evidence=IEA;ISO

GO:0031334 "positive regulation of protein complex assembly" evidence=ISO

GO:0032947 "protein complex scaffold" evidence=IEA;ISO

GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO

GO:0070830 "tight junction assembly" evidence=IEA;ISO

GO:0071896 "protein localization to adherens junction" evidence=IEA;ISO

GO:0097025 "MPP7-DLG1-LIN7 complex" evidence=IEA;ISO

UNIPROTKB|F1LQK7 Mpp7 "MAGUK p55 subfamily member 7" [Rattus norvegicus (taxid:10116)]

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 119/227 (52%), Positives = 163/227 (71%)

Query:    47 NALVHVHNSI--VNEQSH-PVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQG 103
             ++LV +H  +    +QS  P+L  A  ++ ++ D L ++   N + +EL  LL +PN++ 
Sbjct:     8 HSLVKIHEKLHYYEKQSPVPILHGAAALADDLADELQNKPP-NSEIRELLKLLSKPNVKA 66

Query:   104 LLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVA 163
             LL  HD VAQK Y P LP +P + +DDEE++VKI++LVK+ EPLGATIK DE++G I VA
Sbjct:    67 LLSVHDTVAQKSYDPVLPPMPDD-IDDEEDSVKIIRLVKNREPLGATIKKDEQTGAITVA 125

Query:   164 RVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNK-LG 222
             R+M GGAADRSGLIHVGDE+ EVNGI VE K P ++++IL  S+G ITFK+IP+  + + 
Sbjct:   126 RIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILSQSQGAITFKIIPSTKEEIP 185

Query:   223 YRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              +E KI ++A FDYD   D  IPCK+AGLSF KGDIL ++SQDDA W
Sbjct:   186 SKEGKIFIKALFDYDPKEDKAIPCKEAGLSFRKGDILQIMSQDDATW 232

GO:0005923 "tight junction" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0046982 "protein heterodimerization activity" evidence=IEA

GO:0070830 "tight junction assembly" evidence=IEA

GO:0071896 "protein localization to adherens junction" evidence=IEA

GO:0097025 "MPP7-DLG1-LIN7 complex" evidence=IEA

MGI|MGI:1922989 Mpp7 "membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)" [Mus musculus (taxid:10090)]

 Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
 Identities = 118/227 (51%), Positives = 163/227 (71%)

Query:    47 NALVHVHNSI--VNEQSH-PVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQG 103
             ++LV +H  +    +Q+  P+L  A  ++ ++ + L ++L  N + +EL  LL +PN++ 
Sbjct:    48 HSLVKIHEKLHCYEKQNPLPILHGAAALADDLTEELQNKLP-NSEIRELLKLLSKPNVKA 106

Query:   104 LLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVA 163
             LL  HD VAQK Y P LP +P + +DDEE++VKI++LVK++EPLGATIK DE++G I VA
Sbjct:   107 LLSVHDTVAQKSYDPVLPPVPDD-IDDEEDSVKIIRLVKNSEPLGATIKKDEQTGAITVA 165

Query:   164 RVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNK-LG 222
             R+M GGAADRSGLIHVGDE+ EVNGI VE K P +++KIL  S+G ITFK+IP+  +   
Sbjct:   166 RIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIKILSQSKGAITFKIIPSTKEETP 225

Query:   223 YRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              +E KI ++A FDYD   D  IPCK+AGLSF KGDIL ++SQDD  W
Sbjct:   226 SKEGKIFIKALFDYDPKEDKAIPCKEAGLSFRKGDILQIMSQDDVTW 272

GO:0005912 "adherens junction" evidence=ISO

GO:0005923 "tight junction" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0031334 "positive regulation of protein complex assembly" evidence=ISO

GO:0032947 "protein complex scaffold" evidence=ISO

GO:0046982 "protein heterodimerization activity" evidence=ISO

GO:0070830 "tight junction assembly" evidence=ISO

GO:0071896 "protein localization to adherens junction" evidence=ISO

GO:0097025 "MPP7-DLG1-LIN7 complex" evidence=ISO

UNIPROTKB|Q5T2T1 MPP7 "MAGUK p55 subfamily member 7" [Homo sapiens (taxid:9606)]

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 117/227 (51%), Positives = 166/227 (73%)

Query:    47 NALVHVHNSI--VNEQSH-PVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQG 103
             ++LV +H  +    +QS  P+L  A  ++ ++ + L ++  LN + +EL  LL +PN++ 
Sbjct:    48 HSLVKIHEKLHYYEKQSPVPILHGAAALADDLAEELQNK-PLNSEIRELLKLLSKPNVKA 106

Query:   104 LLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVA 163
             LL  HD VAQK+Y P LP +P++ +DDEE++VKI++LVK+ EPLGATIK DE++G I+VA
Sbjct:   107 LLSVHDTVAQKNYDPVLPPMPED-IDDEEDSVKIIRLVKNREPLGATIKKDEQTGAIIVA 165

Query:   164 RVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNK-LG 222
             R+M GGAADRSGLIHVGDE+ EVNGI VE K P ++++IL  S+G ITFK+IP   +   
Sbjct:   166 RIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPGSKEETP 225

Query:   223 YRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              +E K+ ++A FDY+ + D  IPCK+AGLSF KGDIL ++SQDDA W
Sbjct:   226 SKEGKMFIKALFDYNPNEDKAIPCKEAGLSFKKGDILQIMSQDDATW 272

GO:0005912 "adherens junction" evidence=IDA

GO:0031334 "positive regulation of protein complex assembly" evidence=IDA;TAS

GO:0019904 "protein domain specific binding" evidence=IPI

GO:0032947 "protein complex scaffold" evidence=IDA

GO:0035591 "signaling adaptor activity" evidence=NAS;TAS

GO:0071896 "protein localization to adherens junction" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0030010 "establishment of cell polarity" evidence=TAS

GO:0005923 "tight junction" evidence=IDA

GO:0070830 "tight junction assembly" evidence=IDA

GO:0097025 "MPP7-DLG1-LIN7 complex" evidence=IDA

GO:0046982 "protein heterodimerization activity" evidence=IDA

GO:0009967 "positive regulation of signal transduction" evidence=NAS;TAS

UNIPROTKB|A6QQZ7 MPP7 "MAGUK p55 subfamily member 7" [Bos taurus (taxid:9913)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 118/227 (51%), Positives = 166/227 (73%)

Query:    47 NALVHVHNSI-VNEQSHPV--LSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQG 103
             ++LV +H  +   E+ +PV  L  A  ++ ++ + L ++  LN + +EL  LL +PN++ 
Sbjct:    48 HSLVKIHEKLHYYEKQNPVPILQGAAALADDLAEELQNK-PLNSEIRELLKLLSKPNVKA 106

Query:   104 LLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVA 163
             LL  HD VAQK+Y P LP +P + +D+EE++VKI++LVK+ EPLGATIK DE++G IVVA
Sbjct:   107 LLSVHDTVAQKNYDPVLPPMPDD-IDNEEDSVKIIRLVKNREPLGATIKKDEQTGAIVVA 165

Query:   164 RVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPA-DNKLG 222
             R+M GGAADRSGLIHVGDE+ EVNGI VE K P ++++IL  S+G ITFK+IP+   +  
Sbjct:   166 RIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPSIKEETP 225

Query:   223 YRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              +E K+ ++A FDYD + D  IPCK+AGLSF KGDIL ++SQDDA W
Sbjct:   226 SKEGKMFIKALFDYDPNEDKAIPCKEAGLSFKKGDILQIMSQDDATW 272

GO:0005923 "tight junction" evidence=IEA

GO:0097025 "MPP7-DLG1-LIN7 complex" evidence=IEA

GO:0071896 "protein localization to adherens junction" evidence=IEA

GO:0070830 "tight junction assembly" evidence=IEA

GO:0046982 "protein heterodimerization activity" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

UNIPROTKB|E1C6B7 MPP7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
 Identities = 119/227 (52%), Positives = 164/227 (72%)

Query:    47 NALVHVHNSI-VNEQSHPV--LSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQG 103
             ++LV +H  +   E+ +PV  L  A  ++ ++ + L S+  LN + +EL  LL +PNL+ 
Sbjct:    48 HSLVKIHEKLHYYEKQNPVPILHGAAALADDLAEELQSK-PLNSEIRELLKLLSKPNLKA 106

Query:   104 LLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVA 163
             LL  HD VAQK+Y P LP +P + +D+EE++VKI++LVK+ EPLGATIK DE +G IVVA
Sbjct:   107 LLSVHDTVAQKNYDPVLPPMPDD-IDEEEDSVKIIRLVKNREPLGATIKRDEHTGAIVVA 165

Query:   164 RVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPA-DNKLG 222
             R+M GGAADRSGLIHVGDE+ EVNGI V+ K P +++ IL  S+G ITFK+IP+   +  
Sbjct:   166 RIMRGGAADRSGLIHVGDELREVNGIPVDDKKPEEIIHILAQSQGAITFKIIPSVKEETP 225

Query:   223 YRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              +E K+ +RA FDYD + D  IPCK+AGL+F KGDIL ++SQDDA W
Sbjct:   226 SKEGKMFIRALFDYDPNEDKAIPCKEAGLAFRKGDILQIMSQDDATW 272

GO:0005923 "tight junction" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0046982 "protein heterodimerization activity" evidence=IEA

GO:0070830 "tight junction assembly" evidence=IEA

GO:0071896 "protein localization to adherens junction" evidence=IEA

GO:0097025 "MPP7-DLG1-LIN7 complex" evidence=IEA

UNIPROTKB|F1P8X0 MPP7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 118/227 (51%), Positives = 166/227 (73%)

Query:    47 NALVHVHNSI-VNEQSHPV--LSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQG 103
             ++LV +H  +   E+ +PV  L  A  ++ ++ + L ++  LN + +EL  LL +PN++ 
Sbjct:    48 HSLVKIHEKLHYYEKQNPVPILHGAAVLADDLAEELQNK-PLNSEIRELLKLLSKPNVKA 106

Query:   104 LLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVA 163
             LL  HD VAQK+Y P LP +P + +DDEE++VKI++LVK+ EPLGATIK DE++G IVVA
Sbjct:   107 LLSVHDTVAQKNYDPVLPPMPDD-IDDEEDSVKIIRLVKNREPLGATIKKDEQTGAIVVA 165

Query:   164 RVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPA-DNKLG 222
             R+M GGAADRSGLIHVGDE+ EVNGI VE K P ++++IL  S+G ITFK+IP+   +  
Sbjct:   166 RIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPSIKEETP 225

Query:   223 YRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              +E K+ ++A FDY+ + D  IPCK+AGLSF KGDIL ++SQDDA W
Sbjct:   226 SKEGKMFIKALFDYNPNEDKAIPCKEAGLSFKKGDILQIMSQDDATW 272

GO:0097025 "MPP7-DLG1-LIN7 complex" evidence=IEA

GO:0071896 "protein localization to adherens junction" evidence=IEA

GO:0070830 "tight junction assembly" evidence=IEA

GO:0046982 "protein heterodimerization activity" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0005923 "tight junction" evidence=IEA

UNIPROTKB|F1RVJ7 MPP7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 118/227 (51%), Positives = 165/227 (72%)

Query:    47 NALVHVHNSI--VNEQSH-PVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQG 103
             ++LV +H  +    +QS  P+L  A  ++ ++ + L +   L+ + +EL  LL +PN++ 
Sbjct:     8 HSLVKIHEKLHDYEKQSPVPILQGAAALADDLAEELQNG-PLSSETRELLKLLSKPNVKA 66

Query:   104 LLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVA 163
             LL AHD VAQK Y P LP +P++ +DDEE++VKI++LVK+ EPLGATIK DE++G IVVA
Sbjct:    67 LLSAHDTVAQKSYDPVLPPMPED-IDDEEDSVKIIRLVKNREPLGATIKKDEQTGAIVVA 125

Query:   164 RVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPA-DNKLG 222
             R+M GGAADRSGLIHVGDE+ EVNGI VE K P ++++IL  S+G ITFK+IP+   +  
Sbjct:   126 RIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPSIKEETP 185

Query:   223 YRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              +E K+ ++A FDYD   D  IPCK+AGLSF +G+IL +VSQDDA W
Sbjct:   186 AKEGKMFLKALFDYDPYEDKAIPCKEAGLSFKRGEILQIVSQDDATW 232

GO:0097025 "MPP7-DLG1-LIN7 complex" evidence=IEA

GO:0071896 "protein localization to adherens junction" evidence=IEA

GO:0070830 "tight junction assembly" evidence=IEA

GO:0046982 "protein heterodimerization activity" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0005923 "tight junction" evidence=IEA

ZFIN|ZDB-GENE-991209-8 mpp7 "membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)" [Danio rerio (taxid:7955)]

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 112/227 (49%), Positives = 162/227 (71%)

Query:    47 NALVHVHNSIVNEQS---HPVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQG 103
             ++LV +H  +   +     PVL +A  ++ ++ + L +R A N+  +EL  LL +P+++ 
Sbjct:    48 HSLVKIHEKLQCYEDCAPTPVLDSAGSLAADLTEELQARSASNE-IRELVKLLSKPHVKS 106

Query:   104 LLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVA 163
             LL  HD VA+K Y P LP +P + +DDEE++VKI++LVK+ EPLGATIK DE +G I+VA
Sbjct:   107 LLSVHDTVAKKSYDPELPPLPDD-IDDEEDSVKIIRLVKNKEPLGATIKKDEHTGAILVA 165

Query:   164 RVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPA-DNKLG 222
             R++ GGAADRSGLIHVGDE+ EVNGI V+ K P ++++IL  S+G ITFK++P   ++  
Sbjct:   166 RILRGGAADRSGLIHVGDELKEVNGIPVDDKKPEEIIRILSQSQGAITFKVVPGIKDEAQ 225

Query:   223 YRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              +E K+ ++A FDY+ + D  IPCK+AGL F KGDIL V+SQDDA W
Sbjct:   226 SKEPKMFIKALFDYNPAEDKAIPCKEAGLGFKKGDILQVMSQDDATW 272

GO:0005923 "tight junction" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0005912 "adherens junction" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	269
cd11862	61	cd11862, SH3_MPP, Src Homology 3 domain of Membran	9e-24
cd12036	63	cd12036, SH3_MPP5, Src Homology 3 domain of Membra	2e-19
cd00992	82	cd00992, PDZ_signaling, PDZ domain found in a vari	4e-18
smart00228	85	smart00228, PDZ, Domain present in PSD-95, Dlg, an	1e-16
cd12037	59	cd12037, SH3_MPP2, Src Homology 3 domain of Membra	1e-14
cd12035	62	cd12035, SH3_MPP1-like, Src Homology 3 domain of M	5e-14
cd12033	61	cd12033, SH3_MPP7, Src Homology 3 domain of Membra	6e-14
cd12034	61	cd12034, SH3_MPP4, Src Homology 3 domain of Membra	2e-12
cd12038	61	cd12038, SH3_MPP6, Src Homology 3 domain of Membra	4e-12
cd12080	62	cd12080, SH3_MPP1, Src Homology 3 domain of Membra	6e-12
cd12081	62	cd12081, SH3_CASK, Src Homology 3 domain of Calciu	1e-11
cd00136	70	cd00136, PDZ, PDZ domain, also called DHR (Dlg hom	2e-11
cd12039	62	cd12039, SH3_MPP3, Src Homology 3 domain of Membra	3e-11
cd00988	85	cd00988, PDZ_CTP_protease, PDZ domain of C-termina	4e-10
pfam00595	80	pfam00595, PDZ, PDZ domain (Also known as DHR or G	6e-10
cd11861	61	cd11861, SH3_DLG-like, Src Homology 3 domain of Di	4e-09
smart00326	56	smart00326, SH3, Src homology 3 domains	4e-07
smart00569	53	smart00569, L27, domain in receptor targeting prot	9e-07
cd12029	67	cd12029, SH3_DLG3, Src Homology 3 domain of Disks	1e-06
cd12032	74	cd12032, SH3_DLG2, Src Homology 3 domain of Disks	2e-06
COG0793	406	COG0793, Prc, Periplasmic protease [Cell envelope	4e-06
cd00990	80	cd00990, PDZ_glycyl_aminopeptidase, PDZ domain ass	5e-06
cd12031	67	cd12031, SH3_DLG1, Src Homology 3 domain of Disks	7e-06
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	8e-06
cd11883	55	cd11883, SH3_Sdc25, Src Homology 3 domain of Sdc25	1e-04
cd11859	62	cd11859, SH3_ZO, Src homology 3 domain of the Tigh	3e-04
cd11837	53	cd11837, SH3_Intersectin_2, Second Src homology 3	4e-04
pfam07653	53	pfam07653, SH3_2, Variant SH3 domain	5e-04
cd00989	79	cd00989, PDZ_metalloprotease, PDZ domain of bacter	5e-04
cd00987	90	cd00987, PDZ_serine_protease, PDZ domain of tryspi	7e-04
pfam13180	81	pfam13180, PDZ_2, PDZ domain	7e-04
smart00569	53	smart00569, L27, domain in receptor targeting prot	0.001
cd11949	53	cd11949, SH3_GRB2_C, C-terminal Src homology 3 dom	0.001
pfam00018	47	pfam00018, SH3_1, SH3 domain	0.001
cd12061	54	cd12061, SH3_betaPIX, Src Homology 3 domain of bet	0.002
TIGR00225	334	TIGR00225, prc, C-terminal peptidase (prc)	0.002
cd11772	53	cd11772, SH3_OSTF1, Src Homology 3 domain of metaz	0.004

>gnl|CDD|212796 cd11862, SH3_MPP, Src Homology 3 domain of Membrane Protein, Palmitoylated (or MAGUK p55 subfamily member) proteins

 Score = 90.7 bits (226), Expect = 9e-24
 Identities = 28/41 (68%), Positives = 31/41 (75%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            VRA FDYD   DP IPCK+AGLSF KGDIL +V+QDD  W
Sbjct: 1   FVRALFDYDPEEDPLIPCKEAGLSFKKGDILQIVNQDDPNW 41

The MPP/p55 subfamily of MAGUK (membrane-associated guanylate kinase) proteins includes at least eight vertebrate members (MPP1-7 and CASK), four Drosophila proteins (Stardust, Varicose, CASK and Skiff), and other similar proteins; they all contain one each of the core of three domains characteristic of MAGUK proteins: PDZ, SH3, and guanylate kinase (GuK). In addition, most members except for MPP1 contain N-terminal L27 domains and some also contain a Hook (Protein 4.1 Binding) motif in between the SH3 and GuK domains. CASK has an additional calmodulin-dependent kinase (CaMK)-like domain at the N-terminus. Members of this subfamily are scaffolding proteins that play important roles in regulating and establishing cell polarity, cell adhesion, and synaptic targeting and transmission, among others. The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

>gnl|CDD|212969 cd12036, SH3_MPP5, Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)

 Score = 79.0 bits (195), Expect = 2e-19
 Identities = 29/40 (72%), Positives = 33/40 (82%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           VRAHFDYD   DPYIPC++ GLSF KGDILHV+SQ+D  W
Sbjct: 2   VRAHFDYDPEDDPYIPCRELGLSFQKGDILHVISQEDPNW 41

MPP5, also called PALS1 (Protein associated with Lin7) or Nagie oko protein in zebrafish or Stardust in Drosophila, is a scaffolding protein which associates with Crumbs homolog 1 (CRB1), CRB2, or CRB3 through its PDZ domain and with PALS1-associated tight junction protein (PATJ) or multi-PDZ domain protein 1 (MUPP1) through its L27 domain. The resulting tri-protein complexes are core proteins of the Crumb complex, which localizes at tight junctions or subapical regions, and is involved in the maintenance of apical-basal polarity in epithelial cells and the morphogenesis and function of photoreceptor cells. MPP5 is critical for the proper stratification of the retina and is also expressed in T lymphocytes where it is important for TCR-mediated activation of NFkB. Drosophila Stardust exists in several isoforms, some of which show opposing functions in photoreceptor cells, which suggests that the relative ratio of different Crumbs complexes regulates photoreceptor homeostasis. MPP5 contains two L27 domains followed by the core of three domains characteristic of MAGUK (membrane-associated guanylate kinase) proteins: PDZ, SH3, and guanylate kinase (GuK). In addition, it also contains the Hook (Protein 4.1 Binding) motif in between the SH3 and GuK domains. The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 63

>gnl|CDD|238492 cd00992, PDZ_signaling, PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements

 Score = 76.5 bits (189), Expect = 4e-18
 Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 3/83 (3%)

Query: 135 VKIVQLVKS-NEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVE 192
           V+ V L K     LG +++  ++SG  I V+RV  GG A+R GL  VGD + EVNG++VE
Sbjct: 1   VRTVTLRKDPGGGLGFSLRGGKDSGGGIFVSRVEPGGPAERGGL-RVGDRILEVNGVSVE 59

Query: 193 GKTPGDVLKILQSSEGTITFKLI 215
           G T  + +++L++S   +T  + 
Sbjct: 60  GLTHEEAVELLKNSGDEVTLTVR 82

May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of PDZ domains an N-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in proteases. Length = 82

>gnl|CDD|214570 smart00228, PDZ, Domain present in PSD-95, Dlg, and ZO-1/2

 Score = 72.8 bits (179), Expect = 1e-16
 Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 135 VKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
            ++V+L K    LG ++   ++ G  +VV+ V+ G  A ++GL  VGD + EVNG +VEG
Sbjct: 2   PRLVELEKGGGGLGFSLVGGKDEGGGVVVSSVVPGSPAAKAGL-RVGDVILEVNGTSVEG 60

Query: 194 KTPGDVLKILQSSEGTITFKLIP 216
            T  + + +L+ + G +T  ++ 
Sbjct: 61  LTHLEAVDLLKKAGGKVTLTVLR 83

Also called DHR (Dlg homologous region) or GLGF (relatively well conserved tetrapeptide in these domains). Some PDZs have been shown to bind C-terminal polypeptides; others appear to bind internal (non-C-terminal) polypeptides. Different PDZs possess different binding specificities. Length = 85

>gnl|CDD|212970 cd12037, SH3_MPP2, Src Homology 3 domain of Membrane Protein, Palmitoylated 2 (or MAGUK p55 subfamily member 2)

 Score = 66.1 bits (161), Expect = 1e-14
 Identities = 24/40 (60%), Positives = 30/40 (75%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           V+ HFDYD SSD  IPCK+AGL F  GD+L +V+Q+D  W
Sbjct: 2   VKCHFDYDPSSDSLIPCKEAGLKFRAGDLLQIVNQEDPNW 41

MPP2 is a scaffolding protein that interacts with the non-receptor tyrosine kinase c-Src in epithelial cells to negatively regulate its activity and morphological function. It is one of seven vertebrate homologs of the Drosophila Stardust protein, which is required in establishing cell polarity, and it contains two L27 domains followed by the core of three domains characteristic of MAGUK (membrane-associated guanylate kinase) proteins: PDZ, SH3, and guanylate kinase (GuK). In addition, it also contains the Hook (Protein 4.1 Binding) motif in between the SH3 and GuK domains. The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212968 cd12035, SH3_MPP1-like, Src Homology 3 domain of Membrane Protein, Palmitoylated 1 (or MAGUK p55 subfamily member 1)-like proteins

 Score = 65.1 bits (159), Expect = 5e-14
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           VRA FDYD S D  IPC+ AG++F  GDIL ++S+DD  W
Sbjct: 2   VRAQFDYDPSKDDLIPCQQAGIAFKTGDILQIISKDDHNW 41

This subfamily includes MPP1, CASK (Calcium/calmodulin-dependent Serine protein Kinase), Caenorhabditis elegans lin-2, and similar proteins. MPP1 and CASK are scaffolding proteins from the MAGUK (membrane-associated guanylate kinase) protein family, which is characterized by the presence of a core of three domains: PDZ, SH3, and guanylate kinase (GuK). In addition, they also have the Hook (Protein 4.1 Binding) motif in between the SH3 and GuK domains. The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. CASK and lin-2 also contain an N-terminal calmodulin-dependent kinase (CaMK)-like domain and two L27 domains. MPP1 is ubiquitously-expressed and plays roles in regulating neutrophil polarity, cell shape, hair cell development, and neural development and patterning of the retina. CASK is highly expressed in the mammalian nervous system and plays roles in synaptic protein targeting, neural development, and gene expression regulation. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|212966 cd12033, SH3_MPP7, Src Homology 3 domain of Membrane Protein, Palmitoylated 7 (or MAGUK p55 subfamily member 7)

 Score = 64.7 bits (157), Expect = 6e-14
 Identities = 25/40 (62%), Positives = 32/40 (80%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           ++A FDY+ + D  IPCK+AGLSF KGDIL ++SQDDA W
Sbjct: 2   IKALFDYNPNEDKAIPCKEAGLSFKKGDILQIMSQDDATW 41

MPP7 is a scaffolding protein that binds to DLG1 and promotes tight junction formation and epithelial cell polarity. Mutations in the MPP7 gene may be associated with the pathogenesis of diabetes and extreme bone mineral density. It is one of seven vertebrate homologs of the Drosophila Stardust protein, which is required in establishing cell polarity, and it contains two L27 domains followed by the core of three domains characteristic of MAGUK (membrane-associated guanylate kinase) proteins: PDZ, SH3, and guanylate kinase (GuK). The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

>gnl|CDD|212967 cd12034, SH3_MPP4, Src Homology 3 domain of Membrane Protein, Palmitoylated 4 (or MAGUK p55 subfamily member 4)

 Score = 60.7 bits (147), Expect = 2e-12
 Identities = 24/40 (60%), Positives = 27/40 (67%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           VRA  DY    DP IPC DAGL F KGDIL +V Q+D+ W
Sbjct: 2   VRAMVDYWPQQDPSIPCADAGLPFRKGDILQIVDQNDSLW 41

MPP4, also called Disks Large homolog 6 (DLG6) or Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 5 protein (ALS2CR5), is a retina-specific scaffolding protein that plays a role in organizing presynaptic protein complexes in the photoreceptor synapse, where it localizes to the plasma membrane. It is required in the proper localization of calcium ATPases and for maintenance of calcium homeostasis. MPP4 is one of seven vertebrate homologs of the Drosophila Stardust protein, which is required in establishing cell polarity, and it contains two L27 domains followed by the core of three domains characteristic of MAGUK (membrane-associated guanylate kinase) proteins: PDZ, SH3, and guanylate kinase (GuK). The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

>gnl|CDD|212971 cd12038, SH3_MPP6, Src Homology 3 domain of Membrane Protein, Palmitoylated 6 (or MAGUK p55 subfamily member 6)

 Score = 59.7 bits (144), Expect = 4e-12
 Identities = 21/40 (52%), Positives = 31/40 (77%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           V+ HFDY+  +D  IPCK+AGL F+KG+IL +V+++D  W
Sbjct: 2   VKCHFDYNPYNDNLIPCKEAGLKFSKGEILQIVNREDPNW 41

MPP6, also called Veli-associated MAGUK 1 (VAM-1) or PALS2, is a scaffolding protein that binds to Veli-1, a homolog of Caenorhabditis Lin-7. It is one of seven vertebrate homologs of the Drosophila Stardust protein, which is required in establishing cell polarity, and it contains two L27 domains followed by the core of three domains characteristic of MAGUK (membrane-associated guanylate kinase) proteins: PDZ, SH3, and guanylate kinase (GuK). In addition, it also contains the Hook (Protein 4.1 Binding) motif in between the SH3 and GuK domains. The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

>gnl|CDD|213013 cd12080, SH3_MPP1, Src Homology 3 domain of Membrane Protein, Palmitoylated 1 (or MAGUK p55 subfamily member 1)

 Score = 59.2 bits (143), Expect = 6e-12
 Identities = 21/40 (52%), Positives = 29/40 (72%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +RA FDYD   D  IPCK+AGL F  GDI+ ++++DD+ W
Sbjct: 2   MRAQFDYDPKKDNLIPCKEAGLKFQTGDIIQIINKDDSNW 41

MPP1, also called 55 kDa erythrocyte membrane protein (p55), is a ubiquitously-expressed scaffolding protein that plays roles in regulating neutrophil polarity, cell shape, hair cell development, and neural development and patterning of the retina. It was originally identified as an erythrocyte protein that stabilizes the actin cytoskeleton to the plasma membrane by forming a complex with 4.1R protein and glycophorin C. MPP1 is one of seven vertebrate homologs of the Drosophila Stardust protein, which is required in establishing cell polarity, and it contains the three domains characteristic of MAGUK (membrane-associated guanylate kinase) proteins: PDZ, SH3, and guanylate kinase (GuK). In addition, it also contains the Hook (Protein 4.1 Binding) motif in between the SH3 and GuK domains. The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|213014 cd12081, SH3_CASK, Src Homology 3 domain of Calcium/calmodulin-dependent Serine protein Kinase

 Score = 58.4 bits (141), Expect = 1e-11
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           VRA F+YD   D  IPCK AG+ F  GDIL ++S+DD  W
Sbjct: 2   VRAQFEYDPLKDDLIPCKQAGIRFRVGDILQIISKDDHNW 41

CASK is a scaffolding protein that is highly expressed in the mammalian nervous system and plays roles in synaptic protein targeting, neural development, and gene expression regulation. CASK interacts with many different binding partners including parkin, neurexin, syndecans, calcium channel proteins, caskin, among others, to perform specific functions in different subcellular locations. Disruption of the CASK gene in mice results in neonatal lethality while mutations in the human gene have been associated with X-linked mental retardation. Drosophila CASK is associated with both pre- and postsynaptic membranes and is crucial in synaptic transmission and vesicle cycling. CASK contains an N-terminal calmodulin-dependent kinase (CaMK)-like domain, two L27 domains, followed by the core of three domains characteristic of MAGUK (membrane-associated guanylate kinase) proteins: PDZ, SH3, and guanylate kinase (GuK). In addition, it also contains the Hook (Protein 4.1 Binding) motif in between the SH3 and GuK domains. The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|238080 cd00136, PDZ, PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif)

 Score = 58.1 bits (141), Expect = 2e-11
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 146 PLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS 205
            LG +I+   E G +VV  V  G  A+R+GL   GD +  VNG +V+  T  DV ++L+ 
Sbjct: 2   GLGFSIRGGTEGG-VVVLSVEPGSPAERAGL-QAGDVILAVNGTDVKNLTLEDVAELLKK 59

Query: 206 SEG-TITFKLI 215
             G  +T  + 
Sbjct: 60  EVGEKVTLTVR 70

Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. Heterodimerization through PDZ-PDZ domain interactions adds to the domain's versatility, and PDZ domain-mediated interactions may be modulated dynamically through target phosphorylation. Some PDZ domains play a role in scaffolding supramolecular complexes. PDZ domains are found in diverse signaling proteins in bacteria, archebacteria, and eurkayotes. This CD contains two distinct structural subgroups with either a N- or C-terminal beta-strand forming the peptide-binding groove base. The circular permutation placing the strand on the N-terminus appears to be found in Eumetazoa only, while the C-terminal variant is found in all three kingdoms of life, and seems to co-occur with protease domains. PDZ domains have been named after PSD95(post synaptic density protein), DlgA (Drosophila disc large tumor suppressor), and ZO1, a mammalian tight junction protein. Length = 70

>gnl|CDD|212972 cd12039, SH3_MPP3, Src Homology 3 domain of Membrane Protein, Palmitoylated 3 (or MAGUK p55 subfamily member 3)

 Score = 57.3 bits (138), Expect = 3e-11
 Identities = 23/40 (57%), Positives = 28/40 (70%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +RA FDY+   D  IPC++AGL F + DIL VVSQDD  W
Sbjct: 2   MRALFDYNPYEDRAIPCQEAGLPFKRRDILEVVSQDDPTW 41

MPP3 is a scaffolding protein that colocalizes with MPP5 and CRB1 at the subdpical region adjacent to adherens junctions and may function in photoreceptor polarity. It interacts with some nectins and regulates their trafficking and processing. Nectins are cell-cell adhesion proteins involved in the establishment apical-basal polarity at cell adhesion sites. It is one of seven vertebrate homologs of the Drosophila Stardust protein, which is required in establishing cell polarity, and it contains two L27 domains followed by the core of three domains characteristic of MAGUK (membrane-associated guanylate kinase) proteins: PDZ, SH3, and guanylate kinase (GuK). The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|238488 cd00988, PDZ_CTP_protease, PDZ domain of C-terminal processing-, tail-specific-, and tricorn proteases, which function in posttranslational protein processing, maturation, and disassembly or degradation, in Bacteria, Archaea, and plant chloroplasts

 Score = 54.9 bits (133), Expect = 4e-10
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 147 LGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS 206
           +G  +K   + G +V+  V+ G  A ++G I  GD +  ++G  V+G +  DV+K+L+  
Sbjct: 4   IGLELK--YDDGGLVITSVLPGSPAAKAG-IKAGDIIVAIDGEPVDGLSLEDVVKLLRGK 60

Query: 207 EGT-ITFKLIPADNK 220
            GT +   L   D +
Sbjct: 61  AGTKVRLTLKRGDGE 75

May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins. Length = 85

>gnl|CDD|201332 pfam00595, PDZ, PDZ domain (Also known as DHR or GLGF)

 Score = 54.2 bits (131), Expect = 6e-10
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 143 SNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLK 201
               LG ++    +    I V+ V+ GGAA+  G +  GD +  +NG ++E  +  + + 
Sbjct: 8   GRGGLGFSLVGGSDGDPGIFVSEVLPGGAAEAGG-LQEGDRILSINGQDLENLSHDEAVL 66

Query: 202 ILQSSEGTITFKLI 215
            L+ S G +T  ++
Sbjct: 67  ALKGSGGEVTLTIL 80

PDZ domains are found in diverse signaling proteins. Length = 80

>gnl|CDD|212795 cd11861, SH3_DLG-like, Src Homology 3 domain of Disks large homolog proteins

 Score = 51.6 bits (124), Expect = 4e-09
 Identities = 23/41 (56%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVS-QDDAYW 269
           VRA FDYD S D  +P +  GLSF  GDILHV +  DD +W
Sbjct: 2   VRALFDYDPSRDSGLPSQ--GLSFKFGDILHVTNASDDEWW 40

The DLG-like proteins are scaffolding proteins that cluster at synapses and are also called PSD (postsynaptic density)-95 proteins or SAPs (synapse-associated proteins). They play important roles in synaptic development and plasticity, cell polarity, migration and proliferation. They are members of the MAGUK (membrane-associated guanylate kinase) protein family, which is characterized by the presence of a core of three domains: PDZ, SH3, and guanylate kinase (GuK). The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. DLG-like proteins contain three PDZ domains and varying N-terminal regions. All DLG proteins exist as alternatively-spliced isoforms. Vertebrates contain four DLG proteins from different genes, called DLG1-4. DLG4 and DLG2 are found predominantly at postsynaptic sites and they mediate surface ion channel and receptor clustering. DLG3 is found axons and some presynaptic terminals. DLG1 interacts with AMPA-type glutamate receptors and is critical in their maturation and delivery to synapses. The SH3 domain of DLG4 binds and clusters the kainate subgroup of glutamate receptors via two proline-rich sequences in their C-terminal tail. It also binds AKAP79/150 (A-kinase anchoring protein). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +VRA +DY A            LSF KGDI+ V+ + D  W
Sbjct: 4   QVRALYDYTAQDPD-------ELSFKKGDIITVLEKSDDGW 37

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|197794 smart00569, L27, domain in receptor targeting proteins Lin-2 and Lin-7

 Score = 44.8 bits (107), Expect = 9e-07
 Identities = 26/53 (49%), Positives = 35/53 (66%)

Query: 70  QISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPE 122
           Q  LE+L+ L S L+ ++D +EL  LLQ P+LQ LL  HD VA+ +  P LPE
Sbjct: 1   QRLLELLEELQSLLSPSEDLQELRRLLQSPHLQALLKIHDKVAETELDPPLPE 53

Length = 53

>gnl|CDD|212962 cd12029, SH3_DLG3, Src Homology 3 domain of Disks Large homolog 3

 Score = 45.1 bits (106), Expect = 1e-06
 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVV-SQDDAYW 269
           VRA FDYD + D  +P +  GLSF+ GDILHV+ + DD +W
Sbjct: 5   VRALFDYDRTRDSCLPSQ--GLSFSYGDILHVINASDDEWW 43

DLG3, also called synapse-associated protein 102 (SAP102), is a scaffolding protein that clusters at synapses and plays an important role in synaptic development and plasticity. Mutations in DLG3 cause midgestational embryonic lethality in mice and may be associated with nonsyndromic X-linked mental retardation in humans. It interacts with the NEDD4 (neural precursor cell-expressed developmentally downregulated 4) family of ubiquitin ligases and promotes apical tight junction formation. DLG3 is a member of the MAGUK (membrane-associated guanylate kinase) protein family, which is characterized by the presence of a core of three domains: PDZ, SH3, and guanylate kinase (GuK). The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. DLG3 contains three PDZ domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 67

>gnl|CDD|212965 cd12032, SH3_DLG2, Src Homology 3 domain of Disks Large homolog 2

 Score = 44.7 bits (105), Expect = 2e-06
 Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 3/47 (6%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVV-SQDDAYW 269
           ++  + VRA FDY+ S D  +P +  GLSF  GDILHV+ + DD +W
Sbjct: 2   QKRSLYVRAMFDYEKSKDSGLPSQ--GLSFRYGDILHVINASDDEWW 46

DLG2, also called postsynaptic density-93 (PSD93) or Channel-associated protein of synapse-110 (chapsyn 110), is a scaffolding protein that clusters at synapses and plays an important role in synaptic development and plasticity. The DLG2 delta isoform binds inwardly rectifying potassium Kir2 channels, which determine resting membrane potential in neurons. It regulates the spatial and temporal distribution of Kir2 channels within neuronal membranes. DLG2 is a member of the MAGUK (membrane-associated guanylate kinase) protein family, which is characterized by the presence of a core of three domains: PDZ, SH3, and guanylate kinase (GuK). The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. DLG2 contains three PDZ domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 74

>gnl|CDD|223864 COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 147 LGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS 206
           +G  ++  E+ G + V   + G  A ++G I  GD + +++G +V G +  + +K+++  
Sbjct: 102 IGIELQ-MEDIGGVKVVSPIDGSPAAKAG-IKPGDVIIKIDGKSVGGVSLDEAVKLIRGK 159

Query: 207 EGT-ITFKLIPA 217
            GT +T  ++ A
Sbjct: 160 PGTKVTLTILRA 171

Length = 406

>gnl|CDD|238490 cd00990, PDZ_glycyl_aminopeptidase, PDZ domain associated with archaeal and bacterial M61 glycyl-aminopeptidases

 Score = 43.6 bits (103), Expect = 5e-06
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 151 IKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGI-------NVEGKTPGDVLKIL 203
           +  D+E G   V  V     AD++GL+  GDE+  VNG         ++    GD +++ 
Sbjct: 5   LTLDKEEGLGKVTFVRDDSPADKAGLV-AGDELVAVNGWRVDALQDRLKEYQAGDPVELT 63

Query: 204 QSSEGT-ITFKLIPADN 219
              +   I   L  AD 
Sbjct: 64  VFRDDRLIEVPLTLADP 80

May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand is presumed to form the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins. Length = 80

>gnl|CDD|212964 cd12031, SH3_DLG1, Src Homology 3 domain of Disks Large homolog 1

 Score = 42.8 bits (100), Expect = 7e-06
 Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVV-SQDDAYW 269
           VRA FDYD + D  +P +  GL+F  GDILHVV + DD +W
Sbjct: 5   VRALFDYDKTKDSGLPSQ--GLNFKFGDILHVVNASDDEWW 43

DLG1, also called synapse-associated protein 97 (SAP97), is a scaffolding protein that clusters at synapses and plays an important role in synaptic development and plasticity. DLG1 plays roles in regulating cell polarity, proliferation, migration, and cycle progression. It interacts with AMPA-type glutamate receptors and is critical in their maturation and delivery to synapses. It also interacts with PKCalpha and promotes wound healing. DLG1 is a member of the MAGUK (membrane-associated guanylate kinase) protein family, which is characterized by the presence of a core of three domains: PDZ, SH3, and guanylate kinase (GuK). The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. DLG1 contains three PDZ domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 67

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 42.1 bits (100), Expect = 8e-06
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             RA +DY+A  D         LSF KGDI+ V+ +DD  W
Sbjct: 1   YARALYDYEAQDD-------DELSFKKGDIITVLEKDDDGW 34

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|212816 cd11883, SH3_Sdc25, Src Homology 3 domain of Sdc25/Cdc25 guanine nucleotide exchange factors

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           V A +D+   S          LSF  GDI++V+++D + W
Sbjct: 2   VVALYDFTPKSKNQ-------LSFKAGDIIYVLNKDPSGW 34

This subfamily is composed of the Saccharomyces cerevisiae guanine nucleotide exchange factors (GEFs) Sdc25 and Cdc25, and similar proteins. These GEFs regulate Ras by stimulating the GDP/GTP exchange on Ras. Cdc25 is involved in the Ras/PKA pathway that plays an important role in the regulation of metabolism, stress responses, and proliferation, depending on available nutrients and conditions. Proteins in this subfamily contain an N-terminal SH3 domain as well as REM (Ras exchanger motif) and RasGEF domains at the C-terminus. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 55

>gnl|CDD|212793 cd11859, SH3_ZO, Src homology 3 domain of the Tight junction proteins, Zonula occludens (ZO) proteins

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 7/33 (21%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVV 262
           +R HFDY+  +          LSF KG++ HVV
Sbjct: 2   IRTHFDYEKPAK-------GELSFKKGEVFHVV 27

ZO proteins are scaffolding proteins that associate with each other and with other proteins of the tight junction, zonula adherens, and gap junctions. They play roles in regulating cytoskeletal dynamics at these cell junctions. They are considered members of the MAGUK (membrane-associated guanylate kinase) protein family, which is characterized by the presence of a core of three domains: PDZ, SH3, and guanylate kinase (GuK). The GuK domain in MAGUK proteins is enzymatically inactive; instead, the domain mediates protein-protein interactions and associates intramolecularly with the SH3 domain. Vertebrates contain three ZO proteins (ZO-1, ZO-2, and ZO-3) with redundant and non-redundant roles. They contain three PDZ domains, followed by SH3 and GuK domains; in addition, ZO-1 and ZO-2 contains a proline-rich (PR) actin binding domain at the C-terminus while ZO-3 contains this PR domain between the second and third PDZ domains. The C-terminal regions of the three ZO proteins are unique. The SH3 domain of ZO-1 has been shown to bind ZONAB, ZAK, afadin, and Galpha12. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|212771 cd11837, SH3_Intersectin_2, Second Src homology 3 domain (or SH3B) of Intersectin

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A +       P+   K+  LSF KGDI+ V+ Q + +W
Sbjct: 1   TATALY-------PWRAKKENHLSFAKGDIITVLEQQEMWW 34

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The second SH3 domain (or SH3B) of ITSN1 has been shown to bind WNK and CdGAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|219499 pfam07653, SH3_2, Variant SH3 domain

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 8/42 (19%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD-DAYW 269
             R  FDY A+           LS  KGD++ V+ +D + +W
Sbjct: 1   YGRVIFDYVATDPN-------ELSLKKGDVVKVLDKDDNGWW 35

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 53

>gnl|CDD|238489 cd00989, PDZ_metalloprotease, PDZ domain of bacterial and plant zinc metalloprotases, presumably membrane-associated or integral membrane proteases, which may be involved in signalling and regulatory mechanisms

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 4/62 (6%)

Query: 161 VVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG-TITFKLIPADN 219
           V+  V+ G  A ++G +  GD +  +NG  +  K+  D++  +Q + G  +T  +     
Sbjct: 15  VIGEVVPGSPAAKAG-LKAGDRILAINGQKI--KSWEDLVDAVQENPGKPLTLTVERNGE 71

Query: 220 KL 221
            +
Sbjct: 72  TI 73

May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins. Length = 79

>gnl|CDD|238487 cd00987, PDZ_serine_protease, PDZ domain of tryspin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 138 VQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPG 197
           V +      L   +   +  G ++VA V  G  A ++GL   GD +  VNG  V  K+  
Sbjct: 5   VTVQDLTPDLAEELGLKDTKG-VLVASVDPGSPAAKAGL-KPGDVILAVNGKPV--KSVA 60

Query: 198 DVLKILQSSE--GTITFKLI 215
           D+ + L   +    +T  ++
Sbjct: 61  DLRRALAELKPGDKVTLTVL 80

May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins. Length = 90

>gnl|CDD|221961 pfam13180, PDZ_2, PDZ domain

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 12/66 (18%)

Query: 147 LGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGI----------NVEGKTP 196
           +G  +  +E +G + V  V  G  A ++GL   GD +  ++G            +    P
Sbjct: 3   IGVRVVQNEGTG-VTVVSVKEGSPAAKAGL-KPGDIILSIDGKKVNSLTELIEVILNGKP 60

Query: 197 GDVLKI 202
           GD +K+
Sbjct: 61  GDTVKL 66

Length = 81

>gnl|CDD|197794 smart00569, L27, domain in receptor targeting proteins Lin-2 and Lin-7

 Score = 35.6 bits (83), Expect = 0.001
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 16 LLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSI 56
          LLE L+E QS  S + E+L  L  LLQS  L AL+ +H+ +
Sbjct: 3  LLELLEELQSLLSPS-EDLQELRRLLQSPHLQALLKIHDKV 42

Length = 53

>gnl|CDD|212882 cd11949, SH3_GRB2_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2

 Score = 36.0 bits (83), Expect = 0.001
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           V+A FD+D       P +D  L F +GD + V+   D  W
Sbjct: 2   VQALFDFD-------PQEDGELGFRRGDFIEVMDNSDPNW 34

GRB2 is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. It is ubiquitously expressed in all tissues throughout development and is important in cell cycle progression, motility, morphogenesis, and angiogenesis. In lymphocytes, GRB2 is associated with antigen receptor signaling components. GRB2 contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domain of GRB2 binds to Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, as well as to the proline-rich C-terminus of FGRF2. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 35.6 bits (83), Expect = 0.001
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 7/39 (17%)

Query: 231 RAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            A +DY A         +  LSF KGDI+ V+ + D  W
Sbjct: 1   VALYDYTAREP-----DE--LSFKKGDIIIVLEKSDDGW 32

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|212994 cd12061, SH3_betaPIX, Src Homology 3 domain of beta-Pak Interactive eXchange factor

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           VRA F++  +++         LSF+KGD++HV   ++  W
Sbjct: 2   VRAKFNFQQTNEDE-------LSFSKGDVIHVTRVEEGGW 34

Beta-PIX, also called Rho guanine nucleotide exchange factor 7 (ARHGEF7) or Cool (Cloned out of Library)-1, activates small GTPases by exchanging bound GDP for free GTP. It acts as a GEF for both Cdc42 and Rac 1, and plays important roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|232883 TIGR00225, prc, C-terminal peptidase (prc)

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 138 VQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPG 197
                S E +G  +    + G+IV+     G  A+++G I  GD++ ++NG +V G +  
Sbjct: 44  ETTSGSLEGIGIQVG--MDDGEIVIVSPFEGSPAEKAG-IKPGDKIIKINGKSVAGMSLD 100

Query: 198 DVLKILQSSEGT 209
           D + +++  +GT
Sbjct: 101 DAVALIRGKKGT 112

A C-terminal peptidase with different substrates in different species including processing of D1 protein of the photosystem II reaction center in higher plants and cleavage of a peptide of 11 residues from the precursor form of penicillin-binding protein in E.coli E.coli and H influenza have the most distal branch of the tree and their proteins have an N-terminal 200 amino acids that show no homology to other proteins in the database [Protein fate, Degradation of proteins, peptides, and glycopeptides, Protein fate, Protein modification and repair]. Length = 334

>gnl|CDD|212706 cd11772, SH3_OSTF1, Src Homology 3 domain of metazoan osteoclast stimulating factor 1

 Score = 34.6 bits (80), Expect = 0.004
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            RA +DY+A         D  LSF +GD+L++  + D  W
Sbjct: 2   FRALYDYEAQHP------DE-LSFEEGDLLYISDKSDPNW 34

OSTF1, also named OSF or SH3P2, is a signaling protein containing SH3 and ankyrin-repeat domains. It acts through a Src-related pathway to enhance the formation of osteoclasts and bone resorption. It also acts as a negative regulator of cell motility. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	269
KOG0609|consensus	542		100.0
KOG3550|consensus	207		99.73
PF00595	81	PDZ: PDZ domain (Also known as DHR or GLGF) Coordi	99.61
KOG3580|consensus	1027		99.56
KOG3549|consensus	505		99.3
KOG3209|consensus	984		99.28
KOG3209|consensus	984		99.27
KOG3606|consensus	358		99.27
KOG3551|consensus	506		99.25
cd00992	82	PDZ_signaling PDZ domain found in a variety of Eum	99.21
smart00228	85	PDZ Domain present in PSD-95, Dlg, and ZO-1/2. Als	99.19
cd00136	70	PDZ PDZ domain, also called DHR (Dlg homologous re	99.12
KOG1892|consensus	1629		98.96
PF13180	82	PDZ_2: PDZ domain; PDB: 2L97_A 1Y8T_A 2Z9I_A 1LCY_	98.96
KOG3605|consensus	829		98.86
PF02828	56	L27: L27 domain; InterPro: IPR014775 The L27 domai	98.86
cd00988	85	PDZ_CTP_protease PDZ domain of C-terminal processi	98.82
KOG3580|consensus	1027		98.77
KOG3553|consensus	124		98.71
KOG3571|consensus	626		98.63
KOG3552|consensus	1298		98.53
KOG3651|consensus	429		98.49
cd00990	80	PDZ_glycyl_aminopeptidase PDZ domain associated wi	98.48
cd00989	79	PDZ_metalloprotease PDZ domain of bacterial and pl	98.46
cd00991	79	PDZ_archaeal_metalloprotease PDZ domain of archaea	98.46
COG0793	406	Prc Periplasmic protease [Cell envelope biogenesis	98.39
TIGR00225	334	prc C-terminal peptidase (prc). A C-terminal pepti	98.33
PLN00049	389	carboxyl-terminal processing protease; Provisional	98.32
PF02828	56	L27: L27 domain; InterPro: IPR014775 The L27 domai	98.29
KOG3938|consensus	334		98.26
cd00987	90	PDZ_serine_protease PDZ domain of tryspin-like ser	98.24
PRK11186	667	carboxy-terminal protease; Provisional	98.23
KOG3542|consensus	1283		98.22
smart00569	55	L27 domain in receptor targeting proteins Lin-2 an	98.21
cd00986	79	PDZ_LON_protease PDZ domain of ATP-dependent LON s	98.15
KOG3605|consensus	829		98.13
smart00569	55	L27 domain in receptor targeting proteins Lin-2 an	97.87
PRK10779	449	zinc metallopeptidase RseP; Provisional	97.85
TIGR02037	428	degP_htrA_DO periplasmic serine protease, Do/DeqQ	97.84
TIGR01713	259	typeII_sec_gspC general secretion pathway protein	97.82
PRK10942	473	serine endoprotease; Provisional	97.71
PRK10139	455	serine endoprotease; Provisional	97.67
PRK10139	455	serine endoprotease; Provisional	97.64
TIGR02037	428	degP_htrA_DO periplasmic serine protease, Do/DeqQ	97.63
TIGR02038	351	protease_degS periplasmic serine pepetdase DegS. T	97.61
TIGR00054	420	RIP metalloprotease RseP. A model that detects fra	97.59
PRK10779	449	zinc metallopeptidase RseP; Provisional	97.58
PRK10898	353	serine endoprotease; Provisional	97.56
PRK10942	473	serine endoprotease; Provisional	97.56
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	97.55
TIGR00054	420	RIP metalloprotease RseP. A model that detects fra	97.54
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	97.45
KOG0708|consensus	359		97.4
PF09060	49	L27_N: L27_N; InterPro: IPR015145 The L27_N domain	97.35
PF14685	88	Tricorn_PDZ: Tricorn protease PDZ domain; PDB: 1N6	97.31
TIGR03279	433	cyano_FeS_chp putative FeS-containing Cyanobacteri	97.24
KOG0606|consensus	1205		97.22
KOG2199|consensus	462		97.21
TIGR02860	402	spore_IV_B stage IV sporulation protein B. SpoIVB,	97.16
KOG1118|consensus	366		97.07
PF04495	138	GRASP55_65: GRASP55/65 PDZ-like domain ; InterPro:	96.98
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	96.92
KOG1738|consensus	638		96.88
COG3975	558	Predicted protease with the C-terminal PDZ domain	96.76
KOG4792|consensus	293		96.67
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	96.65
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	96.49
PF09045	58	L27_2: L27_2; InterPro: IPR015132 The L27_2 domain	96.22
KOG3129|consensus	231		96.17
COG0265	347	DegQ Trypsin-like serine proteases, typically peri	96.15
KOG1029|consensus	1118		95.65
PRK09681	276	putative type II secretion protein GspC; Provision	95.48
COG3031	275	PulC Type II secretory pathway, component PulC [In	95.34
KOG4225|consensus	489		95.31
KOG3532|consensus	1051		95.25
KOG3601|consensus	222		95.11
COG3480	342	SdrC Predicted secreted protein containing a PDZ d	94.34
KOG4225|consensus	489		94.26
KOG1320|consensus	473		94.18
KOG4407|consensus	1973		92.18
KOG1421|consensus	955		91.44
KOG4371|consensus	1332		91.16
PF12812	78	PDZ_1: PDZ-like domain	91.09
KOG4371|consensus	1332		90.31
KOG4226|consensus	379		89.92
KOG2856|consensus	472		88.68
KOG3632|consensus	1335		86.11
KOG0162|consensus	1106		85.45
KOG4407|consensus	1973		84.8
KOG3834|consensus	462		83.4

>KOG0609|consensus

Probab=100.00  E-value=5.7e-48  Score=361.85  Aligned_cols=248  Identities=46%  Similarity=0.724  Sum_probs=212.0

Q ss_pred             HHHHHHhhcccccChhhHHHHHHHhcChhHHHHHhhhhccccccC---CCccCchHHhHHHHHHHHhhccCCChhHHHHH
Q psy14174         17 LETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNEQS---HPVLSNAMQISLEVLDVLLSRLALNDDCKELF   93 (269)
Q Consensus        17 L~~L~~~~~~~~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~~~~---~p~~~~~~~~~~~v~~~l~~~~~~~~~~~el~   93 (269)
                      |+++..+...+.....+++||+++|++|.+++|+++|++|+..+.   .|..+++..+..++++.+..... +.+++||.
T Consensus         3 l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~l~k~~~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~eL~   81 (542)
T KOG0609|consen    3 LDNLVELFSSTGYERGDLIFLRSILESPIVQSLAKIYDKLEELKLESVVPAISNAELLAEEVLEELQLAPV-SSEVQELR   81 (542)
T ss_pred             cccccccccchhhhhhhHHHHHHhhhhhHHHHHHHHHHHHHhccccCCCCccchHHHHHHHHHHhhhccCC-ChhHHHHH
Confidence            445555545554555669999999999999999999999998743   44456777777777777777766 99999999


Q ss_pred             HhccCchhhhhhhhcccccccccCCCCCCCCCCC--CCCCCCceEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCCh
Q psy14174         94 VLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQEL--VDDEEETVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGA  170 (269)
Q Consensus        94 ~ll~~p~~~~ll~a~d~v~~~~~~~~~p~~p~~~--~~~~~~~~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~  170 (269)
                      .||+.||+++++++||.++++ |+. +|..|...  .++..+.+|+|++.| .++++|+|++..+.. .++|+||++||.
T Consensus        82 ~iL~~ph~~~~l~ahd~vas~-~~~-~~~~p~l~~~~~e~~~~vriv~i~k~~~eplG~Tik~~e~~-~~~vARI~~GG~  158 (542)
T KOG0609|consen   82 QLLNTPHLQALLQAHDTVASK-YDQ-PPFSPYLNPESPEPVEAVRIVRIVKNTGEPLGATIRVEEDT-KVVVARIMHGGM  158 (542)
T ss_pred             HHhcchhHhHHHHHhHHHhhc-cCC-CCCccccCCCcccccceeEEEEEeecCCCccceEEEeccCC-ccEEeeeccCCc
Confidence            999999999999999999988 663 34444320  234567899999999 599999999997654 899999999999


Q ss_pred             hhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCCCcCcccccceeeeeecccCCCCCCCCCCCCCc
Q psy14174        171 ADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAG  250 (269)
Q Consensus       171 A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~~~~~~~~~~~~vRa~fdy~p~~D~~ipc~e~g  250 (269)
                      |+|+|+|++||+|++|||+++.+....+++.+++.+.|+++|++.|+.. .......+||||+|||||..|++|||+|+|
T Consensus       159 ~~r~glL~~GD~i~EvNGi~v~~~~~~e~q~~l~~~~G~itfkiiP~~~-~~~~~~~~~vra~FdYdP~~D~~IPCkEag  237 (542)
T KOG0609|consen  159 ADRQGLLHVGDEILEVNGISVANKSPEELQELLRNSRGSITFKIIPSYR-PPPQQQVVFVRALFDYDPKEDDLIPCKEAG  237 (542)
T ss_pred             chhccceeeccchheecCeecccCCHHHHHHHHHhCCCcEEEEEccccc-CCCceeeeeehhhcCcCcccCCcccchhcC
Confidence            9999999999999999999999999999999999999999999999754 333333599999999999999999999999


Q ss_pred             cccCCCCEEEEEeCCCCCC
Q psy14174        251 LSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       251 L~F~~GDIL~vv~~~d~~W  269 (269)
                      |+|++||||||+|++|+||
T Consensus       238 l~F~~GDILqIv~qdD~nW  256 (542)
T KOG0609|consen  238 LPFQRGDILQIVSQDDPNW  256 (542)
T ss_pred             CcccccceeeeccCCCcch
Confidence            9999999999999999999

>KOG3550|consensus

Probab=99.73  E-value=3.6e-17  Score=131.67  Aligned_cols=165  Identities=24%  Similarity=0.392  Sum_probs=124.7

Q ss_pred             CCcchhHHHHHHHHHHhhcccccChhhHHHHHHHhcChhHHHHHhhhhccccccCCCccCchHHhHHHHHHHHhhccCCC
Q psy14174          7 EEFDISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNEQSHPVLSNAMQISLEVLDVLLSRLALN   86 (269)
Q Consensus         7 ~~~~~~~~~vL~~L~~~~~~~~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~v~~~l~~~~~~~   86 (269)
                      +..+-.+++.+.-|+.++..-.-....+.-|+.+|+|.-+.++-.+|+                       .+.      
T Consensus         8 ~~lerdv~r~ielleklq~sgevp~~kl~alq~vlqsef~~avrevye-----------------------~vy------   58 (207)
T KOG3550|consen    8 LTLERDVQRAIELLEKLQRSGEVPPQKLQALQKVLQSEFCTAVREVYE-----------------------HVY------   58 (207)
T ss_pred             ccchHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHH------
Confidence            334446777777777777665555667777777777765544433333                       222      


Q ss_pred             hhHHHHHHhccCchhhhhhhhcccccccccCCCCCCCCCCCCCCCCCceEEEEEeeCCCCCCeEEeccC-CCCcEEEEEe
Q psy14174         87 DDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDE-ESGKIVVARV  165 (269)
Q Consensus        87 ~~~~el~~ll~~p~~~~ll~a~d~v~~~~~~~~~p~~p~~~~~~~~~~~r~V~l~k~~~~lG~ti~~~~-~~~~i~V~~V  165 (269)
                          |...+-.+|.+++-..|..+|+.  |.          ..+....+|+|+|-|..+||||.+.||+ .+.+|||+||
T Consensus        59 ----etidi~~s~eira~atakatvaa--fa----------aseghahprvvelpktdeglgfnvmggkeqnspiyisri  122 (207)
T KOG3550|consen   59 ----ETIDIDGSPEIRAAATAKATVAA--FA----------ASEGHAHPRVVELPKTDEGLGFNVMGGKEQNSPIYISRI  122 (207)
T ss_pred             ----hhcccCCChHHhhhhhhHHHHHH--HH----------HhccCCCCceeecCccccccceeeccCcccCCceEEEee
Confidence                22345556777776666666653  21          1233455799999999999999999985 4579999999


Q ss_pred             cCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEe
Q psy14174        166 MHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIP  216 (269)
Q Consensus       166 ~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p  216 (269)
                      +|||.|+|-|.|+.||++++|||++|.+-.|+.++++|+.+.++|.|.|.-
T Consensus       123 ipggvadrhgglkrgdqllsvngvsvege~hekavellkaa~gsvklvvry  173 (207)
T KOG3550|consen  123 IPGGVADRHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAVGSVKLVVRY  173 (207)
T ss_pred             cCCccccccCcccccceeEeecceeecchhhHHHHHHHHHhcCcEEEEEec
Confidence            999999999999999999999999999999999999999999999998864

>PF00595 PDZ: PDZ domain (Also known as DHR or GLGF) Coordinates are not yet available; InterPro: IPR001478 PDZ domains are found in diverse signalling proteins in bacteria, yeasts, plants, insects and vertebrates [, ]

Probab=99.61  E-value=7.4e-15  Score=108.11  Aligned_cols=78  Identities=33%  Similarity=0.624  Sum_probs=72.3

Q ss_pred             EEEEee-CCCCCCeEEeccCCC--CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        137 IVQLVK-SNEPLGATIKTDEES--GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       137 ~V~l~k-~~~~lG~ti~~~~~~--~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      .|.+.| .+++|||++.++...  .+++|+.|.++|+|+++| |++||+|++|||+++.++++.+++.+++.+++.++|+
T Consensus         1 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~V~~v~~~~~a~~~g-l~~GD~Il~INg~~v~~~~~~~~~~~l~~~~~~v~L~   79 (81)
T PF00595_consen    1 QVTLEKSGNGPLGFTLRGGSDNDEKGVFVSSVVPGSPAERAG-LKVGDRILEINGQSVRGMSHDEVVQLLKSASNPVTLT   79 (81)
T ss_dssp             EEEEEESTTSBSSEEEEEESTSSSEEEEEEEECTTSHHHHHT-SSTTEEEEEETTEESTTSBHHHHHHHHHHSTSEEEEE
T ss_pred             CEEEEeCCCCCcCEEEEecCCCCcCCEEEEEEeCCChHHhcc-cchhhhhheeCCEeCCCCCHHHHHHHHHCCCCcEEEE
Confidence            367888 889999999998765  499999999999999999 8999999999999999999999999999999999998


Q ss_pred             EE
Q psy14174        214 LI  215 (269)
Q Consensus       214 v~  215 (269)
                      |.
T Consensus        80 V~   81 (81)
T PF00595_consen   80 VQ   81 (81)
T ss_dssp             EE
T ss_pred             EC
Confidence            74

PDZ domains can occur in one or multiple copies and are nearly always found in cytoplasmic proteins. They bind either the carboxyl-terminal sequences of proteins or internal peptide sequences []. In most cases, interaction between a PDZ domain and its target is constitutive, with a binding affinity of 1 to 10 microns. However, agonist-dependent activation of cell surface receptors is sometimes required to promote interaction with a PDZ protein. PDZ domain proteins are frequently associated with the plasma membrane, a compartment where high concentrations of phosphatidylinositol 4,5-bisphosphate (PIP2) are found. Direct interaction between PIP2 and a subset of class II PDZ domains (syntenin, CASK, Tiam-1) has been demonstrated. PDZ domains consist of 80 to 90 amino acids comprising six beta-strands (beta-A to beta-F) and two alpha-helices, A and B, compactly arranged in a globular structure. Peptide binding of the ligand takes place in an elongated surface groove as an anti-parallel beta-strand interacts with the beta-B strand and the B helix. The structure of PDZ domains allows binding to a free carboxylate group at the end of a peptide through a carboxylate-binding loop between the beta-A and beta-B strands.; GO: 0005515 protein binding; PDB: 3AXA_A 1WF8_A 1QAV_B 1QAU_A 1B8Q_A 1MC7_A 2KAW_A 1I16_A 1VB7_A 1WI4_A ....

>KOG3580|consensus

Probab=99.56  E-value=9.6e-15  Score=139.17  Aligned_cols=122  Identities=21%  Similarity=0.401  Sum_probs=98.8

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC--CeE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE--GTI  210 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~--~~v  210 (269)
                      ...|+|++.| |..+|+.+.||++ -||||+.|..|+||++.| |+.||+|+.||.+++.++..++++..|-...  ..+
T Consensus       406 P~tk~VrF~K-GdSvGLRLAGGND-VGIFVaGvqegspA~~eG-lqEGDQIL~VN~vdF~nl~REeAVlfLL~lPkGEev  482 (1027)
T KOG3580|consen  406 PNTKMVRFKK-GDSVGLRLAGGND-VGIFVAGVQEGSPAEQEG-LQEGDQILKVNTVDFRNLVREEAVLFLLELPKGEEV  482 (1027)
T ss_pred             CCceeEEeec-CCeeeeEeccCCc-eeEEEeecccCCchhhcc-ccccceeEEeccccchhhhHHHHHHHHhcCCCCcEE
Confidence            4567777665 6689999999964 499999999999999999 6999999999999999999999999987754  444


Q ss_pred             EEEEEeCC-----CcCcccccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC
Q psy14174        211 TFKLIPAD-----NKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ  264 (269)
Q Consensus       211 ~l~v~p~~-----~~~~~~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~  264 (269)
                      ++.-....     -...-...+||+|.||+|.++.       ..||+|.+||+++|+|+
T Consensus       483 tilaQ~k~Dvyr~iv~s~vGDSFyIRtHFE~Eke~-------P~gL~FtrGeVFrvvDT  534 (1027)
T KOG3580|consen  483 TILAQSKADVYRDIVASGVGDSFYIRTHFECEKET-------PQGLAFTRGEVFRVVDT  534 (1027)
T ss_pred             eehhhhhhHHHHHHHhccCCceeEEeeeeeecCCC-------Cccccccccceeeeeec
Confidence            44332211     1112356789999999999987       66999999999999984

>KOG3549|consensus

Probab=99.30  E-value=7.7e-12  Score=113.10  Aligned_cols=84  Identities=26%  Similarity=0.429  Sum_probs=77.5

Q ss_pred             CceEEEEEee-CCCCCCeEEeccC-CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDE-ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~-~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ..-|+|.|.| .-+|||++|+||. ++-+++|++|...-.|+..|.|.+||-|++|||+.|+.++|++++.+||++|+.|
T Consensus        53 s~eRtVtirRQ~vGGlGLSIKGGaEHn~PvviSkI~kdQaAd~tG~LFvGDAilqvNGi~v~~c~HeevV~iLRNAGdeV  132 (505)
T KOG3549|consen   53 SKERTVTIRRQKVGGLGLSIKGGAEHNLPVVISKIYKDQAADITGQLFVGDAILQVNGIYVTACPHEEVVNILRNAGDEV  132 (505)
T ss_pred             CCceeEEEEeeecCcceeeeccccccCccEEeehhhhhhhhhhcCceEeeeeeEEeccEEeecCChHHHHHHHHhcCCEE
Confidence            4468899999 7889999999984 4559999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEe
Q psy14174        211 TFKLIP  216 (269)
Q Consensus       211 ~l~v~p  216 (269)
                      +++|..
T Consensus       133 tlTV~~  138 (505)
T KOG3549|consen  133 TLTVKH  138 (505)
T ss_pred             EEEeHh
Confidence            999854

>KOG3209|consensus

Probab=99.28  E-value=1.2e-11  Score=120.01  Aligned_cols=85  Identities=22%  Similarity=0.400  Sum_probs=75.7

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccC-CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDE-ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~-~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ...+..|+|+|+..||||+|+||+ .+-++||-|+..+|||.+.|++++||+|++|||.+..+|+|..++++|++-+..+
T Consensus       896 n~~~~~VelErG~kGFGFSiRGGreynM~LfVLRlAeDGPA~rdGrm~VGDqi~eINGesTkgmtH~rAIelIk~gg~~v  975 (984)
T KOG3209|consen  896 NGDLYTVELERGAKGFGFSIRGGREYNMDLFVLRLAEDGPAIRDGRMRVGDQITEINGESTKGMTHDRAIELIKQGGRRV  975 (984)
T ss_pred             cCCeeEEEeeccccccceEeecccccccceEEEEeccCCCccccCceeecceEEEecCcccCCCcHHHHHHHHHhCCeEE
Confidence            345778999999999999999995 3459999999999999999999999999999999999999999999998777666


Q ss_pred             EEEEEe
Q psy14174        211 TFKLIP  216 (269)
Q Consensus       211 ~l~v~p  216 (269)
                      .+.+.+
T Consensus       976 ll~Lr~  981 (984)
T KOG3209|consen  976 LLLLRR  981 (984)
T ss_pred             EEEecc
Confidence            666654

>KOG3209|consensus

Probab=99.27  E-value=8.3e-12  Score=121.22  Aligned_cols=84  Identities=26%  Similarity=0.490  Sum_probs=75.1

Q ss_pred             eEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      ...|.|+| .++||||.|.......+--|.+|++||||+|+|+|++||+|++|||+++.+++|.+++++|+.+|-+|+|+
T Consensus       754 ~yDV~lhR~ENeGFGFVi~sS~~kp~sgiGrIieGSPAdRCgkLkVGDrilAVNG~sI~~lsHadiv~LIKdaGlsVtLt  833 (984)
T KOG3209|consen  754 PYDVVLHRKENEGFGFVIMSSQNKPESGIGRIIEGSPADRCGKLKVGDRILAVNGQSILNLSHADIVSLIKDAGLSVTLT  833 (984)
T ss_pred             CeeeEEecccCCceeEEEEecccCCCCCccccccCChhHhhccccccceEEEecCeeeeccCchhHHHHHHhcCceEEEE
Confidence            45578888 89999999987654434449999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCC
Q psy14174        214 LIPAD  218 (269)
Q Consensus       214 v~p~~  218 (269)
                      |.|.+
T Consensus       834 Iip~e  838 (984)
T KOG3209|consen  834 IIPPE  838 (984)
T ss_pred             EcChh
Confidence            99864

>KOG3606|consensus

Probab=99.27  E-value=8.3e-12  Score=109.48  Aligned_cols=87  Identities=38%  Similarity=0.600  Sum_probs=78.2

Q ss_pred             CCceEEEEEee--CCCCCCeEEeccC----------CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHH
Q psy14174        132 EETVKIVQLVK--SNEPLGATIKTDE----------ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDV  199 (269)
Q Consensus       132 ~~~~r~V~l~k--~~~~lG~ti~~~~----------~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~  199 (269)
                      +|+-|.|+|+|  ...+|||.|+.|.          .-.||||+|+.+||.|+..|+|.+.|+++||||+.|.|++.+|+
T Consensus       156 PEtHRRVRL~khG~ekPLGFYIRDG~SVRVtp~GlekvpGIFISRlVpGGLAeSTGLLaVnDEVlEVNGIEVaGKTLDQV  235 (358)
T KOG3606|consen  156 PETHRRVRLHKHGSEKPLGFYIRDGTSVRVTPHGLEKVPGIFISRLVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQV  235 (358)
T ss_pred             chhhhheehhhcCCCCCceEEEecCceEEeccccccccCceEEEeecCCccccccceeeecceeEEEcCEEeccccHHHH
Confidence            46667789999  5569999999872          23499999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCeEEEEEEeCC
Q psy14174        200 LKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       200 ~~~l~~~~~~v~l~v~p~~  218 (269)
                      ..|+-.....+.++|.|.+
T Consensus       236 TDMMvANshNLIiTVkPAN  254 (358)
T KOG3606|consen  236 TDMMVANSHNLIITVKPAN  254 (358)
T ss_pred             HHHHhhcccceEEEecccc
Confidence            9999888899999999976

>KOG3551|consensus

Probab=99.25  E-value=1e-11  Score=113.50  Aligned_cols=83  Identities=27%  Similarity=0.478  Sum_probs=76.3

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      +.-|.|++.| ..+|||++|+||..+ -+|.|++|.+|-+|++++.|.+||.|++|||.++...+|+|+++.|+++|..|
T Consensus        83 ~~~R~V~V~K~d~gGLGISIKGGreNkMPIlISKIFkGlAADQt~aL~~gDaIlSVNG~dL~~AtHdeAVqaLKraGkeV  162 (506)
T KOG3551|consen   83 EAERRVRVVKQDAGGLGISIKGGRENKMPILISKIFKGLAADQTGALFLGDAILSVNGEDLRDATHDEAVQALKRAGKEV  162 (506)
T ss_pred             cccceeEEEEecCCcceEEeecCcccCCceehhHhccccccccccceeeccEEEEecchhhhhcchHHHHHHHHhhCcee
Confidence            3458899999 889999999999655 49999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEE
Q psy14174        211 TFKLI  215 (269)
Q Consensus       211 ~l~v~  215 (269)
                      .+.|.
T Consensus       163 ~levK  167 (506)
T KOG3551|consen  163 LLEVK  167 (506)
T ss_pred             eeeee
Confidence            88764

>cd00992 PDZ_signaling PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements

Probab=99.21  E-value=2.5e-10  Score=83.42  Aligned_cols=78  Identities=37%  Similarity=0.670  Sum_probs=67.9

Q ss_pred             EEEEEee-CCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        136 KIVQLVK-SNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       136 r~V~l~k-~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      +.+.+.+ ...+|||++.++.. ..+++|..|.++++|+++| |++||+|++|||.++..+++.++...++...+.++++
T Consensus         2 ~~~~l~~~~~~~~G~~~~~~~~~~~~~~V~~v~~~s~a~~~g-l~~GD~I~~ing~~i~~~~~~~~~~~l~~~~~~v~l~   80 (82)
T cd00992           2 RTVTLRKDPGGGLGFSLRGGKDSGGGIFVSRVEPGGPAERGG-LRVGDRILEVNGVSVEGLTHEEAVELLKNSGDEVTLT   80 (82)
T ss_pred             EEEEEEeCCCCCcCEEEeCcccCCCCeEEEEECCCChHHhCC-CCCCCEEEEECCEEcCccCHHHHHHHHHhCCCeEEEE
Confidence            5577888 48899999987632 2589999999999999988 6999999999999999999999999999877777776


Q ss_pred             E
Q psy14174        214 L  214 (269)
Q Consensus       214 v  214 (269)
                      +
T Consensus        81 v   81 (82)
T cd00992          81 V   81 (82)
T ss_pred             E
Confidence            5

May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of PDZ domains an N-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in proteases.

>smart00228 PDZ Domain present in PSD-95, Dlg, and ZO-1/2

Probab=99.19  E-value=4.8e-10  Score=82.07  Aligned_cols=81  Identities=32%  Similarity=0.596  Sum_probs=70.5

Q ss_pred             EEEEEeeCCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        136 KIVQLVKSNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       136 r~V~l~k~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      +.+.+.|....|||++..+... .+++|..|.++|+|+++| |++||+|++|||..+.++++.+...+++..+..+.+++
T Consensus         3 ~~~~~~~~~~~~G~~~~~~~~~~~~~~i~~v~~~s~a~~~g-l~~GD~I~~In~~~v~~~~~~~~~~~~~~~~~~~~l~i   81 (85)
T smart00228        3 RLVELEKGGGGLGFSLVGGKDEGGGVVVSSVVPGSPAAKAG-LKVGDVILEVNGTSVEGLTHLEAVDLLKKAGGKVTLTV   81 (85)
T ss_pred             EEEEEEECCCcccEEEECCCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence            4577888658999999876432 589999999999999999 79999999999999999999999999988877888888


Q ss_pred             EeC
Q psy14174        215 IPA  217 (269)
Q Consensus       215 ~p~  217 (269)
                      .+.
T Consensus        82 ~r~   84 (85)
T smart00228       82 LRG   84 (85)
T ss_pred             EeC
Confidence            763

Also called DHR (Dlg homologous region) or GLGF (relatively well conserved tetrapeptide in these domains). Some PDZs have been shown to bind C-terminal polypeptides; others appear to bind internal (non-C-terminal) polypeptides. Different PDZs possess different binding specificities.

>cd00136 PDZ PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif)

Probab=99.12  E-value=6.4e-10  Score=79.00  Aligned_cols=67  Identities=34%  Similarity=0.562  Sum_probs=59.8

Q ss_pred             CCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC-CeEEEEE
Q psy14174        146 PLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE-GTITFKL  214 (269)
Q Consensus       146 ~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~-~~v~l~v  214 (269)
                      ++||++..... .+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++... ..++|++
T Consensus         2 ~~G~~~~~~~~-~~~~V~~v~~~s~a~~~g-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v   69 (70)
T cd00136           2 GLGFSIRGGTE-GGVVVLSVEPGSPAERAG-LQAGDVILAVNGTDVKNLTLEDVAELLKKEVGEKVTLTV   69 (70)
T ss_pred             CccEEEecCCC-CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhhCCCCeEEEEE
Confidence            68999998743 489999999999999999 6999999999999999999999999998865 6778776

Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. Heterodimerization through PDZ-PDZ domain interactions adds to the domain's versatility, and PDZ domain-mediated interactions may be modulated dynamically through target phosphorylation. Some PDZ domains play a role in scaffolding supramolecular complexes. PDZ domains are found in diverse signaling proteins in bacteria, archebacteria, and eurkayotes. This CD contains two distinct structural subgroups with either a N- or C-terminal beta-strand forming the peptide-binding groove base. The circular permutation placing the strand on the N-terminus appears to be found in Eumetazoa only, while the C-terminal variant is found in all three kingdoms of life, and seems to co-occur with protease domains. PDZ domains have been named after PSD95(pos

>KOG1892|consensus

Probab=98.96  E-value=2.7e-09  Score=106.63  Aligned_cols=85  Identities=22%  Similarity=0.403  Sum_probs=76.0

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCC----CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEES----GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~----~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ..+..|.|.|. .|+|++|...++.    -||||..|.+||+|+..|+|..||+++.|||.++.|.+.+.+..++.+.+.
T Consensus       932 pei~~vtL~Kn-nGmGLSIVAAkGaGq~klGIYvKsVV~GgaAd~DGRL~aGDQLLsVdG~SLiGisQErAA~lmtrtg~ 1010 (1629)
T KOG1892|consen  932 PEIITVTLKKN-NGMGLSIVAAKGAGQRKLGIYVKSVVEGGAADHDGRLEAGDQLLSVDGHSLIGISQERAARLMTRTGN 1010 (1629)
T ss_pred             CceEEEEEecc-CCceEEEEeeccCCccccceEEEEeccCCccccccccccCceeeeecCcccccccHHHHHHHHhccCC
Confidence            44777899987 8999999765433    299999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .|+|.|...+
T Consensus      1011 vV~leVaKqg 1020 (1629)
T KOG1892|consen 1011 VVHLEVAKQG 1020 (1629)
T ss_pred             eEEEehhhhh
Confidence            9999997653

>PF13180 PDZ_2: PDZ domain; PDB: 2L97_A 1Y8T_A 2Z9I_A 1LCY_A 2PZD_B 2P3W_A 1VCW_C 1TE0_B 1SOZ_C 1SOT_C

Probab=98.96  E-value=8.2e-09  Score=76.06  Aligned_cols=70  Identities=29%  Similarity=0.553  Sum_probs=58.1

Q ss_pred             CCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHH--cCCCeEEEEEEeCC
Q psy14174        146 PLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQ--SSEGTITFKLIPAD  218 (269)
Q Consensus       146 ~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~--~~~~~v~l~v~p~~  218 (269)
                      .||+++.......+++|..|.++|||+++| |++||+|++|||.++  .+..++...+.  ..+.++++++.+..
T Consensus         2 ~lGv~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v--~~~~~~~~~l~~~~~g~~v~l~v~R~g   73 (82)
T PF13180_consen    2 GLGVTVQNLSDTGGVVVVSVIPGSPAAKAG-LQPGDIILAINGKPV--NSSEDLVNILSKGKPGDTVTLTVLRDG   73 (82)
T ss_dssp             E-SEEEEECSCSSSEEEEEESTTSHHHHTT-S-TTEEEEEETTEES--SSHHHHHHHHHCSSTTSEEEEEEEETT
T ss_pred             EECeEEEEccCCCeEEEEEeCCCCcHHHCC-CCCCcEEEEECCEEc--CCHHHHHHHHHhCCCCCEEEEEEEECC
Confidence            478888877544599999999999999999 699999999999999  45678888874  36799999999965

...

>KOG3605|consensus

Probab=98.86  E-value=3.7e-09  Score=102.25  Aligned_cols=87  Identities=29%  Similarity=0.492  Sum_probs=76.5

Q ss_pred             CCceEEEEEee-CCCCCCeEEeccCCC---CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        132 EETVKIVQLVK-SNEPLGATIKTDEES---GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       132 ~~~~r~V~l~k-~~~~lG~ti~~~~~~---~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      .+..|.|.+.| .|+.||+.|...-..   .-++|+..++||||+|+|.|..||+|+.|||.++.|+....++.+||+..
T Consensus       643 kE~qKEVvv~K~kGEiLGVViVESGWGSmLPTVViAnmm~~GpAarsgkLnIGDQiiaING~SLVGLPLstcQs~Ik~~K  722 (829)
T KOG3605|consen  643 KENQKEVVLEKHKGEILGVVIVESGWGSILPTVVIANMMHGGPAARSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLK  722 (829)
T ss_pred             hcccceeeeecccCceeeEEEEecCccccchHHHHHhcccCChhhhcCCccccceeEeecCceeccccHHHHHHHHhccc
Confidence            47789999999 999999998764222   26779999999999999999999999999999999999999999999864


Q ss_pred             --CeEEEEEEeCC
Q psy14174        208 --GTITFKLIPAD  218 (269)
Q Consensus       208 --~~v~l~v~p~~  218 (269)
                        ..|+|+|++|.
T Consensus       723 nQT~VkltiV~cp  735 (829)
T KOG3605|consen  723 NQTAVKLNIVSCP  735 (829)
T ss_pred             ccceEEEEEecCC
Confidence              56899999975

>PF02828 L27: L27 domain; InterPro: IPR014775 The L27 domain is found in receptor targeting proteins Lin-2 and Lin-7, as well as some protein kinases and human MPP2 protein

Probab=98.86  E-value=1.4e-09  Score=74.78  Aligned_cols=54  Identities=48%  Similarity=0.602  Sum_probs=46.4

Q ss_pred             hHHhHHHHHHHHhhccCCC-hhHHHHHHhccCchhhhhhhhcccccccccCCCCC
Q psy14174         68 AMQISLEVLDVLLSRLALN-DDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLP  121 (269)
Q Consensus        68 ~~~~~~~v~~~l~~~~~~~-~~~~el~~ll~~p~~~~ll~a~d~v~~~~~~~~~p  121 (269)
                      |++++.|+++.|......+ +++.||.++|++|||++|+++||.|+++.|.|..|
T Consensus         1 av~~~~e~L~~L~~~~~~~~~~~~eL~~lL~~p~~~aLl~~hD~va~~~~~~~~p   55 (56)
T PF02828_consen    1 AVQRVLELLEELQSLSSASQEDAQELQQLLQSPHFQALLEVHDKVAQKVYEPPSP   55 (56)
T ss_dssp             HHHHHHHHHHHHHHHTSSTHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTT----
T ss_pred             ChHHHHHHHHHHHhccCCChHHHHHHHHHHcCHHHHHHHHHHHHHHhhcCCCCCC
Confidence            5678999999999988756 89999999999999999999999999999988544

; PDB: 1ZL8_B 1VA8_A 3LRA_A 3UIT_A 1Y74_D 1RSO_B.

>cd00988 PDZ_CTP_protease PDZ domain of C-terminal processing-, tail-specific-, and tricorn proteases, which function in posttranslational protein processing, maturation, and disassembly or degradation, in Bacteria, Archaea, and plant chloroplasts

Probab=98.82  E-value=3.7e-08  Score=72.50  Aligned_cols=70  Identities=29%  Similarity=0.555  Sum_probs=59.9

Q ss_pred             CCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc-CCCeEEEEEEeC
Q psy14174        145 EPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS-SEGTITFKLIPA  217 (269)
Q Consensus       145 ~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~l~v~p~  217 (269)
                      .+||+.+...  ..+++|..|.+++||+++| |++||+|++|||.++.+.++.++...++. .+..+.+++.+.
T Consensus         2 ~~lG~~~~~~--~~~~~V~~v~~~s~a~~~g-l~~GD~I~~vng~~i~~~~~~~~~~~l~~~~~~~i~l~v~r~   72 (85)
T cd00988           2 GGIGLELKYD--DGGLVITSVLPGSPAAKAG-IKAGDIIVAIDGEPVDGLSLEDVVKLLRGKAGTKVRLTLKRG   72 (85)
T ss_pred             eEEEEEEEEc--CCeEEEEEecCCCCHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhcCCCCCEEEEEEEcC
Confidence            3688888764  4689999999999999999 69999999999999998888899988875 467788888775

May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.

>KOG3580|consensus

Probab=98.77  E-value=2.6e-08  Score=95.86  Aligned_cols=80  Identities=26%  Similarity=0.419  Sum_probs=72.2

Q ss_pred             EEEEEee-CCCCCCeEEeccCCCC-------cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        136 KIVQLVK-SNEPLGATIKTDEESG-------KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       136 r~V~l~k-~~~~lG~ti~~~~~~~-------~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      .+|+|+| ++.|||+.|.||.++.       .|+|+.|.+||||+  |+|+.||.|+.|||+++.+..|.-+++.|+.++
T Consensus        10 hTvTL~kdp~rGFGIAiSGGRDnPhf~~getSiViSDVlpGGPAe--G~LQenDrvvMVNGvsMenv~haFAvQqLrksg   87 (1027)
T KOG3580|consen   10 HTVTLQKDPKRGFGIAISGGRDNPHFENGETSIVISDVLPGGPAE--GLLQENDRVVMVNGVSMENVLHAFAVQQLRKSG   87 (1027)
T ss_pred             heeeeecCCCCcceeEeecCCCCCCccCCceeEEEeeccCCCCcc--cccccCCeEEEEcCcchhhhHHHHHHHHHHhhc
Confidence            4689999 8889999999986432       68999999999996  889999999999999999999999999999999


Q ss_pred             CeEEEEEEeC
Q psy14174        208 GTITFKLIPA  217 (269)
Q Consensus       208 ~~v~l~v~p~  217 (269)
                      ....++|.+.
T Consensus        88 K~A~ItvkRp   97 (1027)
T KOG3580|consen   88 KVAAITVKRP   97 (1027)
T ss_pred             cceeEEeccc
Confidence            9988888764

>KOG3553|consensus

Probab=98.71  E-value=1.4e-08  Score=76.75  Aligned_cols=68  Identities=25%  Similarity=0.377  Sum_probs=56.3

Q ss_pred             CCeEEeccCC-----------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEE
Q psy14174        147 LGATIKTDEE-----------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLI  215 (269)
Q Consensus       147 lG~ti~~~~~-----------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~  215 (269)
                      +||.|-||-+           +.||||.+|..||||+++| |+.+|.|++|||-++.-++|++++..+++ ...+.+.|.
T Consensus        37 ~GFkIGGGIDQDp~k~Pf~ytD~GiYvT~V~eGsPA~~AG-LrihDKIlQvNG~DfTMvTHd~Avk~i~k-~~vl~mLVa  114 (124)
T KOG3553|consen   37 LGFKIGGGIDQDPSKNPFSYTDKGIYVTRVSEGSPAEIAG-LRIHDKILQVNGWDFTMVTHDQAVKRITK-EEVLRMLVA  114 (124)
T ss_pred             EEEEeccccCCCcccCCCCcCCccEEEEEeccCChhhhhc-ceecceEEEecCceeEEEEhHHHHHHhhH-hHHHHHHHH
Confidence            6999988721           3499999999999999999 59999999999999999999999999976 333444444


Q ss_pred             e
Q psy14174        216 P  216 (269)
Q Consensus       216 p  216 (269)
                      +
T Consensus       115 R  115 (124)
T KOG3553|consen  115 R  115 (124)
T ss_pred             h
Confidence            4

>KOG3571|consensus

Probab=98.63  E-value=9.9e-08  Score=90.31  Aligned_cols=83  Identities=27%  Similarity=0.404  Sum_probs=69.3

Q ss_pred             EEEEEee-CCCCCCeEEeccC---CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc---CCC
Q psy14174        136 KIVQLVK-SNEPLGATIKTDE---ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS---SEG  208 (269)
Q Consensus       136 r~V~l~k-~~~~lG~ti~~~~---~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~---~~~  208 (269)
                      -+|.|-- .-..||++|.|..   +++||||..|++||+-+..|+|.+||.|++||.+++++++-++++..||.   ..+
T Consensus       251 ITV~LnMe~vnfLGiSivgqsn~rgDggIYVgsImkgGAVA~DGRIe~GDMiLQVNevsFENmSNd~AVrvLREaV~~~g  330 (626)
T KOG3571|consen  251 ITVTLNMETVNFLGISIVGQSNARGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNEVSFENMSNDQAVRVLREAVSRPG  330 (626)
T ss_pred             EEEEecccccccceeEeecccCcCCCCceEEeeeccCceeeccCccCccceEEEeeecchhhcCchHHHHHHHHHhccCC
Confidence            3344433 3345999999942   35799999999999999999999999999999999999999999999986   467


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .++|+|..+-
T Consensus       331 Pi~ltvAk~~  340 (626)
T KOG3571|consen  331 PIKLTVAKCW  340 (626)
T ss_pred             CeEEEEeecc
Confidence            7999988753

>KOG3552|consensus

Probab=98.53  E-value=9.5e-08  Score=95.65  Aligned_cols=76  Identities=25%  Similarity=0.437  Sum_probs=67.4

Q ss_pred             eEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      +|.|.+++ ...|||.+..|   .+++|..|.+|||++  |.|++||+|+.|||.+|....++.+++++|.+..+|.|+|
T Consensus        56 pr~vq~~r-~~~lGFgfvag---rPviVr~VT~GGps~--GKL~PGDQIl~vN~Epv~daprervIdlvRace~sv~ltV  129 (1298)
T KOG3552|consen   56 PRQVQLQR-NASLGFGFVAG---RPVIVRFVTEGGPSI--GKLQPGDQILAVNGEPVKDAPRERVIDLVRACESSVNLTV  129 (1298)
T ss_pred             chhhhhhc-cccccceeecC---CceEEEEecCCCCcc--ccccCCCeEEEecCcccccccHHHHHHHHHHHhhhcceEE
Confidence            78888887 33566666776   699999999999986  8899999999999999999999999999999999999998


Q ss_pred             Ee
Q psy14174        215 IP  216 (269)
Q Consensus       215 ~p  216 (269)
                      ..
T Consensus       130 ~q  131 (1298)
T KOG3552|consen  130 CQ  131 (1298)
T ss_pred             ec
Confidence            75

>KOG3651|consensus

Probab=98.49  E-value=5.2e-07  Score=80.80  Aligned_cols=80  Identities=30%  Similarity=0.445  Sum_probs=70.6

Q ss_pred             EEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        137 IVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       137 ~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      .|.|.| ...-+|++|-||... .-+||-+|..++||.+.|.++.||+|+.|||++|.|.+.-++.++++.+.+.|++.+
T Consensus         7 ~v~ltKD~~nliGISIGGGapyCPClYiVQvFD~tPAa~dG~i~~GDEi~avNg~svKGktKveVAkmIQ~~~~eV~Ihy   86 (429)
T KOG3651|consen    7 TVELTKDEKNLIGISIGGGAPYCPCLYIVQVFDKTPAAKDGRIRCGDEIVAVNGISVKGKTKVEVAKMIQVSLNEVKIHY   86 (429)
T ss_pred             cEEEeeccccceeEEecCCCCcCCeEEEEEeccCCchhccCccccCCeeEEecceeecCccHHHHHHHHHHhccceEEEe
Confidence            478999 555679999998543 367899999999999999999999999999999999999999999999999998887


Q ss_pred             Ee
Q psy14174        215 IP  216 (269)
Q Consensus       215 ~p  216 (269)
                      -.
T Consensus        87 NK   88 (429)
T KOG3651|consen   87 NK   88 (429)
T ss_pred             hh
Confidence            43

>cd00990 PDZ_glycyl_aminopeptidase PDZ domain associated with archaeal and bacterial M61 glycyl-aminopeptidases

Probab=98.48  E-value=8.9e-07  Score=64.35  Aligned_cols=66  Identities=30%  Similarity=0.457  Sum_probs=50.7

Q ss_pred             CCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        147 LGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       147 lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      +|+.+...  .++++|..|.++|+|+++| |++||+|++|||.++..  ..++...+ ..+..+.+++.+.+
T Consensus         3 ~G~~~~~~--~~~~~V~~V~~~s~a~~aG-l~~GD~I~~Ing~~v~~--~~~~l~~~-~~~~~v~l~v~r~g   68 (80)
T cd00990           3 LGLTLDKE--EGLGKVTFVRDDSPADKAG-LVAGDELVAVNGWRVDA--LQDRLKEY-QAGDPVELTVFRDD   68 (80)
T ss_pred             ccEEEEcc--CCcEEEEEECCCChHHHhC-CCCCCEEEEECCEEhHH--HHHHHHhc-CCCCEEEEEEEECC
Confidence            68877654  4579999999999999999 69999999999999965  33333222 35678888888754

May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand is presumed to form the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.

>cd00989 PDZ_metalloprotease PDZ domain of bacterial and plant zinc metalloprotases, presumably membrane-associated or integral membrane proteases, which may be involved in signalling and regulatory mechanisms

Probab=98.46  E-value=1.3e-06  Score=63.11  Aligned_cols=67  Identities=21%  Similarity=0.373  Sum_probs=52.5

Q ss_pred             CCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC-CCeEEEEEEeCC
Q psy14174        147 LGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-EGTITFKLIPAD  218 (269)
Q Consensus       147 lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~-~~~v~l~v~p~~  218 (269)
                      +||..-..  ..+++|..|.++++|+++| |++||+|++|||.++.  +..++...++.. +..+.+++.+.+
T Consensus         3 ~~~~~g~~--~~~~~V~~v~~~s~a~~~g-l~~GD~I~~ing~~i~--~~~~~~~~l~~~~~~~~~l~v~r~~   70 (79)
T cd00989           3 LGFVPGGP--PIEPVIGEVVPGSPAAKAG-LKAGDRILAINGQKIK--SWEDLVDAVQENPGKPLTLTVERNG   70 (79)
T ss_pred             eeEeccCC--ccCcEEEeECCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHHCCCceEEEEEEECC
Confidence            45544332  3468999999999999999 6999999999999996  456788888664 567888887743

May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.

>cd00991 PDZ_archaeal_metalloprotease PDZ domain of archaeal zinc metalloprotases, presumably membrane-associated or integral membrane proteases, which may be involved in signalling and regulatory mechanisms

Probab=98.46  E-value=1.3e-06  Score=63.79  Aligned_cols=59  Identities=25%  Similarity=0.513  Sum_probs=50.5

Q ss_pred             CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCeEEEEEEeCC
Q psy14174        157 SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGTITFKLIPAD  218 (269)
Q Consensus       157 ~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~v~l~v~p~~  218 (269)
                      ..|++|.+|.++|+|+++| |++||+|++|||.++.  +..++...+...  +..+.+++.+.+
T Consensus         9 ~~Gv~V~~V~~~spa~~aG-L~~GDiI~~Ing~~v~--~~~d~~~~l~~~~~g~~v~l~v~r~g   69 (79)
T cd00991           9 VAGVVIVGVIVGSPAENAV-LHTGDVIYSINGTPIT--TLEDFMEALKPTKPGEVITVTVLPST   69 (79)
T ss_pred             CCcEEEEEECCCChHHhcC-CCCCCEEEEECCEEcC--CHHHHHHHHhcCCCCCEEEEEEEECC
Confidence            4589999999999999999 6999999999999996  567888888763  678888888754

May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.

>COG0793 Prc Periplasmic protease [Cell envelope biogenesis, outer membrane]

Probab=98.39  E-value=1.5e-06  Score=82.63  Aligned_cols=73  Identities=21%  Similarity=0.467  Sum_probs=65.5

Q ss_pred             CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC-CCeEEEEEEeC
Q psy14174        143 SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-EGTITFKLIPA  217 (269)
Q Consensus       143 ~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~-~~~v~l~v~p~  217 (269)
                      .-+++|+.+..... +++.|..+.+|+||+++| |++||.|+.|||.++.+++.++++..++.. |..|+|++.|.
T Consensus        98 ~~~GiG~~i~~~~~-~~~~V~s~~~~~PA~kag-i~~GD~I~~IdG~~~~~~~~~~av~~irG~~Gt~V~L~i~r~  171 (406)
T COG0793          98 EFGGIGIELQMEDI-GGVKVVSPIDGSPAAKAG-IKPGDVIIKIDGKSVGGVSLDEAVKLIRGKPGTKVTLTILRA  171 (406)
T ss_pred             cccceeEEEEEecC-CCcEEEecCCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHhCCCCCCeEEEEEEEc
Confidence            56788999988643 689999999999999999 899999999999999999999999999875 67789999996

>TIGR00225 prc C-terminal peptidase (prc)

Probab=98.33  E-value=2.4e-06  Score=79.17  Aligned_cols=70  Identities=24%  Similarity=0.574  Sum_probs=59.7

Q ss_pred             CCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc-CCCeEEEEEEeCC
Q psy14174        146 PLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS-SEGTITFKLIPAD  218 (269)
Q Consensus       146 ~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~l~v~p~~  218 (269)
                      ++|+.+...  .++++|..|.++|||+++| |++||+|++|||.++.+++..++..+++. .+..+.+++.+.+
T Consensus        52 ~lG~~~~~~--~~~~~V~~V~~~spA~~aG-L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g  122 (334)
T TIGR00225        52 GIGIQVGMD--DGEIVIVSPFEGSPAEKAG-IKPGDKIIKINGKSVAGMSLDDAVALIRGKKGTKVSLEILRAG  122 (334)
T ss_pred             EEEEEEEEE--CCEEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhccCCCCCEEEEEEEeCC
Confidence            578888654  4589999999999999999 69999999999999998877788888765 5678899998864

A C-terminal peptidase with different substrates in different species including processing of D1 protein of the photosystem II reaction center in higher plants and cleavage of a peptide of 11 residues from the precursor form of penicillin-binding protein in E.coli E.coli and H influenza have the most distal branch of the tree and their proteins have an N-terminal 200 amino acids that show no homology to other proteins in the database.

>PLN00049 carboxyl-terminal processing protease; Provisional

Probab=98.32  E-value=2.4e-06  Score=80.87  Aligned_cols=73  Identities=25%  Similarity=0.376  Sum_probs=59.8

Q ss_pred             CCCCeEEeccCCC----CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc-CCCeEEEEEEeCC
Q psy14174        145 EPLGATIKTDEES----GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS-SEGTITFKLIPAD  218 (269)
Q Consensus       145 ~~lG~ti~~~~~~----~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~l~v~p~~  218 (269)
                      .++|+.+...+..    .+++|..|.+||||+++| |+.||+|++|||+++.+++..++..+++. .+..+.+++.+.+
T Consensus        85 ~GiG~~~~~~~~~~~~~~g~~V~~V~~~SPA~~aG-l~~GD~Iv~InG~~v~~~~~~~~~~~l~g~~g~~v~ltv~r~g  162 (389)
T PLN00049         85 TGVGLEVGYPTGSDGPPAGLVVVAPAPGGPAARAG-IRPGDVILAIDGTSTEGLSLYEAADRLQGPEGSSVELTLRRGP  162 (389)
T ss_pred             eEEEEEEEEccCCCCccCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEECC
Confidence            3677777543221    279999999999999999 69999999999999999888888888875 5678899988754

>PF02828 L27: L27 domain; InterPro: IPR014775 The L27 domain is found in receptor targeting proteins Lin-2 and Lin-7, as well as some protein kinases and human MPP2 protein

Probab=98.29  E-value=8.2e-07  Score=60.91  Aligned_cols=48  Identities=40%  Similarity=0.499  Sum_probs=43.9

Q ss_pred             hHHHHHHHHHHhhcccccChhhHHHHHHHhcChhHHHHHhhhhccccc
Q psy14174         12 SVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNE   59 (269)
Q Consensus        12 ~~~~vL~~L~~~~~~~~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~~   59 (269)
                      |++.+++.|+++......+..|..+|+.+|++|.|++|+++||+|...
T Consensus         1 av~~~~e~L~~L~~~~~~~~~~~~eL~~lL~~p~~~aLl~~hD~va~~   48 (56)
T PF02828_consen    1 AVQRVLELLEELQSLSSASQEDAQELQQLLQSPHFQALLEVHDKVAQK   48 (56)
T ss_dssp             HHHHHHHHHHHHHHHTSSTHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHhccCCChHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence            578899999999888776679999999999999999999999999875

; PDB: 1ZL8_B 1VA8_A 3LRA_A 3UIT_A 1Y74_D 1RSO_B.

>KOG3938|consensus

Probab=98.26  E-value=1.2e-06  Score=77.14  Aligned_cols=82  Identities=34%  Similarity=0.527  Sum_probs=70.7

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC--CeE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE--GTI  210 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~--~~v  210 (269)
                      ...+.|++.|+...||+||..+ +.+..||.+|.+||..+|--.+++||-|-+|||.++.|+.|.++..+|+...  ...
T Consensus       125 Gq~kEv~v~KsedalGlTITDN-G~GyAFIKrIkegsvidri~~i~VGd~IEaiNge~ivG~RHYeVArmLKel~rge~f  203 (334)
T KOG3938|consen  125 GQAKEVEVVKSEDALGLTITDN-GAGYAFIKRIKEGSVIDRIEAICVGDHIEAINGESIVGKRHYEVARMLKELPRGETF  203 (334)
T ss_pred             CcceeEEEEecccccceEEeeC-CcceeeeEeecCCchhhhhhheeHHhHHHhhcCccccchhHHHHHHHHHhcccCCee
Confidence            3457789999999999999875 2468899999999999999889999999999999999999999999999854  455


Q ss_pred             EEEEE
Q psy14174        211 TFKLI  215 (269)
Q Consensus       211 ~l~v~  215 (269)
                      ++++.
T Consensus       204 tlrLi  208 (334)
T KOG3938|consen  204 TLRLI  208 (334)
T ss_pred             EEEee
Confidence            55544

>cd00987 PDZ_serine_protease PDZ domain of tryspin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis

Probab=98.24  E-value=7.8e-06  Score=60.41  Aligned_cols=58  Identities=26%  Similarity=0.426  Sum_probs=48.7

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~v~l~v~p~~  218 (269)
                      .+++|..|.++++|+++| |++||+|++|||..+.+  ..++...+...  +..+.+++.+.+
T Consensus        24 ~g~~V~~v~~~s~a~~~g-l~~GD~I~~Ing~~i~~--~~~~~~~l~~~~~~~~i~l~v~r~g   83 (90)
T cd00987          24 KGVLVASVDPGSPAAKAG-LKPGDVILAVNGKPVKS--VADLRRALAELKPGDKVTLTVLRGG   83 (90)
T ss_pred             CEEEEEEECCCCHHHHcC-CCcCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEECC
Confidence            489999999999999999 69999999999999964  45677777654  678899988754

May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.

>PRK11186 carboxy-terminal protease; Provisional

Probab=98.23  E-value=3e-06  Score=84.90  Aligned_cols=73  Identities=29%  Similarity=0.557  Sum_probs=60.2

Q ss_pred             CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEEC--C---EecCCCChHHHHHHHHcC-CCeEEEEEEe
Q psy14174        143 SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN--G---INVEGKTPGDVLKILQSS-EGTITFKLIP  216 (269)
Q Consensus       143 ~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VN--G---~~v~~~~~~~~~~~l~~~-~~~v~l~v~p  216 (269)
                      .-+|+|+.+...  .++++|.+|.+||||++++.|++||+|++||  |   .++.+++.++++.+|++. |..|+|+|.+
T Consensus       242 ~~~GIGa~l~~~--~~~~~V~~vipGsPA~ka~gLk~GD~IlaVn~~g~~~~dv~g~~~~~vv~lirG~~Gt~V~LtV~r  319 (667)
T PRK11186        242 SLEGIGAVLQMD--DDYTVINSLVAGGPAAKSKKLSVGDKIVGVGQDGKPIVDVIGWRLDDVVALIKGPKGSKVRLEILP  319 (667)
T ss_pred             ceeEEEEEEEEe--CCeEEEEEccCCChHHHhCCCCCCCEEEEECCCCCcccccccCCHHHHHHHhcCCCCCEEEEEEEe
Confidence            345789888765  4579999999999999983379999999999  4   366789999999999875 6678999987


Q ss_pred             C
Q psy14174        217 A  217 (269)
Q Consensus       217 ~  217 (269)
                      .
T Consensus       320 ~  320 (667)
T PRK11186        320 A  320 (667)
T ss_pred             C
Confidence            3

>KOG3542|consensus

Probab=98.22  E-value=2.2e-06  Score=83.82  Aligned_cols=82  Identities=32%  Similarity=0.468  Sum_probs=69.3

Q ss_pred             CceEEEEEee--CCCCCCeEEeccCCCC-cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        133 ETVKIVQLVK--SNEPLGATIKTDEESG-KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       133 ~~~r~V~l~k--~~~~lG~ti~~~~~~~-~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      ...|.|.|.|  ...++-|.+.||...+ +|||..|.+|+.|++.| ++.||+|++|||++..+.+...+.++|++. ..
T Consensus       534 AK~RqviLtk~sre~pl~f~L~GGsEkGfgifV~~V~pgskAa~~G-lKRgDqilEVNgQnfenis~~KA~eiLrnn-th  611 (1283)
T KOG3542|consen  534 AKPRQVILTKASREDPLMFRLVGGSEKGFGIFVAEVFPGSKAAREG-LKRGDQILEVNGQNFENISAKKAEEILRNN-TH  611 (1283)
T ss_pred             ccceeEEEecccccCCceeEeccCccccceeEEeeecCCchHHHhh-hhhhhhhhhccccchhhhhHHHHHHHhcCC-ce
Confidence            4568899999  5668999999986444 99999999999999999 599999999999999999999999999754 34


Q ss_pred             EEEEEEe
Q psy14174        210 ITFKLIP  216 (269)
Q Consensus       210 v~l~v~p  216 (269)
                      ++++|..
T Consensus       612 LtltvKt  618 (1283)
T KOG3542|consen  612 LTLTVKT  618 (1283)
T ss_pred             EEEEEec
Confidence            5555543

>smart00569 L27 domain in receptor targeting proteins Lin-2 and Lin-7

Probab=98.21  E-value=1.4e-06  Score=59.10  Aligned_cols=52  Identities=48%  Similarity=0.587  Sum_probs=45.8

Q ss_pred             HHhHHHHHHHHhhccCCChhHHHHHHhccCchhhhhhhhcccccccccCCCC
Q psy14174         69 MQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRL  120 (269)
Q Consensus        69 ~~~~~~v~~~l~~~~~~~~~~~el~~ll~~p~~~~ll~a~d~v~~~~~~~~~  120 (269)
                      ++.+.++++.|......+.+..+|.++|++|||++++.+||.++...|.+.+
T Consensus         2 ~~~~~~~L~~l~~~~~~~~~~~~L~~ll~~~~~~all~~hd~v~~~~~~~~~   53 (55)
T smart00569        2 VQRLLELLEELQSLLSPSEDLQELRRLLQSPHLQALLKIHDKVAETVYDPPL   53 (55)
T ss_pred             hHHHHHHHHHHHhccCCCccHHHHHHHHcCHHHHHHHHHHHHHHHHhccCCC
Confidence            5678999999998766568899999999999999999999999999887643

>cd00986 PDZ_LON_protease PDZ domain of ATP-dependent LON serine proteases

Probab=98.15  E-value=2e-05  Score=57.25  Aligned_cols=57  Identities=21%  Similarity=0.387  Sum_probs=47.8

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|..|.+||+|+. | |++||+|++|||.++.  +.+++...+..  .+..+.+++.+.+
T Consensus         8 ~Gv~V~~V~~~s~A~~-g-L~~GD~I~~Ing~~v~--~~~~~~~~l~~~~~~~~v~l~v~r~g   66 (79)
T cd00986           8 HGVYVTSVVEGMPAAG-K-LKAGDHIIAVDGKPFK--EAEELIDYIQSKKEGDTVKLKVKREE   66 (79)
T ss_pred             cCEEEEEECCCCchhh-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECC
Confidence            4799999999999986 8 7999999999999995  46678888864  4678889888754

Most PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this bacterial subfamily of protease-associated PDZ domains a C-terminal beta-strand is thought to form the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.

>KOG3605|consensus

Probab=98.13  E-value=1.2e-06  Score=85.34  Aligned_cols=79  Identities=27%  Similarity=0.567  Sum_probs=68.1

Q ss_pred             CceEEEEEeeC--CCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        133 ETVKIVQLVKS--NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k~--~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ..+.+|.|.|+  ..-|||++..|      +|-.++.||.|+|.| +++|.+|++|||++|....|+.++++|..+-|.|
T Consensus       735 pPV~~V~I~RPd~kyQLGFSVQNG------iICSLlRGGIAERGG-VRVGHRIIEINgQSVVA~pHekIV~lLs~aVGEI  807 (829)
T KOG3605|consen  735 PPVTTVLIRRPDLRYQLGFSVQNG------IICSLLRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVQLLSNAVGEI  807 (829)
T ss_pred             CCceEEEeecccchhhccceeeCc------EeehhhcccchhccC-ceeeeeEEEECCceEEeccHHHHHHHHHHhhhhh
Confidence            34567778883  44689999876      577888999999999 7999999999999999999999999999999999


Q ss_pred             EEEEEeCC
Q psy14174        211 TFKLIPAD  218 (269)
Q Consensus       211 ~l~v~p~~  218 (269)
                      .++-.|..
T Consensus       808 hMKTMPas  815 (829)
T KOG3605|consen  808 HMKTMPAA  815 (829)
T ss_pred             hhhcchHH
Confidence            98887754

>smart00569 L27 domain in receptor targeting proteins Lin-2 and Lin-7

Probab=97.87  E-value=2.2e-05  Score=53.14  Aligned_cols=47  Identities=43%  Similarity=0.575  Sum_probs=41.0

Q ss_pred             hHHHHHHHHHHhhcccccChhhHHHHHHHhcChhHHHHHhhhhccccc
Q psy14174         12 SVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNE   59 (269)
Q Consensus        12 ~~~~vL~~L~~~~~~~~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~~   59 (269)
                      +++.+++.|+++....... +|+.||+++|++|.|++|+++|+++...
T Consensus         1 ~~~~~~~~L~~l~~~~~~~-~~~~~L~~ll~~~~~~all~~hd~v~~~   47 (55)
T smart00569        1 AVQRLLELLEELQSLLSPS-EDLQELRRLLQSPHLQALLKIHDKVAET   47 (55)
T ss_pred             ChHHHHHHHHHHHhccCCC-ccHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence            4678999999998776544 7999999999999999999999999875

>PRK10779 zinc metallopeptidase RseP; Provisional

Probab=97.85  E-value=4.7e-05  Score=73.39  Aligned_cols=57  Identities=23%  Similarity=0.286  Sum_probs=45.8

Q ss_pred             cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHH--cCCCeEEEEEEeCC
Q psy14174        159 KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQ--SSEGTITFKLIPAD  218 (269)
Q Consensus       159 ~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~--~~~~~v~l~v~p~~  218 (269)
                      ..+|..|.++|||+++| |++||+|++|||+++.+.  +++...+.  ..+.++.+++.+.+
T Consensus       127 ~~lV~~V~~~SpA~kAG-Lk~GDvI~~vnG~~V~~~--~~l~~~v~~~~~g~~v~v~v~R~g  185 (449)
T PRK10779        127 RPVVGEIAPNSIAAQAQ-IAPGTELKAVDGIETPDW--DAVRLALVSKIGDESTTITVAPFG  185 (449)
T ss_pred             CccccccCCCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhhccCCceEEEEEeCC
Confidence            34689999999999999 699999999999999654  45554443  34567899998865

>TIGR02037 degP_htrA_DO periplasmic serine protease, Do/DeqQ family

Probab=97.84  E-value=0.00011  Score=70.31  Aligned_cols=58  Identities=22%  Similarity=0.461  Sum_probs=49.0

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .+++|..|.+||||+++| |++||+|++|||..+.  +..++...+..  .+..+.+++.+.+
T Consensus       257 ~Gv~V~~V~~~spA~~aG-L~~GDvI~~Vng~~i~--~~~~~~~~l~~~~~g~~v~l~v~R~g  316 (428)
T TIGR02037       257 RGALVAQVLPGSPAEKAG-LKAGDVILSVNGKPIS--SFADLRRAIGTLKPGKKVTLGILRKG  316 (428)
T ss_pred             CceEEEEccCCCChHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence            589999999999999999 6999999999999996  45567666654  5678899988864

This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures.

>TIGR01713 typeII_sec_gspC general secretion pathway protein C

Probab=97.82  E-value=0.00012  Score=65.59  Aligned_cols=69  Identities=16%  Similarity=0.236  Sum_probs=53.9

Q ss_pred             CCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        147 LGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       147 lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      +|++.....+ ..|+.|..+.++++|++.| |+.||+|++|||.++.  +.+++.+++.+  .+..++++|.+.+
T Consensus       179 lgi~p~~~~g~~~G~~v~~v~~~s~a~~aG-Lr~GDvIv~ING~~i~--~~~~~~~~l~~~~~~~~v~l~V~R~G  250 (259)
T TIGR01713       179 IRLSPVMKNDKLEGYRLNPGKDPSLFYKSG-LQDGDIAVALNGLDLR--DPEQAFQALQMLREETNLTLTVERDG  250 (259)
T ss_pred             EeEEEEEeCCceeEEEEEecCCCCHHHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCeEEEEEEECC
Confidence            4555432211 2489999999999999999 6999999999999995  45677777766  4468999999865

This model represents GspC, protein C of the main terminal branch of the general secretion pathway, also called type II secretion. This system transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens.

>PRK10942 serine endoprotease; Provisional

Probab=97.71  E-value=0.00015  Score=70.28  Aligned_cols=58  Identities=26%  Similarity=0.382  Sum_probs=51.7

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      .+++|..|.++|+|+++| |++||+|++|||+++.  +.+++.++++..+..+.|+|.+.+
T Consensus       408 ~gvvV~~V~~~S~A~~aG-L~~GDvIv~VNg~~V~--s~~dl~~~l~~~~~~v~l~V~R~g  465 (473)
T PRK10942        408 KGVVVDNVKPGTPAAQIG-LKKGDVIIGANQQPVK--NIAELRKILDSKPSVLALNIQRGD  465 (473)
T ss_pred             CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhCCCeEEEEEEECC
Confidence            479999999999999999 6999999999999995  567999999887788899998854

>PRK10139 serine endoprotease; Provisional

Probab=97.67  E-value=0.00015  Score=70.00  Aligned_cols=58  Identities=21%  Similarity=0.397  Sum_probs=51.2

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      .|++|..|.++|+|+++| |++||+|++|||.++  .+.+++...+++..+.+.|++.+.+
T Consensus       390 ~Gv~V~~V~~~spA~~aG-L~~GD~I~~Ing~~v--~~~~~~~~~l~~~~~~v~l~v~R~g  447 (455)
T PRK10139        390 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRV--NSIAEMRKVLAAKPAIIALQIVRGN  447 (455)
T ss_pred             CceEEEEeCCCChHHHcC-CCCCCEEEEECCEEc--CCHHHHHHHHHhCCCeEEEEEEECC
Confidence            479999999999999999 699999999999999  4567899999876788899998854

>PRK10139 serine endoprotease; Provisional

Probab=97.64  E-value=0.00025  Score=68.56  Aligned_cols=58  Identities=14%  Similarity=0.332  Sum_probs=49.5

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|..|.++|||+++| |++||+|++|||+++.  +..++...+..  .+..+.+++.+.+
T Consensus       290 ~Gv~V~~V~~~SpA~~AG-L~~GDvIl~InG~~V~--s~~dl~~~l~~~~~g~~v~l~V~R~G  349 (455)
T PRK10139        290 RGAFVSEVLPNSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNG  349 (455)
T ss_pred             CceEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence            488999999999999999 6999999999999995  55788777754  5778889888764

>TIGR02037 degP_htrA_DO periplasmic serine protease, Do/DeqQ family

Probab=97.63  E-value=0.0002  Score=68.54  Aligned_cols=58  Identities=26%  Similarity=0.496  Sum_probs=51.1

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .+++|..|.++|+|+++| |++||.|++|||.++.  +.+++.+++++  .++.+.|++.+.+
T Consensus       362 ~Gv~V~~V~~~SpA~~aG-L~~GDvI~~Ing~~V~--s~~d~~~~l~~~~~g~~v~l~v~R~g  421 (428)
T TIGR02037       362 KGVVVTKVVSGSPAARAG-LQPGDVILSVNQQPVS--SVAELRKVLDRAKKGGRVALLILRGG  421 (428)
T ss_pred             CceEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence            589999999999999999 6999999999999995  56788888875  4788999998854

This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures.

>TIGR02038 protease_degS periplasmic serine pepetdase DegS

Probab=97.61  E-value=0.00025  Score=66.27  Aligned_cols=58  Identities=21%  Similarity=0.350  Sum_probs=49.6

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|.+|.++|||+++| |++||+|++|||.++.  +..++...++.  .++.+.+++.+..
T Consensus       278 ~Gv~V~~V~~~spA~~aG-L~~GDvI~~Ing~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~g  337 (351)
T TIGR02038       278 RGIVITGVDPNGPAARAG-ILVRDVILKYDGKDVI--GAEELMDRIAETRPGSKVMVTVLRQG  337 (351)
T ss_pred             ccceEeecCCCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence            489999999999999999 6999999999999995  45677777764  5788999998854

This family consists of the periplasmic serine protease DegS (HhoB), a shorter paralog of protease DO (HtrA, DegP) and DegQ (HhoA). It is found in E. coli and several other Proteobacteria of the gamma subdivision. It contains a trypsin domain and a single copy of PDZ domain (in contrast to DegP with two copies). A critical role of this DegS is to sense stress in the periplasm and partially degrade an inhibitor of sigma(E).

>TIGR00054 RIP metalloprotease RseP

Probab=97.59  E-value=0.00026  Score=67.75  Aligned_cols=57  Identities=23%  Similarity=0.284  Sum_probs=46.9

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPA  217 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~  217 (269)
                      .+.+|..|.++|||+++| +++||+|++|||.++.  +..++.+.+....+.+.+.+.+.
T Consensus       128 ~g~~V~~V~~~SpA~~AG-L~~GDvI~~vng~~v~--~~~dl~~~ia~~~~~v~~~I~r~  184 (420)
T TIGR00054       128 VGPVIELLDKNSIALEAG-IEPGDEILSVNGNKIP--GFKDVRQQIADIAGEPMVEILAE  184 (420)
T ss_pred             CCceeeccCCCCHHHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhhcccceEEEEEe
Confidence            467899999999999999 6999999999999995  44566666655557888888774

A model that detects fragments as well matches a number of members of the PEPTIDASE FAMILY S2C. The region of match appears not to overlap the active site domain.

>PRK10779 zinc metallopeptidase RseP; Provisional

Probab=97.58  E-value=0.00033  Score=67.58  Aligned_cols=57  Identities=18%  Similarity=0.367  Sum_probs=48.9

Q ss_pred             cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc-CCCeEEEEEEeCC
Q psy14174        159 KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS-SEGTITFKLIPAD  218 (269)
Q Consensus       159 ~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~l~v~p~~  218 (269)
                      +.+|..|.+||||+++| |++||+|++|||.++.  +.+++...++. .+..+.+++.+.+
T Consensus       222 ~~vV~~V~~~SpA~~AG-L~~GDvIl~Ing~~V~--s~~dl~~~l~~~~~~~v~l~v~R~g  279 (449)
T PRK10779        222 EPVLAEVQPNSAASKAG-LQAGDRIVKVDGQPLT--QWQTFVTLVRDNPGKPLALEIERQG  279 (449)
T ss_pred             CcEEEeeCCCCHHHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhCCCCEEEEEEEECC
Confidence            57899999999999999 6999999999999994  56788888866 4567899988865

>PRK10898 serine endoprotease; Provisional

Probab=97.56  E-value=0.00039  Score=65.05  Aligned_cols=58  Identities=24%  Similarity=0.326  Sum_probs=48.3

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHH--cCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQ--SSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~--~~~~~v~l~v~p~~  218 (269)
                      .|++|..|.++|||+++| |++||+|++|||.++.+  ..+....+.  ..+..+.+++.+.+
T Consensus       279 ~Gv~V~~V~~~spA~~aG-L~~GDvI~~Ing~~V~s--~~~l~~~l~~~~~g~~v~l~v~R~g  338 (353)
T PRK10898        279 QGIVVNEVSPDGPAAKAG-IQVNDLIISVNNKPAIS--ALETMDQVAEIRPGSVIPVVVMRDD  338 (353)
T ss_pred             CeEEEEEECCCChHHHcC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECC
Confidence            589999999999999999 69999999999999954  456666664  35778999998854

>PRK10942 serine endoprotease; Provisional

Probab=97.56  E-value=0.00038  Score=67.57  Aligned_cols=58  Identities=19%  Similarity=0.347  Sum_probs=48.9

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|..|.++|||+++| |+.||+|++|||..+.  +..++...+..  .+..+.+++.+..
T Consensus       311 ~GvlV~~V~~~SpA~~AG-L~~GDvIl~InG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~G  370 (473)
T PRK10942        311 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPIS--SFAALRAQVGTMPVGSKLTLGLLRDG  370 (473)
T ss_pred             CceEEEEECCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence            489999999999999999 6999999999999995  45677777754  4678888888764

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=97.55  E-value=5.7e-05  Score=51.31  Aligned_cols=34  Identities=47%  Similarity=0.793  Sum_probs=27.4

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEE-eCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVV-SQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv-~~~d~~W  269 (269)
                      |+||.+||.+..       ...|+|++||+++|+ ++++.+|
T Consensus         1 ~~~a~~d~~~~~-------~~~Ls~~~Gd~i~v~~~~~~~~w   35 (55)
T PF07653_consen    1 YYRAIFDYVAED-------PDELSFKKGDVIEVLGEKDDDGW   35 (55)
T ss_dssp             EEEESSSBESSS-------TTB-EB-TTEEEEEEEEECSTSE
T ss_pred             CEEEeEEECCCC-------CCceEEecCCEEEEEEeecCCCE
Confidence            679999999966       446999999999999 8887777

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>TIGR00054 RIP metalloprotease RseP

Probab=97.54  E-value=0.00034  Score=66.89  Aligned_cols=58  Identities=17%  Similarity=0.304  Sum_probs=49.8

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc-CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS-SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~l~v~p~~  218 (269)
                      .+++|..|.++|||+++| |++||+|++|||+++.  +.+++...++. .+..+.+++.+.+
T Consensus       203 ~g~vV~~V~~~SpA~~aG-L~~GD~Iv~Vng~~V~--s~~dl~~~l~~~~~~~v~l~v~R~g  261 (420)
T TIGR00054       203 IEPVLSDVTPNSPAEKAG-LKEGDYIQSINGEKLR--SWTDFVSAVKENPGKSMDIKVERNG  261 (420)
T ss_pred             cCcEEEEECCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCceEEEEEECC
Confidence            368999999999999999 6999999999999995  56788888876 4567889888865

A model that detects fragments as well matches a number of members of the PEPTIDASE FAMILY S2C. The region of match appears not to overlap the active site domain.

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=97.45  E-value=8e-05  Score=49.10  Aligned_cols=32  Identities=47%  Similarity=0.873  Sum_probs=27.8

Q ss_pred             eeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        231 RAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       231 Ra~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +|+|+|.+..       ...|+|++||+++|+++.|..|
T Consensus         1 ~Alydf~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   32 (48)
T PF00018_consen    1 RALYDFDAED-------PDELSFKKGDIIEVLEKSDDGW   32 (48)
T ss_dssp             EESSCBETSS-------TTBSEB-TTEEEEEEEESSSSE
T ss_pred             CCCeeeCCCC-------CCEEeEECCCEEEEEEecCCCE
Confidence            6899999888       5579999999999999988888

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>KOG0708|consensus

Probab=97.40  E-value=0.00014  Score=67.34  Aligned_cols=83  Identities=28%  Similarity=0.396  Sum_probs=66.9

Q ss_pred             EECCEecCCCChHHHHHHHHcCCCeEEEEEEe--CC--------------------CcCcccccceeeeeecccCCCCCC
Q psy14174        185 EVNGINVEGKTPGDVLKILQSSEGTITFKLIP--AD--------------------NKLGYRESKIRVRAHFDYDASSDP  242 (269)
Q Consensus       185 ~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p--~~--------------------~~~~~~~~~~~vRa~fdy~p~~D~  242 (269)
                      .+||....+.+|.++...++.++.++++++.-  ..                    ..........||+++|||+...+ 
T Consensus         2 ~~~~~~~~~~~~~~~a~~l~~sg~~~~i~~q~~~e~~~~~e~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~d~d~~~~-   80 (359)
T KOG0708|consen    2 SVNGVDGRNATHEDAAAALKTSGDSVYIRAQYRPEEYDKFELKIHDLEVLHVMDSMYQSRQEWRCLYVDALFDYDLDRG-   80 (359)
T ss_pred             cccccccccchHHHHHHHhhcCCCceEEEEEechhhhchhhcccCCcchHHHHHhhhccCCCCceeEeeccccccccCC-
Confidence            57899999999999999999999999888642  21                    01112244689999999999998 


Q ss_pred             CCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        243 YIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       243 ~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                       .|....+++|..|||+|+++..|..|
T Consensus        81 -~~~~~~~~~~~~~~i~~~~~~~~~e~  106 (359)
T KOG0708|consen   81 -SPGYSRAQSFLYGQILHLISRSDDEW  106 (359)
T ss_pred             -CCCcchhhhhhhhhhhhccccccHHH
Confidence             55666699999999999999888777

>PF09060 L27_N: L27_N; InterPro: IPR015145 The L27_N domain plays a role in the biogenesis of tight junctions and in the establishment of cell polarity in epithelial cells

Probab=97.35  E-value=0.00017  Score=47.03  Aligned_cols=45  Identities=24%  Similarity=0.481  Sum_probs=38.4

Q ss_pred             HHHHHHHHHHhhccc--ccChhhHHHHHHHhcChhHHHHHhhhhccc
Q psy14174         13 VSSLLETLQESQSTF--SANDEELLFLSSLLQSKELNALVHVHNSIV   57 (269)
Q Consensus        13 ~~~vL~~L~~~~~~~--~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~   57 (269)
                      +.++|.+|+.++...  .++++|+.++.++++..+|++++++|+.+.
T Consensus         2 leell~sLk~iqh~L~D~qSQ~Dv~lllqLl~~~dFq~A~~IhnaVa   48 (49)
T PF09060_consen    2 LEELLSSLKHIQHCLNDSQSQQDVELLLQLLQNSDFQNAFKIHNAVA   48 (49)
T ss_dssp             HHHHHHHHHHHHCCH-SHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccHhhHHhHHHHHHHHhhHhHHHHHHHHHHhc
Confidence            678999999997775  246889999999999999999999998764

Each L27_N domain consists of three alpha-helices, the first two of which form an antiparallel coiled-coil. Two L27 domains come together to form a four-helical bundle with the antiparallel coiled-coils formed by the first two helices. The third helix of each domain forms another coiled-coil packing at one end of the four-helix bundle, creating a large hydrophobic interface: the hydrophobic interactions are the major force that drives heterodimer formation []. ; PDB: 1Y76_B 3UIT_B 1VF6_C.

>PF14685 Tricorn_PDZ: Tricorn protease PDZ domain; PDB: 1N6F_D 1N6D_C 1N6E_C 1K32_A

Probab=97.31  E-value=0.002  Score=48.28  Aligned_cols=69  Identities=22%  Similarity=0.417  Sum_probs=44.9

Q ss_pred             CCCeEEeccCCCCcEEEEEecCC--------ChhhhcCC-CCCCCeEEEECCEecCCCChHHHHHHHHc-CCCeEEEEEE
Q psy14174        146 PLGATIKTDEESGKIVVARVMHG--------GAADRSGL-IHVGDEVCEVNGINVEGKTPGDVLKILQS-SEGTITFKLI  215 (269)
Q Consensus       146 ~lG~ti~~~~~~~~i~V~~V~~g--------g~A~r~Gl-L~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~l~v~  215 (269)
                      .||.-+...  .+++.|++|.+|        ||-.+.|. +++||.|++|||+++...  .....+|.+ ++..|.|+|.
T Consensus         2 ~LGAd~~~~--~~~y~I~~I~~gd~~~~~~~sPL~~pGv~v~~GD~I~aInG~~v~~~--~~~~~lL~~~agk~V~Ltv~   77 (88)
T PF14685_consen    2 LLGADFSYD--NGGYRIARIYPGDPWNPNARSPLAQPGVDVREGDYILAINGQPVTAD--ANPYRLLEGKAGKQVLLTVN   77 (88)
T ss_dssp             B-SEEEEEE--TTEEEEEEE-BS-TTSSS-B-GGGGGS----TT-EEEEETTEE-BTT--B-HHHHHHTTTTSEEEEEEE
T ss_pred             ccceEEEEc--CCEEEEEEEeCCCCCCccccCCccCCCCCCCCCCEEEEECCEECCCC--CCHHHHhcccCCCEEEEEEe
Confidence            467777766  468889999987        56566652 469999999999999643  245666654 6778999998


Q ss_pred             eCC
Q psy14174        216 PAD  218 (269)
Q Consensus       216 p~~  218 (269)
                      +..
T Consensus        78 ~~~   80 (88)
T PF14685_consen   78 RKP   80 (88)
T ss_dssp             -ST
T ss_pred             cCC
Confidence            854

>TIGR03279 cyano_FeS_chp putative FeS-containing Cyanobacterial-specific oxidoreductase

Probab=97.24  E-value=0.001  Score=63.35  Aligned_cols=50  Identities=18%  Similarity=0.383  Sum_probs=40.6

Q ss_pred             EEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEe
Q psy14174        162 VARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIP  216 (269)
Q Consensus       162 V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p  216 (269)
                      |..|.+||+|+++| |++||+|++|||..+.  +..++...+.  +..+.+++.+
T Consensus         2 I~~V~pgSpAe~AG-Le~GD~IlsING~~V~--Dw~D~~~~l~--~e~l~L~V~~   51 (433)
T TIGR03279         2 ISAVLPGSIAEELG-FEPGDALVSINGVAPR--DLIDYQFLCA--DEELELEVLD   51 (433)
T ss_pred             cCCcCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHhc--CCcEEEEEEc
Confidence            67789999999999 6999999999999995  4556666663  4668888863

Members of this protein family are predicted FeS-containing oxidoreductases of unknown function, apparently restricted to and universal across the Cyanobacteria. The high trusted cutoff score for this model, 700 bits, excludes homologs from other lineages. This exclusion seems justified because a significant number of sequence positions are simultaneously unique to and invariant across the Cyanobacteria, suggesting a specialized, conserved function, perhaps related to photosynthesis. A distantly related protein family, TIGR03278, in universal in and restricted to archaeal methanogens, and may be linked to methanogenesis.

>KOG0606|consensus

Probab=97.22  E-value=0.00098  Score=69.08  Aligned_cols=80  Identities=25%  Similarity=0.390  Sum_probs=67.8

Q ss_pred             EEEeeCCCCCCeEEeccC---CCCc-----EEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        138 VQLVKSNEPLGATIKTDE---ESGK-----IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       138 V~l~k~~~~lG~ti~~~~---~~~~-----i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      +.+++++..|||+++.-.   +...     -.|..|..|+||..+| ++.||-|+.|||..+.+..|.++++++-+.+..
T Consensus       630 I~i~~~~~~yGft~~airVy~Gd~d~ytvhh~v~sv~egsPA~~ag-ls~~DlIthvnge~v~gl~H~ev~~Lll~~gn~  708 (1205)
T KOG0606|consen  630 ITIHFSGKKYGFTLRAIRVYMGDKDVYTVHHSVGSVEEGSPAFEAG-LSAGDLITHVNGEPVHGLVHTEVMELLLKSGNK  708 (1205)
T ss_pred             eeeeccccccCceeeeEEEecCCcccceeeeeeeeecCCCCccccC-CCccceeEeccCcccchhhHHHHHHHHHhcCCe
Confidence            678889999999875431   1122     3478899999999999 599999999999999999999999999999999


Q ss_pred             EEEEEEeCC
Q psy14174        210 ITFKLIPAD  218 (269)
Q Consensus       210 v~l~v~p~~  218 (269)
                      +++.+.+.+
T Consensus       709 v~~~ttple  717 (1205)
T KOG0606|consen  709 VTLRTTPLE  717 (1205)
T ss_pred             eEEEeeccc
Confidence            999988764

>KOG2199|consensus

Probab=97.21  E-value=0.00015  Score=67.36  Aligned_cols=37  Identities=41%  Similarity=0.787  Sum_probs=33.4

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....|||++|+...+       +..|+|++|||++|++..|+||
T Consensus       214 ~~rkVRALYDFeAaE-------~nELsFkaGdIItVLd~s~~~W  250 (462)
T KOG2199|consen  214 VVRKVRALYDFEAAE-------DNELSFKAGDIITVLDDSDPNW  250 (462)
T ss_pred             cchhhhhhhcccccC-------CCccceecCcEEEEcccCCcch
Confidence            345799999999888       5679999999999999999999

>TIGR02860 spore_IV_B stage IV sporulation protein B

Probab=97.16  E-value=0.0022  Score=60.77  Aligned_cols=71  Identities=15%  Similarity=0.429  Sum_probs=53.8

Q ss_pred             eeCCCCCCeEEeccCCCCcEEEEEe--------cCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC-CCeEE
Q psy14174        141 VKSNEPLGATIKTDEESGKIVVARV--------MHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-EGTIT  211 (269)
Q Consensus       141 ~k~~~~lG~ti~~~~~~~~i~V~~V--------~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~-~~~v~  211 (269)
                      .-+|.++|+.+...    |++|...        ..++||+++| |++||+|++|||.++.  +.+++.++++.. +..+.
T Consensus        92 ~pgG~~iGI~l~t~----GVlVvg~~~v~~~~g~~~SPAa~AG-Lq~GDiIvsING~~V~--s~~DL~~iL~~~~g~~V~  164 (402)
T TIGR02860        92 IPGGQSIGVKLNTK----GVLVVGFSDIETEKGKIHSPGEEAG-IQIGDRILKINGEKIK--NMDDLANLINKAGGEKLT  164 (402)
T ss_pred             EECCEEEEEEEecC----EEEEEEEEcccccCCCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCeEE
Confidence            33677788877653    6776433        2368999999 6999999999999995  567888888765 56788


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      +++.+..
T Consensus       165 LtV~R~G  171 (402)
T TIGR02860       165 LTIERGG  171 (402)
T ss_pred             EEEEECC
Confidence            8888764

SpoIVB, the stage IV sporulation protein B of endospore-forming bacteria such as Bacillus subtilis, is a serine proteinase, expressed in the spore (rather than mother cell) compartment, that participates in a proteolytic activation cascade for Sigma-K. It appears to be universal among endospore-forming bacteria and occurs nowhere else.

>KOG1118|consensus

Probab=97.07  E-value=0.0003  Score=63.42  Aligned_cols=39  Identities=26%  Similarity=0.620  Sum_probs=35.6

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ......+||+||++|+.       |..|.|+.|||+.++++-|+||
T Consensus       303 ~~~~p~cralYdFepen-------EgEL~fkeGDlI~l~~QIdenW  341 (366)
T KOG1118|consen  303 QMDQPCCRALYDFEPEN-------EGELDFKEGDLITLTNQIDENW  341 (366)
T ss_pred             cccchhheeeeccCCCC-------CCccCcccCceeeehhhcCcch
Confidence            34567899999999999       8889999999999999999999

>PF04495 GRASP55_65: GRASP55/65 PDZ-like domain ; InterPro: IPR007583 GRASP55 (Golgi reassembly stacking protein of 55 kDa) and GRASP65 (a 65 kDa) protein are highly homologous

Probab=96.98  E-value=0.015  Score=47.17  Aligned_cols=82  Identities=17%  Similarity=0.295  Sum_probs=56.3

Q ss_pred             CceEEEEEee-----CCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCC-CCeEEEECCEecCCCChHHHHHH
Q psy14174        133 ETVKIVQLVK-----SNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHV-GDEVCEVNGINVEGKTPGDVLKI  202 (269)
Q Consensus       133 ~~~r~V~l~k-----~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~-GD~Il~VNG~~v~~~~~~~~~~~  202 (269)
                      ...|.|.+.-     +.+.||++++-...    ..++-|.+|.++|||+++|+ .+ .|.|+.+++..+.+  .+++.+.
T Consensus         9 ~~~R~v~i~ps~~w~~~g~LG~sv~~~~~~~~~~~~~~Vl~V~p~SPA~~AGL-~p~~DyIig~~~~~l~~--~~~l~~~   85 (138)
T PF04495_consen    9 QTTREVSIVPSKKWGGQGLLGISVRFESFEGAEEEGWHVLRVAPNSPAAKAGL-EPFFDYIIGIDGGLLDD--EDDLFEL   85 (138)
T ss_dssp             SSEEEEEE---SSSSSSSSS-EEEEEEE-TTGCCCEEEEEEE-TTSHHHHTT---TTTEEEEEETTCE--S--TCHHHHH
T ss_pred             CeEEEEEEccCcccCCCCCCcEEEEEecccccccceEEEeEecCCCHHHHCCc-cccccEEEEccceecCC--HHHHHHH
Confidence            4567777753     35679999987532    34788999999999999995 66 79999999988874  4577778


Q ss_pred             HHc-CCCeEEEEEEeC
Q psy14174        203 LQS-SEGTITFKLIPA  217 (269)
Q Consensus       203 l~~-~~~~v~l~v~p~  217 (269)
                      ++. .+..+.|.|-.+
T Consensus        86 v~~~~~~~l~L~Vyns  101 (138)
T PF04495_consen   86 VEANENKPLQLYVYNS  101 (138)
T ss_dssp             HHHTTTS-EEEEEEET
T ss_pred             HHHcCCCcEEEEEEEC
Confidence            765 467788888764

GRASP55 is a component of the Golgi stacking machinery. GRASP65, an N-ethylmaleimide-sensitive membrane protein required for the stacking of Golgi cisternae in a cell-free system [].; PDB: 3RLE_A 4EDJ_A.

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=96.92  E-value=0.00066  Score=45.07  Aligned_cols=31  Identities=42%  Similarity=0.841  Sum_probs=24.8

Q ss_pred             eecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        232 AHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       232 a~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      |+++|.+..       +..|+|++||+|.|+.+.+..|
T Consensus         1 Al~~y~~~~-------~dELs~~~Gd~i~v~~~~~~~W   31 (49)
T PF14604_consen    1 ALYDYEAQD-------PDELSFKKGDVITVLEKSDDGW   31 (49)
T ss_dssp             ESSCBCSSS-------TTB-EB-TTEEEEEEEESSTSE
T ss_pred             CCccCCCCC-------cCEeeEcCCCEEEEEEeCCCCE
Confidence            578888877       4579999999999999988888

...

>KOG1738|consensus

Probab=96.88  E-value=0.0014  Score=64.33  Aligned_cols=73  Identities=27%  Similarity=0.327  Sum_probs=63.9

Q ss_pred             eCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEE
Q psy14174        142 KSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLI  215 (269)
Q Consensus       142 k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~  215 (269)
                      |.++++|+.|...- ++..+|+.+.+++||++.+.|+.||+++.||+..+.|+.+..++..++....-|.++|.
T Consensus       210 kp~eglg~~I~Ssy-dg~h~~s~~~e~Spad~~~kI~dgdEv~qiN~qtvVgwqlk~vV~sL~~~~sgi~l~lk  282 (638)
T KOG1738|consen  210 SPSEGLGLYIDSSY-DGPHVTSKIFEQSPADYRQKILDGDEVLQINEQTVVGWQLKVVVSSLRETPAGIELTLK  282 (638)
T ss_pred             CcccCCceEEeeec-CCceeccccccCChHHHhhcccCccceeeecccccccchhHhHHhhcccCcccceeeee
Confidence            57889999998763 35788999999999999999999999999999999999999999999887666666654

>COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only]

Probab=96.76  E-value=0.002  Score=62.15  Aligned_cols=73  Identities=23%  Similarity=0.395  Sum_probs=50.9

Q ss_pred             eEEEEEeeCCC--CCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        135 VKIVQLVKSNE--PLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       135 ~r~V~l~k~~~--~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      +..+...|..+  .||+.+...  ++...|+.|.+||||+++| |.+||.|+.|||.+-.-..        -+++..+.+
T Consensus       439 ~gL~~~~~~~~~~~LGl~v~~~--~g~~~i~~V~~~gPA~~AG-l~~Gd~ivai~G~s~~l~~--------~~~~d~i~v  507 (558)
T COG3975         439 FGLTFTPKPREAYYLGLKVKSE--GGHEKITFVFPGGPAYKAG-LSPGDKIVAINGISDQLDR--------YKVNDKIQV  507 (558)
T ss_pred             cceEEEecCCCCcccceEeccc--CCeeEEEecCCCChhHhcc-CCCccEEEEEcCccccccc--------cccccceEE
Confidence            44444455444  678777665  6789999999999999999 6999999999999221111        134556666


Q ss_pred             EEEeCC
Q psy14174        213 KLIPAD  218 (269)
Q Consensus       213 ~v~p~~  218 (269)
                      .+.+.+
T Consensus       508 ~~~~~~  513 (558)
T COG3975         508 HVFREG  513 (558)
T ss_pred             EEccCC
Confidence            665543

>KOG4792|consensus

Probab=96.67  E-value=0.00099  Score=57.83  Aligned_cols=38  Identities=34%  Similarity=0.720  Sum_probs=33.4

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....|||++||+.+..       +-.|+|++||||.|+++....|
T Consensus       122 ~~~~~vr~~fdF~G~d-------eeDLPFkkGeiL~I~~K~eeqW  159 (293)
T KOG4792|consen  122 EEAEYVRALFDFNGND-------EEDLPFKKGEILRIRDKPEEQW  159 (293)
T ss_pred             hhhhheeeeeccCCCc-------cccCCcccCcEEEEecCcHHHh
Confidence            3468999999999987       6789999999999999887777

>smart00326 SH3 Src homology 3 domains

Probab=96.65  E-value=0.003  Score=41.87  Aligned_cols=35  Identities=46%  Similarity=0.794  Sum_probs=30.0

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|+++|.+..       ...|+|++||++.|+.+.+..|
T Consensus         3 ~~~~a~~~~~~~~-------~~~l~~~~Gd~v~v~~~~~~~w   37 (58)
T smart00326        3 PQVRALYDYTAQD-------PDELSFKKGDIITVLEKSDDGW   37 (58)
T ss_pred             cEEEEeeeeCCCC-------CCCCCCCCCCEEEEEEcCCCCe
Confidence            4678999999855       5579999999999999988878

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=96.49  E-value=0.0042  Score=40.65  Aligned_cols=34  Identities=50%  Similarity=0.859  Sum_probs=28.7

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +++|+++|.+..       ...|+|++||++.|+...+..|
T Consensus         1 ~~~a~~~~~~~~-------~~~l~~~~Gd~v~v~~~~~~~w   34 (54)
T cd00174           1 YVRALYDYDARD-------PDELSFKKGDIIEVLEKSDDGW   34 (54)
T ss_pred             CEEEEEeeCCCC-------CCCCCCCCCCEEEEEEcCCCCe
Confidence            357899999887       4589999999999999877777

>PF09045 L27_2: L27_2; InterPro: IPR015132 The L27_2 domain is a protein-protein interaction domain capable of organising scaffold proteins into supramolecular assemblies by formation of heteromeric L27_2 domain complexes

Probab=96.22  E-value=0.0053  Score=41.88  Aligned_cols=46  Identities=26%  Similarity=0.384  Sum_probs=36.5

Q ss_pred             HHHHHHHHHhhccc-----ccChhhHHHHHHHhcChhHHHHHhhhhccccc
Q psy14174         14 SSLLETLQESQSTF-----SANDEELLFLSSLLQSKELNALVHVHNSIVNE   59 (269)
Q Consensus        14 ~~vL~~L~~~~~~~-----~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~~   59 (269)
                      +++|..|++++...     ....+.+..|+.+|+||.|+.++.++.+|.+.
T Consensus         3 ~~al~~lerlq~KL~~rGd~s~~e~L~~l~~~LqSPLF~~iL~LQqSi~qL   53 (58)
T PF09045_consen    3 QRALQALERLQAKLKERGDTSHSEKLSLLKDTLQSPLFNQILTLQQSIKQL   53 (58)
T ss_dssp             CHHHHHHHHHHHHHHHCT--TTHHHHHHHHHHHH-HHHHHHHHHHHHHCCC
T ss_pred             hHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence            36777777776664     34578899999999999999999999999875

L27_2 domain-mediated protein assemblies have been shown to play essential roles in cellular processes including asymmetric cell division, establishment and maintenance of cell polarity, and clustering of receptors and ion channels. Members of this family form specific heterotetrameric complexes, in which each domain contains three alpha-helices. The two N-terminal helices of each L27_2 domain pack together to form a tight, four-helix bundle in the heterodimer, whilst the third helix of each L27_2 domain forms another four-helix bundle that assembles the two units of the heterodimer into a tetramer []. ; PDB: 3UIT_A 1VF6_B.

>KOG3129|consensus

Probab=96.17  E-value=0.014  Score=50.13  Aligned_cols=59  Identities=24%  Similarity=0.410  Sum_probs=43.8

Q ss_pred             cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCC-hHHHHHHHHcC-CCeEEEEEEeCC
Q psy14174        159 KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT-PGDVLKILQSS-EGTITFKLIPAD  218 (269)
Q Consensus       159 ~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~-~~~~~~~l~~~-~~~v~l~v~p~~  218 (269)
                      -++|..|.++|||+++| |++||+|+++..+.-.+.. ..++....+.. +..+.+++.+.+
T Consensus       140 Fa~V~sV~~~SPA~~aG-l~~gD~il~fGnV~sgn~~~lq~i~~~v~~~e~~~v~v~v~R~g  200 (231)
T KOG3129|consen  140 FAVVDSVVPGSPADEAG-LCVGDEILKFGNVHSGNFLPLQNIAAVVQSNEDQIVSVTVIREG  200 (231)
T ss_pred             eEEEeecCCCChhhhhC-cccCceEEEecccccccchhHHHHHHHHHhccCcceeEEEecCC
Confidence            47799999999999999 6999999998777665543 44444444444 455678887754

>COG0265 DegQ Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]

Probab=96.15  E-value=0.019  Score=53.39  Aligned_cols=58  Identities=29%  Similarity=0.476  Sum_probs=47.3

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|..|.++|||+++| ++.||.|+++||.++.+  ..+....+..  .+..+.+++.+..
T Consensus       270 ~G~~V~~v~~~spa~~ag-i~~Gdii~~vng~~v~~--~~~l~~~v~~~~~g~~v~~~~~r~g  329 (347)
T COG0265         270 AGAVVLGVLPGSPAAKAG-IKAGDIITAVNGKPVAS--LSDLVAAVASNRPGDEVALKLLRGG  329 (347)
T ss_pred             CceEEEecCCCChHHHcC-CCCCCEEEEECCEEccC--HHHHHHHHhccCCCCEEEEEEEECC
Confidence            468999999999999999 69999999999999954  4455555543  4678899998853

>KOG1029|consensus

Probab=95.65  E-value=0.009  Score=59.96  Aligned_cols=35  Identities=46%  Similarity=0.887  Sum_probs=31.5

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .-|-|++||....       +..|+|++|||+.|+|++|+.|
T Consensus      1054 ~qviamYdY~Aqn-------dDELsF~kgdiI~VlnkdepeW 1088 (1118)
T KOG1029|consen 1054 CQVIAMYDYEAQN-------DDELSFKKGDIINVLNKDEPEW 1088 (1118)
T ss_pred             ceeEEeeccccCC-------cccccccCCCEEEecCCCChhh
Confidence            4577999999887       5579999999999999999999

>PRK09681 putative type II secretion protein GspC; Provisional

Probab=95.48  E-value=0.1  Score=47.20  Aligned_cols=54  Identities=19%  Similarity=0.314  Sum_probs=40.1

Q ss_pred             EEEecCCChh---hhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCeEEEEEEeCC
Q psy14174        162 VARVMHGGAA---DRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGTITFKLIPAD  218 (269)
Q Consensus       162 V~~V~~gg~A---~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~v~l~v~p~~  218 (269)
                      =-++.||+.+   .+.| |+.||.+++|||.++.  ..+++.+++++.  ...++|+|.+.+
T Consensus       208 GYrl~Pgkd~~lF~~~G-Lq~GDva~sING~dL~--D~~qa~~l~~~L~~~tei~ltVeRdG  266 (276)
T PRK09681        208 GYAVKPGADRSLFDASG-FKEGDIAIALNQQDFT--DPRAMIALMRQLPSMDSIQLTVLRKG  266 (276)
T ss_pred             EEEECCCCcHHHHHHcC-CCCCCEEEEeCCeeCC--CHHHHHHHHHHhccCCeEEEEEEECC
Confidence            3455555433   6678 6999999999999996  455667777653  477899999976

>COG3031 PulC Type II secretory pathway, component PulC [Intracellular trafficking and secretion]

Probab=95.34  E-value=0.092  Score=46.22  Aligned_cols=79  Identities=19%  Similarity=0.438  Sum_probs=56.1

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCeEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~v~  211 (269)
                      .+|..-+.|++.-+|+.+..++           .++.-+.+| |+.||..++||+.+++  +++++..+++..  ...+.
T Consensus       194 yIrltpv~r~eki~Gyr~~pgk-----------d~slF~~sg-lq~GDIavaiNnldlt--dp~~m~~llq~l~~m~s~q  259 (275)
T COG3031         194 YIRLTPVIRNEKIEGYRFEPGK-----------DGSLFYKSG-LQRGDIAVAINNLDLT--DPEDMFRLLQMLRNMPSLQ  259 (275)
T ss_pred             heEeeeEeeCCceEEEEecCCC-----------Ccchhhhhc-CCCcceEEEecCcccC--CHHHHHHHHHhhhcCcceE
Confidence            3555555567777777777764           345667889 6999999999999994  566777777653  46788


Q ss_pred             EEEEeCCCcCcccccceeee
Q psy14174        212 FKLIPADNKLGYRESKIRVR  231 (269)
Q Consensus       212 l~v~p~~~~~~~~~~~~~vR  231 (269)
                      |+|.+.+     ....++|+
T Consensus       260 lTv~R~G-----~rhdInV~  274 (275)
T COG3031         260 LTVIRRG-----KRHDINVR  274 (275)
T ss_pred             EEEEecC-----ccceeeec
Confidence            9998876     44445543

>KOG4225|consensus

Probab=95.31  E-value=0.013  Score=55.45  Aligned_cols=34  Identities=41%  Similarity=0.787  Sum_probs=31.1

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      --||+|+|.+..       .-.|+|++|||+.|.-+-|.||
T Consensus       232 ~aralf~F~~qt-------~kEL~~~kGDIVyI~rkvD~nW  265 (489)
T KOG4225|consen  232 AARALFDFEAQT-------PKELPFNKGDIVYILRKVDQNW  265 (489)
T ss_pred             hhhheeccccCC-------ccccccCCCCEEEEEeeccCce
Confidence            378999999987       5579999999999999999999

>KOG3532|consensus

Probab=95.25  E-value=0.065  Score=53.46  Aligned_cols=74  Identities=19%  Similarity=0.362  Sum_probs=59.9

Q ss_pred             Eee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeC
Q psy14174        140 LVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPA  217 (269)
Q Consensus       140 l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~  217 (269)
                      +.+ .+.++|+.+.... +..+-|-.|.+.++|.++. +.+||++++|||+++  .+..++...++...+.++..+.+.
T Consensus       380 ~~~~~s~~ig~vf~~~~-~~~v~v~tv~~ns~a~k~~-~~~gdvlvai~~~pi--~s~~q~~~~~~s~~~~~~~l~~~~  454 (1051)
T KOG3532|consen  380 SRYDVSSPIGLVFDKNT-NRAVKVCTVEDNSLADKAA-FKPGDVLVAINNVPI--RSERQATRFLQSTTGDLTVLVERS  454 (1051)
T ss_pred             ccccccCceeEEEecCC-ceEEEEEEecCCChhhHhc-CCCcceEEEecCccc--hhHHHHHHHHHhcccceEEEEeec
Confidence            344 5667888776542 3467799999999999999 589999999999999  567899999999988887776553

>KOG3601|consensus

Probab=95.11  E-value=0.0083  Score=51.63  Aligned_cols=104  Identities=16%  Similarity=0.279  Sum_probs=64.3

Q ss_pred             cEEEEEecCCChhhhcCCCCCCCeEEEECCE-ecCCCCh---------HHHHHHHHcC--CCeEEEEEEeCC---CcCcc
Q psy14174        159 KIVVARVMHGGAADRSGLIHVGDEVCEVNGI-NVEGKTP---------GDVLKILQSS--EGTITFKLIPAD---NKLGY  223 (269)
Q Consensus       159 ~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~-~v~~~~~---------~~~~~~l~~~--~~~v~l~v~p~~---~~~~~  223 (269)
                      |-++.++..-+|-+-+|..+-+|.|...+++ +-.+...         ++.+..-+..  ..+....+....   .....
T Consensus        80 G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~~lw~skfnslnplv~Y~rt~s~~r~~qi~l~d~~~~~~~~~~  159 (222)
T KOG3601|consen   80 GDFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFGKYFLWSSKFNSLNPLVSYHRTASQSRNQQIFLRDMEPPPAPLPP  159 (222)
T ss_pred             chhhhhhhhcCcccccccccCCCCceeccccccCccccccchhhccCCCCCcccCcccccccceeeeecccccccccCCC
Confidence            5667777777888888888888888877776 2222211         1111111111  111111111111   11233


Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....|++|+|++.|..       ...+.|++||+.+|++++|++|
T Consensus       160 ~~~~~yqQa~~df~~~p-------p~ql~f~~gq~~~v~~~ss~~w  198 (222)
T KOG3601|consen  160 APTNYYQQALYDFQPQP-------PGQLAFRRGQQIQVLDSSSPFW  198 (222)
T ss_pred             CccchhhhhcCCCCCCC-------chhhccccCCcceeecCCCcch
Confidence            46678999999988766       4468999999999999999999

>COG3480 SdrC Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms]

Probab=94.34  E-value=0.28  Score=44.95  Aligned_cols=56  Identities=16%  Similarity=0.325  Sum_probs=48.1

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPA  217 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~  217 (269)
                      .|+|+..+..++++.  |.|+.||.|.+|||.++  .+.++....+++  .|..|+++..+.
T Consensus       130 ~gvyv~~v~~~~~~~--gkl~~gD~i~avdg~~f--~s~~e~i~~v~~~k~Gd~VtI~~~r~  187 (342)
T COG3480         130 AGVYVLSVIDNSPFK--GKLEAGDTIIAVDGEPF--TSSDELIDYVSSKKPGDEVTIDYERH  187 (342)
T ss_pred             eeEEEEEccCCcchh--ceeccCCeEEeeCCeec--CCHHHHHHHHhccCCCCeEEEEEEec
Confidence            489999999999974  77899999999999999  466788888865  689999999864

>KOG4225|consensus

Probab=94.26  E-value=0.036  Score=52.45  Aligned_cols=36  Identities=28%  Similarity=0.643  Sum_probs=32.8

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+.+||+|.|.|+.       +..|.|+.|||+.|+.+.|+.|
T Consensus       432 ~l~yrAly~Y~pqn-------edeLEl~egDii~VmeKcddgW  467 (489)
T KOG4225|consen  432 PLKYRALYSYRPQN-------EDELELREGDIIDVMEKCDDGW  467 (489)
T ss_pred             cccceeccccCCCC-------chhheeccCCEEeeeecccCcc
Confidence            35589999999988       7789999999999999999999

>KOG1320|consensus

Probab=94.18  E-value=0.18  Score=48.82  Aligned_cols=56  Identities=20%  Similarity=0.372  Sum_probs=46.0

Q ss_pred             cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC--CeEEEEEEeC
Q psy14174        159 KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE--GTITFKLIPA  217 (269)
Q Consensus       159 ~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~--~~v~l~v~p~  217 (269)
                      +++|+.|.+|+++...+ +..||+|..|||++|.+.  .++..+++.+.  ++|.+...+.
T Consensus       399 ~v~is~Vlp~~~~~~~~-~~~g~~V~~vng~~V~n~--~~l~~~i~~~~~~~~v~vl~~~~  456 (473)
T KOG1320|consen  399 LVLVSQVLPGSINGGYG-LKPGDQVVKVNGKPVKNL--KHLYELIEECSTEDKVAVLDRRS  456 (473)
T ss_pred             EEEEEEeccCCCccccc-ccCCCEEEEECCEEeech--HHHHHHHHhcCcCceEEEEEecC
Confidence            68899999999999999 599999999999999765  46788887665  4666666654

>KOG4407|consensus

Probab=92.18  E-value=0.15  Score=54.28  Aligned_cols=82  Identities=17%  Similarity=0.109  Sum_probs=63.4

Q ss_pred             eEEEEEeeCCCCCCeEEecc-----C---------------------CCCcEEEEEecCCChhhhcCCCCCCCeEEEECC
Q psy14174        135 VKIVQLVKSNEPLGATIKTD-----E---------------------ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG  188 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~-----~---------------------~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG  188 (269)
                      .++|.+.|.+.||||+++-.     +                     -..-+++..+..++++..+| +..||.|..|||
T Consensus        47 ~~~V~~rR~nQGFGFTLRHFIaYPPEd~~a~Ss~sG~~~Gsa~~~~~~~~s~~~~Q~~s~~~~~nsG-~~s~~~v~~itG  125 (1973)
T KOG4407|consen   47 KLIVIRRRPNQGFGFTLRHFIAYPPEDDQASSSASGLVSGSATAATAASVSTNWPQEASSAAGSNSG-SSSSVGVAGITG  125 (1973)
T ss_pred             ceEEEEecCCCCcceeeeeeeecCchhhhhhhhhccccccchhcccccccccccchhcccCcccccC-cccccceeeecc
Confidence            36677777999999999763     0                     01145677889999999999 599999999999


Q ss_pred             EecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        189 INVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       189 ~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      ..+.+.+ ......++.......+.|.+.+
T Consensus       126 ~e~~~~T-S~~~~~vk~~eT~~~~eV~~n~  154 (1973)
T KOG4407|consen  126 LEPTSPT-SLPPYQVKAMETIFIKEVQANG  154 (1973)
T ss_pred             cccCCCc-cccHHHHhhhhhhhhhhhccCC
Confidence            9999888 6666667666666677777654

>KOG1421|consensus

Probab=91.44  E-value=0.65  Score=46.69  Aligned_cols=57  Identities=21%  Similarity=0.351  Sum_probs=46.0

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHH-cCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQ-SSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~-~~~~~v~l~v~p~~  218 (269)
                      +-++|..|.++|+|++.  |.+||.++.||+..+.  ...++.++|- ..+..+.|+|.+.+
T Consensus       303 gmLvV~~vL~~gpa~k~--Le~GDillavN~t~l~--df~~l~~iLDegvgk~l~LtI~Rgg  360 (955)
T KOG1421|consen  303 GMLVVETVLPEGPAEKK--LEPGDILLAVNSTCLN--DFEALEQILDEGVGKNLELTIQRGG  360 (955)
T ss_pred             eeEEEEEeccCCchhhc--cCCCcEEEEEcceehH--HHHHHHHHHhhccCceEEEEEEeCC
Confidence            45778999999999874  7999999999987773  4556667774 46888999999875

>KOG4371|consensus

Probab=91.16  E-value=0.43  Score=49.84  Aligned_cols=80  Identities=29%  Similarity=0.443  Sum_probs=65.4

Q ss_pred             eEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      +..+.+-|+...||..+..-  .+.+.|+.....+...+-. |++||.++-+||+-+.+.-|.+++.+++..+..|.+.|
T Consensus      1148 ~i~~~~~r~~~~l~~~~a~~--~~~~~~~~~~~~~~~~~pd-~~~g~~l~~~n~i~~~~~~~~~~~~~~~~~~~~~~~~~ 1224 (1332)
T KOG4371|consen 1148 VIDVELDRNEGSLGVQIASL--SGRVCIKQLTSEPAISHPD-IRVGDVLLYVNGIAVEGKVHQEVVAMLRGGGDRVVLGV 1224 (1332)
T ss_pred             cccccCCCCCCCCCceeccC--ccceehhhcccCCCCCCCC-cchhhhhhhccceeeechhhHHHHHHHhccCceEEEEe
Confidence            44456667668899988765  4466677777666666666 79999999999999999999999999999999999998


Q ss_pred             EeC
Q psy14174        215 IPA  217 (269)
Q Consensus       215 ~p~  217 (269)
                      .+.
T Consensus      1225 ~r~ 1227 (1332)
T KOG4371|consen 1225 QRP 1227 (1332)
T ss_pred             ecC
Confidence            764

>PF12812 PDZ_1: PDZ-like domain

Probab=91.09  E-value=0.72  Score=33.63  Aligned_cols=47  Identities=26%  Similarity=0.245  Sum_probs=36.9

Q ss_pred             cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        159 KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       159 ~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ++++.....|+++...| +..|-.|.+|||+++  .+.++.++.+++..+
T Consensus        31 ~gv~v~~~~g~~~~~~~-i~~g~iI~~Vn~kpt--~~Ld~f~~vvk~ipd   77 (78)
T PF12812_consen   31 GGVYVAVSGGSLAFAGG-ISKGFIITSVNGKPT--PDLDDFIKVVKKIPD   77 (78)
T ss_pred             CEEEEEecCCChhhhCC-CCCCeEEEeECCcCC--cCHHHHHHHHHhCCC
Confidence            34455557888888777 799999999999999  466788888887653

>KOG4371|consensus

Probab=90.31  E-value=0.35  Score=50.53  Aligned_cols=82  Identities=26%  Similarity=0.450  Sum_probs=66.8

Q ss_pred             eEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      .+.|.+.| ...++|+.+......++++|..+...+.|..-|.+++||++...+|.++.+.++.+....++-..+.+.++
T Consensus      1246 l~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~a~~~~~~r~g~~~~~~~~~~~~~~~p~~~l~~~~~v~~p~~~~ 1325 (1332)
T KOG4371|consen 1246 LISVMLLKKPMATLGLSLAKRTMSDGIFIRNIAQDSAASSEGTLRVGDRLVSLDGEPVDGFTPATILEKLKLVQGPVQIT 1325 (1332)
T ss_pred             hhhheeeecccccccccccccCcCCceeeecccccccccccccccccceeeccCCccCCCCChHHHHHHhhhccCchhhe
Confidence            34445555 77789998877666789999999999999999999999999999999999999888888777556666666


Q ss_pred             EEe
Q psy14174        214 LIP  216 (269)
Q Consensus       214 v~p  216 (269)
                      +.+
T Consensus      1326 ~~~ 1328 (1332)
T KOG4371|consen 1326 VTR 1328 (1332)
T ss_pred             ehh
Confidence            544

>KOG4226|consensus

Probab=89.92  E-value=0.23  Score=44.57  Aligned_cols=33  Identities=39%  Similarity=0.779  Sum_probs=27.7

Q ss_pred             eeeecccCCCCCCCCCCCCCccccCCCCEEEEEe--CCCCCC
Q psy14174        230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVS--QDDAYW  269 (269)
Q Consensus       230 vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~--~~d~~W  269 (269)
                      |-|++.++...       +..|+|.+||.|.||+  ..||.|
T Consensus       194 VvaLYsFsssn-------deELsFeKGerleivd~Pe~DPdW  228 (379)
T KOG4226|consen  194 VVALYSFSSSN-------DEELSFEKGERLEIVDKPENDPDW  228 (379)
T ss_pred             EEEEecccCCC-------hhhcccccCceeEeccCCCCCchH
Confidence            56788888777       4579999999999998  678888

>KOG2856|consensus

Probab=88.68  E-value=0.18  Score=47.00  Aligned_cols=33  Identities=39%  Similarity=0.703  Sum_probs=28.6

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDA  267 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~  267 (269)
                      +.|||++||.+.+       ...|+|+.||.|..+...|.
T Consensus       415 v~vraLYDY~gqE-------~DElsfkaGd~l~kl~eeDe  447 (472)
T KOG2856|consen  415 VRVRALYDYAGQE-------GDELSFKAGDELEKLEEEDE  447 (472)
T ss_pred             eeEEeeeccCccc-------ccchhhccccHhhhcCCccc
Confidence            7899999999987       45799999999999976663

>KOG3632|consensus

Probab=86.11  E-value=0.68  Score=48.21  Aligned_cols=35  Identities=40%  Similarity=0.681  Sum_probs=26.9

Q ss_pred             eeeecccCCCCCCCCCCCCCc---cccCCCCEEEEEeCCC
Q psy14174        230 VRAHFDYDASSDPYIPCKDAG---LSFNKGDILHVVSQDD  266 (269)
Q Consensus       230 vRa~fdy~p~~D~~ipc~e~g---L~F~~GDIL~vv~~~d  266 (269)
                      +-|+|||||-.  +-|..+|+   |+|+.|+||.|....|
T Consensus      1141 fVAlfDYDpl~--MSpNpDAaEeELpFregqIikV~GDkD 1178 (1335)
T KOG3632|consen 1141 FVALFDYDPLQ--MSPNPDAAEEELPFREGQIIKVLGDKD 1178 (1335)
T ss_pred             eEeeeccCccc--cCCCCChhhhccccccCcEEEEecccc
Confidence            34999999976  45555554   9999999999996444

>KOG0162|consensus

Probab=85.45  E-value=1  Score=45.71  Aligned_cols=35  Identities=34%  Similarity=0.644  Sum_probs=30.2

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+|+++|.+++       ...|+|++|||+.|+..+-.-|
T Consensus      1052 p~~~A~Y~y~gq~-------~dEls~~~~diIei~~edpSGW 1086 (1106)
T KOG0162|consen 1052 PVCEALYDYPGQD-------VDELSFKKGDIIEIMREDPSGW 1086 (1106)
T ss_pred             cceeeeccCCCCC-------cccccccCCCEEEEeccCCCcc
Confidence            5678999999884       4489999999999999888777

>KOG4407|consensus

Probab=84.80  E-value=0.44  Score=50.90  Aligned_cols=60  Identities=20%  Similarity=0.445  Sum_probs=55.4

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      .-+||..|++.|+|+-+. |+-||+++.||..++.++...+++.++++....+++.+.|..
T Consensus       143 eT~~~~eV~~n~~~~~a~-LQ~~~~V~~v~~q~~A~i~~s~~~S~~~qt~~~~~~~~~P~~  202 (1973)
T KOG4407|consen  143 ETIFIKEVQANGPAHYAN-LQTGDRVLMVNNQPIAGIAYSTIVSMIKQTPAVLTLHVVPKE  202 (1973)
T ss_pred             hhhhhhhhccCChhHHHh-hhccceeEEeecCcccchhhhhhhhhhccCCCCCCceecccc
Confidence            478999999999999999 599999999999999999999999999998888888888863

>KOG3834|consensus

Probab=83.40  E-value=2.2  Score=40.66  Aligned_cols=60  Identities=18%  Similarity=0.315  Sum_probs=51.0

Q ss_pred             CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeC
Q psy14174        157 SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPA  217 (269)
Q Consensus       157 ~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~  217 (269)
                      ..+.-|-+|..+++|+++|+.---|.|++|||..+. ...+....+++.....|++++...
T Consensus        14 teg~hvlkVqedSpa~~aglepffdFIvSI~g~rL~-~dnd~Lk~llk~~sekVkltv~n~   73 (462)
T KOG3834|consen   14 TEGYHVLKVQEDSPAHKAGLEPFFDFIVSINGIRLN-KDNDTLKALLKANSEKVKLTVYNS   73 (462)
T ss_pred             ceeEEEEEeecCChHHhcCcchhhhhhheeCccccc-CchHHHHHHHHhcccceEEEEEec
Confidence            457889999999999999988889999999999995 556788888887777799998764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	269
3o46_A	93	Crystal Structure Of The Pdz Domain Of Mpp7 Length		1e-26
1va8_A	113	Solution Structure Of The Pdz Domain Of Pals1 Prote		3e-16
1kwa_A	88	Human CaskLIN-2 Pdz Domain Length = 88		3e-15
2ev8_A	97	Solution Structure Of The Erythroid P55 Pdz Domain		3e-12
2ejy_A	97	Solution Structure Of The P55 Pdz T85c Domain Compl		1e-11
1n7e_A	97	Crystal Structure Of The Sixth Pdz Domain Of Grip1		1e-07
2e7k_A	91	Solution Structure Of The Pdz Domain From Human Mag		3e-07
1ry4_A	128	Nmr Structure Of The Crib-Pdz Module Of Par-6 Lengt		4e-07
2xkx_A	721	Single Particle Analysis Of Psd-95 In Negative Stai		5e-07
2lc6_A	128	Solution Structure Of Par-6 Q144cL164C Length = 128		6e-07
2dkr_A	93	Solution Structure Of The Pdz Domain From Human Lin		9e-07
1x8s_A	102	Structure Of The Par-6 Pdz Domain With A Pals1 Inte		1e-06
1rzx_A	98	Crystal Structure Of A Par-6 Pdz-Peptide Complex Le		2e-06
2lob_A	112	Pdz Domain Of Cal (Cystic Fibrosis Transmembrane Re		6e-06
1nf3_C	128	Structure Of Cdc42 In A Complex With The Gtpase-Bin		7e-06
4e34_A	87	Crystal Structure Of Cftr Associated Ligand (Cal) P		9e-06
2dc2_A	103	Solution Structure Of Pdz Domain Length = 103		1e-05
3qe1_A	107	Crystal Structure Of Pdz Domain Of Sorting Nexin 27		2e-05
3qdo_A	109	Crystal Structure Of Pdz Domain Of Sorting Nexin 27		2e-05
2eeh_A	100	Solution Structure Of First Pdz Domain Of Pdz Domai		3e-05
3qgl_A	101	Crystal Structure Of Pdz Domain Of Sorting Nexin 27		3e-05
2koj_A	111	Solution Structure Of Mouse Par-3 Pdz2 (Residues 45		4e-05
2ogp_A	97	Solution Structure Of The Second Pdz Domain Of Par-		5e-05
2kom_A	121	Solution Structure Of Humar Par-3b Pdz2 (Residues 4		7e-05
3uat_A	296	Guanylate Kinase Domains Of The Maguk Family Scaffo		1e-04
3hvq_C	170	Crystal Structure Of A Complex Between Protein Phos		1e-04
3tvt_A	292	Structural Basis For Discs Large Interaction With P		3e-04
2dlu_A	111	Solution Structure Of The Second Pdz Domain Of Huma		4e-04
2yuy_A	126	Solution Structure Of Pdz Domain Of Rho Gtpase Acti		4e-04
3pdz_A	96	Solution Structure Of The Pdz2 Domain From Human Ph		6e-04
1d5g_A	96	Solution Structure Of The Pdz2 Domain From Human Ph		6e-04
1uit_A	117	Solution Structure Of Rsgi Ruh-006, The Third Pdz D		6e-04
1uew_A	114	Solution Structure Of The Forth Pdz Domain Of Human		7e-04
2he2_A	102	Crystal Structure Of The 3rd Pdz Domain Of Human Di		8e-04

>pdb|3O46|A Chain A, Crystal Structure Of The Pdz Domain Of Mpp7 Length = 93

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/88 (62%), Positives = 72/88 (81%)
Query: 133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVE 192
           ++VKI++LVK+ EPLGATIK DE++G I+VAR+  GGAADRSGLIHVGDE+ EVNGI VE
Sbjct: 3   DSVKIIRLVKNREPLGATIKKDEQTGAIIVARIXRGGAADRSGLIHVGDELREVNGIPVE 62
Query: 193 GKTPGDVLKILQSSEGTITFKLIPADNK 220
            K P ++++IL  S+G ITFK+IP   +
Sbjct: 63  DKRPEEIIQILAQSQGAITFKIIPGSKE 90

>pdb|1VA8|A Chain A, Solution Structure Of The Pdz Domain Of Pals1 Protein Length = 113

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 133 ETVKIVQLVKSNE-PLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINV 191
           ETVKIV++ K+ + PLGAT++ + +S  ++++R++ GGAA++SGL+H GDEV E+NGI +
Sbjct: 24  ETVKIVRIEKARDIPLGATVRNEMDS--VIISRIVKGGAAEKSGLLHEGDEVLEINGIEI 81
Query: 192 EGKTPGDVLKILQSSEGTITFKLIPADN 219
            GK   +V  +L    GT+TF LIP+  
Sbjct: 82  RGKDVNEVFDLLSDMHGTLTFVLIPSSG 109

>pdb|1KWA|A Chain A, Human CaskLIN-2 Pdz Domain Length = 88

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/91 (43%), Positives = 62/91 (68%), Gaps = 7/91 (7%)
Query: 136 KIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           ++VQ  K ++EP+G T+K +E +   +VAR+MHGG   R G +HVGDE+ E+NGI+V  +
Sbjct: 3   RLVQFQKNTDEPMGITLKMNELN-HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQ 61
Query: 195 TPGDVLKILQSSEGTITFKLIPADNKLGYRE 225
           T   + K+L+   G+ITFK++P+     YRE
Sbjct: 62  TVEQLQKMLREMRGSITFKIVPS-----YRE 87

>pdb|2EV8|A Chain A, Solution Structure Of The Erythroid P55 Pdz Domain Length = 97

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           V+++Q  K + EP+G T+K +E+     VAR++HGG   R G +HVGDE+ E+NG NV  
Sbjct: 13  VRLIQFEKVTEEPMGITLKLNEKQS-CTVARILHGGMIHRQGSLHVGDEILEINGTNVTN 71
Query: 194 KTPGDVLKILQSSEGTITFKLIP 216
            +   + K ++ ++G I+ K+IP
Sbjct: 72  HSVDQLQKAMKETKGMISLKVIP 94

>pdb|2EJY|A Chain A, Solution Structure Of The P55 Pdz T85c Domain Complexed With The Glycophorin C F127c Peptide Length = 97

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           V+++Q  K + EP+G  +K +E+     VAR++HGG   R G +HVGDE+ E+NG NV  
Sbjct: 13  VRLIQFEKVTEEPMGICLKLNEKQS-CTVARILHGGMIHRQGSLHVGDEILEINGTNVTN 71
Query: 194 KTPGDVLKILQSSEGTITFKLIP 216
            +   + K ++ ++G I+ K+IP
Sbjct: 72  HSVDQLQKAMKETKGMISLKVIP 94

>pdb|1N7E|A Chain A, Crystal Structure Of The Sixth Pdz Domain Of Grip1 Length = 97

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 138 VQLVKSNEPLGATIK-TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTP 196
           V+L +   PLG TI  T+E    I+++ +  GG A+R+G IH+GD +  +N  +++GK  
Sbjct: 9   VELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPL 68
Query: 197 GDVLKILQSSEGTITFKL 214
            + + +LQ +  T+T K+
Sbjct: 69  SEAIHLLQMAGETVTLKI 86

>pdb|2E7K|A Chain A, Solution Structure Of The Pdz Domain From Human Maguk P55 Subfamily Member 2 Length = 91

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 143 SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKI 202
           + E LG T +   E G++V+AR++HGG   + GL+HVGD + EVNG  V G  P  + ++
Sbjct: 16  AGEHLGVTFRV--EGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQEL 72
Query: 203 LQSSEGTITFKLIPA 217
           L+++ G++  K++  
Sbjct: 73  LRNASGSVILKILSG 87

>pdb|1RY4|A Chain A, Nmr Structure Of The Crib-Pdz Module Of Par-6 Length = 128

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
Query: 128 VDDEEETVKIVQLVK--SNEPLGATIKTD----------EESGKIVVARVMHGGAADRSG 175
           VD   ET + V+L+K  S++PLG  I+            E+   I ++R++ GG A+ +G
Sbjct: 24  VDIVPETHRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTG 83
Query: 176 LIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNK 220
           L+ V DEV EVNGI V GKT   V  ++ ++   +   + PA+ +
Sbjct: 84  LLAVNDEVIEVNGIEVAGKTLDQVTDMMVANSSNLIITVKPANQR 128

>pdb|2XKX|A Chain A, Single Particle Analysis Of Psd-95 In Negative Stain Length = 721

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 37/183 (20%)
Query: 119 RLPEIPQELVDDEE---ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSG 175
           R   + ++L+ +E+   E  +IV + + +  LG  I   E+   I ++ ++ GG AD SG
Sbjct: 290 RYSPVAKDLLGEEDIPREPRRIV-IHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSG 348
Query: 176 LIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF--KLIP----------------- 216
            +  GD++  VNG+++   +       L+++  T+T   +  P                 
Sbjct: 349 ELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSRFEAKIHDLREQL 408
Query: 217 ADNKLGYRESKIR--------VRAHFDYDASSDPYIPCK--DAGLSFNKGDILHVVSQDD 266
            ++ LG   + +R        +RA FDYD + D    C      LSF  GD+LHV+   D
Sbjct: 409 MNSSLGSGTASLRSNPKRGFYIRALFDYDKTKD----CGFLSQALSFRFGDVLHVIDAGD 464
Query: 267 AYW 269
             W
Sbjct: 465 EEW 467

>pdb|2LC6|A Chain A, Solution Structure Of Par-6 Q144cL164C Length = 128

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 12/105 (11%)
Query: 128 VDDEEETVKIVQLVK--SNEPLGATIKTD----------EESGKIVVARVMHGGAADRSG 175
           VD   ET + V+L K  S++PLG  I+            E+   I ++R++ GG A+ +G
Sbjct: 24  VDIVPETHRRVRLCKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTG 83
Query: 176 LIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNK 220
           L+ V DEV EVNGI V GKT   V  ++ ++   +   + PA+ +
Sbjct: 84  LLAVNDEVIEVNGIEVAGKTLDQVTDMMVANSSNLIITVKPANQR 128

>pdb|2DKR|A Chain A, Solution Structure Of The Pdz Domain From Human Lin-7 Homolog B Length = 93

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 137 IVQLVKSNEPLGATI-KTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           +V+L K++E LG  I    E++  I ++RV+ GG ADR G +  GD++  VNG++VEG+ 
Sbjct: 8   VVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQ 67
Query: 196 PGDVLKILQSSEGTITF 212
               +++L++++G++  
Sbjct: 68  HEKAVELLKAAQGSVKL 84

>pdb|1X8S|A Chain A, Structure Of The Par-6 Pdz Domain With A Pals1 Internal Ligand Length = 102

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 133 ETVKIVQLVK--SNEPLGATIKTD----------EESGKIVVARVMHGGAADRSGLIHVG 180
           ET + V+L+K  S++PLG  I+            E+   I ++R++ GG A+ +GL+ V 
Sbjct: 3   ETHRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTGLLAVN 62
Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNK 220
           DEV EVNGI V GKT   V  ++ ++   +   + PA+ +
Sbjct: 63  DEVIEVNGIEVAGKTLDQVTDMMVANSSNLIITVKPANQR 102

>pdb|1RZX|A Chain A, Crystal Structure Of A Par-6 Pdz-Peptide Complex Length = 98

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 133 ETVKIVQLVK--SNEPLGATIKTD----------EESGKIVVARVMHGGAADRSGLIHVG 180
           ET + V+L+K  S++PLG  I+            E+   I ++R++ GG A+ +GL+ V 
Sbjct: 1   ETHRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTGLLAVN 60
Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD 218
           DEV EVNGI V GKT   V  ++ ++   +   + PA+
Sbjct: 61  DEVIEVNGIEVAGKTLDQVTDMMVANSSNLIITVKPAN 98

>pdb|2LOB|A Chain A, Pdz Domain Of Cal (Cystic Fibrosis Transmembrane Regulator-Associated Ligand) Length = 112

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 136 KIVQLVKSNEPLGATIKTDEESG-KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           K++ L + +E LG +I   +E G  I+++ +  G  ADR G +HVGD +  VNG+N+   
Sbjct: 30  KVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDT 89
Query: 195 TPGDVLKILQSSEGTITFKLI 215
              + + IL    G I F+++
Sbjct: 90  KHKEAVTILSQQRGEIEFEVV 110

>pdb|1NF3|C Chain C, Structure Of Cdc42 In A Complex With The Gtpase-Binding Domain Of The Cell Polarity Protein, Par6 Length = 128

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
Query: 128 VDDEEETVKIVQLVK--SNEPLGATIKTD----------EESGKIVVARVMHGGAADRSG 175
           VD   ET + V+L K  + +PLG  I+            E+   I ++R++ GG A  +G
Sbjct: 23  VDILPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTG 82
Query: 176 LIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNK 220
           L+ V DEV EVNGI V GK+   V  ++ ++   +   + PA+ +
Sbjct: 83  LLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQR 127

>pdb|4E34|A Chain A, Crystal Structure Of Cftr Associated Ligand (Cal) Pdz Domain Bound To Ical36 (Ansrwptsii) Peptide Length = 87

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 136 KIVQLVKSNEPLGATIKTDEESG-KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           K++ L + +E LG +I   +E G  I+++ +  G  ADR G +HVGD +  VNG+N+   
Sbjct: 5   KVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDT 64
Query: 195 TPGDVLKILQSSEGTITFKLI 215
              + + IL    G I F+++
Sbjct: 65  KHKEAVTILSQQRGEIEFEVV 85

>pdb|2DC2|A Chain A, Solution Structure Of Pdz Domain Length = 103

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 136 KIVQLVKSNEPLGATIKTDEESG-KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           K++ L + +E LG +I   +E G  I+++ +  G  ADR G +HVGD +  VNG+N+   
Sbjct: 12  KVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDT 71
Query: 195 TPGDVLKILQSSEGTITFKLI 215
              + + IL    G I F+++
Sbjct: 72  KHKEAVTILSQQRGEIEFEVV 92

>pdb|3QDO|A Chain A, Crystal Structure Of Pdz Domain Of Sorting Nexin 27 (Snx27) Fused To The Gly-Gly Linker Followed By C-Terminal (Eseskv) Of Girk3 Length = 109

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 17/106 (16%)
Query: 136 KIVQLVKSNEPLGATIKTD-EESGKIV------------VARVMHGGAADRSGLIHVGDE 182
           ++V++VKS    G  ++    E G++             V+ V+ GGAADR+G +  GD 
Sbjct: 8   RVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDR 66
Query: 183 VCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKI 228
           + EVNG+NVEG T   V+ ++++ E  +   ++      G  ESK+
Sbjct: 67  ILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVG---GESESKV 109

>pdb|2EEH|A Chain A, Solution Structure Of First Pdz Domain Of Pdz Domain Containing Protein 7 Length = 100

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 147 LGATIKTDEESG-KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS 205
           LG +++   E G  I V++V  G +A+R+GL  VGD++ EVNG+++E  T G  +K+L S
Sbjct: 24  LGFSVRGGSEHGLGIFVSKVEEGSSAERAGLC-VGDKITEVNGLSLESTTMGSAVKVLTS 82
Query: 206 S 206
           S
Sbjct: 83  S 83

>pdb|3QGL|A Chain A, Crystal Structure Of Pdz Domain Of Sorting Nexin 27 (Snx27) In Complex With The Eseskv Peptide Corresponding To The C-Terminal Tail Of Girk3 Length = 101

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 14/85 (16%)
Query: 136 KIVQLVKSNEPLGATIKTD-EESGKIV------------VARVMHGGAADRSGLIHVGDE 182
           ++V++VKS    G  ++    E G++             V+ V+ GGAADR+G +  GD 
Sbjct: 8   RVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDR 66
Query: 183 VCEVNGINVEGKTPGDVLKILQSSE 207
           + EVNG+NVEG T   V+ ++++ E
Sbjct: 67  ILEVNGVNVEGATHKQVVDLIRAGE 91

>pdb|2KOJ|A Chain A, Solution Structure Of Mouse Par-3 Pdz2 (Residues 450-558) Length = 111

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 138 VQLVKSNEPLGATIKTDE----ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           +QL K  E LG +I + +     S  I V  ++  GAA + G +  GD + EVNG+++ G
Sbjct: 15  IQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAG 74
Query: 194 KTPGDVLKILQSS--EGTITF 212
           K+  +V+ +L+S+  EGT++ 
Sbjct: 75  KSQEEVVSLLRSTKMEGTVSL 95

>pdb|2OGP|A Chain A, Solution Structure Of The Second Pdz Domain Of Par-3 Length = 97

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 138 VQLVKSNEPLGATIKTDE----ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           +QL K  E LG +I + +     S  I V  ++  GAA + G +  GD + EVNG+++ G
Sbjct: 9   IQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAG 68
Query: 194 KTPGDVLKILQSS--EGTITF 212
           K+  +V+ +L+S+  EGT++ 
Sbjct: 69  KSQEEVVSLLRSTKMEGTVSL 89

>pdb|2KOM|A Chain A, Solution Structure Of Humar Par-3b Pdz2 (Residues 451-549) Length = 121

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 138 VQLVKSNEPLGATIKTDE----ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           +QL K  E LG +I + +     S  I V  ++  GAA + G +  GD + EVNG+++ G
Sbjct: 34  IQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVG 93
Query: 194 KTPGDVLKILQSS--EGTITF 212
           K+  +V+ +L+S+  EGT++ 
Sbjct: 94  KSQEEVVSLLRSTKMEGTVSL 114

>pdb|3UAT|A Chain A, Guanylate Kinase Domains Of The Maguk Family Scaffold Proteins As Specific Phospho-Protein Binding Modules Length = 296

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVV-SQDDAYW 269
           VRA FDYD + D  +P +  GL+F  GDILHV+ + DD +W
Sbjct: 14  VRALFDYDKTKDSGLPSQ--GLNFKFGDILHVINASDDEWW 52

>pdb|3HVQ|C Chain C, Crystal Structure Of A Complex Between Protein Phosphatase 1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of Neurabin Length = 170

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 160 IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF 212
           I V  V  GGAA R G I V D++ EV+GI++ G T      +L++++G + F
Sbjct: 113 IFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRF 165

>pdb|3TVT|A Chain A, Structural Basis For Discs Large Interaction With Pins Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVV-SQDDAYW 269
           VRA FDYD + D  +P +  GL F  GDILHV  + DD +W
Sbjct: 8   VRALFDYDPNRDDGLPSR--GLPFKHGDILHVTNASDDEWW 46

>pdb|2DLU|A Chain A, Solution Structure Of The Second Pdz Domain Of Human Inad- Like Protein Length = 111

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           V+ V+L+     LG  I   + SG +VV  ++ GG ADR G +  GD + ++ G NV+G 
Sbjct: 16  VEEVELINDGSGLGFGIVGGKTSG-VVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGM 74
Query: 195 TPGDVLKILQ 204
           T   V ++L+
Sbjct: 75  TSEQVAQVLR 84

>pdb|2YUY|A Chain A, Solution Structure Of Pdz Domain Of Rho Gtpase Activating Protein 21 Length = 126

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 160 IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADN 219
           I V +V  GG A  +GL   GD + +VNG +V GKT   V+ ++Q+S+ T+   ++P D+
Sbjct: 63  IFVKQVKEGGPAFEAGLC-TGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121

>pdb|3PDZ|A Chain A, Solution Structure Of The Pdz2 Domain From Human Phosphatase Hptp1e Length = 96

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 138 VQLVKSNEPLG----ATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           V+L K++  LG      + T    G I V  V+  GAA+  G IH GD V  VNG+++EG
Sbjct: 9   VELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEG 68
Query: 194 KTPGDVLKILQSS 206
            T    ++ L+++
Sbjct: 69  ATHKQAVETLRNT 81

>pdb|1D5G|A Chain A, Solution Structure Of The Pdz2 Domain From Human Phosphatase Hptp1e Complexed With A Peptide Length = 96

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 138 VQLVKSNEPLG----ATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           V+L K++  LG      + T    G I V  V+  GAA+  G IH GD V  VNG+++EG
Sbjct: 9   VELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEG 68
Query: 194 KTPGDVLKILQSS 206
            T    ++ L+++
Sbjct: 69  ATHKQAVETLRNT 81

>pdb|1UIT|A Chain A, Solution Structure Of Rsgi Ruh-006, The Third Pdz Domain Of Hdlg5 (Kiaa0583) Protein [homo Sapiens] Length = 117

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 138 VQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPG 197
           V++ K +EPLG +I + E+ G I V++V  G  A ++GL   GD++ E NGIN+   T  
Sbjct: 23  VKVQKGSEPLGISIVSGEKGG-IYVSKVTVGSIAHQAGL-EYGDQLLEFNGINLRSATEQ 80
Query: 198 DVLKILQSSEGTITF 212
               I+     TIT 
Sbjct: 81  QARLIIGQQCDTITI 95

>pdb|1UEW|A Chain A, Solution Structure Of The Forth Pdz Domain Of Human Atrophin-1 Interacting Protein 1 (Kiaa0705 Protein) Length = 114

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 133 ETVKIVQLVKSNEPLGATIKTD---EESGKIV-----VARVMHGGAADRSGLIHVGDEVC 184
           +T  +V   K NE  G  I +     ESG  +     + R++ G  ADR   + VGD + 
Sbjct: 10  QTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRIL 69
Query: 185 EVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD 218
            VNG ++      D++K+++ +  ++T ++IP +
Sbjct: 70  AVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQE 103

>pdb|2HE2|A Chain A, Crystal Structure Of The 3rd Pdz Domain Of Human Discs Large Homologue 2, Dlg2 Length = 102

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 138 VQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPG 197
           V L K +  LG  I   E+   I V+ ++ GG AD SG +  GD++  VNGI++ G +  
Sbjct: 7   VVLHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELQRGDQILSVNGIDLRGASHE 66
Query: 198 DVLKILQSSEGTIT 211
                L+ +  T+T
Sbjct: 67  QAAAALKGAGQTVT 80

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	269
3o46_A	93	Maguk P55 subfamily member 7; PDZ domain, structur	6e-38
1nf3_C	128	PAR-6B; semi-CRIB motif, switch I and II, PDZ doma	1e-33
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	2e-33
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	3e-22
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	7e-10
3tsz_A	391	Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffol	4e-33
2ejy_A	97	55 kDa erythrocyte membrane protein; GPC, maguk, P	7e-33
1va8_A	113	Maguk P55 subfamily member 5; PDZ domain, palmitoy	1e-32
1kwa_A	88	Hcask/LIN-2 protein; PDZ domain, neurexin, syndeca	3e-31
3shw_A	468	Tight junction protein ZO-1; PDZ-SH3-GUK supramodu	3e-30
1n7e_A	97	AMPA receptor interacting protein GRIP; PDZ, prote	5e-28
2e7k_A	91	Maguk P55 subfamily member 2; PDZ domain, MPP2 pro	6e-28
1v62_A	117	KIAA1719 protein; structural genomics, synaptic tr	2e-26
3gge_A	95	PDZ domain-containing protein GIPC2; structural ge	2e-24
2yt7_A	101	Amyloid beta A4 precursor protein-binding family A	7e-24
3lra_A	254	Disks large homolog 1, maguk P55 subfamily member	1e-23
3uit_A	265	INAD-like protein, maguk P55 subfamily member 5, L	7e-23
1y7n_A	90	Amyloid beta A4 precursor protein-binding family A	7e-21
1um7_A	113	Synapse-associated protein 102; PDZ, discs large h	7e-19
2qkv_A	96	Inactivation-NO-after-potential D protein; PDZ dom	7e-19
1r6j_A	82	Syntenin 1; PDZ, membrane protein; 0.73A {Homo sap	1e-18
2dc2_A	103	GOPC, golgi associated PDZ and coiled-coil motif c	2e-18
2dkr_A	93	LIN-7 homolog B; LIN-7B, PDZ, structural genomics,	3e-18
3i4w_A	104	Disks large homolog 4; alpha and beta protein, alt	4e-18
1tp5_A	119	Presynaptic density protein 95; PDZ-peptide ligand	1e-17
2qg1_A	92	Multiple PDZ domain protein; MPDZ, MUPP1, structur	2e-17
1v6b_A	118	Harmonin isoform A1; structural genomics, usher sy	2e-17
1qau_A	112	Neuronal nitric oxide synthase (residues 1-130); b	2e-17
2lob_A	112	Golgi-associated PDZ and coiled-coil motif-contai	3e-17
2la8_A	106	Inactivation-NO-after-potential D protein, KON-TI	3e-17
1uit_A	117	Human discs large 5 protein; PDZ domain, HDLG5, ma	4e-17
2dlu_A	111	INAD-like protein; PDZ domain, inadl protein, hina	6e-17
3tvt_A	292	Disks large 1 tumor suppressor protein; DLG, SRC-h	6e-17
1uep_A	103	Membrane associated guanylate kinase inverted-2 (M	9e-17
2r4h_A	112	Membrane-associated guanylate kinase, WW and PDZ c	1e-16
2qt5_A	200	Glutamate receptor-interacting protein 1; PDZ-pept	1e-16
2qt5_A	200	Glutamate receptor-interacting protein 1; PDZ-pept	8e-16
1b8q_A	127	Protein (neuronal nitric oxide synthase); PDZ doma	1e-16
1g9o_A	91	NHE-RF; PDZ domain, complex, signaling protein; 1.	2e-16
2gzv_A	114	PRKCA-binding protein; protein kinase C, PDZ domai	2e-16
1ufx_A	103	KIAA1526 protein; PDZ domain, structural genomics,	2e-16
2d90_A	102	PDZ domain containing protein 1; structural genomi	2e-16
1wfv_A	103	Membrane associated guanylate kinase inverted-2; a	2e-16
2djt_A	104	Unnamed protein product; PDZ domain, structural ge	2e-16
3gsl_A	196	Disks large homolog 4; PDZ domain, tandem, PSD-95,	2e-16
3gsl_A	196	Disks large homolog 4; PDZ domain, tandem, PSD-95,	2e-14
3r68_A	95	Na(+)/H(+) exchange regulatory cofactor NHE-RF3; P	4e-16
1kjw_A	295	Postsynaptic density protein 95; protein-protein i	4e-16
2d92_A	108	INAD-like protein; PDZ domain, inadl protein, hina	5e-16
2eei_A	106	PDZ domain-containing protein 1; regulatory factor	5e-16
1x6d_A	119	Interleukin-16; PDZ domain, lymphocyte chemoattrac	6e-16
2daz_A	124	INAD-like protein; PDZ domain, inadl protein, hina	7e-16
2he4_A	90	Na(+)/H(+) exchange regulatory cofactor NHE-RF2; p	8e-16
2yuy_A	126	RHO GTPase activating protein 21; PDZ domain, stru	8e-16
2iwn_A	97	Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUP	8e-16
3r0h_A	206	INAD, inactivation-NO-after-potential D protein; p	9e-16
3r0h_A	206	INAD, inactivation-NO-after-potential D protein; p	2e-10
2opg_A	98	Multiple PDZ domain protein; structural protein, s	1e-15
3hpk_A	125	Protein interacting with PRKCA 1; oxidized, PDZ do	1e-15
2fne_A	117	Multiple PDZ domain protein; structural protein, s	2e-15
1uew_A	114	Membrane associated guanylate kinase inverted-2 (M	2e-15
2byg_A	117	Channel associated protein of synapse-110; DLG2, P	2e-15
2q9v_A	90	Membrane-associated guanylate kinase, WW and PDZ c	2e-15
2jil_A	97	GRIP1 protein, glutamate receptor interacting prot	2e-15
1ueq_A	123	Membrane associated guanylate kinase inverted-2 (M	3e-15
2jik_A	101	Synaptojanin-2 binding protein; transmembrane, out	3e-15
2jxo_A	98	Ezrin-radixin-moesin-binding phosphoprotein 50; nh	3e-15
2iwo_A	120	Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUP	3e-15
1wha_A	105	KIAA0147 protein, scribble; PDZ domain, cellular s	3e-15
2vwr_A	95	Ligand of NUMB protein X 2; protein-binding, metal	4e-15
2i04_A	85	Membrane-associated guanylate kinase, WW and PDZ d	4e-15
1p1d_A	196	PDZ45, glutamate receptor interacting protein; PDZ	5e-15
1p1d_A	196	PDZ45, glutamate receptor interacting protein; PDZ	5e-15
3b76_A	118	E3 ubiquitin-protein ligase LNX; PDZ, bound ligand	5e-15
1wif_A	126	RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, s	5e-15
1wf8_A	107	Neurabin-I; PDZ domain, structural genomics, NPPSF	6e-15
2dm8_A	116	INAD-like protein; PDZ domain, inadl protein, hina	6e-15
1d5g_A	96	Human phosphatase HPTP1E; protein-peptide complex,	7e-15
2edz_A	114	PDZ domain-containing protein 1; CFTR-associated p	7e-15
2kjd_A	128	Sodium/hydrogen exchange regulatory cofactor NHE-	7e-15
1ihj_A	98	INAD; intermolecular disulfide bond, PDZ domain, s	7e-15
2vsp_A	91	PDZ domain-containing protein 1; membrane, cytopla	7e-15
3e17_A	88	Tight junction protein ZO-2; domain swapping, alte	7e-15
2fe5_A	94	Presynaptic protein SAP102; PDZ domain, DLG3, huma	8e-15
2jre_A	108	C60-1 PDZ domain peptide; de novo protein; NMR {Sy	1e-14
2eno_A	120	Synaptojanin-2-binding protein; mitochondrial oute	1e-14
2g5m_B	113	Neurabin-2; spinophilin, PDZ domain, CNS, synaptic	1e-14
2kpk_A	129	Membrane-associated guanylate kinase, WW and PDZ c	2e-14
1q7x_A	108	PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, str	2e-14
2awx_A	105	Synapse associated protein 97; membrane protein, s	2e-14
1qav_A	90	Alpha-1 syntrophin (residues 77-171); beta-finger,	2e-14
2rcz_A	81	Tight junction protein ZO-1; PDZ, domain-swapping,	2e-14
3egg_C	170	Spinophilin; PP1, serine/threonine phosphatase, po	2e-14
1uhp_A	107	Hypothetical protein KIAA1095; PDZ domain, semapho	2e-14
2krg_A	216	Na(+)/H(+) exchange regulatory cofactor NHE-RF1; a	2e-14
1um1_A	110	KIAA1849 protein, RSGI RUH-007; PDZ domain, human	3e-14
3qe1_A	107	Sorting nexin-27, G protein-activated inward RECT	3e-14
3ngh_A	106	PDZ domain-containing protein 1; adaptor protein,	3e-14
1i16_A	130	Interleukin 16, LCF; cytokine, lymphocyte chemoatt	4e-14
1uju_A	111	Scribble; PDZ domain, cellular signaling, structur	4e-14
2v90_A	96	PDZ domain-containing protein 3; membrane, protein	5e-14
2ehr_A	117	INAD-like protein; PDZ domain, inadl protein, hina	6e-14
1wg6_A	127	Hypothetical protein (riken cDNA 2810455B10); stru	7e-14
1v5q_A	122	GRIP1 homolog, glutamate receptor interacting prot	7e-14
3cyy_A	92	Tight junction protein ZO-1; protein-ligand comple	7e-14
2koj_A	111	Partitioning defective 3 homolog; PDZ domain, stru	7e-14
2dmz_A	129	INAD-like protein; PDZ domain, inadl protein, hina	9e-14
3axa_A	106	Afadin, nectin-3, protein AF-6; PDZ domain, fusion	9e-14
1wfg_A	131	Regulating synaptic membrane exocytosis protein 2;	1e-13
1ujd_A	117	KIAA0559 protein; PDZ domain, structural genomics,	1e-13
1x5q_A	110	LAP4 protein; PDZ domain, scribble homolog protein	1e-13
2kom_A	121	Partitioning defective 3 homolog; PAR-3B, PDZ doma	1e-13
3suz_A	388	Amyloid beta A4 precursor protein-binding family 2	2e-13
3suz_A	388	Amyloid beta A4 precursor protein-binding family 2	3e-09
2fcf_A	103	Multiple PDZ domain protein; adaptor molecule, pro	2e-13
1uez_A	101	KIAA1526 protein; PDZ domain, structural genomics,	2e-13
2kv8_A	83	RGS12, regulator of G-protein signaling 12; PDZ do	2e-13
2o2t_A	117	Multiple PDZ domain protein; structural protein, s	3e-13
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	3e-13
2iwq_A	123	Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUP	3e-13
2eaq_A	90	LIM domain only protein 7; conserved hypothetical	4e-13
2i1n_A	102	Discs, large homolog 3; DLG3, PDZ, PDZ domain, sig	4e-13
3tsv_A	124	Tight junction protein ZO-1; PDZ, scaffolding, JAM	4e-13
3nfk_A	107	Tyrosine-protein phosphatase non-receptor type 4;	4e-13
2w4f_A	97	Protein LAP4; structural protein, phosphoprotein,	5e-13
2eeh_A	100	PDZ domain-containing protein 7; structural genomi	8e-13
1whd_A	100	RGS3, regulator of G-protein signaling 3; PDZ doma	1e-12
3khf_A	99	Microtubule-associated serine/threonine-protein ki	1e-12
1uf1_A	128	KIAA1526 protein; PDZ domain, structural genomics,	2e-12
2f5y_A	91	Regulator of G-protein signalling 3 isoform 1; PDZ	2e-12
1wi4_A	109	Synip, syntaxin binding protein 4; syntaxin4-inter	2e-12
3cbz_A	108	Dishevelled-2; PDZ domain, phage derived high affi	3e-12
2db5_A	128	INAD-like protein; PDZ domain, hinadl, PALS1- asso	3e-12
1wi2_A	104	Riken cDNA 2700099C19; structural genomics, riken	3e-12
2cs5_A	119	Tyrosine-protein phosphatase, non-receptor type 4;	4e-12
1x5n_A	114	Harmonin; PDZ domain, usher syndrome 1C protein, a	7e-12
1m5z_A	91	GRIP, AMPA receptor interacting protein; six beta-	8e-12
1z87_A	263	Alpha-1-syntrophin; protein binding; NMR {Mus musc	9e-12
2dls_A	93	PDZ-rhogef, RHO guanine nucleotide exchange factor	9e-12
3k1r_A	192	Harmonin; protein-protein complex, alternative spl	1e-11
1w9e_A	166	Syntenin 1; cell adhesion, adhesion/complex, PDZ d	1e-11
1w9e_A	166	Syntenin 1; cell adhesion, adhesion/complex, PDZ d	4e-11
2edp_A	100	Fragment, shroom family member 4; APX/shroom famil	2e-11
1v5l_A	103	PDZ and LIM domain 3; actinin alpha 2 associated L	2e-11
2eeg_A	94	PDZ and LIM domain protein 4; PDZ domain, structur	2e-11
2ego_A	96	General receptor for phosphoinositides 1- associat	2e-11
1vb7_A	94	PDZ and LIM domain 2; PDZ domain PDZ-LIM protein,	2e-11
2z17_A	104	Pleckstrin homology SEC7 and coiled-coil domains-	2e-11
3l4f_D	132	SH3 and multiple ankyrin repeat domains protein 1;	2e-11
2d8i_A	114	T-cell lymphoma invasion and metastasis 1 variant;	3e-11
2vsv_A	109	Rhophilin-2; scaffold protein, RHO GTPase binding,	3e-11
1vae_A	111	Rhophilin 2, rhophilin, RHO GTPase binding protein	4e-11
1rgw_A	85	ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK,	8e-11
1wf7_A	103	Enigma homologue protein; PDZ domain, structural g	9e-11
1q3o_A	109	Shank1; PDZ, GKAP, peptide binding protein; 1.80A	1e-10
2pa1_A	87	PDZ and LIM domain protein 2; PDZ domain, structur	1e-10
2csj_A	117	TJP2 protein; PDZ domain, structural genomics, NPP	2e-10
2q3g_A	89	PDZ and LIM domain protein 7; structural genomics,	2e-10
2edv_A	96	FERM and PDZ domain-containing protein 1; cytoskel	3e-10
2h2b_A	107	Tight junction protein ZO-1; PDZ domain, phage der	4e-10
2uzc_A	88	Human pdlim5, PDZ and LIM domain 5; metal-binding,	4e-10
3bpu_A	88	Membrane-associated guanylate kinase, WW and PDZ c	1e-09
3kfv_A	308	Tight junction protein ZO-3; structural genomics c	1e-09
1wh1_A	124	KIAA1095 protein; PDZ domain, structural genomics,	1e-09
1n7t_A	103	99-MER peptide of densin-180-like protein; PDZ dom	1e-09
2pkt_A	91	PDZ and LIM domain protein 1; PDZ domain, structur	2e-09
1mfg_A	95	ERB-B2 interacting protein; PDZ domain, protein-pe	3e-09
2vz5_A	139	TAX1-binding protein 3; WNT signaling pathway, pro	5e-09
3kzd_A	94	TIAM-1, T-lymphoma invasion and metastasis-inducin	2e-08
3soe_A	113	Membrane-associated guanylate kinase, WW and PDZ c	1e-07
1ujv_A	96	Membrane associated guanylate kinase inverted-2 (M	1e-07
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	1e-06
1y74_B	50	MLIN-2/CASK, peripheral plasma membrane protein CA	1e-06
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	2e-06
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	3e-06
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	3e-06
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	3e-06
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	3e-06
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	4e-06
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	4e-06
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	4e-06
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	5e-06
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	6e-06
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	6e-06
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	6e-06
2yub_A	118	LIMK-2, LIM domain kinase 2; PDZ domain, structura	8e-06
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	8e-06
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	9e-06
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	9e-06
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	1e-05
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	1e-05
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	1e-05
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	1e-05
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	1e-05
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	1e-05
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	1e-05
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	1e-05
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	2e-05
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	2e-05
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	2e-05
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	2e-05
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	2e-05
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	2e-05
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	2e-05
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	2e-05
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	2e-05
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	3e-05
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	3e-05
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	3e-05
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	3e-05
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	3e-05
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	3e-05
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	3e-05
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	3e-05
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	4e-05
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	4e-05
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	4e-05
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	4e-05
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	4e-05
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	4e-05
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	5e-05
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	5e-05
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	5e-05
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	5e-05
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	5e-05
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	6e-05
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	6e-05
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	7e-05
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	7e-05
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	7e-05
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	7e-05
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	7e-05
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens} Length	8e-05
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	8e-05
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	9e-05
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	9e-05
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	9e-05
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	1e-04
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	1e-04
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	1e-04
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	1e-04
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	1e-04
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	1e-04
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	1e-04
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	1e-04
3u23_A	65	CD2-associated protein; structural genomics, struc	1e-04
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	1e-04
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	2e-04
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	2e-04
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	2e-04
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	2e-04
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	2e-04
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	2e-04
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	2e-04
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	2e-04
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	2e-04
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	2e-04
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	3e-04
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	3e-04
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	3e-04
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	3e-04
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	3e-04
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	3e-04
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	3e-04
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	3e-04
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	3e-04
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	4e-04
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	4e-04
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	4e-04
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	4e-04
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	4e-04
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	4e-04
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	4e-04
1awj_A	77	ITK; transferase, regulatory intramolecular comple	4e-04
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	4e-04
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	4e-04
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	4e-04
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	4e-04
1wxb_A	68	Epidermal growth factor receptor pathway substrate	5e-04
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	5e-04
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	5e-04
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	5e-04
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	6e-04
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	6e-04
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	6e-04
4a8c_A	436	Periplasmic PH-dependent serine endoprotease DEGQ;	6e-04
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	6e-04
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	6e-04
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	7e-04
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	7e-04
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	7e-04
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	7e-04
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	7e-04
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	7e-04
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	8e-04
1ky9_A	448	Protease DO, DEGP, HTRA; protein quality control,	8e-04
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	8e-04
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	8e-04
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	8e-04
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	9e-04
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	9e-04

>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} Length = 93

 Score =  127 bits (322), Expect = 6e-38
 Identities = 56/87 (64%), Positives = 72/87 (82%)

Query: 132 EETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINV 191
            ++VKI++LVK+ EPLGATIK DE++G I+VAR+M GGAADRSGLIHVGDE+ EVNGI V
Sbjct: 2   SDSVKIIRLVKNREPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPV 61

Query: 192 EGKTPGDVLKILQSSEGTITFKLIPAD 218
           E K P ++++IL  S+G ITFK+IP  
Sbjct: 62  EDKRPEEIIQILAQSQGAITFKIIPGS 88

>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A Length = 128

 Score =  118 bits (296), Expect = 1e-33
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 16/127 (12%)

Query: 107 AHDAVA-QKDYYPRLPEIPQELVDDEEETVKIVQLVK--SNEPLGATIK----------T 153
            H  ++  +D+ P    I    VD   ET + V+L K  + +PLG  I+           
Sbjct: 4   PHIVISMPQDFRPVSSIID---VDILPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHG 60

Query: 154 DEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK 213
            E+   I ++R++ GG A  +GL+ V DEV EVNGI V GK+   V  ++ ++   +   
Sbjct: 61  LEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIIT 120

Query: 214 LIPADNK 220
           + PA+ +
Sbjct: 121 VRPANQR 127

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus} Length = 721

 Score =  127 bits (319), Expect = 2e-33
 Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 31/190 (16%)

Query: 107 AHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVM 166
           A    + + Y P   ++  E     E   + + + + +  LG  I   E+   I ++ ++
Sbjct: 282 AMTPTSPRRYSPVAKDLLGEEDIPRE--PRRIVIHRGSTGLGFNIVGGEDGEGIFISFIL 339

Query: 167 HGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRES 226
            GG AD SG +  GD++  VNG+++   +       L+++  T+T        +    E+
Sbjct: 340 AGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSRFEA 399

Query: 227 KI---------------------------RVRAHFDYDASSDPYIPCKDAGLSFNKGDIL 259
           KI                            +RA FDYD + D     +   LSF  GD+L
Sbjct: 400 KIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDCGFLSQ--ALSFRFGDVL 457

Query: 260 HVVSQDDAYW 269
           HV+   D  W
Sbjct: 458 HVIDAGDEEW 467

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus} Length = 721

 Score = 95.0 bits (235), Expect = 3e-22
 Identities = 26/164 (15%), Positives = 54/164 (32%), Gaps = 12/164 (7%)

Query: 107 AHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIK------TDEESGKI 160
           A+      +             + E E  + + L + N  LG +I          +   I
Sbjct: 33  ANSPPVIVNTDTLEAPGYVNGTEGEMEYEE-ITLERGNSGLGFSIAGGTDNPHIGDDPSI 91

Query: 161 VVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNK 220
            + +++ GGAA + G + V D +  VN ++V   T    ++ L+ +   +   ++     
Sbjct: 92  FITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPP 151

Query: 221 LGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ 264
                    ++       S          G     GD    V++
Sbjct: 152 AEKVMEIKLIKGPKGLGFS-----IAGGVGNQHIPGDNSIYVTK 190

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus} Length = 721

 Score = 58.4 bits (140), Expect = 7e-10
 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 139 QLVKSNEPLGATIKT------DEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVE 192
           +L+K  + LG +I              I V +++ GGAA + G + +GD++  VN + +E
Sbjct: 159 KLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLE 218

Query: 193 GKTPGDVLKILQSSEGTITFKLIP 216
                D +  L+++   +  K+  
Sbjct: 219 DVMHEDAVAALKNTYDVVYLKVAK 242

>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A Length = 391

 Score =  123 bits (309), Expect = 4e-33
 Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 6/144 (4%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
                ++K+V+  K  + +G  +    + G I VA V+    A + GL   GD++  VN 
Sbjct: 4   MILRPSMKLVKFRK-GDSVGLRLAGGNDVG-IFVAGVLEDSPAAKEGL-EEGDQILRVNN 60

Query: 189 INVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKD 248
           ++       + +  L          ++    K  YR           Y  +   Y     
Sbjct: 61  VDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESP 120

Query: 249 AGLSFNKGDILHVVS---QDDAYW 269
            GLSFNKG++  VV          
Sbjct: 121 YGLSFNKGEVFRVVDTLYNGKLGS 144

>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A Length = 97

 Score =  114 bits (288), Expect = 7e-33
 Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 129 DDEEETVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN 187
                 V+++Q  K + EP+G  +K +E+     VAR++HGG   R G +HVGDE+ E+N
Sbjct: 7   HHSGHMVRLIQFEKVTEEPMGICLKLNEK-QSCTVARILHGGMIHRQGSLHVGDEILEIN 65

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKLIPAD 218
           G NV   +   + K ++ ++G I+ K+IP  
Sbjct: 66  GTNVTNHSVDQLQKAMKETKGMISLKVIPNQ 96

>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1 Length = 113

 Score =  114 bits (288), Expect = 1e-32
 Identities = 41/99 (41%), Positives = 65/99 (65%), Gaps = 3/99 (3%)

Query: 122 EIPQELVDDEEETVKIVQLVKS-NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVG 180
            + + +     ETVKIV++ K+ + PLGAT++   E   ++++R++ GGAA++SGL+H G
Sbjct: 13  RVYESIGHYGGETVKIVRIEKARDIPLGATVR--NEMDSVIISRIVKGGAAEKSGLLHEG 70

Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADN 219
           DEV E+NGI + GK   +V  +L    GT+TF LIP+  
Sbjct: 71  DEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSSG 109

>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1 Length = 88

 Score =  110 bits (277), Expect = 3e-31
 Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 7/92 (7%)

Query: 135 VKIVQLVKS-NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
            ++VQ  K+ +EP+G T+K +E     +VAR+MHGG   R G +HVGDE+ E+NGI+V  
Sbjct: 2   SRLVQFQKNTDEPMGITLKMNEL-NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVAN 60

Query: 194 KTPGDVLKILQSSEGTITFKLIPADNKLGYRE 225
           +T   + K+L+   G+ITFK++P+     YRE
Sbjct: 61  QTVEQLQKMLREMRGSITFKIVPS-----YRE 87

>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens} Length = 468

 Score =  116 bits (292), Expect = 3e-30
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 6/139 (4%)

Query: 134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           ++K+V+  K  + +G  +    + G I VA V+    A + GL   GD++  VN ++   
Sbjct: 1   SMKLVKFRK-GDSVGLRLAGGNDVG-IFVAGVLEDSPAAKEGL-EEGDQILRVNNVDFTN 57

Query: 194 KTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSF 253
               + +  L          ++    K  YR           Y  +   Y      GLSF
Sbjct: 58  IIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPYGLSF 117

Query: 254 NKGDILHVVS---QDDAYW 269
           NKG++  VV          
Sbjct: 118 NKGEVFRVVDTLYNGKLGS 136

>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A Length = 97

 Score =  102 bits (256), Expect = 5e-28
 Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 132 EETVKIVQLVKSNEPLGATIK-TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
              +  V+L +   PLG TI  T+E    I+++ +  GG A+R+G IH+GD +  +N  +
Sbjct: 3   GAIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSS 62

Query: 191 VEGKTPGDVLKILQSSEGTITFKLIP 216
           ++GK   + + +LQ +  T+T K+  
Sbjct: 63  LKGKPLSEAIHLLQMAGETVTLKIKK 88

>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 91

 Score =  101 bits (254), Expect = 6e-28
 Identities = 30/90 (33%), Positives = 55/90 (61%), Gaps = 4/90 (4%)

Query: 131 EEETVKIVQLVKS-NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGI 189
              + ++V + K+  E LG T +   E G++V+AR++HGG   + GL+HVGD + EVNG 
Sbjct: 3   SGSSGRMVGIRKTAGEHLGVTFR--VEGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQ 60

Query: 190 NVEGKTPGDVLKILQSSEGTITFKLIPADN 219
            V G  P  + ++L+++ G++  K++   +
Sbjct: 61  PV-GSDPRALQELLRNASGSVILKILSGPS 89

>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 117

 Score = 99.1 bits (247), Expect = 2e-26
 Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 135 VKIVQLVKS-NEPLGATIKTDEESGK--IVVARVMHGGAADRSGLIHVGDEVCEVNGINV 191
             +V++VK+    LG ++ T     K  I + R+      DRSG +H GD +  ++G ++
Sbjct: 16  PLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSM 75

Query: 192 EGKTPGDVLKILQSSEGTITFKLIPA 217
           E  +  +  K+L S    +  +++P 
Sbjct: 76  EHCSLLEATKLLASISEKVRLEILPV 101

>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens} Length = 95

 Score = 92.9 bits (231), Expect = 2e-24
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           K V + KS + LG TI TD   G   + R+  GG  D    I VGD +  +NG N+ G  
Sbjct: 7   KEVNVYKSEDSLGLTI-TDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWR 65

Query: 196 PGDVLKILQSSEGTITFKL 214
             DV K L+  +    F +
Sbjct: 66  HYDVAKKLKELKKEELFTM 84

>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens} Length = 101

 Score = 91.7 bits (228), Expect = 7e-24
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 131 EEETVKIVQLVKS-NEPLGATIK---TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEV 186
             +  + V L K   E LG  +            V+A ++HGG A+RSG + +GD +  +
Sbjct: 6   SGDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAI 65

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKL 214
           NG ++ G         ++ ++   +  L
Sbjct: 66  NGTSLVGLPLAACQAAVRETKSQTSVTL 93

>3lra_A Disks large homolog 1, maguk P55 subfamily member protein LIN-7 homolog C; tripartite complex, L27 tetramer, cell junction; 2.95A {Homo sapiens} PDB: 1rso_A Length = 254

 Score = 95.7 bits (237), Expect = 1e-23
 Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 7/145 (4%)

Query: 10  DISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNEQSH---PVLS 66
           D  +  LL  L         + E+L FL  +   K L++LV +H  +   +     P+L 
Sbjct: 75  DTGLYELLAALPAQLQPHVDSQEDLTFLWDMFGEKSLHSLVKIHEKLHYYEKQSPVPILH 134

Query: 67  NAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQE 126
            A  ++ ++ + L ++  LN + +EL  LL +PN++ LL  HD VAQK+Y   +      
Sbjct: 135 GAAALADDLAEELQNK-PLNSEIRELLKLLSKPNVKALLSVHDTVAQKNYDLEVLFQGPA 193

Query: 127 L---VDDEEETVKIVQLVKSNEPLG 148
           L   V  E +  + ++L++  +  G
Sbjct: 194 LGEPVRLERDICRAIELLEKLQRSG 218

>3uit_A INAD-like protein, maguk P55 subfamily member 5, LIN-7 homolog B; L27 domain, cell polarization, cell adhesion; 2.05A {Mus musculus} PDB: 1y76_A 1y76_B 1y74_A Length = 265

 Score = 93.5 bits (231), Expect = 7e-23
 Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 14/151 (9%)

Query: 10  DISVSSLLETLQESQSTFS--ANDEELLFLSSLLQSKELNALVHVHNSIVNEQS-----H 62
            + +  L  +L+  Q T     + E++  L  L+Q+K+      +HN+I    +      
Sbjct: 79  ILEIEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQNAFKIHNAITVHMNKASPPF 138

Query: 63  PVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPE 122
           P++SNA  ++ EV  VL      + + +EL  LL  P++Q LL AHD VA+++    L  
Sbjct: 139 PLISNAQDLAQEVQTVLKP--VHHKEGQELTALLNTPHIQALLLAHDKVAEQEMGGGLEV 196

Query: 123 IPQ-----ELVDDEEETVKIVQLVKSNEPLG 148
           + Q     E +  E +  + V+L++  +  G
Sbjct: 197 LFQGPALVEPLGLERDVSRAVELLERLQRSG 227

>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 90

 Score = 83.3 bits (206), Expect = 7e-21
 Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 7/93 (7%)

Query: 125 QELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVC 184
             L      T  +++       LG +++        ++  +M GG A+R G+  VG  + 
Sbjct: 4   HHLETMGNVTTVLIRRPDLRYQLGFSVQNG------IICSLMRGGIAERGGV-RVGHRII 56

Query: 185 EVNGINVEGKTPGDVLKILQSSEGTITFKLIPA 217
           E+NG +V       ++ IL ++ G I  K +PA
Sbjct: 57  EINGQSVVATPHEKIVHILSNAVGEIHMKTMPA 89

>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 113

 Score = 79.0 bits (195), Expect = 7e-19
 Identities = 23/84 (27%), Positives = 39/84 (46%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
             +    + + L K +  LG  I   E+   I V+ ++ GG AD SG +  GD +  VNG
Sbjct: 10  GGDAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNG 69

Query: 189 INVEGKTPGDVLKILQSSEGTITF 212
           +N+   T       L+ +  ++T 
Sbjct: 70  VNLRNATHEQAAAALKRAGQSVTI 93

>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A Length = 96

 Score = 78.1 bits (193), Expect = 7e-19
 Identities = 17/93 (18%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 123 IPQELVDDEEETVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGD 181
           IP+  ++        V L+K + + LG ++  +E      +A ++ G   +    +  GD
Sbjct: 2   IPRNSLEKFN-----VDLMKKAGKELGLSLSPNEIG--CTIADLIQGQYPEIDSKLQRGD 54

Query: 182 EVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            + + NG  +EG        + + + G ++ ++
Sbjct: 55  IITKFNGDALEGLPFQVSYALFKGANGKVSMEV 87

>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A Length = 82

 Score = 77.3 bits (191), Expect = 1e-18
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 8/83 (9%)

Query: 136 KIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           + + + K S   +G   K    +GKI    ++   +A R+GL      +CE+NG NV G 
Sbjct: 6   RTITMHKDSTGHVGFIFK----NGKIT--SIVKDSSAARNGL-LTEHNICEINGQNVIGL 58

Query: 195 TPGDVLKILQSSEGTITFKLIPA 217
               +  IL +S   +T  ++PA
Sbjct: 59  KDSQIADILSTSGTVVTITIMPA 81

>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens} Length = 103

 Score = 77.4 bits (191), Expect = 2e-18
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 133 ETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINV 191
              K++ L + +E LG +I   +E G  I+++ +  G  ADR G +HVGD +  VNG+N+
Sbjct: 9   PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNL 68

Query: 192 EGKTPGDVLKILQSSEGTITFKLIP 216
                 + + IL    G I F+++ 
Sbjct: 69  RDTKHKEAVTILSQQRGEIEFEVVY 93

>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 93

 Score = 76.5 bits (189), Expect = 3e-18
 Identities = 27/80 (33%), Positives = 51/80 (63%), Gaps = 1/80 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
            +V+L K++E LG  I   +E    I ++RV+ GG ADR G +  GD++  VNG++VEG+
Sbjct: 7   GVVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGE 66

Query: 195 TPGDVLKILQSSEGTITFKL 214
                +++L++++G++   +
Sbjct: 67  QHEKAVELLKAAQGSVKLVV 86

>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A Length = 104

 Score = 76.6 bits (189), Expect = 4e-18
 Identities = 22/99 (22%), Positives = 45/99 (45%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
           +D     + + + + +  LG  I   E    I ++ ++ GG AD SG +  GD++  VNG
Sbjct: 6   EDIPREPRRIVIHRGSTGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNG 65

Query: 189 INVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESK 227
           +++   +       L+++  T+T        +    E+K
Sbjct: 66  VDLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSRFEAK 104

>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A Length = 119

 Score = 75.5 bits (186), Expect = 1e-17
 Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 121 PEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVG 180
           PE   E  +D     + + + + +  LG  I   E+   I ++ ++ GG AD SG +  G
Sbjct: 3   PEFLGE--EDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKG 60

Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           D++  VNG+++   +       L+++  T+T   
Sbjct: 61  DQILSVNGVDLRNASHEQAAIALKNAGQTVTIIA 94

>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens} Length = 92

 Score = 74.6 bits (184), Expect = 2e-17
 Identities = 25/83 (30%), Positives = 42/83 (50%)

Query: 132 EETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINV 191
            +T+ I    K  + LG +I        + V+ ++ GG AD  G +  GD++  VNG +V
Sbjct: 3   SDTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDV 62

Query: 192 EGKTPGDVLKILQSSEGTITFKL 214
              T   V  +L+ S GT+T ++
Sbjct: 63  RNATQEAVAALLKCSLGTVTLEV 85

>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1 Length = 118

 Score = 75.2 bits (185), Expect = 2e-17
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)

Query: 131 EEETVKIVQLVKSNEPLGATIK--TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
             + V+++  +K    L   ++   D   GK+VV+ V  GGAA+R G +  GDE+  +NG
Sbjct: 15  AGKDVRLL-RIKKEGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAING 73

Query: 189 INVEGKTPGDVLKILQSSEG 208
             V   T  +    LQ +  
Sbjct: 74  KIVTDYTLAEAEAALQKAWN 93

>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B Length = 112

 Score = 74.8 bits (184), Expect = 2e-17
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 138 VQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTP 196
           V+L K     LG  +K       ++++ ++ GGAA++SGLI  GD +  VN   +   + 
Sbjct: 5   VRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSY 64

Query: 197 GDVLKILQSSEGTITFKLI 215
              L++L+         LI
Sbjct: 65  DSALEVLRGIASETHVVLI 83

>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens} Length = 112

 Score = 74.4 bits (183), Expect = 3e-17
 Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 3/102 (2%)

Query: 116 YYPRLPEIPQELVDDE--EETVKIVQLVKSNEPLGATIKTDEESG-KIVVARVMHGGAAD 172
           ++     I    +++   +   K++ L + +E LG +I   +E G  I+++ +  G  AD
Sbjct: 8   HHHSSGHIEGRHMENLYFQGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPAD 67

Query: 173 RSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           R G +HVGD +  VNG+N+      + + IL    G I F++
Sbjct: 68  RCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEV 109

>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster} Length = 106

 Score = 74.0 bits (182), Expect = 3e-17
 Identities = 14/82 (17%), Positives = 36/82 (43%), Gaps = 2/82 (2%)

Query: 133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVE 192
           E   +  + K+ + LG ++  +E      +A ++ G   +    +  GD + + NG  +E
Sbjct: 2   EKFNVDLMKKAGKELGLSLSPNEIG--CTIADLIQGQYPEIDSKLQRGDIITKFNGDALE 59

Query: 193 GKTPGDVLKILQSSEGTITFKL 214
           G        + + + G ++ ++
Sbjct: 60  GLPFQVCYALFKGANGKVSMEV 81

>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 117

 Score = 74.4 bits (183), Expect = 4e-17
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 2/84 (2%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
               E  + V++ K +EPLG +I + E+ G I V++V  G  A ++GL   GD++ E NG
Sbjct: 14  RPYVEEPRHVKVQKGSEPLGISIVSGEKGG-IYVSKVTVGSIAHQAGL-EYGDQLLEFNG 71

Query: 189 INVEGKTPGDVLKILQSSEGTITF 212
           IN+   T      I+     TIT 
Sbjct: 72  INLRSATEQQARLIIGQQCDTITI 95

>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens} Length = 111

 Score = 73.6 bits (181), Expect = 6e-17
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 124 PQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEV 183
           P+ +     E V   +L+     LG  I   + SG +VV  ++ GG ADR G +  GD +
Sbjct: 8   PETVCWGHVEEV---ELINDGSGLGFGIVGGKTSG-VVVRTIVPGGLADRDGRLQTGDHI 63

Query: 184 CEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            ++ G NV+G T   V ++L++   ++   +
Sbjct: 64  LKIGGTNVQGMTSEQVAQVLRNCGNSVRMLV 94

>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A* Length = 292

 Score = 77.5 bits (191), Expect = 6e-17
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           ++  + VRA FDYD + D  +P +  GL F  GDILHV +  D  W
Sbjct: 2   QKRSLYVRALFDYDPNRDDGLPSR--GLPFKHGDILHVTNASDDEW 45

>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 103

 Score = 72.7 bits (179), Expect = 9e-17
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 1/87 (1%)

Query: 130 DEEETVKIVQLVKSNEPLGATIKT-DEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
                   V L +     G  I   DE    I++  V+  G+ADR G +H GDE+  V+G
Sbjct: 5   SSGYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDG 64

Query: 189 INVEGKTPGDVLKILQSSEGTITFKLI 215
           I V GKT   V+ ++  +       L 
Sbjct: 65  IPVAGKTHRYVIDLMHHAARNGQVNLT 91

>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens} Length = 112

 Score = 73.2 bits (180), Expect = 1e-16
 Identities = 19/94 (20%), Positives = 44/94 (46%), Gaps = 1/94 (1%)

Query: 122 EIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVG 180
           ++  E +  +      V+L +  +  G +++   E    + V R+   G A+RSG + +G
Sbjct: 12  DLGTENLYFQSMDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIG 71

Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           DE+ E+NG   +       ++++++    +   L
Sbjct: 72  DEILEINGETTKNMKHSRAIELIKNGGRRVRLFL 105

>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus} Length = 200

 Score = 75.2 bits (185), Expect = 1e-16
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 129 DDEEETVKIVQLVKS-NEPLGATIKT-DEESGKIVVARVMHGGAADRSGLIHVGDEVCEV 186
               +   +V+L+K     LG T+    ++ GK  V+ +  GG A RS  + VGD +  V
Sbjct: 2   PGSFKGSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAV 61

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKL 214
           NGIN+      +++ +L++    +  ++
Sbjct: 62  NGINLAKFRHDEIISLLKNVGERVVLEV 89

>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus} Length = 200

 Score = 72.8 bits (179), Expect = 8e-16
 Identities = 24/101 (23%), Positives = 35/101 (34%), Gaps = 5/101 (4%)

Query: 119 RLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGK-----IVVARVMHGGAADR 173
                              V L K     G  I+      +     +V+  V  GG ADR
Sbjct: 91  YELPPVSIQGSSVMFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADR 150

Query: 174 SGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            G I  GD +  V+GI + G T  + + IL+      T  +
Sbjct: 151 EGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLI 191

>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1 Length = 127

 Score = 73.4 bits (180), Expect = 1e-16
 Identities = 20/85 (23%), Positives = 38/85 (44%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
           E   + +    +    LG  +K       ++++ ++ GGAA++SGLI  GD +  VN   
Sbjct: 6   EPNVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRP 65

Query: 191 VEGKTPGDVLKILQSSEGTITFKLI 215
           +   +    L++L+         LI
Sbjct: 66  LVDLSYDSALEVLRGIASETHVVLI 90

>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A Length = 91

 Score = 71.5 bits (176), Expect = 2e-16
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           ++  L K     G  +  ++      +  V  G  A+++GL   GD + EVNG NVE +T
Sbjct: 5   RLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGL-LAGDRLVEVNGENVEKET 63

Query: 196 PGDVLKILQSSEGTITFKLIPAD 218
              V+  ++++   +   ++  +
Sbjct: 64  HQQVVSRIRAALNAVRLLVVDPE 86

>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A Length = 114

 Score = 72.5 bits (178), Expect = 2e-16
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 131 EEETVKIVQLVK-SNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNG 188
           +      V L K +   +G +I    +    + + +V     A   G +  GDE+  VNG
Sbjct: 21  QSMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNG 80

Query: 189 INVEGKTPGDVLKILQSSEGTITFKL 214
            +++GKT  +V K++Q  +G +T   
Sbjct: 81  RSIKGKTKVEVAKMIQEVKGEVTIHY 106

>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 103

 Score = 72.1 bits (177), Expect = 2e-16
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 2/85 (2%)

Query: 133 ETVKIVQLVKSNEPLGATIK--TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
            +  +V++ KS   LG  I+   +       +  +  GG+A   G + VG  + EVNG+ 
Sbjct: 5   SSGTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLT 64

Query: 191 VEGKTPGDVLKILQSSEGTITFKLI 215
           + GK   +  +I+  +  T     I
Sbjct: 65  LRGKEHREAARIIAEAFKTKDRDYI 89

>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 102

 Score = 72.0 bits (177), Expect = 2e-16
 Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 1/92 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           ++V + K +   G  ++   E    ++  +  G  A+ +GL    D V  VNG +VE   
Sbjct: 8   RVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGL-KNNDLVVAVNGKSVEALD 66

Query: 196 PGDVLKILQSSEGTITFKLIPADNKLGYRESK 227
              V+++++      T  ++  + +  Y  S 
Sbjct: 67  HDGVVEMIRKGGDQTTLLVLDKEAESIYSLSG 98

>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 103

 Score = 72.0 bits (177), Expect = 2e-16
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIK--TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEV 186
             ++     V + K  +  G +I+   + +   + V R+   G A R+G + VGD++ E+
Sbjct: 6   SGQDFDYFTVDMEKGAKGFGFSIRGGREYKMD-LYVLRLAEDGPAIRNGRMRVGDQIIEI 64

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKL 214
           NG +    T    +++++S    +   L
Sbjct: 65  NGESTRDMTHARAIELIKSGGRRVRLLL 92

>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 71.9 bits (177), Expect = 2e-16
 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 138 VQLVKSNEPLGATIKTDEESGK---IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           V+LV+     G T+    +      + V  ++  G A R G + VGD V  +NG + +G 
Sbjct: 15  VELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGL 74

Query: 195 TPGDVLKILQSSEGTITFKL 214
           T    ++ +++    +   +
Sbjct: 75  THAQAVERIRAGGPQLHLVI 94

>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A Length = 196

 Score = 74.4 bits (183), Expect = 2e-16
 Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 6/89 (6%)

Query: 132 EETVKIVQLVKSNEPLGATI------KTDEESGKIVVARVMHGGAADRSGLIHVGDEVCE 185
               + + L + N  LG +I          +   I + +++ GGAA + G + V D +  
Sbjct: 3   SMEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILF 62

Query: 186 VNGINVEGKTPGDVLKILQSSEGTITFKL 214
           VN ++V   T    ++ L+ +   +   +
Sbjct: 63  VNEVDVREVTHSAAVEALKEAGSIVRLYV 91

>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A Length = 196

 Score = 69.0 bits (169), Expect = 2e-14
 Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 6/82 (7%)

Query: 139 QLVKSNEPLGATIKTDEESGK------IVVARVMHGGAADRSGLIHVGDEVCEVNGINVE 192
           +L+K  + LG +I     +        I V +++ GGAA + G + +GD++  VN + +E
Sbjct: 105 KLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLE 164

Query: 193 GKTPGDVLKILQSSEGTITFKL 214
                D +  L+++   +  K+
Sbjct: 165 DVMHEDAVAALKNTYDVVYLKV 186

>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} PDB: 3r69_A* Length = 95

 Score = 70.8 bits (174), Expect = 4e-16
 Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           ++V + K +   G  ++   E    ++  +  G  A+ +GL    D V  VNG +VE   
Sbjct: 7   RVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGL-KNNDLVVAVNGKSVEALD 65

Query: 196 PGDVLKILQSSEGTITFKLIPADNKLGYRE 225
              V+++++      T  ++  + +  +R+
Sbjct: 66  HDGVVEMIRKGGDQTTLLVLDKELERPHRD 95

>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A Length = 295

 Score = 75.2 bits (185), Expect = 4e-16
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +RA FDYD + D     +   LSF  GD+LHV+   D  W
Sbjct: 4   IRALFDYDKTKDCGFLSQ--ALSFRFGDVLHVIDAGDEEW 41

>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens} Length = 108

 Score = 71.3 bits (175), Expect = 5e-16
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 132 EETVKIVQLVKSNEPLGATIKTDEESGK-----IVVARVMHGGAADRSGLIHVGDEVCEV 186
              VKIV+LVK  + LG +I   ++        IV+  ++  G A+RSG +  GD +  V
Sbjct: 13  SPEVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSV 72

Query: 187 NGINVEGKTPGDVLKILQSS-EGTITFKL 214
           N   ++  +  + ++IL++   G +   +
Sbjct: 73  NEYCLDNTSLAEAVEILKAVPPGLVHLGI 101

>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 106

 Score = 70.9 bits (174), Expect = 5e-16
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           ++  LVK     G ++KT +    + +  +   G A R+G+    D + EVNG NVE  +
Sbjct: 10  RLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGV-LADDHLIEVNGENVEDAS 68

Query: 196 PGDVLKILQSSEGTITFKLIPADNKLGYRESKI 228
             +V++ ++ S   + F L+  +    + E K 
Sbjct: 69  HEEVVEKVKKSGSRVMFLLVDKETDKRHVEQKS 101

>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2 Length = 119

 Score = 71.3 bits (175), Expect = 6e-16
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 2/94 (2%)

Query: 124 PQELVDDEEETVKIVQLVKSNEPLGATIK--TDEESGKIVVARVMHGGAADRSGLIHVGD 181
               +   +     +   +    LG ++    D E+  I V RV   G A + G I  G+
Sbjct: 6   SGATLKQLDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGN 65

Query: 182 EVCEVNGINVEGKTPGDVLKILQSSEGTITFKLI 215
           EV  +NG +++G T  D L IL+ +       ++
Sbjct: 66  EVLSINGKSLKGTTHHDALAILRQAREPRQAVIV 99

>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens} Length = 124

 Score = 71.3 bits (175), Expect = 7e-16
 Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIK--TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEV 186
            D    + I++L K    LG ++    D     I V  +   G A   G + +GDE+ E+
Sbjct: 20  ADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEI 79

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKL 214
           N   + G++  +   I++++   +    
Sbjct: 80  NNQILYGRSHQNASAIIKTAPSKVKLVF 107

>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A Length = 90

 Score = 70.0 bits (172), Expect = 8e-16
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           ++  L K  +  G  + +D+      +  V  G  A RSGL    D + EVNG NVEG  
Sbjct: 6   RLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGL-RAQDRLIEVNGQNVEGLR 64

Query: 196 PGDVLKILQSSEGTITFKLIPADNKL 221
             +V+  +++ E      ++    +L
Sbjct: 65  HAEVVASIKAREDEARLLVVGPSTRL 90

>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 126

 Score = 71.1 bits (174), Expect = 8e-16
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 148 GATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE 207
           G      E    I V +V  GG A  +GL   GD + +VNG +V GKT   V+ ++Q+S+
Sbjct: 51  GKQRNRLEPMDTIFVKQVKEGGPAFEAGL-CTGDRIIKVNGESVIGKTYSQVIALIQNSD 109

Query: 208 GTITFKLIPAD 218
            T+   ++P D
Sbjct: 110 TTLELSVMPKD 120

>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens} Length = 97

 Score = 70.0 bits (172), Expect = 8e-16
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 138 VQLVKSNEPLGATIK-----TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVE 192
           V+L K+ + LG TI         E   I V  +    A +  G I +GD++  V+G N++
Sbjct: 8   VELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQ 67

Query: 193 GKTPGDVLKILQSSEGTITFKL 214
           G T    +++L+ +  T+   L
Sbjct: 68  GFTNQQAVEVLRHTGQTVLLTL 89

>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster} Length = 206

 Score = 73.0 bits (179), Expect = 9e-16
 Identities = 17/87 (19%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 129 DDEEETVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN 187
           D  E     V L+K + + LG ++  +E      +A ++ G   +    +  GD + + N
Sbjct: 108 DPPELEKFNVDLMKKAGKELGLSLSPNEIG--CTIADLIQGQYPEIDSKLQRGDIITKFN 165

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKL 214
           G  +EG        + + + G ++ ++
Sbjct: 166 GDALEGLPFQVCYALFKGANGKVSMEV 192

>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster} Length = 206

 Score = 58.0 bits (140), Expect = 2e-10
 Identities = 12/82 (14%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 117 YPRLPEIPQELVDDEEETVKIVQLVKSNEPLGATI---KTDEESGKIVVARVMHGGAADR 173
                    E+  +++  ++   L    +P+G  +   K +  +   V+  V   G    
Sbjct: 4   SKPQEPATAEIKPNKKILIE---LKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAA 60

Query: 174 SGLIHVGDEVCEVNGINVEGKT 195
              + + D +C++NG  +   +
Sbjct: 61  DKRLKIFDHICDINGTPIHVGS 82

>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens} Length = 98

 Score = 69.6 bits (171), Expect = 1e-15
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 137 IVQLVKSNEPLGATIK--TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
            +++ K    LG +I   +D   G I++  V   GAA + G +  GD++ EVNGI++   
Sbjct: 7   TIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKA 66

Query: 195 TPGDVLKILQSSEGTITFKL 214
           T  + + +L+ +   +   L
Sbjct: 67  THDEAINVLRQTPQRVRLTL 86

>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A Length = 125

 Score = 70.2 bits (172), Expect = 1e-15
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 132 EETVKIVQLVK-SNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGI 189
                 V L K +   +G +I    +    + + +V     A   G +  GDE+  VNG 
Sbjct: 17  PTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGR 76

Query: 190 NVEGKTPGDVLKILQSSEGTITFKL 214
           +++GKT  +V K++Q  +G +T   
Sbjct: 77  SIKGKTKVEVAKMIQEVKGEVTIHY 101

>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1 Length = 117

 Score = 70.1 bits (172), Expect = 2e-15
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 124 PQELVDDEEETVKIVQLVKSNEPLGATIK--TDEESGK--IVVARVMHGGAADRSGLIHV 179
            + L        K + L +  + LG +I        G   I V  V   GAA   G +  
Sbjct: 15  TENLYFQSMPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKR 74

Query: 180 GDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           GD++  VNG ++EG T  + + IL+ ++GT+T  +
Sbjct: 75  GDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMV 109

>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 114

 Score = 69.8 bits (171), Expect = 2e-15
 Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKT--------DEESGKIVVARVMHGGAADRSGLIHVG 180
               +T  +V   K NE  G  I +           +    + R++ G  ADR   + VG
Sbjct: 6   SGSLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVG 65

Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADN 219
           D +  VNG ++      D++K+++ +  ++T ++IP + 
Sbjct: 66  DRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEE 104

>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1 Length = 117

 Score = 69.7 bits (171), Expect = 2e-15
 Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 122 EIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGK------IVVARVMHGGAADRSG 175
           ++  E +  +  TV  ++L K  + LG +I     +        I V +++ GGAA + G
Sbjct: 12  DLGTENLYFQSMTVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDG 71

Query: 176 LIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            + VGD +  VN  ++E  T  + + IL+++   +  K+
Sbjct: 72  RLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKV 110

>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens} Length = 90

 Score = 68.8 bits (169), Expect = 2e-15
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           + + L +     G  I    E G+ I +  ++  GAAD  G +  GDE+  V+G  V GK
Sbjct: 4   QDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGK 63

Query: 195 TPGDVLKILQSSEGTITFKLIPADNKL 221
           +   V++++Q +       L     +L
Sbjct: 64  SHQLVVQLMQQAAKQGHVNLTVRQTRL 90

>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens} Length = 97

 Score = 68.8 bits (169), Expect = 2e-15
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 133 ETVKIVQLVKSNEPLGATIK-----TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN 187
            TV++  L K     G  I+        +S  +V+  V  GG ADR G I  GD +  V+
Sbjct: 3   RTVEVT-LHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVD 61

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKL 214
           GI + G T  + + IL+         +
Sbjct: 62  GIRLLGTTHAEAMSILKQCGQEAALLI 88

>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 123

 Score = 69.4 bits (170), Expect = 3e-15
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKT-DEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN 187
              + T     L KSN   G TI   DE    + V  V+  G A + G +  GD +  +N
Sbjct: 14  SQLKGTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYIN 73

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKLI 215
            + V G T  DV+K+ QS     +  L+
Sbjct: 74  EVCVLGHTHADVVKLFQSVPIGQSVNLV 101

>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A Length = 101

 Score = 68.9 bits (169), Expect = 3e-15
 Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 6/91 (6%)

Query: 130 DEEETVKIVQLVKSNEPLGATIK--TDEESGK----IVVARVMHGGAADRSGLIHVGDEV 183
           D   T + + L +    LG  I   TD++       I V+R+   GAA   G +  GD++
Sbjct: 3   DYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKI 62

Query: 184 CEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
             VNG +++     D + + +++   ++ ++
Sbjct: 63  LSVNGQDLKNLLHQDAVDLFRNAGYAVSLRV 93

>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens} Length = 98

 Score = 68.5 bits (168), Expect = 3e-15
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           ++  + K     G  + +D+      +  V     A+ SGL    D + EVNG+ +EGK 
Sbjct: 11  RLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGL-RAQDRIVEVNGVCMEGKQ 69

Query: 196 PGDVLKILQSSEGTITFKLIPADNKLGYR 224
            GDV+  +++        ++  +    ++
Sbjct: 70  HGDVVSAIRAGGDETKLLVVDRETDEFFK 98

>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A Length = 120

 Score = 69.3 bits (170), Expect = 3e-15
 Identities = 21/104 (20%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 121 PEIPQELVDDEEETVKIVQLVK-SNEPLGATIKTDEESGK----IVVARVMHGGAADRSG 175
            ++  E +  +   ++ V++ K   + LG +I     S      I +A +   G A ++ 
Sbjct: 11  VDLGTENLYFQSMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQ 70

Query: 176 LIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADN 219
            + VGD +  + G + EG T    + +L+++ G+I  +++   +
Sbjct: 71  KLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGSIEMQVVAGGD 114

>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 105

 Score = 68.9 bits (169), Expect = 3e-15
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 137 IVQLVKSNEPLGATIK-------TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGI 189
           +  L +S   LG +I               I V+R+  GGAA R+G + VGD V  +NG+
Sbjct: 10  VACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGV 69

Query: 190 NVEGKTPGDVLKILQSSEGTITFKL 214
           +V        + +L ++  TI   L
Sbjct: 70  DVTEARHDHAVSLLTAASPTIALLL 94

>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens} Length = 95

 Score = 68.5 bits (168), Expect = 4e-15
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 138 VQLVKSN--EPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           V L K +  E LG  +    +   + +  ++ GG A + G +   D V  +NG +++  T
Sbjct: 7   VALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGT 66

Query: 196 PGDVLKILQSSEGTITFKL 214
           P    +I+Q+S   +   +
Sbjct: 67  PELAAQIIQASGERVNLTI 85

>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus} Length = 85

 Score = 68.1 bits (167), Expect = 4e-15
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)

Query: 138 VQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTP 196
            +L KS+   G T+   +E  + + +  ++  G A   G +  GD +  VN   V G T 
Sbjct: 4   TKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTH 63

Query: 197 GDVLKILQSSEGTITFKLI 215
             V+KI QS     +  L 
Sbjct: 64  AQVVKIFQSIPIGASVDLE 82

>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A Length = 196

 Score = 70.6 bits (173), Expect = 5e-15
 Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 3/94 (3%)

Query: 124 PQELVDDEEETVKIVQLVKSNEPLGATIKTD---EESGKIVVARVMHGGAADRSGLIHVG 180
             E V     T  +    K +  LG TI +    +    +V++ +  G  A R+G + +G
Sbjct: 98  VAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELG 157

Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           D++  ++ I ++  +  D ++ILQ  E  +  K+
Sbjct: 158 DKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKI 191

>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A Length = 196

 Score = 70.6 bits (173), Expect = 5e-15
 Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 15/134 (11%)

Query: 126 ELVDDEEETVKIVQLVKSNEPLGATIK-----TDEESGKIVVARVMHGGAADRSGLIHVG 180
           ++V  E   V +          G  ++     T+  S   +++ +     A+R G++ +G
Sbjct: 1   QVVHTETTEVVLT--ADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIG 58

Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASS 240
           D V  +NGI  E  T  +  ++L+ S  T    L          E  +            
Sbjct: 59  DRVMAINGIPTEDSTFEEANQLLRDSSITSKVTL--------EIEFDVAESVIPSSGTFH 110

Query: 241 DPYIPCKDAGLSFN 254
                     L   
Sbjct: 111 VKLPKKHSVELGIT 124

>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens} Length = 118

 Score = 68.6 bits (168), Expect = 5e-15
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 122 EIPQELVDDEEETVKIVQLVKSN-EPLGATIK----TDEESGKIVVARVMHGGAADRSGL 176
           ++  E +  +    K+V + K   E LG T+       E    I V  V  GG   R G 
Sbjct: 12  DLGTENLYFQSMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGR 71

Query: 177 IHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD 218
           I  GD +  V+G+ +   +  + + +L+ +  +I  K +   
Sbjct: 72  IKTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLKALEVK 113

>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1 Length = 126

 Score = 68.7 bits (168), Expect = 5e-15
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 130 DEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGI 189
                V   +L   N  LG  +  +     + ++ +++ GAA   G++  GD +  V   
Sbjct: 23  SSLNKVIQTKLTVGNLGLGLVVIQNGPY--LQISHLINKGAAASDGILQPGDVLISVGHA 80

Query: 190 NVEGKTPGDVLKILQS 205
           NV G T  + LK+LQ+
Sbjct: 81  NVLGYTLREFLKLLQN 96

>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 107

 Score = 68.1 bits (167), Expect = 6e-15
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIK-------TDEESGKIVVARVMHGGAADRSGLIHVGD 181
                 +  V+L K  + LG +I           E   I V  V  GGAA R G I V D
Sbjct: 4   GSSGLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVND 63

Query: 182 EVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           ++ EV+GI++ G T      +L++++G + F +
Sbjct: 64  QIVEVDGISLVGVTQNFAATVLRNTKGNVRFVI 96

>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens} Length = 116

 Score = 68.2 bits (167), Expect = 6e-15
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 137 IVQLVKSNEPLGATIK--TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           I+++ K    LG +I    D     IV+  V   GAA R G +  GD++ EVNG+++   
Sbjct: 20  IIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNS 79

Query: 195 TPGDVLKILQSSEGTITFKL 214
           +  + +  L+ +   +   +
Sbjct: 80  SHEEAITALRQTPQKVRLVV 99

>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A Length = 96

 Score = 67.6 bits (166), Expect = 7e-15
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 138 VQLVKSNEPLGATIK----TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           V+L K++  LG ++     T    G I V  V+  GAA+  G IH GD V  VNG+++EG
Sbjct: 9   VELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEG 68

Query: 194 KTPGDVLKILQSSEGTITFKL 214
            T    ++ L+++   +   L
Sbjct: 69  ATHKQAVETLRNTGQVVHLLL 89

>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus} Length = 114

 Score = 68.3 bits (167), Expect = 7e-15
 Identities = 17/98 (17%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
            +  +L K   +  G  ++ ++++   ++  +  G  A+++GL   GD V  +NG+ V+ 
Sbjct: 14  PRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGL-LDGDRVLRINGVFVDK 72

Query: 194 KTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVR 231
           +    V+++++ S  ++T  ++  D+     ++++ ++
Sbjct: 73  EEHAQVVELVRKSGNSVTLLVLDGDSYEKAVKNQVDLK 110

>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens} Length = 128

 Score = 68.7 bits (168), Expect = 7e-15
 Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 1/93 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           ++  + K     G  + +D+      +  V     A+ SGL    D + EVNG+ +EGK 
Sbjct: 11  RLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGL-RAQDRIVEVNGVCMEGKQ 69

Query: 196 PGDVLKILQSSEGTITFKLIPADNKLGYRESKI 228
            GDV+  +++        ++  +    +++ ++
Sbjct: 70  HGDVVSAIRAGGDETKLLVVDRETDEFFKKCRV 102

>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1 Length = 98

 Score = 67.7 bits (166), Expect = 7e-15
 Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 8/96 (8%)

Query: 131 EEETVKIVQLVKS-NEPLGATIK-------TDEESGKIVVARVMHGGAADRSGLIHVGDE 182
             E + +V L K+  +  G  I         + ++  I +  ++    A   G + VGD 
Sbjct: 2   AGELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDR 61

Query: 183 VCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD 218
           +  +NG +V   T   V+ +++ ++  I  ++   D
Sbjct: 62  ILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQTFD 97

>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A Length = 91

 Score = 67.3 bits (165), Expect = 7e-15
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           K+ +L K     G  +          +  V  GG AD +GL    D + EVNG+NV  + 
Sbjct: 5   KLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAGL-EDEDVIIEVNGVNVLDEP 63

Query: 196 PGDVLKILQSSEGTITFKLIP 216
              V+  +QSS   +T  +  
Sbjct: 64  YEKVVDRIQSSGKNVTLLVCG 84

>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens} Length = 88

 Score = 67.3 bits (165), Expect = 7e-15
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 138 VQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPG 197
           V L+KS       ++   +   I V  +   G A + G +H GD + ++NG   E  +  
Sbjct: 4   VLLMKSRANEEYGLRLGSQ---IFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLT 60

Query: 198 DVLKILQSSEGTITFKL 214
           D  K+++ S G +   +
Sbjct: 61  DARKLIEKSRGKLQLVV 77

>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A Length = 94

 Score = 67.3 bits (165), Expect = 8e-15
 Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 134 TVKIVQLVKSNEPLGATI------KTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN 187
           T+  V L+K  + LG +I      +       I + +++ GGAA + G + +GD +  VN
Sbjct: 3   TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVN 62

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKL 214
             N++     + +  L+++   +  K+
Sbjct: 63  NTNLQDVRHEEAVASLKNTSDMVYLKV 89

>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic} Length = 108

 Score = 67.4 bits (165), Expect = 1e-14
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 7/92 (7%)

Query: 129 DDEEETVKIVQLVKSNEPLGATI------KTDEESGKIVVARVMHGGAADRSGLIHVGDE 182
                +V++    K    LG +I       T  E+  I V  ++ G AA   G I   D+
Sbjct: 10  GFSLYSVELF-REKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDK 68

Query: 183 VCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           +  V+ +NV+G    DV+++L+++   +   L
Sbjct: 69  ILRVDDVNVQGMAQSDVVEVLRNAGNPVRLLL 100

>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 67.9 bits (166), Expect = 1e-14
 Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 6/92 (6%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIK--TDEESGK----IVVARVMHGGAADRSGLIHVGDE 182
            D   T + + L +    LG  I   TD++       I V+R+   GAA   G +  GD+
Sbjct: 12  VDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDK 71

Query: 183 VCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           +  VNG +++     D + + +++   ++ ++
Sbjct: 72  ILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRV 103

>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus} Length = 113

 Score = 67.4 bits (165), Expect = 1e-14
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 8/91 (8%)

Query: 131 EEETVKIVQLVKSNEPLGATIK-------TDEESGKIVVARVMHGGAADRSGLIHVGDEV 183
             E    V+L K +E LG +I           E   I V  V  GGAA R G I V D +
Sbjct: 2   HMELFP-VELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLL 60

Query: 184 CEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            EV+G ++ G T      +L++++G + F +
Sbjct: 61  VEVDGTSLVGVTQSFAASVLRNTKGRVRFMI 91

>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A Length = 129

 Score = 67.5 bits (165), Expect = 2e-14
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%)

Query: 132 EETVKIVQLVKSNEPLGATIKT-DEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
           +      +L KS+   G T+   DE    + +  ++  G A   G +  GD +  VN   
Sbjct: 16  KGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTC 75

Query: 191 VEGKTPGDVLKILQSSEGTITFKL 214
           V G T   V+KI QS     +  L
Sbjct: 76  VLGHTHAQVVKIFQSIPIGASVDL 99

>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 108

 Score = 67.0 bits (164), Expect = 2e-14
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)

Query: 130 DEEETVKIVQLVKSNEPLGATIK---------TDEESGKIVVARVMHGGAADRSGLIHVG 180
            +   +  V+L K++  LG ++          T    G I V  V+  GAA+  G IH G
Sbjct: 5   PKPGDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKG 64

Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           D V  VNG+++EG T    ++ L+++   +   L
Sbjct: 65  DRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLL 98

>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A Length = 105

 Score = 66.6 bits (163), Expect = 2e-14
 Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 133 ETVKIVQLVKSNEPLGATI------KTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEV 186
           E +  ++L+K  + LG +I      +       I V +++ GGAA + G + +GD++  V
Sbjct: 2   EKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAV 61

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKL 214
           N +++E  T  + +  L+++   +  K+
Sbjct: 62  NSVSLEEVTHEEAVTALKNTSDFVYLKV 89

>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A Length = 90

 Score = 66.2 bits (162), Expect = 2e-14
 Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 131 EEETVKIVQLVKSNEPLGATIK-TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGI 189
           +   V + +       LG +IK   E    I+++++  G AAD++  + VGD +  VNG 
Sbjct: 4   QRRRVTVRK--ADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGE 61

Query: 190 NVEGKTPGDVLKILQSSEGTITFKL 214
           ++   T  + ++ L+ +   +  ++
Sbjct: 62  DLSSATHDEAVQALKKTGKEVVLEV 86

>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A Length = 81

 Score = 65.8 bits (161), Expect = 2e-14
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 138 VQLVKS--NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           V LVKS  NE  G  +     +  I V  +     A R G I  GD V ++NG   E  +
Sbjct: 4   VTLVKSRKNEEYGLRL-----ASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMS 58

Query: 196 PGDVLKILQSSEGTITFKL 214
             D   +++ S+G +   +
Sbjct: 59  LTDAKTLIERSKGKLKMVV 77

>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A Length = 170

 Score = 68.4 bits (167), Expect = 2e-14
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 7/91 (7%)

Query: 131 EEETVKIVQLVKSNEPLGATIK-------TDEESGKIVVARVMHGGAADRSGLIHVGDEV 183
           E   +  V+L K +E LG +I           E   I V  V  GGAA R G I V D +
Sbjct: 77  ERLELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLL 136

Query: 184 CEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            EV+G ++ G T      +L++++G + F +
Sbjct: 137 VEVDGTSLVGVTQSFAASVLRNTKGRVRFMI 167

>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 107

 Score = 66.6 bits (163), Expect = 2e-14
 Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 9/89 (10%)

Query: 135 VKIVQLVKSNEPLGATIK---------TDEESGKIVVARVMHGGAADRSGLIHVGDEVCE 185
              + L + +  LG  I              S  I V++++  G A + G + + D + E
Sbjct: 9   SLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIE 68

Query: 186 VNGINVEGKTPGDVLKILQSSEGTITFKL 214
           VNG ++   T    ++  ++++  I  ++
Sbjct: 69  VNGRDLSRATHDQAVEAFKTAKEPIVVQV 97

>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens} Length = 216

 Score = 69.4 bits (169), Expect = 2e-14
 Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 1/107 (0%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           ++  + K     G  + +D+      +  V     A+ SGL    D + EVNG+ +EGK 
Sbjct: 11  RLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGL-RAQDRIVEVNGVCMEGKQ 69

Query: 196 PGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDP 242
            GDV+  +++        ++  +    +++ ++             P
Sbjct: 70  HGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVP 116

>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 110

 Score = 66.2 bits (162), Expect = 3e-14
 Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGK----IVVARVMHGGAADRSGLIHVGDEVCEV 186
               V  V+L +    LG  +     +      + +  ++ G  A   G + +GD + EV
Sbjct: 5   SSGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEV 64

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKL 214
           NG ++ G      + +++     + F +
Sbjct: 65  NGSSLLGLGYLRAVDLIRHGGKKMRFLV 92

>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} Length = 106

 Score = 66.3 bits (162), Expect = 3e-14
 Identities = 17/97 (17%), Positives = 52/97 (53%), Gaps = 2/97 (2%)

Query: 136 KIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           +  +L K   +  G  ++ ++++   ++  +  G  A+++GL   GD V  +NG+ V+ +
Sbjct: 3   RESKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGL-LDGDRVLRINGVFVDKE 61

Query: 195 TPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVR 231
               V+++++ S  ++T  ++  D+     ++++ ++
Sbjct: 62  EHAQVVELVRKSGNSVTLLVLDGDSYEKAVKNQVDLK 98

>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2 Length = 130

 Score = 66.8 bits (163), Expect = 4e-14
 Identities = 21/102 (20%), Positives = 46/102 (45%), Gaps = 5/102 (4%)

Query: 118 PRLPEIPQELVDDEEETVKIVQLVKSNEPLGATIK----TDEESGKIVVARVMHGGAADR 173
                    +    E TV  V L K +  LG +++    +      + + R+  G A+++
Sbjct: 13  SASAASDVSVESTAEATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQ 72

Query: 174 SGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-EGTITFKL 214
           S  +  GDE+ ++ G  ++G T  +   I+++  +G +T  +
Sbjct: 73  SETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVI 114

>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 111

 Score = 66.2 bits (162), Expect = 4e-14
 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 11/97 (11%)

Query: 129 DDEEETVKIVQLVKS-NEPLGATIK--TDEESGK--------IVVARVMHGGAADRSGLI 177
                 ++ + + K+  E LG +I+      +G         I +++V   GAA R G +
Sbjct: 4   GSSGPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRL 63

Query: 178 HVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            VG  + EVN  ++ G T G+ +++L+S   T+T  +
Sbjct: 64  RVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLV 100

>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens} Length = 96

 Score = 65.4 bits (160), Expect = 5e-14
 Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGK---IVVARVMHGGAADRSGLIHVGDEVCEVNGINVE 192
           + + L K  +  G  ++ ++         +  V  G  A ++G+   GD +  V G +VE
Sbjct: 5   RCLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGM-QAGDRLVAVAGESVE 63

Query: 193 GKTPGDVLKILQSSEGTITFKLIPAD 218
           G    + +  +Q     ++  ++  +
Sbjct: 64  GLGHEETVSRIQGQGSCVSLTVVDPE 89

>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens} Length = 117

 Score = 65.6 bits (160), Expect = 6e-14
 Identities = 18/101 (17%), Positives = 45/101 (44%), Gaps = 12/101 (11%)

Query: 124 PQELVDDEEETVKIVQLVKSNEPLGATIK----------TDEESGKIVVARVMHGGAADR 173
           P          V+I +  + N  LG +I             EE   I + +V+    A +
Sbjct: 8   PNFSHWGPPRIVEIFR--EPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGK 65

Query: 174 SGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           +  +  GD++ EV+G++++  +  + ++ ++++   + F +
Sbjct: 66  TNALKTGDKILEVSGVDLQNASHSEAVEAIKNAGNPVVFIV 106

>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A Length = 127

 Score = 66.0 bits (161), Expect = 7e-14
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 124 PQELVDDEEETVKIVQLVKSNEPLGATIK--TDEESGK---IVVARVMHGGAADRSGLIH 178
              L   E+ T++I      +  LG ++K     E+G    I +  ++HGGAA + G + 
Sbjct: 16  ALSLESSEQLTLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLR 75

Query: 179 VGDEVCEVNGINVEGKTPGDVLKILQSS 206
           + D++  VNG  + GK+  + ++ L+ S
Sbjct: 76  MNDQLIAVNGETLLGKSNHEAMETLRRS 103

>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1 Length = 122

 Score = 65.6 bits (160), Expect = 7e-14
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 7/96 (7%)

Query: 124 PQELVDDEEETVKIVQLVKSNEPLGATIK-----TDEESGKIVVARVMHGGAADRSGLIH 178
             ++V  E   V +          G  ++     T+  S   +++ +     A+R G++ 
Sbjct: 8   AGQVVHTETTEVVLTA--DPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQ 65

Query: 179 VGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           +GD V  +NGI  E  T  +  ++L+ S  T    L
Sbjct: 66  IGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTL 101

>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens} Length = 92

 Score = 64.7 bits (158), Expect = 7e-14
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
           +   V +V     NE  G  +     +  I V  +     A R G I  GD V ++NG  
Sbjct: 2   KPTKVTLV-KSAKNEEYGLRL-----ASHIFVKEISQDSLAARDGNIQEGDVVLKINGTV 55

Query: 191 VEGKTPGDVLKILQSSEGTITFKL 214
            E  +  D   +++ S+G +   +
Sbjct: 56  TENMSLTDAKTLIERSKGKLKMVV 79

>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A Length = 111

 Score = 65.4 bits (160), Expect = 7e-14
 Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 138 VQLVKSNEPLGATIKTDEESGK----IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           +QL K  E LG +I + + +      I V  ++  GAA + G +  GD + EVNG+++ G
Sbjct: 15  IQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAG 74

Query: 194 KTPGDVLKILQSSEGTITFKLI 215
           K+  +V+ +L+S++   T  L+
Sbjct: 75  KSQEEVVSLLRSTKMEGTVSLL 96

>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens} Length = 129

 Score = 65.5 bits (160), Expect = 9e-14
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIK------TDEESGKIVVARVMHGGAADRSGLIHVGDE 182
               ET  +  + K  + LG  I          E+  I V  V+ G AA  +G I V D+
Sbjct: 11  SSLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDK 70

Query: 183 VCEVNGINVEGKTPGDVLKILQSSEGTITFKLIP 216
           +  V+G+N++G    DV+++L+++   +   L+ 
Sbjct: 71  IVAVDGVNIQGFANHDVVEVLRNAGQVVHLTLVR 104

>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A Length = 106

 Score = 65.1 bits (159), Expect = 9e-14
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIK----TDEESGKIVVARVMHGGAADRSGLIHVGDEVC 184
           D +E  +  V L K N  +G +I       ++   I V  V+ GGAAD  G +  GD++ 
Sbjct: 6   DHKEPEIITVTLKKQNG-MGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLL 64

Query: 185 EVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            V+G ++ G +     +++  +   +T ++
Sbjct: 65  SVDGRSLVGLSQERAAELMTRTSSVVTLEV 94

>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A Length = 131

 Score = 65.6 bits (160), Expect = 1e-13
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGK----IVVARVMHGGAADRSGLIHVGDEVCEV 186
            +          S   LG  +   + +        + +V  G  AD  G +  GDEV E 
Sbjct: 34  NKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEW 93

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKLI 215
           NG  ++G T  +V  I+  S+     +L+
Sbjct: 94  NGRLLQGATFEEVYNIILESKPEPQVELV 122

>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 117

 Score = 64.8 bits (158), Expect = 1e-13
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 6/81 (7%)

Query: 140 LVKSNEPLGATIK--TDEESGK----IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
              S   LG  I    +           +A+++ GG+A+++G +  G +V E NGI +  
Sbjct: 25  HTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTS 84

Query: 194 KTPGDVLKILQSSEGTITFKL 214
           KT  +V  I+    G     +
Sbjct: 85  KTYEEVQSIISQQSGEAEICV 105

>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 110

 Score = 64.7 bits (158), Expect = 1e-13
 Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIK--------TDEESGKIVVARVMHGGAADRSGLIHVG 180
              EE    + +++    LG +I           ++ G I ++RV   G A R+G+  VG
Sbjct: 10  ARIEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEG-IFISRVSEEGPAARAGV-RVG 67

Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           D++ EVNG+ ++G    + ++ L+ +   +  ++
Sbjct: 68  DKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRV 101

>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens} Length = 121

 Score = 64.7 bits (158), Expect = 1e-13
 Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 138 VQLVKSNEPLGATIKTDEESGK----IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           +QL K  E LG +I + + +      I V  ++  GAA + G +  GD + EVNG+++ G
Sbjct: 34  IQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVG 93

Query: 194 KTPGDVLKILQSSEGTITFKLI 215
           K+  +V+ +L+S++   T  L+
Sbjct: 94  KSQEEVVSLLRSTKMEGTVSLL 115

>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A Length = 388

 Score = 68.5 bits (166), Expect = 2e-13
 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 122 EIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGD 181
           ++   +V     T  +++       LG +++        ++  +M GG A+R G+  VG 
Sbjct: 285 QVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQ------NGIICSLMRGGIAERGGV-RVGH 337

Query: 182 EVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPA 217
            + E+NG +V       +++ L +S G I  K +PA
Sbjct: 338 RIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPA 373

>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A Length = 388

 Score = 56.1 bits (134), Expect = 3e-09
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 144 NEPLGATIKT---DEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVL 200
            E LG  +           +++A +M+GG A RSG + +GD++  +NG ++ G       
Sbjct: 215 GEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQ 274

Query: 201 KILQSSEGTITFKL 214
            I++  +     KL
Sbjct: 275 GIIKGLKNQTQVKL 288

>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1 Length = 103

 Score = 63.9 bits (156), Expect = 2e-13
 Identities = 16/91 (17%), Positives = 40/91 (43%), Gaps = 11/91 (12%)

Query: 135 VKIVQLVK-SNEPLGATIK----------TDEESGKIVVARVMHGGAADRSGLIHVGDEV 183
            + V+L +  ++ LG +I             E    I +  V+    A ++G +  GD +
Sbjct: 5   PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRI 64

Query: 184 CEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            EV+G+++   +    ++ ++ +   + F +
Sbjct: 65  VEVDGMDLRDASHEQAVEAIRKAGNPVVFMV 95

>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 101

 Score = 63.9 bits (156), Expect = 2e-13
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGI 189
           E   V + +  K++E LG +I+   E G  I V+ V  G  A++ GL  VGD++  VN  
Sbjct: 8   EVRLVSL-RRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGL-RVGDQILRVNDK 65

Query: 190 NVEGKTPGDVLKILQSSEGTIT 211
           ++   T  + +K L+ S+  + 
Sbjct: 66  SLARVTHAEAVKALKGSKKLVL 87

>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens} Length = 83

 Score = 63.0 bits (154), Expect = 2e-13
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           V+ V++ +     G T+         V++ VM G  AD  GL   GD++  VN INV+  
Sbjct: 3   VRSVEVARGRAGYGFTLSGQAP---CVLSCVMRGSPADFVGL-RAGDQILAVNEINVKKA 58

Query: 195 TPGDVLKILQSSEGTITFKLIP 216
           +  DV+K++    G +   +  
Sbjct: 59  SHEDVVKLIGKCSGVLHMVIAE 80

>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} Length = 117

 Score = 63.9 bits (156), Expect = 3e-13
 Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 118 PRLPEIPQELVDD-EEETVKIVQLVK-SNEPLGATIK--TDEESGK--IVVARVMHGGAA 171
           P   E  Q + +  +   V++ +L+K  +  LG ++     E  G+  I V  +  G  A
Sbjct: 3   PACDEFDQLIKNMAQGRHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVA 62

Query: 172 DRSGLIHVGDEVCEVNGINV-EGKTPGDVLKILQSSEGTITFKL 214
            R G +   D++  +NG  + +  T    + ILQ ++ T+   +
Sbjct: 63  HRDGRLKETDQILAINGQALDQTITHQQAISILQKAKDTVQLVI 106

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A Length = 337

 Score = 67.6 bits (164), Expect = 3e-13
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           VR +  Y A+ +  +P     +SF   D LHV  + +  W
Sbjct: 41  VRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDW 80

>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens} Length = 123

 Score = 63.6 bits (155), Expect = 3e-13
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 11/105 (10%)

Query: 121 PEIPQELVDDEEETVKIVQLVK-SNEPLGATIK----------TDEESGKIVVARVMHGG 169
            ++  E +  +    + V+L +  ++ LG +I             E    I +  V+   
Sbjct: 11  VDLGTENLYFQSMQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDS 70

Query: 170 AADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            A ++G +  GD + EV+G+++   +    ++ ++ +   + F +
Sbjct: 71  PAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMV 115

>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens} Length = 90

 Score = 62.8 bits (153), Expect = 4e-13
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 132 EETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINV 191
           +  + I Q    +   G TIK D     I VA V  G  A+ S L  V DE+  +N    
Sbjct: 4   DMRISINQTPGKSLDFGFTIKWDIP--GIFVASVEAGSPAEFSQL-QVDDEIIAINNTKF 60

Query: 192 EGKTPGDVLKILQSSEGTITFKL 214
                 +  + +  ++ T    +
Sbjct: 61  SYNDSKEWEEAMAKAQETGHLVM 83

>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A Length = 102

 Score = 63.1 bits (154), Expect = 4e-13
 Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 135 VKIVQLVKSNEPLGATIK------TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
            + + L + N  LG +I          +   I + +++ GGAA   G + V D V  VN 
Sbjct: 5   YEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNE 64

Query: 189 INVEGKTPGDVLKILQSSEGTITFKL 214
           ++V        ++ L+ +   +   +
Sbjct: 65  VDVSEVVHSRAVEALKEAGPVVRLVV 90

>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A Length = 124

 Score = 63.7 bits (155), Expect = 4e-13
 Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
              ++K+V+  K  + +G  +    + G I VA V+    A + GL   GD++  VN ++
Sbjct: 26  LRPSMKLVKFRKG-DSVGLRLAGGNDVG-IFVAGVLEDSPAAKEGL-EEGDQILRVNNVD 82

Query: 191 VEGKTPGDVLKILQSSEGTITFKLIPADNKLGYRESK 227
                  + +  L          ++    K  YR   
Sbjct: 83  FTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIV 119

>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} PDB: 3nfl_A 2vph_A Length = 107

 Score = 63.3 bits (154), Expect = 4e-13
 Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 121 PEIPQELVDDEEETVKIVQLVK-SNEPLGATIKTDEESGK-IVVARVMHGGAADRS-GLI 177
           PE P        + + ++++    N   G  +K   +    ++V+RV  G  AD     +
Sbjct: 4   PEKPTPNGGIPHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRL 63

Query: 178 HVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLI 215
           + GD+V  +NG ++   T   V+  +++S    + +L+
Sbjct: 64  NEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELM 101

>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens} Length = 97

 Score = 62.7 bits (153), Expect = 5e-13
 Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 8/84 (9%)

Query: 138 VQLVKSNEPLGATIK-----TDEESGK--IVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
           + +++    LG +I      T  +     I ++RV   G A R+G+  VGD++ EVNG+ 
Sbjct: 7   LTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGV-RVGDKLLEVNGVA 65

Query: 191 VEGKTPGDVLKILQSSEGTITFKL 214
           ++G    + ++ L+ +   +  ++
Sbjct: 66  LQGAEHHEAVEALRGAGTAVQMRV 89

>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 100

 Score = 62.0 bits (151), Expect = 8e-13
 Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 3/79 (3%)

Query: 130 DEEETVKIVQLVKS-NEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVN 187
              + +  V++ KS    LG +++   E G  I V++V  G +A+R+GL  VGD++ EVN
Sbjct: 6   SGSDIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGL-CVGDKITEVN 64

Query: 188 GINVEGKTPGDVLKILQSS 206
           G+++E  T G  +K+L SS
Sbjct: 65  GLSLESTTMGSAVKVLTSS 83

>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1 Length = 100

 Score = 61.7 bits (150), Expect = 1e-12
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
           D E      + + +  +  G TI  D     + V  V  GG A+R+GL    D V ++N 
Sbjct: 10  DPENGEKLQITIRRGKDGFGFTICCDSP---VRVQAVDSGGPAERAGL-QQLDTVLQLNE 65

Query: 189 INVEGKTPGDVLKILQSSEGTIT 211
             VE     ++   ++S    I 
Sbjct: 66  RPVEHWKCVELAHEIRSCPSEII 88

>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A Length = 99

 Score = 61.3 bits (149), Expect = 1e-12
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 138 VQLVKSNEPLGATIKT--------DEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGI 189
           + +  S +  G +++         D  +   VV  V  G  A  +GL   GD +  +NG 
Sbjct: 6   IVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGL-RAGDLITHINGE 64

Query: 190 NVEGKTPGDVLKILQSSEGTITFKLIPADN 219
           +V G    DV+++L  S   I+ +    +N
Sbjct: 65  SVLGLVHMDVVELLLKSGNKISLRTTALEN 94

>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 128

 Score = 62.1 bits (151), Expect = 2e-12
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 125 QELVDDEEETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEV 183
             L   +E+ V +V        LG TI+   E G  I +  V  G  A+ SGL  VGD++
Sbjct: 14  HLLQGGDEKKVNLVL--GDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGL-KVGDQI 70

Query: 184 CEVNGINVEGKTPGDVLKILQSS 206
            EVNG +       + +++L+SS
Sbjct: 71  LEVNGRSFLNILHDEAVRLLKSS 93

>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1 Length = 91

 Score = 60.8 bits (148), Expect = 2e-12
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
            + + + +  +  G TI  D     + V  V  GG A+R+GL    D V ++N   VE  
Sbjct: 4   YRQITIPRGKDGFGFTICCDSP---VRVQAVDSGGPAERAGL-QQLDTVLQLNERPVEHW 59

Query: 195 TPGDVLKILQSSEGTITFKLI 215
              ++   ++S    I   + 
Sbjct: 60  KCVELAHEIRSCPSEIILLVW 80

>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1 Length = 109

 Score = 61.3 bits (149), Expect = 2e-12
 Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGK---IVVARVMHGGAADRSGLIHVGDEVCEVN 187
           + +    V  V     LG  I       +   + +  V+ GG   + G +  GD++  +N
Sbjct: 11  DRDPAFRVITVTKETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSIN 70

Query: 188 GINVEGKTPGDVLKILQSS 206
             ++ G +  +   I+  +
Sbjct: 71  KESMIGVSFEEAKSIITRA 89

>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A Length = 108

 Score = 60.9 bits (148), Expect = 3e-12
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 6/91 (6%)

Query: 130 DEEETVKIVQLVKSNEPLGATI---KTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEV 186
                + +   ++    LG +I     +   G I +  +M GGA    G I  GD + +V
Sbjct: 2   SHMNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQV 61

Query: 187 NGINVEGKTPGDVLKILQS---SEGTITFKL 214
           N +N E  +  D +++L+      G I   +
Sbjct: 62  NDMNFENMSNDDAVRVLRDIVHKPGPIVLTV 92

>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens} Length = 128

 Score = 61.7 bits (150), Expect = 3e-12
 Identities = 15/86 (17%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 135 VKIVQLVK-SNEPLGATIKTDEESGK----IVVARVMHGGAADRSGLIHVGDEVCEVNGI 189
           ++ + + + S   LG ++            I V  V  G  ADR   +   D++  +N  
Sbjct: 26  IEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHT 85

Query: 190 NV-EGKTPGDVLKILQSSEGTITFKL 214
            + +  +    + +LQ + G++   +
Sbjct: 86  PLDQNISHQQAIALLQQTTGSLRLIV 111

>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1 Length = 104

 Score = 60.5 bits (147), Expect = 3e-12
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 129 DDEEETVKIVQLVK-SNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEV 186
           +  +   +IV L K     LG  I+  + S   I +++V+    A R+GL   GD+V  V
Sbjct: 10  ELTQFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGL-QEGDQVLAV 68

Query: 187 NGINVEGKTPGDVLKILQSS-EGTITFKLIPA 217
           N ++ +       ++IL+++ E ++  +    
Sbjct: 69  NDVDFQDIEHSKAVEILKTAREISMRVRFFSG 100

>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 119

 Score = 61.0 bits (148), Expect = 4e-12
 Identities = 18/90 (20%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 129 DDEEETVKIVQLVK-SNEPLGATIKTDEESGK-IVVARVMHGGAADRS-GLIHVGDEVCE 185
               + + ++++    N   G  +K   +    ++V+RV  G  AD     ++ GD+V  
Sbjct: 10  GIPHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVL 69

Query: 186 VNGINVEGKTPGDVLKILQSSEGTITFKLI 215
           +NG ++   T   V+  +++S    + +L+
Sbjct: 70  INGRDIAEHTHDQVVLFIKASCERHSGELM 99

>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A Length = 114

 Score = 59.8 bits (145), Expect = 7e-12
 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 124 PQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDE 182
                +++E+ V I   +  +  LG +I +       I ++ V  G  +   GL  +GD+
Sbjct: 8   SPGNRENKEKKVFIS--LVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGL-EIGDQ 64

Query: 183 VCEVNGINVEGKTPGDVLKILQSS 206
           + EVNG++       + + +L+SS
Sbjct: 65  IVEVNGVDFSNLDHKEAVNVLKSS 88

>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 Length = 91

 Score = 59.3 bits (144), Expect = 8e-12
 Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 2/82 (2%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
           E   V +       E  G ++        + V  +   G  D  GL    D + +VN + 
Sbjct: 6   ELHKVTL-YKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGL-KPYDRLLQVNHVR 63

Query: 191 VEGKTPGDVLKILQSSEGTITF 212
                   V+ ++  S   +  
Sbjct: 64  TRDFDCCLVVPLIAESGNKLDL 85

>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} Length = 263

 Score = 62.8 bits (152), Expect = 9e-12
 Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 121 PEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESG-KIVVARVMHGGAADRSGLIHV 179
           P++P+ L+  +   V + +       LG +IK   E+   I+++++  G AAD++  + V
Sbjct: 68  PQLPEALLL-QRRRVTVRK--ADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFV 124

Query: 180 GDEVCEVNGINVEGKTPGDVLKILQSSEGTITF 212
           GD +  VNG ++   T  + ++ L+ +   +  
Sbjct: 125 GDAILSVNGEDLSSATHDEAVQALKKTGKEVVL 157

>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A Length = 93

 Score = 58.9 bits (143), Expect = 9e-12
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           + V + K     G T+  D     ++V  V  GGAA ++G+   GD + +VNG  V   +
Sbjct: 10  RCVIIQKDQHGFGFTVSGDRI---VLVQSVRPGGAAMKAGV-KEGDRIIKVNGTMVTNSS 65

Query: 196 PGDVLKILQSSEGTITFKLIP 216
             +V+K+++S    +   L+ 
Sbjct: 66  HLEVVKLIKSG-AYVALTLLG 85

>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A Length = 192

 Score = 61.1 bits (148), Expect = 1e-11
 Identities = 30/154 (19%), Positives = 68/154 (44%), Gaps = 15/154 (9%)

Query: 68  AMQISLEVLDVLLSRL-------ALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRL 120
           A +   +V  ++ +          L    + + V +   +L+ ++     +   D    L
Sbjct: 6   AREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVGDLKLVINEPSRLPLFDAIRPL 65

Query: 121 PEIPQELVDD-----EEETVKIVQLVKS-NEPLGATIKTDEESGK-IVVARVMHGGAADR 173
             +  ++  D         +K V+L +   E LG +++   E G  + ++ ++ GG AD 
Sbjct: 66  IPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADS 125

Query: 174 SGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE 207
            GL  VGDE+  +NG ++   T  +V+ ++++ +
Sbjct: 126 VGL-QVGDEIVRINGYSISSCTHEEVINLIRTEK 158

>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A Length = 166

 Score = 60.6 bits (147), Expect = 1e-11
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 136 KIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           + V L K  +  +G  +K+ +    I V  V     A   GL   GD+V ++NG N  G 
Sbjct: 6   REVILCKDQDGKIGLRLKSID--NGIFVQLVQANSPASLVGL-RFGDQVLQINGENCAGW 62

Query: 195 TPGDVLKILQSSEGT 209
           +     K+L+ + G 
Sbjct: 63  SSDKAHKVLKQAFGE 77

>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A Length = 166

 Score = 59.1 bits (143), Expect = 4e-11
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 127 LVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEV 186
            + D      I     S   +G   K  + +       ++   +A R+GL      +CE+
Sbjct: 82  TIRDRPFERTITMHKDSTGHVGFIFKNGKITS------IVKDSSAARNGL-LTEHNICEI 134

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKLIPA 217
           NG NV G     +  IL +S   +T  ++PA
Sbjct: 135 NGQNVIGLKDSQIADILSTSGTVVTITIMPA 165

>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 100

 Score = 58.5 bits (142), Expect = 2e-11
 Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVN 187
               + V +   ++   P G T+K   E  + + V+++  GG A  S  +  GDE+  +N
Sbjct: 7   GGSFQYVPVQ--LQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNIN 64

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKL 214
           G  + G +  + L +++ S   +   +
Sbjct: 65  GTPLYG-SRQEALILIKGSFRILKLIV 90

>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1 Length = 103

 Score = 58.5 bits (142), Expect = 2e-11
 Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 130 DEEETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNG 188
               +  +V  +    P G  +    +  + +V+ R+  G  A  + L   GD +  ++G
Sbjct: 2   SSGSSGNVV--LPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANL-CPGDVILAIDG 58

Query: 189 INVEGKTPGDVLKILQSSEGTITFKL 214
              E  T  D    ++++   +  K+
Sbjct: 59  FGTESMTHADAQDRIKAASYQLCLKI 84

>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 94

 Score = 58.4 bits (142), Expect = 2e-11
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGI 189
                  V L     P G  +    +    + ++RV  G  A  + L   GD +  +NG 
Sbjct: 5   SSGMPHSVTLRGP-SPWGFRLVGGRDFSAPLTISRVHAGSKAALAAL-CPGDLIQAINGE 62

Query: 190 NVEGKTPGDVLKILQSSEGTITFKL 214
           + E  T  +    ++     +T  +
Sbjct: 63  STELMTHLEAQNRIKGCHDHLTLSV 87

>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A Length = 96

 Score = 58.2 bits (141), Expect = 2e-11
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 10/90 (11%)

Query: 136 KIVQLVK-SNEPLGATIKTDEESGK--------IVVARVMHGGAADRSGLIHVGDEVCEV 186
           K++ L K  N+  G  I+T     +          VARV     A  +GL   GD +  V
Sbjct: 6   KVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGL-TPGDTIASV 64

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKLIP 216
           NG+NVEG    +++ I+++S   +  + + 
Sbjct: 65  NGLNVEGIRHREIVDIIKASGNVLRLETLY 94

>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1 Length = 94

 Score = 58.1 bits (141), Expect = 2e-11
 Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVN 187
                 + +   V    P G  I    +    I+V +V   G A+ + L   GD +  +N
Sbjct: 2   SSGSSGLTVD--VAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADL-RPGDIIVAIN 58

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKL 214
           G + E     +    ++ S   +  +L
Sbjct: 59  GQSAENMLHAEAQSKIRQSASPLRLQL 85

>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens} Length = 104

 Score = 58.3 bits (141), Expect = 2e-11
 Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 10/98 (10%)

Query: 127 LVDDEEETVKIVQLVKS-NEPLGATIKTDEESGK--------IVVARVMHGGAADRSGLI 177
           L D      K+V + K  NE  G  I++     +         ++ ++     A  +GL 
Sbjct: 8   LSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGL- 66

Query: 178 HVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLI 215
             GD +  +NG++ EG T   V+ +++SS   +T + +
Sbjct: 67  QAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETL 104

>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus} Length = 132

 Score = 59.2 bits (143), Expect = 2e-11
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)

Query: 142 KSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLK 201
           K+  P+     T        +  V  GG A R+GL  +GD + EVNG NV       V+ 
Sbjct: 49  KAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGL-RMGDFLIEVNGQNVVKVGHRQVVN 107

Query: 202 ILQSSEGTITFKLIPADNKLGYRES 226
           +++    T+  K++         E+
Sbjct: 108 MIRQGGNTLMVKVVMVTRHPDMDEA 132

>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 58.5 bits (141), Expect = 3e-11
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 6/94 (6%)

Query: 132 EETVKIVQLVKS---NEPLGATIKTDEESG--KIVVARVMHGGAADRSGLIHVGDEVCEV 186
            +  + + + KS    +  G ++ + EE G  ++ V  V   G A + GL   GDE+ E+
Sbjct: 13  PKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGL-KAGDEILEI 71

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKLIPADNK 220
           N    +      +   L      +  +  P   +
Sbjct: 72  NNRAADALNSSMLKDFLSQPSLGLLVRTYPELEE 105

>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens} Length = 109

 Score = 58.3 bits (141), Expect = 3e-11
 Identities = 16/81 (19%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           + ++       LG T++ +     + V  +    +A  +G    GD +  +  ++ +  T
Sbjct: 25  RSIRFTAEEGDLGFTLRGNAP---VQVHFLDPYCSASVAGA-REGDYIVSIQLVDCKWLT 80

Query: 196 PGDVLKILQSS-EGTITFKLI 215
             +V+K+L+S  E  I  K++
Sbjct: 81  LSEVMKLLKSFGEDEIEMKVV 101

>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1 Length = 111

 Score = 57.9 bits (140), Expect = 4e-11
 Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
            + +        LG T++ +     + V  +    +A  +G    GD +  + G++ +  
Sbjct: 16  PRGIHFTVEEGDLGFTLRGN---TPVQVHFLDPHCSASLAGA-KEGDYIVSIQGVDCKWL 71

Query: 195 TPGDVLKILQSSEG-TITFKLI 215
           T  +V+K+L+S  G  +  K++
Sbjct: 72  TVSEVMKLLKSFGGEEVEMKVV 93

>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A Length = 85

 Score = 56.1 bits (136), Expect = 8e-11
 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 138 VQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTP 196
           V L     P G  ++  ++    + ++R+  G  A +S L   GD V  ++G+N +  T 
Sbjct: 5   VTLTGPG-PWGFRLQGGKDFNMPLTISRITPGSKAAQSQL-SQGDLVVAIDGVNTDTMTH 62

Query: 197 GDVLKILQSSEGTITFKL 214
            +    ++S+   ++  L
Sbjct: 63  LEAQNKIKSASYNLSLTL 80

>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1 Length = 103

 Score = 56.6 bits (137), Expect = 9e-11
 Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 138 VQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTP 196
           V LV    P G  ++  ++    + ++ +  GG A ++ +  +GD V  ++GI+ +G T 
Sbjct: 9   VSLVGPA-PWGFRLQGGKDFNMPLTISSLKDGGKASQAHV-RIGDVVLSIDGISAQGMTH 66

Query: 197 GDVLKILQSSEGTITFKL 214
            +    +++  G++   L
Sbjct: 67  LEAQNKIKACTGSLNMTL 84

>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A* Length = 109

 Score = 56.4 bits (136), Expect = 1e-10
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 142 KSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLK 201
           K+  P+     T        +  V  GG A R+GL  +GD + EVNG NV       V+ 
Sbjct: 29  KAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGL-RMGDFLIEVNGQNVVKVGHRQVVN 87

Query: 202 ILQSSEGTITFKLIP 216
           +++    T+  K++ 
Sbjct: 88  MIRQGGNTLMVKVVM 102

>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A Length = 87

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 134 TVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVE 192
           ++ +   V    P G  I    +    I+V +V   G A  + L   GD +  +NG + E
Sbjct: 1   SMALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADL-RPGDIIVAINGESAE 59

Query: 193 GKTPGDVLKILQSSEGTITFKL 214
           G    +    ++ S   +  +L
Sbjct: 60  GMLHAEAQSKIRQSPSPLRLQL 81

>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1 Length = 117

 Score = 56.3 bits (136), Expect = 2e-10
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 11/98 (11%)

Query: 124 PQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGK-------IVVARVMHGGAADRSGL 176
             E V  E+ TV + +   S    G  +    ++         IV++ V+ GG AD  GL
Sbjct: 7   GMEEVIWEQYTVTLQK--DSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD--GL 62

Query: 177 IHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           +   D V  VNG  +E       ++ L+ S       +
Sbjct: 63  LQENDRVVMVNGTPMEDVLHSFAVQQLRKSGKIAAIVV 100

>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens} Length = 89

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 133 ETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINV 191
           ++ K+V  ++   P G  ++  ++    + ++R+  GG A ++G+  VGD V  ++G N 
Sbjct: 3   DSFKVV--LEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGV-AVGDWVLSIDGENA 59

Query: 192 EGKTPGDVLKILQSSEGTITFKL 214
              T  +    +++    ++  L
Sbjct: 60  GSLTHIEAQNKIRACGERLSLGL 82

>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 96

 Score = 55.1 bits (133), Expect = 3e-10
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 6/81 (7%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
              TVKI       +  G  I    ES  + V  V  GG+A   G +  GD++ ++N   
Sbjct: 8   VRHTVKI-DKDTLLQDYGFHI---SESLPLTVVAVTAGGSAH--GKLFPGDQILQMNNEP 61

Query: 191 VEGKTPGDVLKILQSSEGTIT 211
            E  +    + IL+ +E +++
Sbjct: 62  AEDLSWERAVDILREAEDSLS 82

>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A Length = 107

 Score = 55.1 bits (133), Expect = 4e-10
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 11/91 (12%)

Query: 131 EEETVKIVQLVKSNEPLGATIK--TDEESGK-----IVVARVMHGGAADRSGLIHVGDEV 183
           E+ TV + +        G  I    D    +     IV++ V+ GG A+  G +   D V
Sbjct: 7   EQHTVTLHR--APGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE--GQLQENDRV 62

Query: 184 CEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
             VNG++++       ++ L+ S       +
Sbjct: 63  AMVNGVSMDNVEHAFAVQQLRKSGKNAKITI 93

>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens} Length = 88

 Score = 54.6 bits (132), Expect = 4e-10
 Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 146 PLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQ 204
           P G  ++  ++    + ++ +  GG A ++ +  +GD V  ++GIN +G T  +    ++
Sbjct: 14  PWGFRLQGGKDFNMPLTISSLKDGGKAAQANV-RIGDVVLSIDGINAQGMTHLEAQNKIK 72

Query: 205 SSEGTITFKL 214
              G++   L
Sbjct: 73  GCTGSLNMTL 82

>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens} Length = 88

 Score = 53.4 bits (129), Expect = 1e-09
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 3/78 (3%)

Query: 138 VQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPG 197
           V +VK     G TI      G   V ++    +    GL   GD + EVN  NV+  T  
Sbjct: 7   VHIVKGPMGFGFTIADSPGGGGQRVKQI--VDSPRSRGL-KEGDLIVEVNKKNVQALTHN 63

Query: 198 DVLKILQSSEGTITFKLI 215
            V+ +L  S       L+
Sbjct: 64  QVVDMLVESPKGSEVTLL 81

>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens} Length = 308

 Score = 56.8 bits (136), Expect = 1e-09
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +R HF+ +       P   +GL F +GD+ HV+       
Sbjct: 7   IRTHFELE-------PSPPSGLGFTRGDVFHVLDTLHPGP 39

>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 124

 Score = 54.1 bits (130), Expect = 1e-09
 Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 125 QELVDDEEETVKIVQLVK--SNEPLGATI---KTDEESGKIVVARVMHGGAADRSGLIHV 179
            + +D EE  ++ V L +  S + LG T+     DE+   I ++ +     A + G I  
Sbjct: 10  HQEMDREELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIRE 69

Query: 180 GDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLI 215
           GD + ++NGI V+ +   + + +L S E      LI
Sbjct: 70  GDRIIQINGIEVQNRE--EAVALLTSEENKNFSLLI 103

>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A Length = 103

 Score = 53.2 bits (128), Expect = 1e-09
 Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 13/93 (13%)

Query: 131 EEETVKIVQLVKSNEPLGATIK---------TDEESGKIVVARVMHGGAADRSGLIHVGD 181
            ++ +++   V+ +  LG +I             +   I V RV   G A    L+  GD
Sbjct: 9   AKQEIRVR--VEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPAS--KLLQPGD 64

Query: 182 EVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           ++ + NG +      G  + +L++ + T+   +
Sbjct: 65  KIIQANGYSFINIEHGQAVSLLKTFQNTVELII 97

>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A* Length = 91

 Score = 52.7 bits (127), Expect = 2e-09
 Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 134 TVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVE 192
           T + + L     P G  +   ++  + + ++RV  G  A  + L  +GD +  ++G N  
Sbjct: 3   TTQQIDLQGP-GPWGFRLVGGKDFEQPLAISRVTPGSKAALANL-CIGDVITAIDGENTS 60

Query: 193 GKTPGDVLKILQSSEGTITFKL 214
             T  +    ++     +T  +
Sbjct: 61  NMTHLEAQNRIKGCTDNLTLTV 82

>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A Length = 95

 Score = 52.0 bits (125), Expect = 3e-09
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 13/91 (14%)

Query: 133 ETVKIVQLVKSNEPLGATIK---------TDEESGKIVVARVMHGGAADRSGLIHVGDEV 183
             +++   V+ +  LG +I             +   I V RV   G A    L+  GD++
Sbjct: 3   MEIRVR--VEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPAS--KLLQPGDKI 58

Query: 184 CEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            + NG +      G  + +L++ + T+   +
Sbjct: 59  IQANGYSFINIEHGQAVSLLKTFQNTVELII 89

>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A Length = 139

 Score = 52.7 bits (126), Expect = 5e-09
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 142 KSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLK 201
              +P       D+    I V RV  GG A+ +GL  +GD++ +VNG ++   T     K
Sbjct: 48  IDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGL-QIGDKIMQVNGWDMTMVTHDQARK 106

Query: 202 ILQSSEGTITFKLI 215
            L      +   L+
Sbjct: 107 RLTKRSEEVVRLLV 120

>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A Length = 94

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 6/89 (6%)

Query: 133 ETVKIVQLVK---SNEPLGATIKTDEESGK--IVVARVMHGGAADRSGLIHVGDEVCEVN 187
           +    + + K   + +  G ++ + EE G   + V  V   G A + GL   GDE+ E+N
Sbjct: 5   KVTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLK-AGDEILEIN 63

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKLIP 216
               +      +   L      +  +  P
Sbjct: 64  NRAADALNSSMLKDFLSQPSLGLLVRTYP 92

>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens} Length = 113

 Score = 48.3 bits (115), Expect = 1e-07
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           +  + L+K  +  G  I  D  +G+    +V     +     +  GD + E+   NV+  
Sbjct: 13  LVTIPLIKGPKGFGFAI-ADSPTGQ----KVKMILDSQWCQGLQKGDIIKEIYHQNVQNL 67

Query: 195 TPGDVLKILQSSEGTITFKLI 215
           T   V+++L+         L+
Sbjct: 68  THLQVVEVLKQFPVGADVPLL 88

>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1 Length = 96

 Score = 47.4 bits (113), Expect = 1e-07
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           +  + +VK  +  G TI  D  +G+ V   +   G       +  GD + E+N  NV+  
Sbjct: 11  LMTLTIVKGAQGFGFTI-ADSPTGQRVKQILDIQGCPG----LCEGDLIVEINQQNVQNL 65

Query: 195 TPGDVLKILQSSEGTITFKLI 215
           +  +V+ IL+         LI
Sbjct: 66  SHTEVVDILKDCPIGSETSLI 86

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A Length = 64

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 222 GYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           G   S++ VRA F++  +++      D  LSF+KGD++HV   ++  W
Sbjct: 1   GSANSQLVVRAKFNFQQTNE------DE-LSFSKGDVIHVTRVEEGGW 41

>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B Length = 50

 Score = 43.8 bits (103), Expect = 1e-06
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 68  AMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDY 116
           A+Q + EVL+  +S    N+D KEL  +L +P+   LL  HD VA + Y
Sbjct: 1   AVQRAKEVLE-EISCYPENNDAKELKRILTQPHFMALLQTHDVVAHEVY 48

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A Length = 61

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            K  V+A FDY A  +      D  L+F K  I+  V + D  W
Sbjct: 2   FKSAVKALFDYKAQRE------DE-LTFTKSAIIQNVEKQDGGW 38

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD 266
           S  R+ A +DYD          +A L+F  GDI+ V  + D
Sbjct: 6   SGRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEID 46

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens} Length = 67

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 6/45 (13%)

Query: 222 GYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD 266
           G    K +V+  F + A S+         LSF +GD++ ++  ++
Sbjct: 1   GSHMKKQKVKTIFPHTAGSN------KTLLSFAQGDVITLLIPEE 39

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A Length = 58

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 7/43 (16%)

Query: 227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            I+V+A +DYDA +       D  L+F +GD + V  +D A W
Sbjct: 3   GIQVKALYDYDAQTG------DE-LTFKEGDTIIVHQKDPAGW 38

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae} Length = 70

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 7/43 (16%)

Query: 228 IRVRAHFDYDASSDPYIPCKDAG-LSFNKGDILHVVSQDDAYW 269
            + +A + YDA  D      DA  +SF + +IL V   +  +W
Sbjct: 6   YKAKALYPYDADDD------DAYEISFEQNEILQVSDIEGRWW 42

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A Length = 71

 Score = 42.7 bits (101), Expect = 4e-06
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            K  V+A FDY A  +      D  L+F K  I+  V + +  W
Sbjct: 5   FKCAVKALFDYKAQRE------DE-LTFIKSAIIQNVEKQEGGW 41

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 43.1 bits (102), Expect = 4e-06
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           E  +   A F Y   +      ++  LSF +GD+L +  +  + W
Sbjct: 8   EGVVEAVACFAYTGRTA-----QE--LSFRRGDVLRLHERASSDW 45

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 42.2 bits (100), Expect = 4e-06
 Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 6/41 (14%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A +D+  S  P      + L   KGD++++  ++ + W
Sbjct: 2   MFEAAYDFPGSGSP------SELPLKKGDVIYITREEPSGW 36

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 97

 Score = 43.3 bits (102), Expect = 5e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 229 RVRAHFDYDASSD-PYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A FDYD  +  P     +  L F +G I+ V    DA  
Sbjct: 19  IFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADG 60

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 42.4 bits (100), Expect = 6e-06
 Identities = 9/38 (23%), Positives = 13/38 (34%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD 266
            + A  DYD             L+   GD++ V    D
Sbjct: 9   IMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMD 46

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 74

 Score = 42.3 bits (100), Expect = 6e-06
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             ++ +A   + A  D      +  L+F+K DI+ V+ Q + +W
Sbjct: 9   ENLKAQALCSWTAKKD------NH-LNFSKHDIITVLEQQENWW 45

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus} Length = 60

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S     A FDY   S      ++  LSF KG  L +  +    W
Sbjct: 5   SPEFAIAKFDYVGRSA-----RE--LSFKKGASLLLYHRASEDW 41

>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 118

 Score = 43.3 bits (101), Expect = 8e-06
 Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 134 TVKIVQLVKS-NEPLGATIKTDE-ESGKIVVARVMH----GGAADRSGLIHVGDEVCEVN 187
           +V ++ +  +     G ++  +   S      +V        + +    IH GD + E+N
Sbjct: 15  SVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEIN 74

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKL 214
           G  V      +V   ++ +  T+   +
Sbjct: 75  GTPVRTLRVEEVEDAIKQTSQTLQLLI 101

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 41.9 bits (99), Expect = 8e-06
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            S   V+A +DY A         D  L+F +G ++H VS++   W
Sbjct: 5   SSGRTVKALYDYKAKRS------DE-LTFCRGALIHNVSKEPGGW 42

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 76

 Score = 41.9 bits (99), Expect = 9e-06
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            ++ V+A F++  +++      D  LS  KGDI++V   ++  W
Sbjct: 9   HQLIVKARFNFKQTNE------DE-LSVCKGDIIYVTRVEEGGW 45

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens} Length = 83

 Score = 42.2 bits (99), Expect = 9e-06
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 6/45 (13%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              ++VRA  D+    DP        L+   GD++ V+ Q     
Sbjct: 16  RGSLKVRALKDFWNLHDP------TALNVRAGDVITVLEQHPDGR 54

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 78

 Score = 41.9 bits (99), Expect = 1e-05
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S  R +A  D++   D      D  L F K DI+ ++SQ D + 
Sbjct: 6   SGRRAKALLDFERHDD------DE-LGFRKNDIITIISQKDEHC 42

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            VRA FD++ + +     +D  L F KGDIL +  + +  W
Sbjct: 3   YVRALFDFNGNDE-----ED--LPFKKGDILRIRDKPEEQW 36

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens} Length = 79

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 7/46 (15%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           R +  R  A FD+  +S       +  L+F  GD++ ++S+ +  W
Sbjct: 15  RMAAPRAEALFDFTGNSK-----LE--LNFKAGDVIFLLSRINKDW 53

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A Length = 59

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            VRA F++  +++      D  LSF+KGD++HV   ++  W
Sbjct: 6   VVRAKFNFQQTNE------DE-LSFSKGDVIHVTRVEEGGW 39

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S    +A + + A  D      D  L+  KGDI+ +  + +  W
Sbjct: 6   SGRLCKALYSFQARQD------DE-LNLEKGDIVIIHEKKEEGW 42

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus} Length = 60

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              + +A + YDA         D  LSFN  DI+ ++ +D + W
Sbjct: 4   GSPQCKALYAYDAQDT------DE-LSFNANDIIDIIKEDPSGW 40

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus} Length = 68

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S  R +A  +Y   +       D  L FNKGD++ +  Q D  W
Sbjct: 6   SGPRAKALCNYRGKNP-----GD--LKFNKGDVILLRRQLDENW 42

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens} Length = 58

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 7/42 (16%)

Query: 228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +     FDY A  D      D  L+ + G+I+  + ++D  W
Sbjct: 2   VEAIVEFDYQAQHD------DE-LTISVGEIITNIRKEDGGW 36

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A Length = 62

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            K  V A +DY   S      ++  ++  KGDIL +++  +  W
Sbjct: 20  GKELVLALYDYQEKSP-----RE--VTMKKGDILTLLNSTNKDW 56

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} Length = 73

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            K  V A +DY   S      ++  ++  KGDIL +++  +  W
Sbjct: 4   GKELVLALYDYQEKSP-----RE--VTMKKGDILTLLNSTNKDW 40

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 9/45 (20%), Positives = 22/45 (48%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +S +   A +D+   ++     ++  L+F  GD++ V+   +  W
Sbjct: 8   DSIVSAEAVWDHVTMAN-----RE--LAFKAGDVIKVLDASNKDW 45

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A Length = 195

 Score = 43.4 bits (101), Expect = 2e-05
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 160 IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADN 219
           I V RV   G A    L+  GD++ + NG +      G  + +L++ + T+   ++    
Sbjct: 26  IFVTRVQPEGPAS--KLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREVG 83

Query: 220 KLGYRESKIRVRAHFDYDASSDPYIPCKD 248
               +E ++RV         S      + 
Sbjct: 84  NGAKQEIRVRVEKDGGSGGVSSVPTNLEV 112

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S    RA + ++  +       D  L F +GDI+++    D  W
Sbjct: 6   SGKVFRALYTFEPRTP------DE-LYFEEGDIIYITDMSDTNW 42

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A Length = 68

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +V A F Y +  +      D  L+F K   + V S +DA W
Sbjct: 9   KVVAQFPYKSDYE-----DD--LNFEKDQEIIVTSVEDAEW 42

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 40.3 bits (95), Expect = 2e-05
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S   VRA FD++ + +     +D  L F KGDIL +  + +  W
Sbjct: 2   SAEYVRALFDFNGNDE-----ED--LPFKKGDILRIRDKPEEQW 38

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 2e-05
 Identities = 49/311 (15%), Positives = 104/311 (33%), Gaps = 96/311 (30%)

Query: 5   EKEEFDISVSSLLETLQES-QSTFSAND-EELLFLSSLLQSKELNALVHVHNSIVNEQSH 62
           E  E       +L   +++    F   D ++     S+L  +E++        I+     
Sbjct: 10  ETGEHQYQYKDILSVFEDAFVDNFDCKDVQD--MPKSILSKEEID-------HIIMS--- 57

Query: 63  PVLSNAMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDY------ 116
               +A+  +L +   LLS+    ++  + FV              + V + +Y      
Sbjct: 58  ---KDAVSGTLRLFWTLLSK---QEEMVQKFV--------------EEVLRINYKFLMSP 97

Query: 117 ---YPRLPEIPQEL-VDDEEETVKIVQL-----VKSNEP---LGATIKTDEESGKIVVAR 164
                R P +   + ++  +      Q+     V   +P   L   +     +  +++  
Sbjct: 98  IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI-- 155

Query: 165 VMHG----G----AAD--RSGLIHVGDEVCEVNG----INV-EGKTPGDVLKILQSSEGT 209
              G    G    A D   S  +      C+++     +N+    +P  VL++LQ     
Sbjct: 156 --DGVLGSGKTWVALDVCLSYKVQ-----CKMDFKIFWLNLKNCNSPETVLEMLQ----K 204

Query: 210 ITFKLIPADNKLGYRESKIRVRAHFDYDASSD-----PYIPC-------KDAGL--SFNK 255
           + +++ P         S I++R H             PY  C       ++A    +FN 
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264

Query: 256 G-DILHVVSQD 265
              IL + ++ 
Sbjct: 265 SCKIL-LTTRF 274

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 72

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             I   A FDY   +      ++  LSF KG  L +  +    W
Sbjct: 8   EPIEAIAKFDYVGRTA-----RE--LSFKKGASLLLYQRASDDW 44

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A Length = 73

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S    RA +D++  ++         L F +GDI+ + +Q D  W
Sbjct: 6   SGPCCRALYDFEPENE-------GELGFKEGDIITLTNQIDENW 42

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A  DY A+ +         LSF +G+ + ++ Q  A W
Sbjct: 9   EFVAIADYAATDE-----TQ--LSFLRGEKILILRQTTADW 42

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           ++   V A +DY A+        D  L+ ++GDI+ V  +D+  W
Sbjct: 4   DTAPTVVALYDYTANRS------DE-LTIHRGDIIRVFFKDNEDW 41

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A Length = 60

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             +R  A FD+  +S       +  L+F  GD++ ++S+ +  W
Sbjct: 3   KHMRAEALFDFTGNSK-----LE--LNFKAGDVIFLLSRINKDW 39

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens} Length = 72

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +    +D+ + +D         LSF  GD+ HV  +++ +W
Sbjct: 12  KYVGLWDFKSRTD-------EELSFRAGDVFHVARKEEQWW 45

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum} Length = 80

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           E     RA  DY+ S           L F + DI+ +  +D    
Sbjct: 8   EFAKYARALKDYNVSDT-----SL--LPFKRNDIITITFKDQENK 45

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens} Length = 58

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             RA + ++  +       D  L F +GDI+++    D  W
Sbjct: 5   VFRALYTFEPRTP------DE-LYFEEGDIIYITDMSDTNW 38

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 62

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +   +V A F Y+A+       +D  L F +GDI+ V+S+ +  W
Sbjct: 3   KKGSQVEALFSYEATQP-----ED--LEFQEGDIILVLSKVNEEW 40

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1 Length = 83

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             K  V A +DY   S      ++  ++  KGDIL +++  +  W
Sbjct: 15  TGKELVLALYDYQEKSP-----RE--VTMKKGDILTLLNSTNKDW 52

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A Length = 68

 Score = 39.9 bits (94), Expect = 4e-05
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S    RA FD+ A +      K+  L   KGDI+++  Q D  W
Sbjct: 6   SGRPARAKFDFKAQTL-----KE--LPLQKGDIVYIYKQIDQNW 42

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 68

 Score = 39.9 bits (94), Expect = 4e-05
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S  R +  F Y   +D      D  L    GDI+ VV + +  W
Sbjct: 6   SGRRCQVAFSYLPQND------DE-LELKVGDIIEVVGEVEEGW 42

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 40.0 bits (94), Expect = 4e-05
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 6/44 (13%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S  RVRA   Y    D      D  +SF KGD+  V ++ +  W
Sbjct: 6   SGRRVRAILPYTKVPDT-----DE-ISFLKGDMFIVHNELEDGW 43

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A Length = 76

 Score = 40.0 bits (94), Expect = 4e-05
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           RV+  +D  A +D      D  L+F +G+++ V  ++D  W
Sbjct: 12  RVKTIYDCQADND------DE-LTFIEGEVIIVTGEEDQEW 45

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A Length = 58

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            V+A FD++             L+F +GD++ ++++DD  W
Sbjct: 4   FVQALFDFNPQES-------GELAFKRGDVITLINKDDPNW 37

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1 Length = 62

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
               RVRA +D++A        +D  L+F  G+++ V+   DA W
Sbjct: 3   HMARRVRALYDFEAV-------EDNELTFKHGELITVLDDSDANW 40

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 6/41 (14%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +  A +D+  S           L   KGDI+ +   + + W
Sbjct: 4   KFEAAYDFPGSGSSS------ELPLKKGDIVFISRDEPSGW 38

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1 Length = 72

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 6/41 (14%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD 266
           S  +V+  F + A ++         LSF +GD+L ++  ++
Sbjct: 6   SGQKVKTIFPHTAGNNK------TLLSFAQGDVLTLLIPEE 40

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ... Length = 62

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             K  V   +DY   S      ++  L+  KGDIL +++  +  W
Sbjct: 4   TGKELVLVLYDYQEKSP-----RE--LTVKKGDILTLLNSTNKDW 41

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S     A F+++  +       +  +SF KG+ + ++ Q D  W
Sbjct: 6   SGGEAIAKFNFNGDTQ-----VE--MSFRKGERITLLRQVDENW 42

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A Length = 73

 Score = 39.7 bits (93), Expect = 5e-05
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 5/41 (12%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           R R H D+        P     L   KGDI+ ++S+     
Sbjct: 11  RARVHTDFT-----PSPYDTDSLKLKKGDIIDIISKPPMGT 46

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 40.1 bits (94), Expect = 6e-05
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
               +V A +DY A+++      D  LSF+KG +++V+++DD  W
Sbjct: 32  HPVCQVIAMYDYAANNE------DE-LSFSKGQLINVMNKDDPDW 69

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A Length = 58

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            V+A FD+D         +D  L F +GD +HV+   D  W
Sbjct: 4   YVQALFDFDPQ-------EDGELGFRRGDFIHVMDNSDPNW 37

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} Length = 67

 Score = 39.2 bits (92), Expect = 7e-05
 Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 6/41 (14%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD 266
            ++RV+A F + A  +         LSF +GD++ ++  + 
Sbjct: 6   GRMRVKAIFSHAAGDN------STLLSFKEGDLITLLVPEA 40

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus} Length = 73

 Score = 39.2 bits (92), Expect = 7e-05
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 7/46 (15%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              +   +A +D++  +D      +  L F +GD++ + +Q D  W
Sbjct: 10  PLDQPSCKALYDFEPEND-----GE--LGFREGDLITLTNQIDENW 48

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens} Length = 92

 Score = 39.7 bits (93), Expect = 7e-05
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 7/46 (15%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              + R +  F Y   +D      D  L    GDI+ VV + +  W
Sbjct: 15  ERRRRRCQVAFSYLPQND------DE-LELKVGDIIEVVGEVEEGW 53

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens} Length = 67

 Score = 39.2 bits (92), Expect = 7e-05
 Identities = 5/46 (10%), Positives = 14/46 (30%), Gaps = 5/46 (10%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +   I  R       ++          L+   G+++ V   + +  
Sbjct: 3   QNGPIYARVIQKRVPNAY-----DKTALALEVGELVKVTKINVSGQ 43

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 75

 Score = 39.4 bits (92), Expect = 7e-05
 Identities = 6/40 (15%), Positives = 14/40 (35%), Gaps = 8/40 (20%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             +  DY+   +           F +G  + V+ ++   W
Sbjct: 13  YVSIADYEGDEE--------TAGFQEGVSMEVLERNPNGW 44

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens} Length = 65

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             R  FD+ A S      K+  L+  KGDI+++  + D  W
Sbjct: 3   AARLKFDFQAQSP-----KE--LTLQKGDIVYIHKEVDKNW 36

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens} Length = 68

 Score = 39.1 bits (92), Expect = 8e-05
 Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             R  +D++  +          L F +GDI+ + +Q D  W
Sbjct: 5   CCRGLYDFEPENQ-------GELGFKEGDIITLTNQIDENW 38

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A 3h0f_A* Length = 73

 Score = 39.2 bits (92), Expect = 9e-05
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A +DY+A ++      D  LSF+KG+   +++  +  W
Sbjct: 17  LFVALYDYEAITE-----DD--LSFHKGEKFQILNSSEGDW 50

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 38.8 bits (91), Expect = 9e-05
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A  D+ A         D  L+F KG+IL V+ +    W
Sbjct: 12  EYIAVGDFTAQQV-----GD--LTFKKGEILLVIEKKPDGW 45

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 39.3 bits (92), Expect = 9e-05
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +V A +DY          K+  LSF +G I++V+ ++D  W
Sbjct: 19  KVVAIYDYTKD-------KEDELSFQEGAIIYVIKKNDDGW 52

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A F+++  +       +  +SF KG+ + ++ Q D  W
Sbjct: 8   EAIAKFNFNGDTQ-----VE--MSFRKGERITLLRQVDENW 41

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A Length = 58

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             RA +D++A  +      D  L F  G+++ V+   +  W
Sbjct: 3   WARALYDFEALEE------DE-LGFRSGEVVEVLDSSNPSW 36

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             A FDY A +      +D  LSF  GD L V+      W
Sbjct: 10  FVALFDYQARTA-----ED--LSFRAGDKLQVLDTSHEGW 42

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A Length = 65

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 6/41 (14%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           RVRA   Y    D      D  +SF KGD+  V ++ +  W
Sbjct: 7   RVRAILPYTKVPDT-----DE-ISFLKGDMFIVHNELEDGW 41

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Length = 72

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 216 PADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              + + ++    +VRA +D++A+       +D  L+F  G+I+ V+   D  W
Sbjct: 6   HHHSHMNHQHEARKVRAIYDFEAA-------EDNELTFKAGEIITVLDDSDPNW 52

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
               +V A +DY   +       D  L   KGD   ++ + +  W
Sbjct: 6   SELKKVVALYDYMPMNA-----ND--LQLRKGDEYFILEESNLPW 43

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae} Length = 54

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            + A + Y+A  D      D  +S + GDI+ V+  DD   
Sbjct: 2   AMEAIYAYEAQGD------DE-ISIDPGDIITVIRGDDGSG 35

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            +   +VRA +D++A  D      +  L+F  G+I+ V+   DA W
Sbjct: 14  NKVARKVRALYDFEAVED------NE-LTFKHGEIIIVLDDSDANW 52

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A Length = 65

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            K + +  F+Y   ++      D  L    GDI+ +  + +  W
Sbjct: 6   KKRQCKVLFEYIPQNE------DE-LELKVGDIIDINEEVEEGW 42

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} PDB: 2d1x_A Length = 65

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +  I   A +DY A+ D      D  +SF+  DI+  +   D  W
Sbjct: 7   DLGITAIALYDYQAAGD------DE-ISFDPDDIITNIEMIDDGW 44

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens} Length = 69

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             RA +DY A +       D  L  + GDIL V+ + +  W
Sbjct: 10  EYRALYDYTAQNP------DE-LDLSAGDILEVILEGEDGW 43

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 7/44 (15%), Positives = 15/44 (34%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S     A + +    +      +  L    GDI+ ++   +  W
Sbjct: 6   SGNTYVALYKFVPQEN------ED-LEMRPGDIITLLEDSNEDW 42

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 7/46 (15%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            +  I   A +DY A+ D      D  +SF+  DI+  +   D  W
Sbjct: 14  NDLGITAVALYDYQAAGD------DE-ISFDPDDIITNIEMIDDGW 52

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 69

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A + Y +         D  L+F +G+ + V  +D  +W
Sbjct: 10  EYIALYPYSSVEP-----GD--LTFTEGEEILVTQKDGEWW 43

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 7/42 (16%)

Query: 228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +   A +D+ A++D      +  LSF +GDIL V++++    
Sbjct: 1   MEAIAKYDFKATAD-----DE--LSFKRGDILKVLNEECDQN 35

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 7/46 (15%), Positives = 17/46 (36%), Gaps = 7/46 (15%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
                   A + +    +      +  LSF KG+ + ++ + +  W
Sbjct: 14  VLEYGEAVAQYTFKGDLE-----VE--LSFRKGEHICLIRKVNENW 52

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens} Length = 68

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 7/44 (15%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S ++++  ++++A +      ++  L+  +G+ L V+     +W
Sbjct: 6   SGLKMQVLYEFEARNP-----RE--LTVVQGEKLEVLDHSKRWW 42

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus} Length = 109

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A +DY+A +      +D  LSF KG+   +++  +  W
Sbjct: 29  IFVALYDYEARTT-----ED--LSFKKGERFQIINNTEGDW 62

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ... Length = 84

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A +DY+A+       +   LSF+KG+   ++      W
Sbjct: 8   LFVALYDYNAT-------RWTDLSFHKGEKFQILEFGPGDW 41

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A Length = 58

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            V A + +D         +D  L    GD + ++ +    W
Sbjct: 4   YVEALYQFDPQ-------QDGDLGLKPGDKVQLLEKLSPEW 37

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 7/43 (16%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD 266
           R   +  +  + Y AS        +  L+  + ++L V+   D
Sbjct: 10  RNYPLTCKVVYSYKASQP-----DE--LTIEEHEVLEVIEDGD 45

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 6/42 (14%), Positives = 12/42 (28%), Gaps = 5/42 (11%)

Query: 228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +  +A       +          L+   GDI+ V   +    
Sbjct: 2   VFAKAIQKRVPCAY-----DKTALALEVGDIVKVTRMNINGQ 38

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 6/45 (13%), Positives = 18/45 (40%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             +  V A +DY  +       ++  L+  + +   ++   + +W
Sbjct: 17  PEETVVIALYDYQTNDP-----QE--LALRRNEEYCLLDSSEIHW 54

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A Length = 64

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 222 GYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD 266
           G   +K   R  F Y  +++      D  L+F +G+I+H++S++ 
Sbjct: 1   GAMGAKEYCRTLFPYTGTNE------DE-LTFREGEIIHLISKET 38

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens} Length = 65

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           + +  F+Y   ++      D  L    GDI+ +  + +  W
Sbjct: 3   QCKVLFEYIPQNE------DE-LELKVGDIIDINEEVEEGW 36

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            V A +D+ A+        D  L   +G    ++ ++D +W
Sbjct: 4   IVVAMYDFQATEA-----HD--LRLERGQEYIILEKNDLHW 37

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 7/43 (16%), Positives = 17/43 (39%), Gaps = 6/43 (13%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD 266
                + R  +D+ A         +  L+  +G+I+ V + + 
Sbjct: 6   SGMATKARVMYDFAAEPG------NNELTVTEGEIITVTNPNV 42

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 7/41 (17%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +V     + A         D  ++  + D++ V+ Q+D + 
Sbjct: 19  QVEITKAFFAKQA------DE-VTLQQADVVLVLQQEDGWL 52

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 88

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 6/46 (13%), Positives = 12/46 (26%), Gaps = 5/46 (10%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +   +  +A                  L+   GDI+ V   +    
Sbjct: 13  QNGPVFAKAIQKRV-----PCAYDKTALALEVGDIVKVTRMNINGQ 53

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 96

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 9/41 (21%), Positives = 13/41 (31%), Gaps = 1/41 (2%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A + Y+    P     +A L    G  L+V    D   
Sbjct: 19  LCVARYSYNPFDGPN-ENPEAELPLTAGKYLYVYGDMDEDG 58

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A Length = 65

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           V A +DY   S      ++  ++  KGDIL +++  +  W
Sbjct: 4   VLALYDYQEKSP-----RE--VTMKKGDILTLLNSTNKDW 36

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 10/48 (20%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ---DDAYW 269
            S +  RA +D            D  L+F++GDIL ++ Q   +   W
Sbjct: 5   SSGLLARALYDNCPDCS------DE-LAFSRGDILTILEQHVPESEGW 45

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             A +DYDA+ D      +  L+F + D +  +   D  W
Sbjct: 3   ATAEYDYDAAED------NE-LTFVENDKIINIEFVDDDW 35

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A Length = 86

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           V A +DY+A        +D  LSF KGD + V+ +   +W
Sbjct: 28  VVALYDYEAIHH-----ED--LSFQKGDQMVVLEESGEWW 60

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D Length = 60

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             +RVRA +DYD         +   LSF  GD L  + ++D   
Sbjct: 2   KGVRVRALYDYDGQ-------EQDELSFKAGDELTKLGEEDEQG 38

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 69

 Score = 37.0 bits (86), Expect = 4e-04
 Identities = 8/38 (21%), Positives = 19/38 (50%), Gaps = 6/38 (15%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD 266
             RA +D+   +       +  ++  KGD++ ++S+ D
Sbjct: 9   FARALYDFVPENP------EMEVALKKGDLMAILSKKD 40

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 10/55 (18%), Positives = 25/55 (45%), Gaps = 8/55 (14%)

Query: 216 PADNKLGYRESKIR-VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           P DN+  ++E +   V A +DY  +       ++  L+    +  +++   + +W
Sbjct: 8   PEDNRRSFQEPEETLVIALYDYQTNDP-----QE--LALRCDEEYYLLDSSEIHW 55

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 8/41 (19%), Positives = 13/41 (31%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A   Y A         +  L   KG+ + V+ +    W
Sbjct: 9   MFVALHTYSAHRP------EE-LDLQKGEGIRVLGKYQDGW 42

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 71

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +      Y + S       D  + F KG  + V+ ++   W
Sbjct: 10  KYVTVQPYTSQSK------DE-IGFEKGVTVEVIRKNLEGW 43

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A Length = 79

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             A +DY+A ++      D  LSF+KG+   +++  +  W
Sbjct: 8   FEALYDYEARTE-----DD--LSFHKGEKFQILNSSEGDW 40

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens} Length = 69

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDA 267
           +  +A +D  A S       D  LSF KGDI+ V+ QD  
Sbjct: 4   VLAKALYDNVAESP------DE-LSFRKGDIMTVLEQDTQ 36

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S   V+  +D+ A +       +  LS  K ++L V+     +W
Sbjct: 6   SGKYVKILYDFTARNA-----NE--LSVLKDEVLEVLEDGRQWW 42

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A Length = 74

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 8/45 (17%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVS-QDDAYW 269
             +   A +D+ A++D      +  LSF +GDIL V++ + D  W
Sbjct: 8   GSMEAIAKYDFKATAD-----DE--LSFKRGDILKVLNEECDQNW 45

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A Length = 60

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 11/47 (23%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAG-LSFNKGDILHVVSQDDAY--W 269
           S  +  A + +          +++G L F KGD++ ++ + D+   W
Sbjct: 2   SSPKAVALYSFAG--------EESGDLPFRKGDVITILKKSDSQNDW 40

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus} Length = 93

 Score = 37.5 bits (87), Expect = 5e-04
 Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD 266
            +  +  RA +D+ A SD      +  +SF  GD+L++  ++ 
Sbjct: 14  EDDHVVARAEYDFVAVSD------EE-ISFRAGDMLNLALKEQ 49

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 37.1 bits (86), Expect = 6e-04
 Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +  +     F+Y A  +      D  LS  KG  + V+ +    W
Sbjct: 15  DLNMPAYVKFNYMAERE------DE-LSLIKGTKVIVMEKCSDGW 52

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 6/41 (14%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +     +Y    +         LS   G+++ V+ ++++ W
Sbjct: 10  QYVVVSNYKKQEN------SE-LSLQAGEVVDVIEKNESGW 43

>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A Length = 436

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 9/103 (8%)

Query: 119 RLPEIPQELVDDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIH 178
            L          E  T  +     S+  L       +    I +  V+ G  A ++GL  
Sbjct: 330 TLDTSTSSSASAEMITPALEGATLSDGQL------KDGGKGIKIDEVVKGSPAAQAGL-Q 382

Query: 179 VGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADNKL 221
             D +  VN   V   +  ++ K+L +    I  +++  +  +
Sbjct: 383 KDDVIIGVNRDRV--NSIAEMRKVLAAKPAIIALQIVRGNESI 423

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A Length = 62

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            V A   Y+ S D      D  L F KG+ L ++ Q   +W
Sbjct: 8   LVIALHSYEPSHD-----GD--LGFEKGEQLRILEQSGEWW 41

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 73

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 10/47 (21%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ---DDAYW 269
           S     A +++ A            LS  +GD++ + S+   D  +W
Sbjct: 6   SGGTAVARYNFAARDM------RE-LSLREGDVVRIYSRIGGDQGWW 45

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 80

 Score = 36.6 bits (85), Expect = 7e-04
 Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S    +    Y AS           LS   G ++ ++ ++ + W
Sbjct: 6   SGEIAQVTSAYVAS-------GSEQLSLAPGQLILILKKNTSGW 42

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A Length = 62

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 8/43 (18%)

Query: 228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ-DDAYW 269
           +     +DYDA  D      D  L+   G+I+  V +  +  W
Sbjct: 2   VDYIVEYDYDAVHD------DE-LTIRVGEIIRNVKKLQEEGW 37

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens} Length = 73

 Score = 36.5 bits (85), Expect = 7e-04
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 9/47 (19%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW 269
           +SK   +  F Y+A +D      D  L+  +GDI+ ++++D  D  W
Sbjct: 7   KSKDYCKVIFPYEAQND------DE-LTIKEGDIVTLINKDCIDVGW 46

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 36.5 bits (85), Expect = 7e-04
 Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S    RA + Y           +  L   +GD + V+ Q D  W
Sbjct: 6   SGTPYRAMYQYRPQ-------NEDELELREGDRVDVMQQCDDGW 42

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 80

 Score = 36.6 bits (85), Expect = 7e-04
 Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 6/40 (15%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAY 268
             RA +D+   +       +  ++  KGD++ ++S+ D  
Sbjct: 16  FARALYDFVPENP------EMEVALKKGDLMAILSKKDPL 49

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 93

 Score = 37.1 bits (86), Expect = 7e-04
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 9/46 (19%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW 269
                RA + ++A +       D  +SFN GDI+ V  +   +  W
Sbjct: 4   GSSGYRALYPFEARNH------DE-MSFNSGDIIQVDEKTVGEPGW 42

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 8/44 (18%), Positives = 14/44 (31%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S    R  F +              L    G+I+ V+ + +  W
Sbjct: 6   SGEAHRVLFGFVPE-------TKEELQVMPGNIVFVLKKGNDNW 42

>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A Length = 448

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 148 GATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE 207
           GA +    +   +VV  V  G  A + GL   GD +   N   V  K   ++ K+L S  
Sbjct: 373 GAEMSNKGKDQGVVVNNVKTGTPAAQIGL-KKGDVIIGANQQAV--KNIAELRKVLDSKP 429

Query: 208 GTITFKLIPADNKL 221
             +   +   D+ +
Sbjct: 430 SVLALNIQRGDSTI 443

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 91

 Score = 36.7 bits (85), Expect = 8e-04
 Identities = 8/43 (18%), Positives = 22/43 (51%), Gaps = 9/43 (20%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ--DDAYW 269
            V+  + + + ++     ++  L+F KG+ + V+ +  +D  W
Sbjct: 19  VVQTLYPFSSVTE-----EE--LNFEKGETMEVIEKPENDPEW 54

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A Length = 69

 Score = 36.1 bits (84), Expect = 8e-04
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 9/46 (19%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW 269
           +    +  F Y+A +D      D  L+  +GDI+ ++++D  D  W
Sbjct: 1   ASDYCKVIFPYEAQND------DE-LTIKEGDIVTLINKDCIDVGW 39

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 36.1 bits (84), Expect = 8e-04
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           R  A +D++  +D         L   +GDI+ +  +    W
Sbjct: 7   RAVALYDFEPEND-------NELRLAEGDIVFISYKHGQGW 40

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A Length = 71

 Score = 36.1 bits (84), Expect = 9e-04
 Identities = 8/43 (18%), Positives = 22/43 (51%), Gaps = 9/43 (20%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ--DDAYW 269
            V+  + + + ++     ++  L+F KG+ + V+ +  +D  W
Sbjct: 8   VVQTLYPFSSVTE-----EE--LNFEKGETMEVIEKPENDPEW 43

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A Length = 92

 Score = 36.7 bits (85), Expect = 9e-04
 Identities = 8/39 (20%), Positives = 19/39 (48%), Gaps = 6/39 (15%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDA 267
             RA +D+   +       +  ++  KGD++ ++S+ D 
Sbjct: 16  FARALYDFVPENP------EMEVALKKGDLMAILSKKDP 48

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	269
3lra_A	254	Disks large homolog 1, maguk P55 subfamily member	99.91
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	99.88
3shw_A	468	Tight junction protein ZO-1; PDZ-SH3-GUK supramodu	99.88
3tsz_A	391	Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffol	99.87
3uit_A	265	INAD-like protein, maguk P55 subfamily member 5, L	99.86
3gge_A	95	PDZ domain-containing protein GIPC2; structural ge	99.75
1r6j_A	82	Syntenin 1; PDZ, membrane protein; 0.73A {Homo sap	99.71
3o46_A	93	Maguk P55 subfamily member 7; PDZ domain, structur	99.71
1kwa_A	88	Hcask/LIN-2 protein; PDZ domain, neurexin, syndeca	99.63
2ejy_A	97	55 kDa erythrocyte membrane protein; GPC, maguk, P	99.62
1va8_A	113	Maguk P55 subfamily member 5; PDZ domain, palmitoy	99.62
2he4_A	90	Na(+)/H(+) exchange regulatory cofactor NHE-RF2; p	99.62
2iwo_A	120	Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUP	99.61
3l4f_D	132	SH3 and multiple ankyrin repeat domains protein 1;	99.61
3b76_A	118	E3 ubiquitin-protein ligase LNX; PDZ, bound ligand	99.61
1i16_A	130	Interleukin 16, LCF; cytokine, lymphocyte chemoatt	99.61
3k1r_A	192	Harmonin; protein-protein complex, alternative spl	99.6
2dc2_A	103	GOPC, golgi associated PDZ and coiled-coil motif c	99.6
2d92_A	108	INAD-like protein; PDZ domain, inadl protein, hina	99.59
2awx_A	105	Synapse associated protein 97; membrane protein, s	99.59
1g9o_A	91	NHE-RF; PDZ domain, complex, signaling protein; 1.	99.59
2byg_A	117	Channel associated protein of synapse-110; DLG2, P	99.59
1wi4_A	109	Synip, syntaxin binding protein 4; syntaxin4-inter	99.58
2fe5_A	94	Presynaptic protein SAP102; PDZ domain, DLG3, huma	99.58
2fne_A	117	Multiple PDZ domain protein; structural protein, s	99.58
2e7k_A	91	Maguk P55 subfamily member 2; PDZ domain, MPP2 pro	99.58
3i4w_A	104	Disks large homolog 4; alpha and beta protein, alt	99.58
2qg1_A	92	Multiple PDZ domain protein; MPDZ, MUPP1, structur	99.58
1n7e_A	97	AMPA receptor interacting protein GRIP; PDZ, prote	99.57
2i1n_A	102	Discs, large homolog 3; DLG3, PDZ, PDZ domain, sig	99.57
2jik_A	101	Synaptojanin-2 binding protein; transmembrane, out	99.57
1uhp_A	107	Hypothetical protein KIAA1095; PDZ domain, semapho	99.57
2vwr_A	95	Ligand of NUMB protein X 2; protein-binding, metal	99.57
1d5g_A	96	Human phosphatase HPTP1E; protein-peptide complex,	99.57
1nf3_C	128	PAR-6B; semi-CRIB motif, switch I and II, PDZ doma	99.57
3r68_A	95	Na(+)/H(+) exchange regulatory cofactor NHE-RF3; P	99.57
2r4h_A	112	Membrane-associated guanylate kinase, WW and PDZ c	99.56
1wha_A	105	KIAA0147 protein, scribble; PDZ domain, cellular s	99.56
1qav_A	90	Alpha-1 syntrophin (residues 77-171); beta-finger,	99.55
3cbz_A	108	Dishevelled-2; PDZ domain, phage derived high affi	99.55
2vsp_A	91	PDZ domain-containing protein 1; membrane, cytopla	99.55
4e34_A	87	Golgi-associated PDZ and coiled-coil motif-contai	99.55
1ihj_A	98	INAD; intermolecular disulfide bond, PDZ domain, s	99.55
2yt7_A	101	Amyloid beta A4 precursor protein-binding family A	99.55
1wf8_A	107	Neurabin-I; PDZ domain, structural genomics, NPPSF	99.55
3egg_C	170	Spinophilin; PP1, serine/threonine phosphatase, po	99.55
1v62_A	117	KIAA1719 protein; structural genomics, synaptic tr	99.55
2ego_A	96	General receptor for phosphoinositides 1- associat	99.55
2db5_A	128	INAD-like protein; PDZ domain, hinadl, PALS1- asso	99.55
1ufx_A	103	KIAA1526 protein; PDZ domain, structural genomics,	99.54
3axa_A	106	Afadin, nectin-3, protein AF-6; PDZ domain, fusion	99.54
2opg_A	98	Multiple PDZ domain protein; structural protein, s	99.54
2dkr_A	93	LIN-7 homolog B; LIN-7B, PDZ, structural genomics,	99.54
2eei_A	106	PDZ domain-containing protein 1; regulatory factor	99.53
2jil_A	97	GRIP1 protein, glutamate receptor interacting prot	99.53
2q9v_A	90	Membrane-associated guanylate kinase, WW and PDZ c	99.53
1uep_A	103	Membrane associated guanylate kinase inverted-2 (M	99.53
3nfk_A	107	Tyrosine-protein phosphatase non-receptor type 4;	99.53
1q7x_A	108	PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, str	99.53
2f5y_A	91	Regulator of G-protein signalling 3 isoform 1; PDZ	99.53
1m5z_A	91	GRIP, AMPA receptor interacting protein; six beta-	99.53
2d90_A	102	PDZ domain containing protein 1; structural genomi	99.53
2daz_A	124	INAD-like protein; PDZ domain, inadl protein, hina	99.53
2ehr_A	117	INAD-like protein; PDZ domain, inadl protein, hina	99.53
1ujd_A	117	KIAA0559 protein; PDZ domain, structural genomics,	99.53
1ueq_A	123	Membrane associated guanylate kinase inverted-2 (M	99.52
2v90_A	96	PDZ domain-containing protein 3; membrane, protein	99.52
2eno_A	120	Synaptojanin-2-binding protein; mitochondrial oute	99.52
3ngh_A	106	PDZ domain-containing protein 1; adaptor protein,	99.52
1um1_A	110	KIAA1849 protein, RSGI RUH-007; PDZ domain, human	99.52
3hpk_A	125	Protein interacting with PRKCA 1; oxidized, PDZ do	99.51
3e17_A	88	Tight junction protein ZO-2; domain swapping, alte	99.51
2i04_A	85	Membrane-associated guanylate kinase, WW and PDZ d	99.51
3qe1_A	107	Sorting nexin-27, G protein-activated inward RECT	99.51
2djt_A	104	Unnamed protein product; PDZ domain, structural ge	99.51
2kpk_A	129	Membrane-associated guanylate kinase, WW and PDZ c	99.51
2dlu_A	111	INAD-like protein; PDZ domain, inadl protein, hina	99.5
1q3o_A	109	Shank1; PDZ, GKAP, peptide binding protein; 1.80A	99.5
2o2t_A	117	Multiple PDZ domain protein; structural protein, s	99.5
1tp5_A	119	Presynaptic density protein 95; PDZ-peptide ligand	99.5
1uju_A	111	Scribble; PDZ domain, cellular signaling, structur	99.5
1v6b_A	118	Harmonin isoform A1; structural genomics, usher sy	99.49
2qkv_A	96	Inactivation-NO-after-potential D protein; PDZ dom	99.49
4amh_A	106	Disks large homolog 1; permutation, protein foldin	99.49
1wg6_A	127	Hypothetical protein (riken cDNA 2810455B10); stru	99.49
2uzc_A	88	Human pdlim5, PDZ and LIM domain 5; metal-binding,	99.49
2g5m_B	113	Neurabin-2; spinophilin, PDZ domain, CNS, synaptic	99.49
2kv8_A	83	RGS12, regulator of G-protein signaling 12; PDZ do	99.48
2koj_A	111	Partitioning defective 3 homolog; PDZ domain, stru	99.48
2dmz_A	129	INAD-like protein; PDZ domain, inadl protein, hina	99.48
1x6d_A	119	Interleukin-16; PDZ domain, lymphocyte chemoattrac	99.48
2q3g_A	89	PDZ and LIM domain protein 7; structural genomics,	99.47
1wi2_A	104	Riken cDNA 2700099C19; structural genomics, riken	99.47
2la8_A	106	Inactivation-NO-after-potential D protein, KON-TI	99.47
2dls_A	93	PDZ-rhogef, RHO guanine nucleotide exchange factor	99.47
1wfg_A	131	Regulating synaptic membrane exocytosis protein 2;	99.47
2pa1_A	87	PDZ and LIM domain protein 2; PDZ domain, structur	99.47
3gsl_A	196	Disks large homolog 4; PDZ domain, tandem, PSD-95,	99.47
2jre_A	108	C60-1 PDZ domain peptide; de novo protein; NMR {Sy	99.47
2dm8_A	116	INAD-like protein; PDZ domain, inadl protein, hina	99.46
2jxo_A	98	Ezrin-radixin-moesin-binding phosphoprotein 50; nh	99.46
2cs5_A	119	Tyrosine-protein phosphatase, non-receptor type 4;	99.46
1uew_A	114	Membrane associated guanylate kinase inverted-2 (M	99.46
3r0h_A	206	INAD, inactivation-NO-after-potential D protein; p	99.46
2csj_A	117	TJP2 protein; PDZ domain, structural genomics, NPP	99.45
3bpu_A	88	Membrane-associated guanylate kinase, WW and PDZ c	99.45
3khf_A	99	Microtubule-associated serine/threonine-protein ki	99.44
1wfv_A	103	Membrane associated guanylate kinase inverted-2; a	99.44
3soe_A	113	Membrane-associated guanylate kinase, WW and PDZ c	99.44
1rgw_A	85	ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK,	99.44
1um7_A	113	Synapse-associated protein 102; PDZ, discs large h	99.44
2gzv_A	114	PRKCA-binding protein; protein kinase C, PDZ domai	99.44
2vsv_A	109	Rhophilin-2; scaffold protein, RHO GTPase binding,	99.44
1qau_A	112	Neuronal nitric oxide synthase (residues 1-130); b	99.44
1mfg_A	95	ERB-B2 interacting protein; PDZ domain, protein-pe	99.44
2kom_A	121	Partitioning defective 3 homolog; PAR-3B, PDZ doma	99.43
1z87_A	263	Alpha-1-syntrophin; protein binding; NMR {Mus musc	99.42
2w4f_A	97	Protein LAP4; structural protein, phosphoprotein,	99.42
1y7n_A	90	Amyloid beta A4 precursor protein-binding family A	99.42
2fcf_A	103	Multiple PDZ domain protein; adaptor molecule, pro	99.42
2eeh_A	100	PDZ domain-containing protein 7; structural genomi	99.42
1x5q_A	110	LAP4 protein; PDZ domain, scribble homolog protein	99.42
2iwn_A	97	Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUP	99.42
2pkt_A	91	PDZ and LIM domain protein 1; PDZ domain, structur	99.41
1n7t_A	103	99-MER peptide of densin-180-like protein; PDZ dom	99.41
2h2b_A	107	Tight junction protein ZO-1; PDZ domain, phage der	99.41
2iwq_A	123	Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUP	99.4
2edz_A	114	PDZ domain-containing protein 1; CFTR-associated p	99.39
1wif_A	126	RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, s	99.39
2eeg_A	94	PDZ and LIM domain protein 4; PDZ domain, structur	99.39
2edp_A	100	Fragment, shroom family member 4; APX/shroom famil	99.38
3kzd_A	94	TIAM-1, T-lymphoma invasion and metastasis-inducin	99.38
1b8q_A	127	Protein (neuronal nitric oxide synthase); PDZ doma	99.38
2kjd_A	128	Sodium/hydrogen exchange regulatory cofactor NHE-	99.38
1v5q_A	122	GRIP1 homolog, glutamate receptor interacting prot	99.37
2z17_A	104	Pleckstrin homology SEC7 and coiled-coil domains-	99.37
2yuy_A	126	RHO GTPase activating protein 21; PDZ domain, stru	99.37
2lob_A	112	Golgi-associated PDZ and coiled-coil motif-contai	99.06
1whd_A	100	RGS3, regulator of G-protein signaling 3; PDZ doma	99.36
1wf7_A	103	Enigma homologue protein; PDZ domain, structural g	99.36
1vb7_A	94	PDZ and LIM domain 2; PDZ domain PDZ-LIM protein,	99.35
1uit_A	117	Human discs large 5 protein; PDZ domain, HDLG5, ma	99.34
1ujv_A	96	Membrane associated guanylate kinase inverted-2 (M	99.33
3sfj_A	104	TAX1-binding protein 3; PDZ:peptide complex, signa	99.32
2qt5_A	200	Glutamate receptor-interacting protein 1; PDZ-pept	99.32
2edv_A	96	FERM and PDZ domain-containing protein 1; cytoskel	99.32
2vz5_A	139	TAX1-binding protein 3; WNT signaling pathway, pro	99.32
1uez_A	101	KIAA1526 protein; PDZ domain, structural genomics,	99.31
1w9e_A	166	Syntenin 1; cell adhesion, adhesion/complex, PDZ d	99.31
2d8i_A	114	T-cell lymphoma invasion and metastasis 1 variant;	99.31
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	99.3
3tsv_A	124	Tight junction protein ZO-1; PDZ, scaffolding, JAM	99.3
1vae_A	111	Rhophilin 2, rhophilin, RHO GTPase binding protein	99.28
1v5l_A	103	PDZ and LIM domain 3; actinin alpha 2 associated L	99.26
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	99.26
2rcz_A	81	Tight junction protein ZO-1; PDZ, domain-swapping,	99.26
1x5n_A	114	Harmonin; PDZ domain, usher syndrome 1C protein, a	99.26
3gsl_A	196	Disks large homolog 4; PDZ domain, tandem, PSD-95,	99.25
3qik_A	101	Phosphatidylinositol 3,4,5-trisphosphate-dependen	99.25
2krg_A	216	Na(+)/H(+) exchange regulatory cofactor NHE-RF1; a	99.24
3cyy_A	92	Tight junction protein ZO-1; protein-ligand comple	99.24
2eaq_A	90	LIM domain only protein 7; conserved hypothetical	99.23
3suz_A	388	Amyloid beta A4 precursor protein-binding family 2	99.22
3r0h_A	206	INAD, inactivation-NO-after-potential D protein; p	99.22
1p1d_A	196	PDZ45, glutamate receptor interacting protein; PDZ	99.22
1uf1_A	128	KIAA1526 protein; PDZ domain, structural genomics,	99.17
1wh1_A	124	KIAA1095 protein; PDZ domain, structural genomics,	99.13
1rso_B	56	MLIN-2/CASK, peripheral plasma membrane protein CA	99.11
1y74_B	50	MLIN-2/CASK, peripheral plasma membrane protein CA	99.11
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	99.1
2qt5_A	200	Glutamate receptor-interacting protein 1; PDZ-pept	99.08
2yub_A	118	LIMK-2, LIM domain kinase 2; PDZ domain, structura	99.07
1p1d_A	196	PDZ45, glutamate receptor interacting protein; PDZ	98.96
1w9e_A	166	Syntenin 1; cell adhesion, adhesion/complex, PDZ d	98.57
3suz_A	388	Amyloid beta A4 precursor protein-binding family 2	98.54
2l97_A	134	HTRA, putative serine protease; HTRA-PDZ, protein	98.53
3i18_A	100	LMO2051 protein; alpha-beta protein, structural ge	98.51
2pzd_A	113	Serine protease HTRA2; PDZ domain, apoptosis, mito	98.5
1fc6_A	388	Photosystem II D1 protease; D1 C-terminal processi	98.49
2kjp_A	91	Uncharacterized protein YLBL; mixed alpha-beta pro	98.48
2kl1_A	94	YLBL protein; structure genomics, structural genom	98.47
3rle_A	209	Golgi reassembly-stacking protein 2; PDZ, tether,	98.44
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	98.4
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	98.37
3id1_A	95	Regulator of sigma E protease; hydrolase, cell inn	98.34
1y8t_A	324	Hypothetical protein RV0983; serine protease, stru	98.34
2p3w_A	112	Probable serine protease HTRA3; PDZ domain, phage	98.33
2i6v_A	87	General secretion pathway protein C; EPSC, GSPC, P	98.33
2zpm_A	91	Regulator of sigma E protease; metalloproteinase,	98.29
4a8c_A	436	Periplasmic PH-dependent serine endoprotease DEGQ;	98.27
4fgm_A	597	Aminopeptidase N family protein; structural genomi	98.25
4a8c_A	436	Periplasmic PH-dependent serine endoprotease DEGQ;	98.23
1te0_A	318	Protease DEGS; two domains, serine protease, PDZ,	98.2
3k50_A	403	Putative S41 protease; structural genomics, joint	98.19
2i4s_A	105	General secretion pathway protein C; EPSC, GSPC, P	98.18
3stj_A	345	Protease DEGQ; serine protease, PDZ domain, protea	98.13
1vf6_C	72	Maguk P55 subfamily member 5; L27 domain, heterodi	98.1
2hga_A	125	Conserved protein MTH1368; GFT structural genomics	98.07
3rle_A	209	Golgi reassembly-stacking protein 2; PDZ, tether,	98.06
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	98.05
1lcy_A	325	HTRA2 serine protease; apoptosis, PDZ domain, casp	98.02
3pv2_A	451	DEGQ; trypsin fold, PDZ domain, chaperone protease	98.0
3pv2_A	451	DEGQ; trypsin fold, PDZ domain, chaperone protease	97.99
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	97.97
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	97.95
3qo6_A	348	Protease DO-like 1, chloroplastic; protease, HTRA,	97.94
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	97.86
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	97.85
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	97.85
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	97.84
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	97.79
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	97.79
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	97.79
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	97.78
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	97.77
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	97.77
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	97.76
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	97.76
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	97.75
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	97.75
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	97.75
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	97.74
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	97.74
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	97.74
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	97.74
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	97.73
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	97.72
1ky9_A	448	Protease DO, DEGP, HTRA; protein quality control,	97.71
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	97.7
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	97.7
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	97.7
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	97.69
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	97.69
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	97.69
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	97.69
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	97.68
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	97.68
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	97.68
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	97.67
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	97.66
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	97.65
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	97.65
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	97.65
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	97.65
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	97.65
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	97.65
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	97.65
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	97.65
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	97.64
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	97.64
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	97.64
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	97.63
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	97.63
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	97.62
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	97.61
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	97.61
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	97.6
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	97.6
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	97.6
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	97.6
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	97.6
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	97.59
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	97.59
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	97.59
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	97.59
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	97.58
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	97.58
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	97.58
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	97.58
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	97.58
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	97.58
3u23_A	65	CD2-associated protein; structural genomics, struc	97.58
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	97.57
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	97.57
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	97.57
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	97.57
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	97.56
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	97.55
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	97.55
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	97.55
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	97.55
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	97.54
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	97.54
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	97.54
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	97.53
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	97.52
3num_A	332	Serine protease HTRA1; DEGP, hydrolase; 2.75A {Hom	97.52
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	97.52
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	97.51
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	97.51
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	97.51
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	97.51
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	97.51
1k32_A	1045	Tricorn protease; protein degradation, substrate g	97.5
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	97.5
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	97.49
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	97.49
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	97.49
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	97.49
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	97.49
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	97.48
3uit_A	265	INAD-like protein, maguk P55 subfamily member 5, L	97.48
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	97.48
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	97.48
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	97.47
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	97.47
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	97.47
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	97.47
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	97.46
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	97.45
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	97.45
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	97.45
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	97.44
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	97.44
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	97.44
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	97.44
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	97.44
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	97.44
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	97.43
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	97.43
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	97.42
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	97.42
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	97.4
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	97.4
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	97.39
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	97.39
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	97.39
1i07_A	60	Epidermal growth factor receptor kinase substrate	97.39
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	97.39
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	97.39
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	97.39
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	97.38
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	97.37
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	97.37
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	97.37
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	97.36
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	97.36
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	97.36
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	97.36
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	97.35
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	97.35
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	97.34
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	97.34
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	97.34
1ky9_A	448	Protease DO, DEGP, HTRA; protein quality control,	97.34
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	97.34
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	97.33
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	97.33
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	97.32
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	97.32
1wxb_A	68	Epidermal growth factor receptor pathway substrate	97.31
1awj_A	77	ITK; transferase, regulatory intramolecular comple	97.31
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	97.31
4fln_A	539	Protease DO-like 2, chloroplastic; protease, DEG,	97.3
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	97.3
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	97.29
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	97.28
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	97.27
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	97.26
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	97.23
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	97.23
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	97.22
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	97.2
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	97.16
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	97.14
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	97.12
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	97.1
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	97.08
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	97.07
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	96.99
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	96.85
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	96.79
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	96.76
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	96.76
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	96.74
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	96.67
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	96.25
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	96.21
4fln_A	539	Protease DO-like 2, chloroplastic; protease, DEG,	96.16
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	96.16
1u3o_A	82	Huntingtin-associated protein-interacting protein;	96.13
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	95.96
1vf6_A	83	PALS-1, PALS1-associated tight junction protein; L	95.91
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	95.83
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	95.8
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	95.64
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	95.62
3lra_A	254	Disks large homolog 1, maguk P55 subfamily member	95.5
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	94.08
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	94.87
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	94.83
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	94.53
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	93.77
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	93.72
1y74_B	50	MLIN-2/CASK, peripheral plasma membrane protein CA	93.54
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	92.61
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	93.4
1ri9_A	102	FYN-binding protein; SH3-like, helically extended,	93.39
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	93.37
3pvl_A	655	Myosin VIIA isoform 1; protein complex, novel fold	92.8
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	87.15
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	86.33

>3lra_A Disks large homolog 1, maguk P55 subfamily member protein LIN-7 homolog C; tripartite complex, L27 tetramer, cell junction; 2.95A {Homo sapiens} PDB: 1rso_A

Probab=99.91  E-value=6.8e-27  Score=203.80  Aligned_cols=138  Identities=29%  Similarity=0.480  Sum_probs=115.5

Q ss_pred             CcchhHHHHHHHHHH-hhcccccChhhHHHHHHHhcChhHHHHHhhhhccccc---cCCCccCchHHhHHHHHHHHhhcc
Q psy14174          8 EFDISVSSLLETLQE-SQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVNE---QSHPVLSNAMQISLEVLDVLLSRL   83 (269)
Q Consensus         8 ~~~~~~~~vL~~L~~-~~~~~~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~~---~~~p~~~~~~~~~~~v~~~l~~~~   83 (269)
                      ++..||++||++|.+ ++..+++ +.|++||+++|+||+|++|+|+|++|+++   ++.|+..+|.+++++|++.|+...
T Consensus        73 ~~~~gv~qVLdsL~e~L~~~~~~-d~Dl~FLk~lL~sp~L~sLlkihd~L~~~~~~~~~Pv~~~A~~La~EVle~L~~~~  151 (254)
T 3lra_A           73 GSDTGLYELLAALPAQLQPHVDS-QEDLTFLWDMFGEKSLHSLVKIHEKLHYYEKQSPVPILHGAAALADDLAEELQNKP  151 (254)
T ss_dssp             TSSSSHHHHHHTHHHHHTTTCCC-TTHHHHHHHHC---CHHHHHHHHHHHHHHHTTCCCCSCSCHHHHHHHHHHHHHTSC
T ss_pred             CccchHHHHHHHHHHhhhcccCC-cccHHHHHHHHcCHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHhhcC
Confidence            445689999999999 6666665 78999999999999999999999999984   789999999999999999999876


Q ss_pred             CCChhHHHHHHhccCchhhhhhhhcccccccccCCC-C---CCCCCCCCCCCCCceEEEEEeeCCCCCC
Q psy14174         84 ALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPR-L---PEIPQELVDDEEETVKIVQLVKSNEPLG  148 (269)
Q Consensus        84 ~~~~~~~el~~ll~~p~~~~ll~a~d~v~~~~~~~~-~---p~~p~~~~~~~~~~~r~V~l~k~~~~lG  148 (269)
                      . +++++||.+||++|||||||+|||.||++.|+|. +   ||.|.. .+.+.+.+|+|+|.|..++.|
T Consensus       152 ~-s~ea~EL~~LLs~PHfQALL~AHD~VAqk~yep~~lp~~P~~p~~-~~~~~DavRiV~LvK~~~~~g  218 (254)
T 3lra_A          152 L-NSEIRELLKLLSKPNVKALLSVHDTVAQKNYDLEVLFQGPALGEP-VRLERDICRAIELLEKLQRSG  218 (254)
T ss_dssp             C-CHHHHHHHHHTTSHHHHHHHHHHHHHHTTCCCHHHHHTHHHHCSH-HHHHHHHHHHHHHHHHHHHTT
T ss_pred             C-ChHHHHHHHHhcCHHHHHHHHHHHHHHHhhcCccccCCCCCCCCC-CCCchhHHHhhhhhhccCcCC
Confidence            5 8999999999999999999999999999999985 3   333433 334567899999988655554

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}

Probab=99.88  E-value=3.6e-22  Score=199.91  Aligned_cols=134  Identities=27%  Similarity=0.447  Sum_probs=118.3

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      ..+.|.|.|...+|||++.++....+++|.+|.+||+|+++|+|++||+|++|||+++.++++++++.+|++.++.++|+
T Consensus       307 ~~~~v~l~~~~~~lG~~i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v~L~  386 (721)
T 2xkx_A          307 EPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII  386 (721)
T ss_pred             ceEEEEEEECCCCccEEEeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEE
Confidence            57889999988899999998765569999999999999999978999999999999999999999999999999999999


Q ss_pred             EEeCCCc---------------------------CcccccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC
Q psy14174        214 LIPADNK---------------------------LGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD  266 (269)
Q Consensus       214 v~p~~~~---------------------------~~~~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d  266 (269)
                      |.+....                           .......+||||+|||++..|..+||+  ||+|++||||||+++.|
T Consensus       387 v~r~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~~~~~~~~~~~vrAl~dy~~~~d~~~p~~--~LsF~~GDil~v~~~~~  464 (721)
T 2xkx_A          387 AQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDCGFLSQ--ALSFRFGDVLHVIDAGD  464 (721)
T ss_pred             EEeCchhhhhhhhhhhhhhhhcccccccCCccccccccccceeEEEeeccCcCCCCCCccc--cccccCCCEEEEeecCC
Confidence            8764310                           012346799999999999999999955  89999999999999999


Q ss_pred             CCC
Q psy14174        267 AYW  269 (269)
Q Consensus       267 ~~W  269 (269)
                      ++|
T Consensus       465 ~~W  467 (721)
T 2xkx_A          465 EEW  467 (721)
T ss_pred             CCe
Confidence            999

>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}

Probab=99.88  E-value=2.4e-22  Score=191.31  Aligned_cols=125  Identities=24%  Similarity=0.409  Sum_probs=109.5

Q ss_pred             eEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEE
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITF  212 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l  212 (269)
                      +|+|.+.|+ ++|||++.+++. .|++|++|.+||||+++| |++||+|++|||+++.++++++++.+|+.  .++.++|
T Consensus         2 ~r~V~l~k~-~~lG~~i~gg~~-~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L   78 (468)
T 3shw_A            2 MKLVKFRKG-DSVGLRLAGGND-VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI   78 (468)
T ss_dssp             EEEEEEECC-SSCCEEEEEETT-TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEE
T ss_pred             ceEEEEecC-CccceEEEccCc-CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEE
Confidence            688999985 899999998864 689999999999999999 79999999999999999999999999998  7899999


Q ss_pred             EEEeCCCc-----CcccccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC---CCCCC
Q psy14174        213 KLIPADNK-----LGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ---DDAYW  269 (269)
Q Consensus       213 ~v~p~~~~-----~~~~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~---~d~~W  269 (269)
                      +|.+....     .......+||||+|+|++..       +.+|+|++||||||+|+   +|++|
T Consensus        79 ~V~r~g~~~~~~~~~~~g~s~yVralfdy~~~~-------~~~LsF~~GDIL~V~d~~~~~d~~w  136 (468)
T 3shw_A           79 LAQKKKDVYRRIVESDVGDSFYIRTHFEYEKES-------PYGLSFNKGEVFRVVDTLYNGKLGS  136 (468)
T ss_dssp             EEEECHHHHHHHHHHTCCCCEEEEECSCBCCSS-------TTBCCBCTTCEEEEEESSGGGCTTE
T ss_pred             EEEECCccchhhhccccccccccccccCcCCCC-------CCCceEccCCEEEEeecccCCCCCe
Confidence            99986411     11235689999999999976       46999999999999999   67777

>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A

Probab=99.87  E-value=7.8e-22  Score=184.53  Aligned_cols=127  Identities=24%  Similarity=0.404  Sum_probs=108.9

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v  210 (269)
                      +.+++|.+.|++ +|||++.++.. .|++|.+|.+||||+++| |++||+|++|||.++.++++++++.+++.  .+..+
T Consensus         8 ~~~~~v~~~k~~-~lG~~i~gg~~-~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v   84 (391)
T 3tsz_A            8 PSMKLVKFRKGD-SVGLRLAGGND-VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV   84 (391)
T ss_dssp             -CEEEEEEECCS-SCCEEEEEETT-TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEE
T ss_pred             CCcEEEEeecCC-ceeEEEEecCC-CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeE
Confidence            467888888854 69999998754 699999999999999999 69999999999999999999999999985  78899


Q ss_pred             EEEEEeCCC-----cCcccccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC---CCCCC
Q psy14174        211 TFKLIPADN-----KLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ---DDAYW  269 (269)
Q Consensus       211 ~l~v~p~~~-----~~~~~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~---~d~~W  269 (269)
                      +|++.+...     ........+||||+|||++..       +.+|+|++||||||+|+   +|++|
T Consensus        85 ~l~v~r~~~~~~~~~~~~~~~~~~vral~dy~~~~-------~~~Lsf~~Gdil~V~~~~~~~d~~w  144 (391)
T 3tsz_A           85 TILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKES-------PYGLSFNKGEVFRVVDTLYNGKLGS  144 (391)
T ss_dssp             EEEEEECHHHHGGGTSSCCSCCEEEEECSCBCCSS-------TTBCCBCTTCEEEEEESSGGGSSSE
T ss_pred             EEEEeeCCcccccccccccccccccccccccCCCC-------CCcceEccCCEEEEEeccCCCCCCe
Confidence            999998641     122345789999999999964       34999999999999999   67777

>3uit_A INAD-like protein, maguk P55 subfamily member 5, LIN-7 homolog B; L27 domain, cell polarization, cell adhesion; 2.05A {Mus musculus} PDB: 1y76_A 1y76_B 1y74_A

Probab=99.86  E-value=1.8e-22  Score=175.57  Aligned_cols=113  Identities=30%  Similarity=0.471  Sum_probs=101.9

Q ss_pred             hHHHHHHHHHHhhc-cccc-ChhhHHHHHHHhcChhHHHHHhhhhcccc----cc-CCCccCchHHhHHHHHHHHhhccC
Q psy14174         12 SVSSLLETLQESQS-TFSA-NDEELLFLSSLLQSKELNALVHVHNSIVN----EQ-SHPVLSNAMQISLEVLDVLLSRLA   84 (269)
Q Consensus        12 ~~~~vL~~L~~~~~-~~~~-~~~d~~~l~~~l~~~~~~~l~~~~~~~~~----~~-~~p~~~~~~~~~~~v~~~l~~~~~   84 (269)
                      .|++||++|++++. +.++ +++|+.||+++|++|+|++|+++|++|+.    .+ +.|+..+|.+++.||++.++. ..
T Consensus        81 ~~~qLLdSL~eI~~~L~d~~sqeDl~FL~~LLesp~L~sLlKIHerL~~~~e~~~p~~PV~~nA~eLa~EVle~L~~-~~  159 (265)
T 3uit_A           81 EIEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQNAFKIHNAITVHMNKASPPFPLISNAQDLAQEVQTVLKP-VH  159 (265)
T ss_dssp             CHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCCCCSCSCHHHHHHHHHHHHTT-TC
T ss_pred             HHHHHHHHHHHHHHHhccccccccHHHHHHHHcCHHHHHHHHHHHHHHHhcccCCCCCCCcchHHHHHHHHHHHhhc-CC
Confidence            69999999999944 4433 56799999999999999999999999954    35 899999999999999999998 44


Q ss_pred             CChhHHHHHHhccCchhhhhhhhcccccccccCCCCCCCCCC
Q psy14174         85 LNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQE  126 (269)
Q Consensus        85 ~~~~~~el~~ll~~p~~~~ll~a~d~v~~~~~~~~~p~~p~~  126 (269)
                       +++++||.+||++|||||||+|||.||+++|+|.+|+.|..
T Consensus       160 -s~ea~EL~~LLs~PHfQALL~AHD~VAqK~yeP~lP~l~~~  200 (265)
T 3uit_A          160 -HKEGQELTALLNTPHIQALLLAHDKVAEQEMGGGLEVLFQG  200 (265)
T ss_dssp             -CHHHHHHHHHHHSHHHHHHHHHHHHHHHSSSCCCGGGGGSG
T ss_pred             -ChHHHHHHHHHhCHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence             89999999999999999999999999999999998888763

>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}

Probab=99.75  E-value=1.1e-17  Score=125.98  Aligned_cols=83  Identities=35%  Similarity=0.454  Sum_probs=74.3

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC--CeE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE--GTI  210 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~--~~v  210 (269)
                      ...|.|+|.|..++|||||.++ +.+.+||++|.+||+|+++|.|++||+|++|||+++.+++|.+++++|++..  ..+
T Consensus         4 g~~k~V~l~K~~~~LG~tI~~~-g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~   82 (95)
T 3gge_A            4 GIEKEVNVYKSEDSLGLTITDN-GVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELF   82 (95)
T ss_dssp             EEEEEEEEECCSSCCCEEEECS-SSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEE
T ss_pred             CeEEEEEEEECCCCceEEEEcC-CCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEE
Confidence            3578999999889999999964 3568999999999999999999999999999999999999999999999954  577


Q ss_pred             EEEEEe
Q psy14174        211 TFKLIP  216 (269)
Q Consensus       211 ~l~v~p  216 (269)
                      +|++.+
T Consensus        83 ~L~lv~   88 (95)
T 3gge_A           83 TMKLIE   88 (95)
T ss_dssp             EEEEEE
T ss_pred             EEEEEC
Confidence            777765

>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A

Probab=99.71  E-value=5.4e-17  Score=119.36  Aligned_cols=77  Identities=26%  Similarity=0.506  Sum_probs=70.6

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      ..|.|.|+| ..++|||+++++      +|.++.+||||+++| |++||+|++|||+++.+++|++++++|+.++..|+|
T Consensus         4 ~~r~v~l~k~~~g~~Gf~i~~g------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L   76 (82)
T 1r6j_A            4 DPRTITMHKDSTGHVGFIFKNG------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI   76 (82)
T ss_dssp             CCEEEEEECCTTSCCCEEEETT------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEE
T ss_pred             ceEEEEEEECCCCCeEEEEECC------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEE
Confidence            468999999 556899999875      379999999999999 589999999999999999999999999999999999


Q ss_pred             EEEeC
Q psy14174        213 KLIPA  217 (269)
Q Consensus       213 ~v~p~  217 (269)
                      +|.|.
T Consensus        77 ~v~p~   81 (82)
T 1r6j_A           77 TIMPA   81 (82)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99984

>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0

Probab=99.71  E-value=9.3e-17  Score=120.14  Aligned_cols=87  Identities=64%  Similarity=1.055  Sum_probs=78.6

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ++.+|.|.+.|.+++|||++.++....+++|.+|.+||||+++|.|++||+|++|||.++.+.+++++..++++.++.++
T Consensus         2 ~~~~r~v~l~k~~~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~   81 (93)
T 3o46_A            2 SDSVKIIRLVKNREPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAIT   81 (93)
T ss_dssp             --CCEEEEEEESSSCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEE
T ss_pred             CccEEEEEEEeCCCCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence            46789999999888999999987545689999999999999999779999999999999999999999999999999999


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      |+|.|..
T Consensus        82 l~v~~~~   88 (93)
T 3o46_A           82 FKIIPGS   88 (93)
T ss_dssp             EEEECC-
T ss_pred             EEEEeCC
Confidence            9999864

>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1

Probab=99.63  E-value=1.7e-15  Score=112.37  Aligned_cols=84  Identities=44%  Similarity=0.800  Sum_probs=74.2

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      .+|+|+|.| .+++|||++.++. .++++|.+|.+||||++++.|++||+|++|||.++.+++++++..++++..+.++|
T Consensus         1 ~~r~V~l~K~~~~~lG~~i~~~~-~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l   79 (88)
T 1kwa_A            1 RSRLVQFQKNTDEPMGITLKMNE-LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF   79 (88)
T ss_dssp             CCEEEEEEECSSSCCCEEEECSC-GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEE
T ss_pred             CeEEEEEEeCCCCceeEEEEeCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEE
Confidence            368999999 5799999999853 35899999999999999444799999999999999999999999999988779999


Q ss_pred             EEEeCC
Q psy14174        213 KLIPAD  218 (269)
Q Consensus       213 ~v~p~~  218 (269)
                      ++.+..
T Consensus        80 ~v~r~~   85 (88)
T 1kwa_A           80 KIVPSY   85 (88)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            998854

>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A

Probab=99.62  E-value=2.7e-15  Score=113.71  Aligned_cols=83  Identities=39%  Similarity=0.744  Sum_probs=75.3

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      -+|.|.|.| .+++||+++...+ ..+++|.+|.+||||+++|+|++||+|++|||.++.+++++++..+++..++.++|
T Consensus        12 ~~~~v~l~K~~~~~lG~~l~~~~-~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L   90 (97)
T 2ejy_A           12 MVRLIQFEKVTEEPMGICLKLNE-KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISL   90 (97)
T ss_dssp             -CEEEEEEECSSSCCSEEEEECT-TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEE
T ss_pred             ccEEEEEEeCCCCCeeEEEEeCC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence            468899999 7889999998754 35899999999999999997799999999999999999999999999988889999


Q ss_pred             EEEeC
Q psy14174        213 KLIPA  217 (269)
Q Consensus       213 ~v~p~  217 (269)
                      +|.|.
T Consensus        91 ~V~~~   95 (97)
T 2ejy_A           91 KVIPN   95 (97)
T ss_dssp             EEECC
T ss_pred             EEEEC
Confidence            99985

>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.62  E-value=9.4e-15  Score=113.28  Aligned_cols=85  Identities=47%  Similarity=0.873  Sum_probs=77.2

Q ss_pred             CCceEEEEEeeC-CCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        132 EETVKIVQLVKS-NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       132 ~~~~r~V~l~k~-~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      .+.+|.|.+.|. +++|||++...  ..+++|..|.+||||+++|+|++||+|++|||+++.++++.++..+++..++.+
T Consensus        23 ~~~~~~v~l~k~~~~~lG~~i~~~--~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v  100 (113)
T 1va8_A           23 GETVKIVRIEKARDIPLGATVRNE--MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTL  100 (113)
T ss_dssp             TEECEEEEEEECTTCCCCEEEEEC--SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEE
T ss_pred             CCceEEEEEEeCCCCceeEEEEeC--CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence            467899999995 45999999887  468999999999999999976999999999999999999999999999888899


Q ss_pred             EEEEEeCC
Q psy14174        211 TFKLIPAD  218 (269)
Q Consensus       211 ~l~v~p~~  218 (269)
                      +|+|.+..
T Consensus       101 ~l~v~r~~  108 (113)
T 1va8_A          101 TFVLIPSS  108 (113)
T ss_dssp             EEEEECCC
T ss_pred             EEEEEECC
Confidence            99999864

>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A

Probab=99.62  E-value=6.2e-15  Score=109.37  Aligned_cols=85  Identities=25%  Similarity=0.381  Sum_probs=77.5

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      ...|.|.+.|+..+|||++.++....+++|..|.+||||+++| |++||+|++|||.++.+.++.++..+++..+..+.|
T Consensus         3 ~~~r~v~l~k~~~g~G~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l   81 (90)
T 2he4_A            3 LRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARL   81 (90)
T ss_dssp             TCCEEEEEECBTTBCCEEEEECSSSSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEE
T ss_pred             CCcEEEEEEECCCCccEEEEccCCCCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEE
Confidence            4568999999888999999988655689999999999999999 699999999999999999999999999988899999


Q ss_pred             EEEeCC
Q psy14174        213 KLIPAD  218 (269)
Q Consensus       213 ~v~p~~  218 (269)
                      ++.+.+
T Consensus        82 ~v~r~~   87 (90)
T 2he4_A           82 LVVGPS   87 (90)
T ss_dssp             EEECCC
T ss_pred             EEEccC
Confidence            998753

>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A

Probab=99.61  E-value=2.2e-15  Score=118.33  Aligned_cols=88  Identities=22%  Similarity=0.427  Sum_probs=73.9

Q ss_pred             CCCceEEEEEee-CCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        131 EEETVKIVQLVK-SNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       131 ~~~~~r~V~l~k-~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      ....+|.|.|.| .+++|||+|.++.+    ..+++|.+|.+||||+++|.|++||+|++|||.++.++++.+++.+++.
T Consensus        21 ~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~  100 (120)
T 2iwo_A           21 QSMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKN  100 (120)
T ss_dssp             ----CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred             CCCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence            445678999999 55699999998743    3489999999999999994479999999999999999999999999999


Q ss_pred             CCCeEEEEEEeCC
Q psy14174        206 SEGTITFKLIPAD  218 (269)
Q Consensus       206 ~~~~v~l~v~p~~  218 (269)
                      .++.++|+|.+..
T Consensus       101 ~~~~v~l~v~r~g  113 (120)
T 2iwo_A          101 ASGSIEMQVVAGG  113 (120)
T ss_dssp             CCSEEEEEEECCT
T ss_pred             CCCeEEEEEEECC
Confidence            9999999999864

>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}

Probab=99.61  E-value=5.9e-15  Score=117.77  Aligned_cols=84  Identities=27%  Similarity=0.378  Sum_probs=75.7

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCCCC-------------cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHH
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEESG-------------KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDV  199 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~~~-------------~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~  199 (269)
                      ..|.|.|.| +.++|||+|+++....             +++|.+|.+||+|+++| |++||+|++|||+++.++++.++
T Consensus        27 ~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~  105 (132)
T 3l4f_D           27 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV  105 (132)
T ss_dssp             CCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHH
T ss_pred             CCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence            457889999 6789999999985422             69999999999999999 79999999999999999999999


Q ss_pred             HHHHHcCCCeEEEEEEeCC
Q psy14174        200 LKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       200 ~~~l~~~~~~v~l~v~p~~  218 (269)
                      +.++++.+..+.|+|.+..
T Consensus       106 ~~~l~~~g~~v~l~v~~~~  124 (132)
T 3l4f_D          106 VNMIRQGGNTLMVKVVMVT  124 (132)
T ss_dssp             HHHHHHTTTEEEEEEECCC
T ss_pred             HHHHHcCCCEEEEEEEECC
Confidence            9999999999999998854

>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}

Probab=99.61  E-value=5.5e-15  Score=115.81  Aligned_cols=85  Identities=26%  Similarity=0.435  Sum_probs=76.8

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      ...|.|.+.| .+.+|||+|.++..    ..+++|.+|.+||+|+++|+|++||+|++|||+++.++++.+++.++++.+
T Consensus        23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~  102 (118)
T 3b76_A           23 MHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTS  102 (118)
T ss_dssp             EEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCC
T ss_pred             CCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence            4578899999 46899999998842    348999999999999999977999999999999999999999999999999


Q ss_pred             CeEEEEEEeC
Q psy14174        208 GTITFKLIPA  217 (269)
Q Consensus       208 ~~v~l~v~p~  217 (269)
                      +.++|+|.+.
T Consensus       103 ~~v~L~v~R~  112 (118)
T 3b76_A          103 SSIVLKALEV  112 (118)
T ss_dssp             SEEEEEEEEE
T ss_pred             CeEEEEEEEC
Confidence            9999999874

>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2

Probab=99.61  E-value=3.8e-15  Score=118.48  Aligned_cols=87  Identities=23%  Similarity=0.392  Sum_probs=76.9

Q ss_pred             CCCceEEEEEeeCCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        131 EEETVKIVQLVKSNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       131 ~~~~~r~V~l~k~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      .+..++.|.|.|...+|||+|.++.+    ..+++|.+|.+||+|+++|.|++||+|++|||+++.+++|++++.+|+..
T Consensus        26 ~~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~  105 (130)
T 1i16_A           26 AEATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL  105 (130)
T ss_dssp             SSEEEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS
T ss_pred             CCCcEEEEEEEcCCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence            45678889999988899999999864    35899999999999999944799999999999999999999999999998


Q ss_pred             CC-eEEEEEEeC
Q psy14174        207 EG-TITFKLIPA  217 (269)
Q Consensus       207 ~~-~v~l~v~p~  217 (269)
                      ++ .+.|+|.+.
T Consensus       106 ~~~~v~l~v~r~  117 (130)
T 1i16_A          106 PDGPVTIVIRRK  117 (130)
T ss_dssp             CSSEEEEEEEEE
T ss_pred             CCceEEEEEEeC
Confidence            65 589998874

>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A

Probab=99.60  E-value=3.8e-15  Score=126.00  Aligned_cols=143  Identities=21%  Similarity=0.347  Sum_probs=108.3

Q ss_pred             HhHHHHHHHHhhccCCChhHHHHHHhccCchhhhhhhhcccccccccCCCCCCCCCCCCCCCCCceEEEEEee-CCCCCC
Q psy14174         70 QISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYYPRLPEIPQELVDDEEETVKIVQLVK-SNEPLG  148 (269)
Q Consensus        70 ~~~~~v~~~l~~~~~~~~~~~el~~ll~~p~~~~ll~a~d~v~~~~~~~~~p~~p~~~~~~~~~~~r~V~l~k-~~~~lG  148 (269)
                      +...+++..+........-+.+|..++.+|+...++.+...+.........   ... .+.....++.|.+.| ++.+||
T Consensus        24 ~~l~~~L~~~~~~~~v~~l~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~v~l~k~~~~~lG   99 (192)
T 3k1r_A           24 DYLYDVLRMYHQTMDVAVLVGDLKLVINEPSRLPLFDAIRPLIPLKHQVEY---DQL-TPRRSRKLKEVRLDRLHPEGLG   99 (192)
T ss_dssp             HHHHHHHHHHHHHCCHHHHHHHHTTTCCSGGGTHHHHHHGGGSCGGGHHHH---HHH-SCCCCSSCEEEEEETTSTTCCC
T ss_pred             HHHHHHHHHHhhcCCHHHHHHHHHhhcCCccccccchhhhhccCccccccc---ccc-CCCCCCceEEEEEEeCCCCcee
Confidence            445566666665554356667788899999988888776655322111000   000 122234578899999 588999


Q ss_pred             eEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        149 ATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       149 ~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      |++.++.. ..+++|..|.+||||+++| |++||+|++|||.++.++++.++..+++. +..+.|+|.+.+
T Consensus       100 ~~i~~~~~~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v~l~v~r~g  168 (192)
T 3k1r_A          100 LSVRGGLEFGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-EKTVSIKVRHIG  168 (192)
T ss_dssp             EEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-SSEEEEEEEECC
T ss_pred             EEEEcccccCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-CCeEEEEEEECC
Confidence            99988743 3489999999999999999 79999999999999999999999999988 999999999865

>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}

Probab=99.60  E-value=9.3e-15  Score=111.48  Aligned_cols=85  Identities=32%  Similarity=0.581  Sum_probs=75.9

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhc-CCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRS-GLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~-GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      ..++.|.+.| .+.+|||++.++... .+++|.+|.+||||+++ | |++||+|++|||.++.++++.+++.+++..++.
T Consensus         8 ~~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~   86 (103)
T 2dc2_A            8 GPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE   86 (103)
T ss_dssp             -CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHHHHHCCSE
T ss_pred             CCcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence            4568888988 678999999987543 38999999999999996 7 799999999999999999999999999999999


Q ss_pred             EEEEEEeCC
Q psy14174        210 ITFKLIPAD  218 (269)
Q Consensus       210 v~l~v~p~~  218 (269)
                      ++|++.+..
T Consensus        87 v~l~v~~~~   95 (103)
T 2dc2_A           87 IEFEVVYVA   95 (103)
T ss_dssp             EEEEEEECC
T ss_pred             EEEEEEecC
Confidence            999999865

>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}

Probab=99.59  E-value=1.1e-14  Score=111.99  Aligned_cols=86  Identities=28%  Similarity=0.455  Sum_probs=76.5

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC-----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE-----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~-----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      ...++.|.|.|.+.+|||+|+++..     ..+++|.+|.+||||+++|.|++||+|++|||+++.++++++++.+++..
T Consensus        13 ~~~~~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~   92 (108)
T 2d92_A           13 SPEVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV   92 (108)
T ss_dssp             CSSCEEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred             CCceEEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence            4567899999988899999998642     35899999999999999997799999999999999999999999999985


Q ss_pred             -CCeEEEEEEeC
Q psy14174        207 -EGTITFKLIPA  217 (269)
Q Consensus       207 -~~~v~l~v~p~  217 (269)
                       ++.++|+|.+.
T Consensus        93 ~~~~v~l~v~R~  104 (108)
T 2d92_A           93 PPGLVHLGICSG  104 (108)
T ss_dssp             CSEEEEEEEECC
T ss_pred             CCCeEEEEEEcC
Confidence             57899999874

>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A

Probab=99.59  E-value=1.2e-14  Score=111.03  Aligned_cols=86  Identities=24%  Similarity=0.470  Sum_probs=77.2

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      +.++.|.|.|+..+|||++.++.+      ..+++|..|.+||||+++|.|++||+|++|||.++.+.++.++...++..
T Consensus         2 e~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~   81 (105)
T 2awx_A            2 EKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT   81 (105)
T ss_dssp             -CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC
T ss_pred             CeEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence            567889999977899999998743      24899999999999999997799999999999999999999999999999


Q ss_pred             CCeEEEEEEeCC
Q psy14174        207 EGTITFKLIPAD  218 (269)
Q Consensus       207 ~~~v~l~v~p~~  218 (269)
                      +..+.|+|.+..
T Consensus        82 ~~~v~l~v~R~~   93 (105)
T 2awx_A           82 SDFVYLKVAKPT   93 (105)
T ss_dssp             CSEEEEEEECCC
T ss_pred             CCeEEEEEEcCC
Confidence            999999998864

>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A

Probab=99.59  E-value=1.6e-14  Score=107.27  Aligned_cols=82  Identities=22%  Similarity=0.351  Sum_probs=74.5

Q ss_pred             eEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      +|.|.|.|++.+|||++.++.+..+++|..|.+||||+++| |++||+|++|||.++.++++.++..+++..++.+.+.+
T Consensus         4 ~r~v~l~r~~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~   82 (91)
T 1g9o_A            4 PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLV   82 (91)
T ss_dssp             CEEEEEECBTTBCCEEEEECTTCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred             cEEEEEEeCCCcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEE
Confidence            58899999888999999988655699999999999999999 79999999999999999999999999999888887777


Q ss_pred             EeC
Q psy14174        215 IPA  217 (269)
Q Consensus       215 ~p~  217 (269)
                      .+.
T Consensus        83 ~~r   85 (91)
T 1g9o_A           83 VDP   85 (91)
T ss_dssp             ECC
T ss_pred             EcC
Confidence            653

>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1

Probab=99.59  E-value=1.1e-14  Score=113.75  Aligned_cols=86  Identities=28%  Similarity=0.432  Sum_probs=77.4

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      .+.++.|.+.|+..+|||+|.++.+      ..+++|.+|.+||||+++|.|++||+|++|||+++.++++.+++.++++
T Consensus        22 ~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~  101 (117)
T 2byg_A           22 SMTVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN  101 (117)
T ss_dssp             EEEEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred             CCceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence            4567889999977999999998642      3489999999999999999779999999999999999999999999999


Q ss_pred             CCCeEEEEEEeC
Q psy14174        206 SEGTITFKLIPA  217 (269)
Q Consensus       206 ~~~~v~l~v~p~  217 (269)
                      .+..++|+|.+.
T Consensus       102 ~g~~v~l~v~R~  113 (117)
T 2byg_A          102 TSEVVYLKVGKP  113 (117)
T ss_dssp             CCSEEEEEEEEE
T ss_pred             CCCeEEEEEEeC
Confidence            999999999874

>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.58  E-value=2.1e-14  Score=110.74  Aligned_cols=87  Identities=16%  Similarity=0.328  Sum_probs=75.7

Q ss_pred             CCCceEEEEEeeCCCCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        131 EEETVKIVQLVKSNEPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       131 ~~~~~r~V~l~k~~~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      ..+.++.|.+.|+ .+|||+|.++.+   ..+++|.+|.+||+|+++|+|++||+|++|||+++.+++|++++.+|++..
T Consensus        12 ~~~~~~~v~l~k~-~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~   90 (109)
T 1wi4_A           12 RDPAFRVITVTKE-TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK   90 (109)
T ss_dssp             CCTTEEEEEECCS-SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred             CCCcEEEEEEeCC-CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence            4567899999886 799999998743   237999999999999999978999999999999999999999999998765


Q ss_pred             ----CeEEEEEEeCC
Q psy14174        208 ----GTITFKLIPAD  218 (269)
Q Consensus       208 ----~~v~l~v~p~~  218 (269)
                          ..+++.+.+..
T Consensus        91 ~r~~~~~~l~v~R~~  105 (109)
T 1wi4_A           91 LRSESPWEIAFIRSG  105 (109)
T ss_dssp             CSSSSCEEEEEECCC
T ss_pred             cCCCceEEEEEEeCC
Confidence                67788888753

>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A

Probab=99.58  E-value=2.2e-14  Score=107.04  Aligned_cols=84  Identities=24%  Similarity=0.446  Sum_probs=75.4

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      .++.|.|.|.+.+|||++.++.+      ..+++|..|.+||||+++|.|++||+|++|||.++.++++.++..+++..+
T Consensus         3 ~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~   82 (94)
T 2fe5_A            3 TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS   82 (94)
T ss_dssp             CEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC
T ss_pred             EEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence            46889999988899999998642      248999999999999999967999999999999999999999999999888


Q ss_pred             CeEEEEEEeC
Q psy14174        208 GTITFKLIPA  217 (269)
Q Consensus       208 ~~v~l~v~p~  217 (269)
                      +.+.|+|.+.
T Consensus        83 ~~v~l~v~R~   92 (94)
T 2fe5_A           83 DMVYLKVAKP   92 (94)
T ss_dssp             SEEEEEEECC
T ss_pred             CeEEEEEEcC
Confidence            8999999764

>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1

Probab=99.58  E-value=7.8e-15  Score=114.66  Aligned_cols=87  Identities=30%  Similarity=0.457  Sum_probs=77.9

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      ...+|.|.|.|+..+|||+++++.+    ..+++|.+|.+||||+++|.|++||+|++|||.++.++++.+++.+++..+
T Consensus        23 ~~~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~  102 (117)
T 2fne_A           23 MPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK  102 (117)
T ss_dssp             CCEEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred             CCccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence            3467889999988999999998742    248999999999999999977999999999999999999999999999988


Q ss_pred             CeEEEEEEeCC
Q psy14174        208 GTITFKLIPAD  218 (269)
Q Consensus       208 ~~v~l~v~p~~  218 (269)
                      +.++|+|.+..
T Consensus       103 ~~v~l~v~R~g  113 (117)
T 2fne_A          103 GTVTLMVLSSD  113 (117)
T ss_dssp             SSEEEEEEECS
T ss_pred             CeEEEEEEeCC
Confidence            89999998854

>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=4.1e-15  Score=111.03  Aligned_cols=85  Identities=34%  Similarity=0.705  Sum_probs=76.5

Q ss_pred             CCCceEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        131 EEETVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       131 ~~~~~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      +++.+|+|.|.| .+.+|||++.+.  ..+++|.+|.++|||+++|.|++||+|++|||.++ +.+++++..+++..++.
T Consensus         3 ~~~~~r~v~l~k~~~~~lG~~i~~~--~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~   79 (91)
T 2e7k_A            3 SGSSGRMVGIRKTAGEHLGVTFRVE--GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGS   79 (91)
T ss_dssp             CCCCSCBCCBCCCTTCCCCEEEEES--SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSS
T ss_pred             CCCCcEEEEEEECCCCcEeEEEEec--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCe
Confidence            346778899988 788999999985  46899999999999999987799999999999999 99999999999998899


Q ss_pred             EEEEEEeCC
Q psy14174        210 ITFKLIPAD  218 (269)
Q Consensus       210 v~l~v~p~~  218 (269)
                      ++|+|.+..
T Consensus        80 v~l~v~~~~   88 (91)
T 2e7k_A           80 VILKILSGP   88 (91)
T ss_dssp             BCEEEECCS
T ss_pred             EEEEEEECC
Confidence            999999853

>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A

Probab=99.58  E-value=2e-14  Score=109.25  Aligned_cols=85  Identities=22%  Similarity=0.359  Sum_probs=77.3

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      ..++.|.+.|.+.+|||++.++....+++|..|.+||||+++|.|++||+|++|||.++.+.++.++..+++..+..++|
T Consensus        10 ~~~~~v~l~k~~~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l   89 (104)
T 3i4w_A           10 REPRRIVIHRGSTGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTI   89 (104)
T ss_dssp             SSCEEEEEECBTTBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEE
T ss_pred             CccEEEEEEeCCCccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence            45688999998889999999986555999999999999999996699999999999999999999999999999999999


Q ss_pred             EEEeC
Q psy14174        213 KLIPA  217 (269)
Q Consensus       213 ~v~p~  217 (269)
                      ++.+.
T Consensus        90 ~v~r~   94 (104)
T 3i4w_A           90 IAQYK   94 (104)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            99875

>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}

Probab=99.58  E-value=2e-14  Score=106.90  Aligned_cols=85  Identities=28%  Similarity=0.427  Sum_probs=76.5

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      ..+.|.|.| .+.+|||++.++.+..+++|..|.+||||+++|.|++||+|++|||+++.+.++.++..+++..++.+.|
T Consensus         4 ~~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l   83 (92)
T 2qg1_A            4 DTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTL   83 (92)
T ss_dssp             CEEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEE
T ss_pred             eEEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence            356788998 6789999999876566999999999999999996799999999999999999999999999989999999


Q ss_pred             EEEeCC
Q psy14174        213 KLIPAD  218 (269)
Q Consensus       213 ~v~p~~  218 (269)
                      +|.+..
T Consensus        84 ~v~R~~   89 (92)
T 2qg1_A           84 EVGRIS   89 (92)
T ss_dssp             EEECCC
T ss_pred             EEEccc
Confidence            998753

>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A

Probab=99.57  E-value=4.1e-14  Score=106.42  Aligned_cols=86  Identities=31%  Similarity=0.582  Sum_probs=76.8

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ..++.|.+.|.+++|||++.++... .+++|..|.+||||+++|.|++||+|++|||+++.++++.++..+++..+..+.
T Consensus         4 ~~~~~v~l~~~~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~   83 (97)
T 1n7e_A            4 AIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVT   83 (97)
T ss_dssp             CCEEEEEEECTTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred             ceEEEEEEEeCCCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence            4577889988888899999987432 589999999999999999669999999999999999999999999998889999


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      |+|.+..
T Consensus        84 l~v~R~~   90 (97)
T 1n7e_A           84 LKIKKQT   90 (97)
T ss_dssp             EEEECCC
T ss_pred             EEEEeCC
Confidence            9998864

>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A

Probab=99.57  E-value=2.2e-14  Score=108.83  Aligned_cols=85  Identities=21%  Similarity=0.325  Sum_probs=76.8

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      .++.|.|.|++.+|||++.++.+      ..+++|..|.+||||+++|.|++||+|++|||.++.++++.++..+++..+
T Consensus         4 ~~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g   83 (102)
T 2i1n_A            4 KYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAG   83 (102)
T ss_dssp             EEEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred             eEEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence            46788999988899999998643      359999999999999999977999999999999999999999999999999


Q ss_pred             CeEEEEEEeCC
Q psy14174        208 GTITFKLIPAD  218 (269)
Q Consensus       208 ~~v~l~v~p~~  218 (269)
                      ..+.|+|.+..
T Consensus        84 ~~v~l~v~R~~   94 (102)
T 2i1n_A           84 PVVRLVVRRRQ   94 (102)
T ss_dssp             SEEEEEEEEEC
T ss_pred             CeEEEEEEeCC
Confidence            99999998854

>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A

Probab=99.57  E-value=2.5e-14  Score=108.30  Aligned_cols=86  Identities=21%  Similarity=0.349  Sum_probs=77.1

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      ..++.|.|.|+..+|||++.++.+      ..+++|..|.+||+|+++|.|++||+|++|||+++.++++.++..+++..
T Consensus         6 ~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~   85 (101)
T 2jik_A            6 VTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA   85 (101)
T ss_dssp             EEEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred             CccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence            457889999977999999998743      35899999999999999996799999999999999999999999999988


Q ss_pred             CCeEEEEEEeCC
Q psy14174        207 EGTITFKLIPAD  218 (269)
Q Consensus       207 ~~~v~l~v~p~~  218 (269)
                      +..+.|+|.+..
T Consensus        86 g~~v~l~v~R~~   97 (101)
T 2jik_A           86 GYAVSLRVQHRL   97 (101)
T ss_dssp             CSEEEEEEEEES
T ss_pred             CCeEEEEEEeCC
Confidence            889999998743

>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.57  E-value=3.9e-14  Score=108.50  Aligned_cols=88  Identities=19%  Similarity=0.355  Sum_probs=77.7

Q ss_pred             CCCceEEEEEeeCCCCCCeEEeccCC---------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHH
Q psy14174        131 EEETVKIVQLVKSNEPLGATIKTDEE---------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLK  201 (269)
Q Consensus       131 ~~~~~r~V~l~k~~~~lG~ti~~~~~---------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~  201 (269)
                      .+...+.|.|.|...+|||+|+++..         ..+++|.+|.++|||+++|.|++||+|++|||+++.++++.+++.
T Consensus         5 ~~~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~   84 (107)
T 1uhp_A            5 SSGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVE   84 (107)
T ss_dssp             CSSEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHH
T ss_pred             cCcEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence            34567889999988999999998642         358999999999999999337999999999999999999999999


Q ss_pred             HHHcCCCeEEEEEEeCC
Q psy14174        202 ILQSSEGTITFKLIPAD  218 (269)
Q Consensus       202 ~l~~~~~~v~l~v~p~~  218 (269)
                      +++..+..+.|+|.+..
T Consensus        85 ~~~~~~~~v~l~v~R~~  101 (107)
T 1uhp_A           85 AFKTAKEPIVVQVLRRT  101 (107)
T ss_dssp             HHHHCCSSEEEEEEECC
T ss_pred             HHHcCCCcEEEEEEeCC
Confidence            99999999999998754

>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}

Probab=99.57  E-value=3.2e-14  Score=106.50  Aligned_cols=85  Identities=24%  Similarity=0.388  Sum_probs=76.0

Q ss_pred             ceEEEEEee--CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        134 TVKIVQLVK--SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k--~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      .+..|.|.|  .+.+|||++.++....+++|..|.+||||+++|.|++||+|++|||.++.+.++.++...++..+..+.
T Consensus         3 ~~~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~   82 (95)
T 2vwr_A            3 EILQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVN   82 (95)
T ss_dssp             EEEEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred             EEEEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence            356688998  457899999987666799999999999999999779999999999999999999999999998999999


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      |++.+..
T Consensus        83 l~v~R~~   89 (95)
T 2vwr_A           83 LTIARPG   89 (95)
T ss_dssp             EEEEEES
T ss_pred             EEEEcCC
Confidence            9998853

>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A

Probab=99.57  E-value=4.8e-14  Score=105.69  Aligned_cols=86  Identities=30%  Similarity=0.484  Sum_probs=76.8

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ...+.|.|.|.+.+|||++.++..    ..+++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++..+.
T Consensus         4 g~~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~   83 (96)
T 1d5g_A            4 GDIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQ   83 (96)
T ss_dssp             TCEEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCS
T ss_pred             CCEEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence            456778999988999999998743    2489999999999999999669999999999999999999999999999889


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .+.|+|.+..
T Consensus        84 ~v~l~v~R~~   93 (96)
T 1d5g_A           84 VVHLLLEKGQ   93 (96)
T ss_dssp             EEEEEEECCS
T ss_pred             eEEEEEEcCC
Confidence            9999998753

>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A

Probab=99.57  E-value=1.5e-14  Score=114.63  Aligned_cols=89  Identities=35%  Similarity=0.540  Sum_probs=78.6

Q ss_pred             CCCCceEEEEEeeC--CCCCCeEEeccCC----------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChH
Q psy14174        130 DEEETVKIVQLVKS--NEPLGATIKTDEE----------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPG  197 (269)
Q Consensus       130 ~~~~~~r~V~l~k~--~~~lG~ti~~~~~----------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~  197 (269)
                      ..++.+|.|.+.|.  +++|||++.++..          ..+++|.+|.+||||+++|+|++||+|++|||.++.+.++.
T Consensus        25 ~~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~  104 (128)
T 1nf3_C           25 ILPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLD  104 (128)
T ss_dssp             TSCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHH
T ss_pred             cCCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence            34567899999995  6899999987632          23799999999999999997799999999999999999999


Q ss_pred             HHHHHHHcCCCeEEEEEEeCC
Q psy14174        198 DVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       198 ~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      +++.+++..++.++|+|.+..
T Consensus       105 ~~~~~l~~~~~~v~l~v~r~~  125 (128)
T 1nf3_C          105 QVTDMMIANSRNLIITVRPAN  125 (128)
T ss_dssp             HHHHHHHHTTTSEEEEEECCC
T ss_pred             HHHHHHHcCCCeEEEEEEECC
Confidence            999999999999999999864

>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*

Probab=99.57  E-value=2.2e-14  Score=107.23  Aligned_cols=84  Identities=19%  Similarity=0.353  Sum_probs=75.3

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      ..|.|.+.|++.+|||++.++....+++|..|.+||||+++| |++||+|++|||.++.++++.++..+++..++.+.++
T Consensus         5 ~~r~v~l~~~~~~~G~~l~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~   83 (95)
T 3r68_A            5 QPRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLL   83 (95)
T ss_dssp             CCEEEEEECBTTBCSCEEEEC--CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEE
T ss_pred             CcEEEEEecCCCcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence            458899999889999999987544599999999999999999 7999999999999999999999999999999999988


Q ss_pred             EEeCC
Q psy14174        214 LIPAD  218 (269)
Q Consensus       214 v~p~~  218 (269)
                      +.+..
T Consensus        84 ~~r~~   88 (95)
T 3r68_A           84 VLDKE   88 (95)
T ss_dssp             EEECC
T ss_pred             EECCc
Confidence            87754

>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}

Probab=99.56  E-value=3.2e-14  Score=110.07  Aligned_cols=87  Identities=21%  Similarity=0.404  Sum_probs=76.6

Q ss_pred             CCCceEEEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        131 EEETVKIVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       131 ~~~~~r~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      +...++.|.+.|+..+|||++.++.. ..+++|..|.+||||+++|.|++||+|++|||+++.++++.++..+++..+..
T Consensus        21 ~~~~~~~v~l~~~~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~  100 (112)
T 2r4h_A           21 QSMDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRR  100 (112)
T ss_dssp             --CCEEEEEEECBTTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred             CCCceEEEEEEcCCCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence            34567889999988899999998742 35899999999999999996699999999999999999999999999988999


Q ss_pred             EEEEEEeC
Q psy14174        210 ITFKLIPA  217 (269)
Q Consensus       210 v~l~v~p~  217 (269)
                      +.|+|.+.
T Consensus       101 v~l~v~R~  108 (112)
T 2r4h_A          101 VRLFLKRG  108 (112)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEEeC
Confidence            99999874

>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.56  E-value=3.4e-14  Score=108.45  Aligned_cols=85  Identities=29%  Similarity=0.484  Sum_probs=76.2

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCC-------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEE-------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~-------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      ....|.|.|...+|||+|.++.+       ..+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..
T Consensus         7 ~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~   86 (105)
T 1wha_A            7 GRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA   86 (105)
T ss_dssp             EEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC
T ss_pred             eeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence            45667889988899999998754       35899999999999999996799999999999999999999999999988


Q ss_pred             CCeEEEEEEeCC
Q psy14174        207 EGTITFKLIPAD  218 (269)
Q Consensus       207 ~~~v~l~v~p~~  218 (269)
                      +..+.|+|.+..
T Consensus        87 g~~v~l~v~R~~   98 (105)
T 1wha_A           87 SPTIALLLEREA   98 (105)
T ss_dssp             CSCEEEEEEECC
T ss_pred             CCeEEEEEEECC
Confidence            899999998854

>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A

Probab=99.55  E-value=4.7e-14  Score=104.58  Aligned_cols=83  Identities=24%  Similarity=0.403  Sum_probs=74.3

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ..+.|.+.| .+.+|||++.++.. ..+++|..|.++|||+++|.|++||+|++|||.++.++++.++..+++..+..++
T Consensus         4 ~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v~   83 (90)
T 1qav_A            4 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVV   83 (90)
T ss_dssp             SCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred             ccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence            468899999 78899999998743 3489999999999999993379999999999999999999999999999999999


Q ss_pred             EEEEe
Q psy14174        212 FKLIP  216 (269)
Q Consensus       212 l~v~p  216 (269)
                      |+|.+
T Consensus        84 l~v~r   88 (90)
T 1qav_A           84 LEVKY   88 (90)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            99876

>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A

Probab=99.55  E-value=1.9e-14  Score=110.69  Aligned_cols=85  Identities=27%  Similarity=0.457  Sum_probs=75.5

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC---
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS---  206 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~---  206 (269)
                      .++.|.|.| .+.+|||++.++..   ..+++|.+|.+||||+++|+|++||+|++|||+++.++++++++.+++..   
T Consensus         5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~   84 (108)
T 3cbz_A            5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHK   84 (108)
T ss_dssp             CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTS
T ss_pred             eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccC
Confidence            467889998 77899999998742   35899999999999999997799999999999999999999999999876   


Q ss_pred             CCeEEEEEEeCC
Q psy14174        207 EGTITFKLIPAD  218 (269)
Q Consensus       207 ~~~v~l~v~p~~  218 (269)
                      ++.++|+|.+..
T Consensus        85 ~~~v~l~v~R~~   96 (108)
T 3cbz_A           85 PGPIVLTVAKSG   96 (108)
T ss_dssp             SSCEEEEEECCC
T ss_pred             CCeEEEEEEeCC
Confidence            567999998854

>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A

Probab=99.55  E-value=9.8e-15  Score=108.58  Aligned_cols=84  Identities=26%  Similarity=0.347  Sum_probs=74.5

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      ..|+|.|.|+..+|||++.+..+..+++|..|.+||||+++| |++||+|++|||+++.++++.++..+++..+..+.|+
T Consensus         3 ~pr~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~   81 (91)
T 2vsp_A            3 KPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLL   81 (91)
T ss_dssp             CEEEEEEECBTTBTSCCCBCCTTCSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEE
T ss_pred             CcEEEEEEeCCCcccEEEEeccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence            568999999777999999887655689999999999999999 6999999999999999999999999999888899999


Q ss_pred             EEeCC
Q psy14174        214 LIPAD  218 (269)
Q Consensus       214 v~p~~  218 (269)
                      |.+.+
T Consensus        82 v~r~~   86 (91)
T 2vsp_A           82 VCGKK   86 (91)
T ss_dssp             EEC--
T ss_pred             EEeCC
Confidence            98754

>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A

Probab=99.55  E-value=3.6e-14  Score=104.46  Aligned_cols=82  Identities=33%  Similarity=0.608  Sum_probs=72.6

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhh-cCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADR-SGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r-~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      .++.|.|.| .+++|||++.++... .+++|.+|.+||||++ +| |++||+|++|||.++.++++.+++.+++++++.+
T Consensus         2 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v   80 (87)
T 4e34_A            2 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEI   80 (87)
T ss_dssp             CCEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred             CEEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence            367899999 677999999987432 4799999999999999 57 6999999999999999999999999999999999


Q ss_pred             EEEEEe
Q psy14174        211 TFKLIP  216 (269)
Q Consensus       211 ~l~v~p  216 (269)
                      +|+|..
T Consensus        81 ~l~v~~   86 (87)
T 4e34_A           81 EFEVVY   86 (87)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            998864

>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1

Probab=99.55  E-value=4.2e-14  Score=106.40  Aligned_cols=86  Identities=22%  Similarity=0.389  Sum_probs=77.1

Q ss_pred             CCceEEEEEee-CCCCCCeEEeccCC-------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHH
Q psy14174        132 EETVKIVQLVK-SNEPLGATIKTDEE-------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL  203 (269)
Q Consensus       132 ~~~~r~V~l~k-~~~~lG~ti~~~~~-------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l  203 (269)
                      .+.++.|.|.| +..+|||++.++.+       ..+++|..|.++|||+++|.|++||+|++|||+++.+.++.++..++
T Consensus         3 ge~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l   82 (98)
T 1ihj_A            3 GELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLI   82 (98)
T ss_dssp             CCEEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred             CceEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence            45688999999 88899999988642       23899999999999999996699999999999999999999999999


Q ss_pred             HcCCCeEEEEEEeC
Q psy14174        204 QSSEGTITFKLIPA  217 (269)
Q Consensus       204 ~~~~~~v~l~v~p~  217 (269)
                      +..+..+.|+|.+.
T Consensus        83 ~~~g~~v~l~v~R~   96 (98)
T 1ihj_A           83 KEADFKIELEIQTF   96 (98)
T ss_dssp             HHSCSEEEEEEEEC
T ss_pred             hcCCCeEEEEEEeC
Confidence            99899999999874

>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}

Probab=99.55  E-value=5.2e-14  Score=106.87  Aligned_cols=87  Identities=25%  Similarity=0.467  Sum_probs=74.8

Q ss_pred             CCCceEEEEEee-CCCCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc-
Q psy14174        131 EEETVKIVQLVK-SNEPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS-  205 (269)
Q Consensus       131 ~~~~~r~V~l~k-~~~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~-  205 (269)
                      ..+.+|.|.+.| .+++|||++.....   ..+++|.+|.+||||+++|.|++||+|++|||+++.+.+++++..+|+. 
T Consensus         6 ~~~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~   85 (101)
T 2yt7_A            6 SGDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET   85 (101)
T ss_dssp             TTCCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT
T ss_pred             CCCceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence            456789999998 66899999985421   1269999999999999966579999999999999999999999999988 


Q ss_pred             -CCCeEEEEEEeC
Q psy14174        206 -SEGTITFKLIPA  217 (269)
Q Consensus       206 -~~~~v~l~v~p~  217 (269)
                       .+..++|+|.++
T Consensus        86 ~~g~~v~l~v~R~   98 (101)
T 2yt7_A           86 KSQTSVTLSIVHC   98 (101)
T ss_dssp             TTSSEEEEEECCC
T ss_pred             CCCCeEEEEEEeC
Confidence             678999999875

>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.55  E-value=3.8e-14  Score=108.60  Aligned_cols=88  Identities=32%  Similarity=0.459  Sum_probs=77.1

Q ss_pred             CCCceEEEEEeeCCCCCCeEEec---cC----CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHH
Q psy14174        131 EEETVKIVQLVKSNEPLGATIKT---DE----ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL  203 (269)
Q Consensus       131 ~~~~~r~V~l~k~~~~lG~ti~~---~~----~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l  203 (269)
                      +...++.|.|.|...+|||++.+   +.    ...+++|..|.++|||+++|.|++||+|++|||.++.++++.+++.++
T Consensus         6 ~~~~~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~   85 (107)
T 1wf8_A            6 SGLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVL   85 (107)
T ss_dssp             CCEEEEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHH
T ss_pred             CCceEEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence            34456778899988899999998   22    234899999999999999997799999999999999999999999999


Q ss_pred             HcCCCeEEEEEEeCC
Q psy14174        204 QSSEGTITFKLIPAD  218 (269)
Q Consensus       204 ~~~~~~v~l~v~p~~  218 (269)
                      +..+..+.|+|.+..
T Consensus        86 ~~~~~~v~l~v~R~~  100 (107)
T 1wf8_A           86 RNTKGNVRFVIGREK  100 (107)
T ss_dssp             HHCCSEEEEEEEEEC
T ss_pred             hcCCCeEEEEEEeCC
Confidence            999999999998754

>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A

Probab=99.55  E-value=3.3e-14  Score=118.31  Aligned_cols=84  Identities=33%  Similarity=0.440  Sum_probs=75.2

Q ss_pred             CceEEEEEeeCCCCCCeEEec---cC----CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        133 ETVKIVQLVKSNEPLGATIKT---DE----ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~---~~----~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      ..+..|.|.|+..+|||+|.+   +.    ...+++|.+|.+||||+++|+|++||+|++|||+++.++++.+++.+|++
T Consensus        79 ~~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~  158 (170)
T 3egg_C           79 LELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN  158 (170)
T ss_dssp             SEEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH
T ss_pred             ceEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence            445678899977899999998   22    23589999999999999999889999999999999999999999999999


Q ss_pred             CCCeEEEEEEe
Q psy14174        206 SEGTITFKLIP  216 (269)
Q Consensus       206 ~~~~v~l~v~p  216 (269)
                      +++.|+|+|.+
T Consensus       159 ~g~~v~L~V~R  169 (170)
T 3egg_C          159 TKGRVRFMIGR  169 (170)
T ss_dssp             CCSEEEEEEEE
T ss_pred             CCCEEEEEEEe
Confidence            99999999986

>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.55  E-value=4.7e-14  Score=110.04  Aligned_cols=87  Identities=24%  Similarity=0.442  Sum_probs=77.2

Q ss_pred             CCceEEEEEee-CCCCCCeEEeccCC--CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        132 EETVKIVQLVK-SNEPLGATIKTDEE--SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       132 ~~~~r~V~l~k-~~~~lG~ti~~~~~--~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ...++.|.|.| .+.+|||++.++..  .++++|.+|.+||+|+++|+|++||+|++|||+++.+++++++..+++..+.
T Consensus        13 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~   92 (117)
T 1v62_A           13 ASGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISE   92 (117)
T ss_dssp             SSSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSS
T ss_pred             CCCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence            34578899999 56899999998743  2359999999999999999779999999999999999999999999998899


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .+.|+|.+..
T Consensus        93 ~v~l~v~r~~  102 (117)
T 1v62_A           93 KVRLEILPVP  102 (117)
T ss_dssp             EEEEEECCBT
T ss_pred             eEEEEEEECC
Confidence            9999998864

>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A

Probab=99.55  E-value=6.5e-14  Score=105.18  Aligned_cols=84  Identities=29%  Similarity=0.497  Sum_probs=73.0

Q ss_pred             CceEEEEEee-CCCCCCeEEec-------cCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHH
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKT-------DEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL  203 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~-------~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l  203 (269)
                      ...|+|.|.| .+++|||++.+       +.. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..++
T Consensus         3 ~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l   81 (96)
T 2ego_A            3 QQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII   81 (96)
T ss_dssp             CCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred             CccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence            3568899999 55799999997       211 2389999999999999999 699999999999999999999999999


Q ss_pred             HcCCCeEEEEEEeC
Q psy14174        204 QSSEGTITFKLIPA  217 (269)
Q Consensus       204 ~~~~~~v~l~v~p~  217 (269)
                      +..++.+.|+|.+.
T Consensus        82 ~~~~~~v~l~v~~~   95 (96)
T 2ego_A           82 KASGNVLRLETLYG   95 (96)
T ss_dssp             HHTTTEEEEEEECC
T ss_pred             HhCCCeEEEEEEEC
Confidence            99888999999874

>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=4e-14  Score=111.98  Aligned_cols=86  Identities=16%  Similarity=0.315  Sum_probs=76.7

Q ss_pred             CceEEEEEeeC-CCCCCeEEeccCCC----CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecC-CCChHHHHHHHHcC
Q psy14174        133 ETVKIVQLVKS-NEPLGATIKTDEES----GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVE-GKTPGDVLKILQSS  206 (269)
Q Consensus       133 ~~~r~V~l~k~-~~~lG~ti~~~~~~----~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~-~~~~~~~~~~l~~~  206 (269)
                      ..++.|.+.|. ..+|||+|.++...    .+++|..|.+||||+++|.|++||+|++|||+++. ++++.+++.+++..
T Consensus        24 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~  103 (128)
T 2db5_A           24 RQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQT  103 (128)
T ss_dssp             CEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHC
T ss_pred             CceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence            56788999994 57999999886432    28999999999999999977999999999999997 99999999999999


Q ss_pred             CCeEEEEEEeCC
Q psy14174        207 EGTITFKLIPAD  218 (269)
Q Consensus       207 ~~~v~l~v~p~~  218 (269)
                      +..+.|+|.+..
T Consensus       104 ~~~v~l~v~r~~  115 (128)
T 2db5_A          104 TGSLRLIVAREP  115 (128)
T ss_dssp             CSEEEEEEEECC
T ss_pred             CCeEEEEEEcCC
Confidence            999999998854

>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.54  E-value=4.1e-14  Score=108.06  Aligned_cols=86  Identities=24%  Similarity=0.444  Sum_probs=74.6

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCC-c-EEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc-----
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESG-K-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS-----  205 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~-~-i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~-----  205 (269)
                      ...+.|.+.|.+.+|||+|.++.+.. + ++|.+|.++|||+++|.|++||+|++|||+++.+++|++++.+|+.     
T Consensus         5 ~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~   84 (103)
T 1ufx_A            5 SSGTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTK   84 (103)
T ss_dssp             SSSEEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCS
T ss_pred             CceEEEEEEcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccC
Confidence            34678889888899999999886432 4 4999999999999999789999999999999999999999999987     


Q ss_pred             CCCeEEEEEEeCC
Q psy14174        206 SEGTITFKLIPAD  218 (269)
Q Consensus       206 ~~~~v~l~v~p~~  218 (269)
                      .+..+.|.+.+..
T Consensus        85 ~~~~i~l~v~r~~   97 (103)
T 1ufx_A           85 DRDYIDFLVTEFN   97 (103)
T ss_dssp             SCSEEEEEECCCC
T ss_pred             CCCeEEEEEEEcc
Confidence            4677888887754

>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A

Probab=99.54  E-value=8.1e-14  Score=106.48  Aligned_cols=86  Identities=24%  Similarity=0.425  Sum_probs=75.0

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccC----CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDE----ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~----~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      +.....|.+ |++.+|||++.++.    ...+++|..|.+||||+++|.|++||+|++|||.++.++++.++..+++..+
T Consensus         9 ~~~~~~v~l-~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g   87 (106)
T 3axa_A            9 EPEIITVTL-KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS   87 (106)
T ss_dssp             -CCEEEEEE-ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred             CceEEEEEE-CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence            344566777 88889999998752    2348999999999999999977999999999999999999999999999999


Q ss_pred             CeEEEEEEeCC
Q psy14174        208 GTITFKLIPAD  218 (269)
Q Consensus       208 ~~v~l~v~p~~  218 (269)
                      ..+.|+|.+..
T Consensus        88 ~~v~l~v~R~~   98 (106)
T 3axa_A           88 SVVTLEVAKQG   98 (106)
T ss_dssp             SEEEEEEECCC
T ss_pred             CeEEEEEEeCC
Confidence            99999999864

>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}

Probab=99.54  E-value=1.2e-13  Score=103.92  Aligned_cols=85  Identities=25%  Similarity=0.489  Sum_probs=76.6

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCC--CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEES--GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~--~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ..+.|.+.|+..+|||++.++.+.  .+++|..|.++|||+++|.|++||+|++|||.++.++++.++..+++..+..+.
T Consensus         4 ~~~~v~l~~~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~   83 (98)
T 2opg_A            4 CETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVR   83 (98)
T ss_dssp             EEEEEEEECBTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred             CEEEEEEEECCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence            457789999888999999987533  489999999999999999669999999999999999999999999998889999


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      |+|.+..
T Consensus        84 l~v~R~~   90 (98)
T 2opg_A           84 LTLYRDE   90 (98)
T ss_dssp             EEEEECS
T ss_pred             EEEEcCC
Confidence            9998854

>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=4.8e-14  Score=104.98  Aligned_cols=84  Identities=32%  Similarity=0.602  Sum_probs=75.0

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      .+|.|.|.|...+|||++.++.. ..+++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++..++.+.|
T Consensus         5 ~~r~v~l~k~~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l   84 (93)
T 2dkr_A            5 SSGVVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKL   84 (93)
T ss_dssp             CSCEEEEECCTTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEEEeCCCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEE
Confidence            46889999988999999998643 35899999999999999964699999999999999999999999999988888999


Q ss_pred             EEEeC
Q psy14174        213 KLIPA  217 (269)
Q Consensus       213 ~v~p~  217 (269)
                      +|.+.
T Consensus        85 ~v~r~   89 (93)
T 2dkr_A           85 VVRSG   89 (93)
T ss_dssp             EECCC
T ss_pred             EEEeC
Confidence            98764

>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=2.5e-14  Score=109.28  Aligned_cols=86  Identities=26%  Similarity=0.409  Sum_probs=77.6

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ....|+|.|.|++.+|||++.+.....+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+.
T Consensus         6 ~~~~r~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~   84 (106)
T 2eei_A            6 SGQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVM   84 (106)
T ss_dssp             CSSSEEEEEECCSSSCSCCEECCSSCCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEE
T ss_pred             CCCCEEEEEEECCCCCCEEEEeccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence            34568999999989999999887655699999999999999999 79999999999999999999999999988889999


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      +++.+..
T Consensus        85 l~v~r~~   91 (106)
T 2eei_A           85 FLLVDKE   91 (106)
T ss_dssp             EEECCTT
T ss_pred             EEEEcCc
Confidence            9998754

>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}

Probab=99.53  E-value=6.8e-14  Score=105.05  Aligned_cols=84  Identities=29%  Similarity=0.423  Sum_probs=74.9

Q ss_pred             eEEEEEeeCCCCCCeEEeccCC-----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEE-----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~-----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      ...|.+.|++.+|||++.++.+     ..+++|..|.+||||+++|.|++||+|++|||.++.++++.++..+++..+..
T Consensus         4 ~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~   83 (97)
T 2jil_A            4 TVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQE   83 (97)
T ss_dssp             EEEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSE
T ss_pred             EEEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence            4567888888899999998743     34899999999999999996699999999999999999999999999998899


Q ss_pred             EEEEEEeCC
Q psy14174        210 ITFKLIPAD  218 (269)
Q Consensus       210 v~l~v~p~~  218 (269)
                      +.|+|.+..
T Consensus        84 v~l~v~R~~   92 (97)
T 2jil_A           84 AALLIEYDV   92 (97)
T ss_dssp             EEEEEEEEC
T ss_pred             EEEEEEeCC
Confidence            999998754

>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}

Probab=99.53  E-value=4.3e-14  Score=104.72  Aligned_cols=83  Identities=25%  Similarity=0.404  Sum_probs=73.4

Q ss_pred             eEEEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC--CeEE
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE--GTIT  211 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~--~~v~  211 (269)
                      .+.|.|.|+..+|||++.++.. ..+++|..|.++|||+++|.|++||+|++|||.++.+.++.++..+++..+  +.+.
T Consensus         3 ~~~v~l~~~~~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~   82 (90)
T 2q9v_A            3 EQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVN   82 (90)
T ss_dssp             EEEEEEECBTTBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEE
T ss_pred             cEEEEEEECCCccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEE
Confidence            4778999988899999998743 347999999999999999966999999999999999999999999998874  4899


Q ss_pred             EEEEeC
Q psy14174        212 FKLIPA  217 (269)
Q Consensus       212 l~v~p~  217 (269)
                      |+|.+.
T Consensus        83 l~v~R~   88 (90)
T 2q9v_A           83 LTVRQT   88 (90)
T ss_dssp             EEEEEC
T ss_pred             EEEEec
Confidence            999874

>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.53  E-value=3.1e-14  Score=108.40  Aligned_cols=87  Identities=29%  Similarity=0.434  Sum_probs=76.9

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CC
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EG  208 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~  208 (269)
                      +-..+.|.|.|...+|||++.++.. ..+++|.+|.++|||+++|.|++||+|++|||+++.++++.++..+++..  +.
T Consensus         7 ~~~~~~v~l~~~~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~   86 (103)
T 1uep_A            7 GYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNG   86 (103)
T ss_dssp             SEEEECCEEESSSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHT
T ss_pred             CceEEEEEEEeCCCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence            3456778899988899999998643 35899999999999999997799999999999999999999999999887  79


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .++|+|.+..
T Consensus        87 ~v~l~v~R~~   96 (103)
T 1uep_A           87 QVNLTVRRKV   96 (103)
T ss_dssp             EEEEEEEEEC
T ss_pred             cEEEEEEeCC
Confidence            9999998854

>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A

Probab=99.53  E-value=4.5e-14  Score=108.03  Aligned_cols=86  Identities=21%  Similarity=0.370  Sum_probs=74.8

Q ss_pred             CCCceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCC-CCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        131 EEETVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGL-IHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       131 ~~~~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~Gl-L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      +.+.++.|.+.| ...+|||++.++.+. .+++|..|.+||||+++|. |++||+|++|||.++.++++.+++.+++..+
T Consensus        14 ~~~~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~   93 (107)
T 3nfk_A           14 PHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC   93 (107)
T ss_dssp             --CCCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGG
T ss_pred             CCCCEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence            456789999999 558999999987433 4899999999999999993 7999999999999999999999999999876


Q ss_pred             C----eEEEEEEe
Q psy14174        208 G----TITFKLIP  216 (269)
Q Consensus       208 ~----~v~l~v~p  216 (269)
                      .    .+.|+|.+
T Consensus        94 ~~~~~~v~l~v~r  106 (107)
T 3nfk_A           94 ERHSGELMLLVRP  106 (107)
T ss_dssp             GSBTTBEEEEEEC
T ss_pred             ccCCcEEEEEEEc
Confidence            5    89999876

>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.53  E-value=6.9e-14  Score=107.22  Aligned_cols=86  Identities=30%  Similarity=0.484  Sum_probs=77.2

Q ss_pred             CceEEEEEeeCCCCCCeEEe-----ccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHH
Q psy14174        133 ETVKIVQLVKSNEPLGATIK-----TDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL  203 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~-----~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l  203 (269)
                      ...+.|.|.|.+.+|||++.     ++..    ..+++|.+|.++|||+++|.|++||+|++|||.++.++++.+++.++
T Consensus         8 ~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~   87 (108)
T 1q7x_A            8 GDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETL   87 (108)
T ss_dssp             SSEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHH
T ss_pred             CcEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence            45788999998899999999     6532    35899999999999999997799999999999999999999999999


Q ss_pred             HcCCCeEEEEEEeCC
Q psy14174        204 QSSEGTITFKLIPAD  218 (269)
Q Consensus       204 ~~~~~~v~l~v~p~~  218 (269)
                      +..+..+.|+|.+..
T Consensus        88 ~~~g~~v~l~v~R~~  102 (108)
T 1q7x_A           88 RNTGQVVHLLLEKGQ  102 (108)
T ss_dssp             HHTTSEEEEEEECCC
T ss_pred             HcCCCeEEEEEEeCC
Confidence            999999999998854

>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1

Probab=99.53  E-value=8.8e-14  Score=103.46  Aligned_cols=81  Identities=22%  Similarity=0.279  Sum_probs=73.9

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      .+|.|.+.|+..+|||++.+.   .+++|..|.+||||+++| |++||+|++|||.++.++++.++..+++..++.+.|+
T Consensus         3 ~~r~v~l~~~~~g~G~~l~~~---~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~   78 (91)
T 2f5y_A            3 RYRQITIPRGKDGFGFTICCD---SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILL   78 (91)
T ss_dssp             EEEEEEEECBTTBTSEEEECS---SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred             ceEEEEEEeCCCCccEEEecC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence            468899999888999999875   479999999999999999 6999999999999999999999999999888899999


Q ss_pred             EEeCC
Q psy14174        214 LIPAD  218 (269)
Q Consensus       214 v~p~~  218 (269)
                      +.+..
T Consensus        79 v~R~~   83 (91)
T 2f5y_A           79 VWRMV   83 (91)
T ss_dssp             EEECC
T ss_pred             EEeCC
Confidence            98854

>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1

Probab=99.53  E-value=1.6e-13  Score=101.73  Aligned_cols=84  Identities=17%  Similarity=0.218  Sum_probs=74.3

Q ss_pred             CceEEEEEeeC-C-CCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        133 ETVKIVQLVKS-N-EPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k~-~-~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ...+.|.+.|. + .+|||++.++....+++|..|.+||||+++| |++||+|++|||+++.++++.++..+++..+..+
T Consensus         5 ~~~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v   83 (91)
T 1m5z_A            5 VELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKL   83 (91)
T ss_dssp             CEEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEE
T ss_pred             cceEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence            45677899993 3 5899999987655799999999999999999 7999999999999999999999999998888999


Q ss_pred             EEEEEeC
Q psy14174        211 TFKLIPA  217 (269)
Q Consensus       211 ~l~v~p~  217 (269)
                      .|+|.+.
T Consensus        84 ~l~v~R~   90 (91)
T 1m5z_A           84 DLVISRN   90 (91)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEeC
Confidence            9998763

>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.53  E-value=5.8e-14  Score=106.57  Aligned_cols=85  Identities=19%  Similarity=0.350  Sum_probs=76.9

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      ...|+|.|.|+..+|||++.++....+++|..|.+||||+++| |++||+|++|||.++.++++.++..+++..+..+.|
T Consensus         5 ~~~r~v~l~k~~~g~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l   83 (102)
T 2d90_A            5 SSGRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTL   83 (102)
T ss_dssp             SSSEEEEEECCSSSSSCEEEECSSSSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEE
T ss_pred             CCCEEEEEeeCCCCccEEEEeecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEE
Confidence            4568899999888999999987555699999999999999999 699999999999999999999999999888999999


Q ss_pred             EEEeCC
Q psy14174        213 KLIPAD  218 (269)
Q Consensus       213 ~v~p~~  218 (269)
                      ++.+..
T Consensus        84 ~v~r~~   89 (102)
T 2d90_A           84 LVLDKE   89 (102)
T ss_dssp             EECSTT
T ss_pred             EEEECC
Confidence            997743

>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}

Probab=99.53  E-value=8.5e-14  Score=109.52  Aligned_cols=87  Identities=21%  Similarity=0.409  Sum_probs=78.4

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCCC--CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEES--GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~~--~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      ...++.|.|.|...+|||++.++...  .+++|..|.+||||+++|.|++||+|++|||.++.++++.+++.+++..++.
T Consensus        23 ~~~~~~v~l~k~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~  102 (124)
T 2daz_A           23 PGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSK  102 (124)
T ss_dssp             SSEEEEEEEECCSSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSE
T ss_pred             CCceEEEEEEeCCCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence            35678899999888999999987543  4899999999999999997799999999999999999999999999999899


Q ss_pred             EEEEEEeCC
Q psy14174        210 ITFKLIPAD  218 (269)
Q Consensus       210 v~l~v~p~~  218 (269)
                      +.|+|.+..
T Consensus       103 v~l~v~R~~  111 (124)
T 2daz_A          103 VKLVFIRNE  111 (124)
T ss_dssp             EEEEEEECT
T ss_pred             EEEEEEeCC
Confidence            999998854

>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}

Probab=99.53  E-value=6.8e-14  Score=108.83  Aligned_cols=86  Identities=17%  Similarity=0.425  Sum_probs=76.8

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCC----------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHH
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEE----------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLK  201 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~----------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~  201 (269)
                      ..+++|.|.| .+.+|||+|.++.+          ..+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.
T Consensus        14 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~   93 (117)
T 2ehr_A           14 GPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVE   93 (117)
T ss_dssp             CCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHH
T ss_pred             CCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence            4578899999 57899999998753          248999999999999999967999999999999999999999999


Q ss_pred             HHHcCCCeEEEEEEeCC
Q psy14174        202 ILQSSEGTITFKLIPAD  218 (269)
Q Consensus       202 ~l~~~~~~v~l~v~p~~  218 (269)
                      +++..+..+.|+|.+..
T Consensus        94 ~~~~~g~~v~l~v~r~~  110 (117)
T 2ehr_A           94 AIKNAGNPVVFIVQSLS  110 (117)
T ss_dssp             HHHTSCSSEEEEECCBS
T ss_pred             HHHcCCCeEEEEEEECC
Confidence            99999999999997743

>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.53  E-value=5.8e-14  Score=109.46  Aligned_cols=85  Identities=24%  Similarity=0.340  Sum_probs=75.1

Q ss_pred             ceEEEEEeeCC-------CCCCeEEeccCCC------CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHH
Q psy14174        134 TVKIVQLVKSN-------EPLGATIKTDEES------GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVL  200 (269)
Q Consensus       134 ~~r~V~l~k~~-------~~lG~ti~~~~~~------~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~  200 (269)
                      .++.|.+.|..       .+|||+|.++...      .+++|.+|.++|||+++|.|++||+|++|||+++.++++.+++
T Consensus        12 ~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~   91 (117)
T 1ujd_A           12 PHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQ   91 (117)
T ss_dssp             CEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHH
T ss_pred             ceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHH
Confidence            45778888844       8999999987532      2799999999999999997799999999999999999999999


Q ss_pred             HHHHcCCCeEEEEEEeCC
Q psy14174        201 KILQSSEGTITFKLIPAD  218 (269)
Q Consensus       201 ~~l~~~~~~v~l~v~p~~  218 (269)
                      .+++..+..++|+|.+..
T Consensus        92 ~~l~~~~~~v~l~v~R~~  109 (117)
T 1ujd_A           92 SIISQQSGEAEICVRLDL  109 (117)
T ss_dssp             HHHSCCSSCEEEEEESSC
T ss_pred             HHHhcCCCEEEEEEEECC
Confidence            999999999999998754

>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.52  E-value=3.1e-13  Score=106.20  Aligned_cols=87  Identities=30%  Similarity=0.377  Sum_probs=76.7

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCC
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEG  208 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~  208 (269)
                      ....+.|.+.|...+|||++.++.. ..+++|..|.++|+|+++|.|++||+|++|||+++.++++.++..+|+.  .+.
T Consensus        17 ~~~~~~v~l~~~~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~   96 (123)
T 1ueq_A           17 KGTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQ   96 (123)
T ss_dssp             CSEEEEEEEECCTTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred             CCcEEEEEEEeCCCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence            4556778999988899999998643 3579999999999999999779999999999999999999999999998  468


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .+.|+|.+..
T Consensus        97 ~v~l~v~R~~  106 (123)
T 1ueq_A           97 SVNLVLCRGY  106 (123)
T ss_dssp             EEEEEEEESC
T ss_pred             eEEEEEEeCC
Confidence            9999998854

>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}

Probab=99.52  E-value=1e-13  Score=103.95  Aligned_cols=84  Identities=18%  Similarity=0.340  Sum_probs=75.2

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ..|.|.|.|+..+|||++.+..+   ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+
T Consensus         3 ~~r~v~l~k~~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v   81 (96)
T 2v90_A            3 KPRCLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCV   81 (96)
T ss_dssp             CCEEEEEECBTTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred             CCEEEEEEeCCCcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence            45889999988899999988531   2389999999999999999 6999999999999999999999999999888999


Q ss_pred             EEEEEeCC
Q psy14174        211 TFKLIPAD  218 (269)
Q Consensus       211 ~l~v~p~~  218 (269)
                      .|++.+.+
T Consensus        82 ~l~v~r~~   89 (96)
T 2v90_A           82 SLTVVDPE   89 (96)
T ss_dssp             EEEEECCC
T ss_pred             EEEEECCC
Confidence            99999864

>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.52  E-value=9.5e-14  Score=108.56  Aligned_cols=87  Identities=21%  Similarity=0.335  Sum_probs=77.7

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      ...++.|.|.|...+|||+|.++.+      ..+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++.
T Consensus        15 ~~~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~   94 (120)
T 2eno_A           15 LVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN   94 (120)
T ss_dssp             EEEEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH
T ss_pred             CCceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence            3467889999977999999998643      3589999999999999999779999999999999999999999999998


Q ss_pred             CCCeEEEEEEeCC
Q psy14174        206 SEGTITFKLIPAD  218 (269)
Q Consensus       206 ~~~~v~l~v~p~~  218 (269)
                      .+..+.|+|.+..
T Consensus        95 ~g~~v~l~v~R~~  107 (120)
T 2eno_A           95 AGYAVSLRVQHRL  107 (120)
T ss_dssp             HCSEEEEEEEEEE
T ss_pred             CCCeEEEEEEeCC
Confidence            8889999998753

>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0

Probab=99.52  E-value=7.5e-14  Score=106.59  Aligned_cols=83  Identities=19%  Similarity=0.432  Sum_probs=75.9

Q ss_pred             eEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      +|.|.+.| .+.+|||.+..+....+++|..|.+||||+++| |++||+|++|||.++.++++.++..+++..+..++|+
T Consensus         2 ~r~v~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~   80 (106)
T 3ngh_A            2 PRESKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLL   80 (106)
T ss_dssp             CEEEEEECCTTCCCCCEEECCTTCCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEE
T ss_pred             CEEEEEEeCCCCeeCEEEEEEeCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEE
Confidence            47899999 668999999988666689999999999999999 6999999999999999999999999999899999999


Q ss_pred             EEeCC
Q psy14174        214 LIPAD  218 (269)
Q Consensus       214 v~p~~  218 (269)
                      +.+..
T Consensus        81 v~r~~   85 (106)
T 3ngh_A           81 VLDGD   85 (106)
T ss_dssp             EECHH
T ss_pred             EEECC
Confidence            98753

>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.52  E-value=2.1e-13  Score=104.85  Aligned_cols=87  Identities=20%  Similarity=0.320  Sum_probs=77.5

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      ....+.|.|.|...+|||++.++..    ..+++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++..+
T Consensus         6 ~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~   85 (110)
T 1um1_A            6 SGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG   85 (110)
T ss_dssp             CCCEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCC
T ss_pred             CCcEEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence            3457778999988899999998642    348999999999999999967999999999999999999999999999999


Q ss_pred             CeEEEEEEeCC
Q psy14174        208 GTITFKLIPAD  218 (269)
Q Consensus       208 ~~v~l~v~p~~  218 (269)
                      ..+.|+|.+..
T Consensus        86 ~~v~l~v~R~~   96 (110)
T 1um1_A           86 KKMRFLVAKSD   96 (110)
T ss_dssp             SEEEEEEECCC
T ss_pred             CeEEEEEEeCC
Confidence            99999999864

>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A

Probab=99.51  E-value=1.5e-13  Score=108.26  Aligned_cols=84  Identities=26%  Similarity=0.401  Sum_probs=75.4

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ..+.|.+.| ...+|||++.++.. ..+++|.+|.+||||+++|.|++||+|++|||.++.++++.++..++++.++.++
T Consensus        19 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~   98 (125)
T 3hpk_A           19 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT   98 (125)
T ss_dssp             EEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred             CCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence            357788999 67799999998853 3489999999999999999779999999999999999999999999999999999


Q ss_pred             EEEEeC
Q psy14174        212 FKLIPA  217 (269)
Q Consensus       212 l~v~p~  217 (269)
                      ++|.+.
T Consensus        99 l~v~r~  104 (125)
T 3hpk_A           99 IHYNKL  104 (125)
T ss_dssp             EEEEEE
T ss_pred             EEEEEC
Confidence            999873

>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}

Probab=99.51  E-value=8.8e-14  Score=103.06  Aligned_cols=76  Identities=28%  Similarity=0.465  Sum_probs=68.2

Q ss_pred             EEEee--CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEE
Q psy14174        138 VQLVK--SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLI  215 (269)
Q Consensus       138 V~l~k--~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~  215 (269)
                      +.+.|  ..++|||++.+     +++|.+|.+||+|+++|.|++||+|++|||+++.+++++++..++++++++++|++.
T Consensus         4 v~l~~~~~~~~~G~~~~~-----gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~   78 (88)
T 3e17_A            4 VLLMKSRANEEYGLRLGS-----QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVL   78 (88)
T ss_dssp             EEEECBTTBCCCCEEEEE-----EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEC
T ss_pred             EEEEeCCCCCCCCEEEeC-----CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEe
Confidence            45665  56789999864     799999999999999997799999999999999999999999999999999999998


Q ss_pred             eCC
Q psy14174        216 PAD  218 (269)
Q Consensus       216 p~~  218 (269)
                      +..
T Consensus        79 ~~~   81 (88)
T 3e17_A           79 RDL   81 (88)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            854

>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}

Probab=99.51  E-value=1.7e-13  Score=100.34  Aligned_cols=80  Identities=28%  Similarity=0.391  Sum_probs=69.9

Q ss_pred             EEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCeEEEE
Q psy14174        137 IVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGTITFK  213 (269)
Q Consensus       137 ~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~v~l~  213 (269)
                      .|.+.|+..+|||++.++.. ..+++|..|.+||||+++|.|++||+|++|||.++.++++.++..+++..  +..+.|+
T Consensus         3 ~v~l~k~~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~   82 (85)
T 2i04_A            3 HTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLE   82 (85)
T ss_dssp             EEEEECBTTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEE
T ss_pred             EEEEEECCCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEE
Confidence            46788988899999998632 34799999999999999996699999999999999999999999999886  6788888


Q ss_pred             EEe
Q psy14174        214 LIP  216 (269)
Q Consensus       214 v~p  216 (269)
                      +.+
T Consensus        83 v~R   85 (85)
T 2i04_A           83 LCR   85 (85)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            753

>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.3e-13  Score=104.91  Aligned_cols=87  Identities=21%  Similarity=0.336  Sum_probs=76.5

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ....+.|.+.|...+|||++.++.+   ..+++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++..+.
T Consensus         9 ~~~~~~v~l~~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~   88 (104)
T 2djt_A            9 ASGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGP   88 (104)
T ss_dssp             CCCCEEEEEECCSSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCS
T ss_pred             CCceEEEEEEeCCCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence            3456778999977899999998642   3589999999999999999669999999999999999999999999988889


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .+.|+|.+..
T Consensus        89 ~v~l~v~R~g   98 (104)
T 2djt_A           89 QLHLVIRRPL   98 (104)
T ss_dssp             EEEEEECCCC
T ss_pred             eEEEEEEECC
Confidence            9999998754

>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A

Probab=99.51  E-value=3.6e-13  Score=106.76  Aligned_cols=87  Identities=25%  Similarity=0.345  Sum_probs=76.3

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CC
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EG  208 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~  208 (269)
                      ......|.+.|+..+|||++.++.. ..+++|..|.+||+|+++|.|++||+|++|||+++.++++.+++.+++..  +.
T Consensus        16 ~g~~~~v~l~~~~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~   95 (129)
T 2kpk_A           16 KGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGA   95 (129)
T ss_dssp             CSEEEEEEEEECSSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTE
T ss_pred             CCcEEEEEEEECCCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence            3556778999988899999998632 34799999999999999997799999999999999999999999999887  67


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .+.|+|.+..
T Consensus        96 ~v~l~v~R~~  105 (129)
T 2kpk_A           96 SVDLELCRGY  105 (129)
T ss_dssp             EEEEEEEECS
T ss_pred             eEEEEEEeCC
Confidence            8999998864

>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}

Probab=99.50  E-value=1.2e-13  Score=106.39  Aligned_cols=85  Identities=27%  Similarity=0.490  Sum_probs=76.9

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      ..++.|.+.|.+.+|||++.++.. .+++|..|.+||+|+++|.|++||+|++|||+++.++++.++..+++..+..+.|
T Consensus        14 ~~~~~v~l~~~~~~lG~~l~~~~~-~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l   92 (111)
T 2dlu_A           14 GHVEEVELINDGSGLGFGIVGGKT-SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRM   92 (111)
T ss_dssp             SEEEEEEEECCSSCCCEEEECCSS-SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEEE
T ss_pred             CceEEEEEEeCCCccCEEEeccCC-CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence            457889999988999999998743 5899999999999999996799999999999999999999999999988899999


Q ss_pred             EEEeCC
Q psy14174        213 KLIPAD  218 (269)
Q Consensus       213 ~v~p~~  218 (269)
                      +|.+..
T Consensus        93 ~v~R~~   98 (111)
T 2dlu_A           93 LVARDP   98 (111)
T ss_dssp             EEEESC
T ss_pred             EEEeCC
Confidence            998854

>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*

Probab=99.50  E-value=2.1e-13  Score=104.72  Aligned_cols=84  Identities=27%  Similarity=0.378  Sum_probs=74.2

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCCCC-------------cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHH
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEESG-------------KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDV  199 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~~~-------------~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~  199 (269)
                      ..+.|.|.| ...+|||++.++....             +++|..|.+||+|+++| |++||+|++|||+++.++++.++
T Consensus         7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~   85 (109)
T 1q3o_A            7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV   85 (109)
T ss_dssp             EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred             CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence            357788986 7789999999875421             79999999999999999 79999999999999999999999


Q ss_pred             HHHHHcCCCeEEEEEEeCC
Q psy14174        200 LKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       200 ~~~l~~~~~~v~l~v~p~~  218 (269)
                      ..+++..+..+.|+|.+..
T Consensus        86 ~~~l~~~~~~v~l~v~~~~  104 (109)
T 1q3o_A           86 VNMIRQGGNTLMVKVVMVT  104 (109)
T ss_dssp             HHHHHHTTTEEEEEEEEEE
T ss_pred             HHHHHhCCCEEEEEEEECC
Confidence            9999988889999998743

>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}

Probab=99.50  E-value=8.1e-14  Score=108.33  Aligned_cols=86  Identities=22%  Similarity=0.370  Sum_probs=76.9

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecC-CCChHHHHHHHHcC
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVE-GKTPGDVLKILQSS  206 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~-~~~~~~~~~~l~~~  206 (269)
                      ..++.|.|.| .+.+|||++.++..    ..+++|..|.+||||+++|.|++||+|++|||.++. ++++.++..+++..
T Consensus        19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~   98 (117)
T 2o2t_A           19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA   98 (117)
T ss_dssp             SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred             CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence            4578899999 47899999998742    248999999999999999977999999999999998 99999999999999


Q ss_pred             CCeEEEEEEeCC
Q psy14174        207 EGTITFKLIPAD  218 (269)
Q Consensus       207 ~~~v~l~v~p~~  218 (269)
                      +..+.|+|.+..
T Consensus        99 ~~~v~l~v~R~~  110 (117)
T 2o2t_A           99 KDTVQLVIARGS  110 (117)
T ss_dssp             CSEEEEEEESSC
T ss_pred             CCEEEEEEEeCC
Confidence            999999998854

>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A

Probab=99.50  E-value=2.2e-13  Score=106.20  Aligned_cols=87  Identities=22%  Similarity=0.355  Sum_probs=78.0

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ...++.|.|.|...+|||++.++....+++|..|.+||||+++|.|++||+|++|||.++.++++.++..+++..+..+.
T Consensus        12 ~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~   91 (119)
T 1tp5_A           12 PREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT   91 (119)
T ss_dssp             CCSCEEEEEECTTSCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEE
T ss_pred             CCccEEEEEEECCCCccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence            34678899999878899999987544699999999999999999669999999999999999999999999999999999


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      |++.+..
T Consensus        92 l~v~r~~   98 (119)
T 1tp5_A           92 IIAQYKP   98 (119)
T ss_dssp             EEEEECH
T ss_pred             EEEEECC
Confidence            9998753

>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.50  E-value=3.6e-14  Score=109.41  Aligned_cols=85  Identities=28%  Similarity=0.406  Sum_probs=75.0

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCC----------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHH
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEE----------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKI  202 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~----------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~  202 (269)
                      .++.|.|.| .+.+|||+|.++..          ..+++|..|.++|+|+++|.|++||+|++|||+++.++++.+++.+
T Consensus         9 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~   88 (111)
T 1uju_A            9 GLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQL   88 (111)
T ss_dssp             SSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHH
T ss_pred             ccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence            356688999 56899999998742          2479999999999999999779999999999999999999999999


Q ss_pred             HHcCCCeEEEEEEeCC
Q psy14174        203 LQSSEGTITFKLIPAD  218 (269)
Q Consensus       203 l~~~~~~v~l~v~p~~  218 (269)
                      ++..+..+.|+|.+..
T Consensus        89 l~~~g~~v~l~v~r~~  104 (111)
T 1uju_A           89 LRSVGDTLTVLVCDGF  104 (111)
T ss_dssp             HSSCSSEEEECCCCCC
T ss_pred             HHcCCCeEEEEEEECC
Confidence            9998899999988753

>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.49  E-value=2.1e-13  Score=106.58  Aligned_cols=85  Identities=29%  Similarity=0.441  Sum_probs=73.1

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCC--CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC----
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEES--GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS----  206 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~--~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~----  206 (269)
                      +.++.+.+.+.+ +|||+|.++.+.  ++++|.+|.+||||+++|.|++||+|++|||+++.++++++++.+|+..    
T Consensus        17 ~~~~~~~~~~~~-glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~   95 (118)
T 1v6b_A           17 KDVRLLRIKKEG-SLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQG   95 (118)
T ss_dssp             CCEEEEEEESCS-CCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHT
T ss_pred             ceEEEEEECCCC-ccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcC
Confidence            468888887754 899999987432  4699999999999999944799999999999999999999999999865    


Q ss_pred             CCeEEEEEEeCC
Q psy14174        207 EGTITFKLIPAD  218 (269)
Q Consensus       207 ~~~v~l~v~p~~  218 (269)
                      +..++|+|.+..
T Consensus        96 g~~v~l~v~r~~  107 (118)
T 1v6b_A           96 GDWIDLVVAVCP  107 (118)
T ss_dssp             CSEEEEEEECCC
T ss_pred             CCeEEEEEEeCC
Confidence            789999998853

>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A

Probab=99.49  E-value=2.4e-13  Score=102.19  Aligned_cols=83  Identities=17%  Similarity=0.294  Sum_probs=73.4

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      -....+.+.| .+.+|||++...  ..+++|.+|.+||||+++|.|++||+|++|||+++.+.++.++..+++..++.+.
T Consensus         7 ~~~~~v~l~~~~~~glG~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~   84 (96)
T 2qkv_A            7 LEKFNVDLMKKAGKELGLSLSPN--EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVS   84 (96)
T ss_dssp             CCCEEEEEECBTTBCCCEEEEEC--SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred             CceEEEEEEeCCCCCccEEEEeC--CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEE
Confidence            3445678877 788999999874  4589999999999999999669999999999999999999999999999999999


Q ss_pred             EEEEeC
Q psy14174        212 FKLIPA  217 (269)
Q Consensus       212 l~v~p~  217 (269)
                      |+|.+.
T Consensus        85 l~v~R~   90 (96)
T 2qkv_A           85 MEVTRP   90 (96)
T ss_dssp             EEEECC
T ss_pred             EEEEeC
Confidence            999874

>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}

Probab=99.49  E-value=2e-13  Score=104.64  Aligned_cols=78  Identities=23%  Similarity=0.452  Sum_probs=69.0

Q ss_pred             eeCCCCCCeEEeccCCC------CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        141 VKSNEPLGATIKTDEES------GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       141 ~k~~~~lG~ti~~~~~~------~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      .....+|||+|.+|.+.      .+++|.+|.+||||+++|.|++||+|++|||.++.++++.+++.++++.++.++|+|
T Consensus         9 ~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v   88 (106)
T 4amh_A            9 PRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKV   88 (106)
T ss_dssp             ---CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEE
T ss_pred             CCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEE
Confidence            34678999999998532      389999999999999999779999999999999999999999999999999999999


Q ss_pred             EeCC
Q psy14174        215 IPAD  218 (269)
Q Consensus       215 ~p~~  218 (269)
                      .+..
T Consensus        89 ~R~~   92 (106)
T 4amh_A           89 AKPG   92 (106)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            9864

>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A

Probab=99.49  E-value=1.7e-13  Score=108.43  Aligned_cols=83  Identities=25%  Similarity=0.466  Sum_probs=72.4

Q ss_pred             EEEEEe-eCCCCCCeEEeccCC-----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC---
Q psy14174        136 KIVQLV-KSNEPLGATIKTDEE-----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS---  206 (269)
Q Consensus       136 r~V~l~-k~~~~lG~ti~~~~~-----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~---  206 (269)
                      ..|.+. +...+|||+|.++..     ..+++|.+|.+||||+++|+|++||+|++|||+++.++++.+++.+|+.+   
T Consensus        27 ~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~  106 (127)
T 1wg6_A           27 LEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSM  106 (127)
T ss_dssp             EEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHH
T ss_pred             EEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhcc
Confidence            345566 478899999998743     24899999999999999997899999999999999999999999999976   


Q ss_pred             ----CCeEEEEEEeCC
Q psy14174        207 ----EGTITFKLIPAD  218 (269)
Q Consensus       207 ----~~~v~l~v~p~~  218 (269)
                          +..|+|+|.+..
T Consensus       107 ~g~~~~~v~l~v~R~~  122 (127)
T 1wg6_A          107 EGNIRGMIQLVILRRS  122 (127)
T ss_dssp             HHHHTCEEEEEEEECS
T ss_pred             ccCCCCEEEEEEEeCC
Confidence                789999999854

>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}

Probab=99.49  E-value=3.9e-13  Score=99.04  Aligned_cols=81  Identities=21%  Similarity=0.427  Sum_probs=70.9

Q ss_pred             EEEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        136 KIVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       136 r~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      ..|.+ +++.+|||++.++.. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+.|++
T Consensus         5 ~~v~l-~~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v   82 (88)
T 2uzc_A            5 YSVSL-VGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTL   82 (88)
T ss_dssp             EEEEE-ESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEE
T ss_pred             EEEEE-cCCCcccEEEECcCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence            44666 667899999998754 3489999999999999999 79999999999999999999999999998889999999


Q ss_pred             EeCC
Q psy14174        215 IPAD  218 (269)
Q Consensus       215 ~p~~  218 (269)
                      .+..
T Consensus        83 ~R~g   86 (88)
T 2uzc_A           83 QRES   86 (88)
T ss_dssp             ECCC
T ss_pred             EeCC
Confidence            8743

>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}

Probab=99.49  E-value=1.5e-13  Score=106.20  Aligned_cols=85  Identities=33%  Similarity=0.445  Sum_probs=75.5

Q ss_pred             ceEEEEEeeCCCCCCeEEec---cC----CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        134 TVKIVQLVKSNEPLGATIKT---DE----ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~---~~----~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      ....|.+.|...+|||++.+   +.    ...+++|.+|.+||||+++|.|++||+|++|||.++.++++.++..+++..
T Consensus         4 ~~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~   83 (113)
T 2g5m_B            4 ELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT   83 (113)
T ss_dssp             EEEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS
T ss_pred             EEEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence            35668888988999999998   32    235999999999999999997799999999999999999999999999999


Q ss_pred             CCeEEEEEEeCC
Q psy14174        207 EGTITFKLIPAD  218 (269)
Q Consensus       207 ~~~v~l~v~p~~  218 (269)
                      +..+.|+|.+..
T Consensus        84 g~~v~l~v~R~~   95 (113)
T 2g5m_B           84 KGRVRFMIGRER   95 (113)
T ss_dssp             CSSCEEEEEECC
T ss_pred             CCeEEEEEEeCC
Confidence            999999999864

>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}

Probab=99.48  E-value=7.1e-14  Score=102.03  Aligned_cols=80  Identities=28%  Similarity=0.478  Sum_probs=72.7

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      .+|.|.|.|+..+|||++.++   .+++|..|.+||||+++| |++||+|++|||.++.++++.++..+++..+..+.|+
T Consensus         2 ~~r~v~l~~~~~g~G~~~~~~---~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~   77 (83)
T 2kv8_A            2 RVRSVEVARGRAGYGFTLSGQ---APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMV   77 (83)
T ss_dssp             CEEEEEECCCSSCCSCBCCCS---SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEE
T ss_pred             CcEEEEEEeCCCcccEEEEcC---CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence            468899999888999999875   479999999999999999 7999999999999999999999999998888889999


Q ss_pred             EEeC
Q psy14174        214 LIPA  217 (269)
Q Consensus       214 v~p~  217 (269)
                      |.+.
T Consensus        78 v~R~   81 (83)
T 2kv8_A           78 IAEG   81 (83)
T ss_dssp             EECC
T ss_pred             EEcC
Confidence            9874

>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A

Probab=99.48  E-value=5.5e-13  Score=102.58  Aligned_cols=87  Identities=31%  Similarity=0.531  Sum_probs=75.4

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCCC----CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC-
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEES----GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-  206 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~~----~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~-  206 (269)
                      +.....+.+.++..+|||++.++...    .+++|..|.+||||+++|.|++||+|++|||+++.++++.++..+++.. 
T Consensus         9 ~~~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~   88 (111)
T 2koj_A            9 VGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTK   88 (111)
T ss_dssp             SCEEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred             cCcEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence            34456678888888999999987432    5899999999999999996699999999999999999999999999875 


Q ss_pred             -CCeEEEEEEeCC
Q psy14174        207 -EGTITFKLIPAD  218 (269)
Q Consensus       207 -~~~v~l~v~p~~  218 (269)
                       +..+.|+|.+..
T Consensus        89 ~g~~v~l~v~R~~  101 (111)
T 2koj_A           89 MEGTVSLLVFRQE  101 (111)
T ss_dssp             CSSEEEEEEEECC
T ss_pred             CCCeEEEEEEeCC
Confidence             788999998854

>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}

Probab=99.48  E-value=3.2e-13  Score=106.79  Aligned_cols=88  Identities=28%  Similarity=0.444  Sum_probs=77.1

Q ss_pred             CCCceEEEEEee-CCCCCCeEEeccC------CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHH
Q psy14174        131 EEETVKIVQLVK-SNEPLGATIKTDE------ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL  203 (269)
Q Consensus       131 ~~~~~r~V~l~k-~~~~lG~ti~~~~------~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l  203 (269)
                      .+...+.|.+.| ...+|||++.++.      ...+++|..|.+||||+++|.|++||+|++|||+++.++++.++..++
T Consensus        12 ~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l   91 (129)
T 2dmz_A           12 SLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVL   91 (129)
T ss_dssp             CCEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHH
T ss_pred             CCCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence            345567788866 8889999999853      235899999999999999996799999999999999999999999999


Q ss_pred             HcCCCeEEEEEEeCC
Q psy14174        204 QSSEGTITFKLIPAD  218 (269)
Q Consensus       204 ~~~~~~v~l~v~p~~  218 (269)
                      +..+..+.|+|.+..
T Consensus        92 ~~~~~~v~l~v~R~~  106 (129)
T 2dmz_A           92 RNAGQVVHLTLVRRK  106 (129)
T ss_dssp             HHCCSSEEEEEEEES
T ss_pred             HcCCCeEEEEEEeCC
Confidence            998899999998854

>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2

Probab=99.48  E-value=2.7e-13  Score=105.77  Aligned_cols=87  Identities=26%  Similarity=0.391  Sum_probs=74.9

Q ss_pred             CCceEEEEEee-CCCCCCeEEeccCC--CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        132 EETVKIVQLVK-SNEPLGATIKTDEE--SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       132 ~~~~r~V~l~k-~~~~lG~ti~~~~~--~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      .+.++++.+.| .+.+|||++.++.+  ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..++
T Consensus        13 ~~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~   92 (119)
T 1x6d_A           13 LDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQARE   92 (119)
T ss_dssp             CTTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTS
T ss_pred             CCCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence            45688888988 78899999998754  3589999999999999999779999999999999999999999999988766


Q ss_pred             eE-EEEEEeCC
Q psy14174        209 TI-TFKLIPAD  218 (269)
Q Consensus       209 ~v-~l~v~p~~  218 (269)
                      .+ .+++.+..
T Consensus        93 ~~~~l~v~R~~  103 (119)
T 1x6d_A           93 PRQAVIVTRKL  103 (119)
T ss_dssp             SSEEEEEEECC
T ss_pred             CeEEEEEEcCC
Confidence            54 46676643

>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}

Probab=99.47  E-value=4.8e-13  Score=98.87  Aligned_cols=75  Identities=21%  Similarity=0.360  Sum_probs=67.2

Q ss_pred             CCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        143 SNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       143 ~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      ++.+|||++.++.. ..+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+..+.|+|.+..
T Consensus        11 ~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~   86 (89)
T 2q3g_A           11 GPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAI   86 (89)
T ss_dssp             SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEEEEEC
T ss_pred             CCCcccEEEECcCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence            56899999998753 3489999999999999999 699999999999999999999999999988899999998743

>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.47  E-value=4.3e-13  Score=102.19  Aligned_cols=84  Identities=24%  Similarity=0.384  Sum_probs=74.3

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ...|.|.|.| .+.+|||++.++.. ..+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++. +..+
T Consensus        14 ~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v   91 (104)
T 1wi2_A           14 FLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-AREI   91 (104)
T ss_dssp             SCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-SSSE
T ss_pred             CCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-CCEE
Confidence            3458899999 55899999998743 3489999999999999999 69999999999999999999999999988 7889


Q ss_pred             EEEEEeCC
Q psy14174        211 TFKLIPAD  218 (269)
Q Consensus       211 ~l~v~p~~  218 (269)
                      .|+|.+..
T Consensus        92 ~l~v~r~~   99 (104)
T 1wi2_A           92 SMRVRFFS   99 (104)
T ss_dssp             EEEEECCC
T ss_pred             EEEEEECC
Confidence            99998753

>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}

Probab=99.47  E-value=3e-13  Score=103.77  Aligned_cols=81  Identities=17%  Similarity=0.326  Sum_probs=72.9

Q ss_pred             EEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        136 KIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       136 r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      ..|.|.| .+.+|||++.+.  ..|++|.+|.+||||+++|.|++||+|++|||+++.++++.++..+++..++.+.|+|
T Consensus         4 ~~v~L~k~~~~glG~~i~~~--~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v   81 (106)
T 2la8_A            4 FNVDLMKKAGKELGLSLSPN--EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEV   81 (106)
T ss_dssp             EEEEECCBSSSTTCCEEEEC--SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEE
T ss_pred             EEEEEEeCCCCccCEEEEeC--CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEE
Confidence            4578886 788999999874  4689999999999999999779999999999999999999999999999999999999


Q ss_pred             EeCC
Q psy14174        215 IPAD  218 (269)
Q Consensus       215 ~p~~  218 (269)
                      .+..
T Consensus        82 ~R~~   85 (106)
T 2la8_A           82 TRPK   85 (106)
T ss_dssp             EECC
T ss_pred             EeCC
Confidence            8853

>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A

Probab=99.47  E-value=8.2e-13  Score=98.59  Aligned_cols=81  Identities=27%  Similarity=0.454  Sum_probs=73.0

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      ...|+|.+.|+..+|||++.+.   .+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++ .+..+.|
T Consensus         7 ~~~r~v~l~~~~~~~G~~l~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~l   81 (93)
T 2dls_A            7 GVQRCVIIQKDQHGFGFTVSGD---RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVAL   81 (93)
T ss_dssp             CCEEEEEEECSSSSCCEEEECS---SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEEE
T ss_pred             CCCEEEEEEeCCCceeEEEeCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEEE
Confidence            4568899999889999999875   589999999999999999 6999999999999999999999888886 6899999


Q ss_pred             EEEeCC
Q psy14174        213 KLIPAD  218 (269)
Q Consensus       213 ~v~p~~  218 (269)
                      +|.+..
T Consensus        82 ~v~R~~   87 (93)
T 2dls_A           82 TLLGSS   87 (93)
T ss_dssp             EEECCC
T ss_pred             EEEECC
Confidence            999854

>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A

Probab=99.47  E-value=4.4e-13  Score=106.65  Aligned_cols=75  Identities=25%  Similarity=0.338  Sum_probs=66.6

Q ss_pred             CCCCCeEEeccCCC----CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC--CeEEEEEEeC
Q psy14174        144 NEPLGATIKTDEES----GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE--GTITFKLIPA  217 (269)
Q Consensus       144 ~~~lG~ti~~~~~~----~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~--~~v~l~v~p~  217 (269)
                      +++|||++.++...    .+++|..|.+||||+++|.|++||+|++|||+++.++++.+++.+++...  ..+.|+|.+.
T Consensus        47 ~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~  126 (131)
T 1wfg_A           47 GAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS  126 (131)
T ss_dssp             CTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred             CCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence            77899999886422    38999999999999999977999999999999999999999999998864  8899999874


Q ss_pred             C
Q psy14174        218 D  218 (269)
Q Consensus       218 ~  218 (269)
                      .
T Consensus       127 g  127 (131)
T 1wfg_A          127 G  127 (131)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A

Probab=99.47  E-value=6.2e-13  Score=97.83  Aligned_cols=80  Identities=20%  Similarity=0.338  Sum_probs=69.9

Q ss_pred             EEEee-CCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEE
Q psy14174        138 VQLVK-SNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLI  215 (269)
Q Consensus       138 V~l~k-~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~  215 (269)
                      +.+.+ +..+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.....+.|++.
T Consensus         4 ~~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~   82 (87)
T 2pa1_A            4 LTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLD   82 (87)
T ss_dssp             EEEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEE
T ss_pred             EEEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence            34444 77899999998753 2489999999999999999 699999999999999999999999999988889999998


Q ss_pred             eCC
Q psy14174        216 PAD  218 (269)
Q Consensus       216 p~~  218 (269)
                      +..
T Consensus        83 R~~   85 (87)
T 2pa1_A           83 RIT   85 (87)
T ss_dssp             ECC
T ss_pred             ecC
Confidence            854

>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A

Probab=99.47  E-value=6.6e-13  Score=111.09  Aligned_cols=84  Identities=21%  Similarity=0.394  Sum_probs=76.7

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      .++.|.+.|++.+|||++.++.+      ..+++|..|.+||||+++|.|++||+|++|||+++.++++.++..+++..+
T Consensus         5 ~~~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g   84 (196)
T 3gsl_A            5 EYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG   84 (196)
T ss_dssp             EEEEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred             EEEEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence            46789999988999999999853      358999999999999999977999999999999999999999999999999


Q ss_pred             CeEEEEEEeC
Q psy14174        208 GTITFKLIPA  217 (269)
Q Consensus       208 ~~v~l~v~p~  217 (269)
                      ..+.+++.+.
T Consensus        85 ~~v~l~v~r~   94 (196)
T 3gsl_A           85 SIVRLYVMRR   94 (196)
T ss_dssp             SEEEEEEEEE
T ss_pred             CcEEEEEEec
Confidence            9999999874

>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}

Probab=99.47  E-value=4.1e-13  Score=102.79  Aligned_cols=87  Identities=28%  Similarity=0.412  Sum_probs=74.9

Q ss_pred             CCceEEEEEe--eCCCCCCeEEeccC------CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHH
Q psy14174        132 EETVKIVQLV--KSNEPLGATIKTDE------ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL  203 (269)
Q Consensus       132 ~~~~r~V~l~--k~~~~lG~ti~~~~------~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l  203 (269)
                      +.....|.+.  +...+|||++.++.      ...+++|..|.+||||+++|.|++||+|++|||.++.++++.++..++
T Consensus        10 ~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l   89 (108)
T 2jre_A           10 GFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVL   89 (108)
T ss_dssp             SCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHH
T ss_pred             CcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence            3455667884  47889999998863      234899999999999999996699999999999999999999999999


Q ss_pred             HcCCCeEEEEEEeCC
Q psy14174        204 QSSEGTITFKLIPAD  218 (269)
Q Consensus       204 ~~~~~~v~l~v~p~~  218 (269)
                      +..+..+.|+|.+..
T Consensus        90 ~~~g~~v~l~v~R~~  104 (108)
T 2jre_A           90 RNAGNPVRLLLIRRL  104 (108)
T ss_dssp             HHHCSEEEEEEEECC
T ss_pred             HcCCCeEEEEEEeCC
Confidence            888899999998754

>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}

Probab=99.46  E-value=2.8e-13  Score=105.03  Aligned_cols=85  Identities=24%  Similarity=0.468  Sum_probs=75.9

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCC--CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEES--GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~--~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ..+.+.+.|...+|||++.++.+.  .+++|..|.+||||+++|.|++||+|++|||+++.++++.++..+++..+..+.
T Consensus        17 ~~~~v~l~~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~   96 (116)
T 2dm8_A           17 QEMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKVR   96 (116)
T ss_dssp             SCEEEEEECCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEEE
T ss_pred             CEEEEEEEECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence            347788999889999999987533  489999999999999999679999999999999999999999999998889999


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      |+|.+..
T Consensus        97 l~v~R~~  103 (116)
T 2dm8_A           97 LVVYRDE  103 (116)
T ss_dssp             EEEECCS
T ss_pred             EEEEeCC
Confidence            9998754

>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}

Probab=99.46  E-value=5e-13  Score=100.52  Aligned_cols=82  Identities=22%  Similarity=0.378  Sum_probs=71.8

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE-EE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI-TF  212 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v-~l  212 (269)
                      ..|.+.+.|+..+|||++.++....+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++...+.. .+
T Consensus         9 ~~~~~~l~~~~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l   87 (98)
T 2jxo_A            9 RPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLL   87 (98)
T ss_dssp             CCEEEEEECTTTCCCEEEECCCSSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEE
T ss_pred             CcEEEEEEeCCCcccEEEEecCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            347789999888999999988655699999999999999999 6999999999999999999999999999876554 46


Q ss_pred             EEEe
Q psy14174        213 KLIP  216 (269)
Q Consensus       213 ~v~p  216 (269)
                      ++.+
T Consensus        88 ~v~R   91 (98)
T 2jxo_A           88 VVDR   91 (98)
T ss_dssp             ECCH
T ss_pred             EEEC
Confidence            6655

>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.46  E-value=1.7e-13  Score=106.95  Aligned_cols=87  Identities=22%  Similarity=0.409  Sum_probs=75.3

Q ss_pred             CCCceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhc--CCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        131 EEETVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRS--GLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       131 ~~~~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~--GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      ..+..++|.+.| ...+|||++.++... .+++|.+|.+||||+++  | |++||+|++|||+++.++++.+++.+++..
T Consensus        12 ~~~~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~   90 (119)
T 2cs5_A           12 PHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVLFIKAS   90 (119)
T ss_dssp             CSSCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHHHHHHH
T ss_pred             CCCCeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence            345678899999 556799999987432 37999999999999999  6 799999999999999999999999999887


Q ss_pred             C----CeEEEEEEeCC
Q psy14174        207 E----GTITFKLIPAD  218 (269)
Q Consensus       207 ~----~~v~l~v~p~~  218 (269)
                      +    ..+.|+|.+..
T Consensus        91 ~~~~~~~v~l~v~R~~  106 (119)
T 2cs5_A           91 CERHSGELMLLVRPNA  106 (119)
T ss_dssp             HHCCSSCEEEEEECCC
T ss_pred             cccCCCEEEEEEEccc
Confidence            4    48999998854

>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.46  E-value=6.4e-13  Score=102.87  Aligned_cols=85  Identities=25%  Similarity=0.454  Sum_probs=73.8

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCCC--------CcEEEEEecCCChhhh-cCCCCCCCeEEEECCEecCCCChHHHHHH
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEES--------GKIVVARVMHGGAADR-SGLIHVGDEVCEVNGINVEGKTPGDVLKI  202 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~~--------~~i~V~~V~~gg~A~r-~GlL~~GD~Il~VNG~~v~~~~~~~~~~~  202 (269)
                      ...+.|.+.| ...+|||+|.++...        .+++|..|.++|||++ +| |++||+|++|||+++.++++.++..+
T Consensus         9 ~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~   87 (114)
T 1uew_A            9 LQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKL   87 (114)
T ss_dssp             CCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHH
T ss_pred             ccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence            3457788988 678999999875311        1679999999999999 88 69999999999999999999999999


Q ss_pred             HHcCCCeEEEEEEeCC
Q psy14174        203 LQSSEGTITFKLIPAD  218 (269)
Q Consensus       203 l~~~~~~v~l~v~p~~  218 (269)
                      ++..+..+.|+|.+..
T Consensus        88 l~~~g~~v~l~v~r~~  103 (114)
T 1uew_A           88 IKDAGLSVTLRIIPQE  103 (114)
T ss_dssp             HHHTTTEEEEEECCCS
T ss_pred             HHcCCCeEEEEEEeCC
Confidence            9998899999998864

>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}

Probab=99.46  E-value=1.2e-12  Score=111.00  Aligned_cols=87  Identities=17%  Similarity=0.357  Sum_probs=77.0

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCCC---CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCC--CChHHHHHHHHcC
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEES---GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG--KTPGDVLKILQSS  206 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~~---~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~--~~~~~~~~~l~~~  206 (269)
                      ......|.+.|++.+|||+|.++.+.   .+++|..|.+||+|+++|.|+.||+|++|||+++.+  .++.++..+++..
T Consensus        16 ~~~~~~v~~~~~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~   95 (206)
T 3r0h_A           16 PNKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTT   95 (206)
T ss_dssp             TTSCEEEEEECTTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSC
T ss_pred             CCCEEEEEEEeCCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhc
Confidence            34556788999899999999987543   379999999999999999679999999999999999  9999999999998


Q ss_pred             CCe-EEEEEEeCC
Q psy14174        207 EGT-ITFKLIPAD  218 (269)
Q Consensus       207 ~~~-v~l~v~p~~  218 (269)
                      ++. +.|+|.+..
T Consensus        96 ~~~~v~l~v~R~~  108 (206)
T 3r0h_A           96 YEKAVTLTVFRAD  108 (206)
T ss_dssp             CSSEEEEEEECCS
T ss_pred             CCCceEEEEEecc
Confidence            888 999998754

>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.45  E-value=3.7e-13  Score=104.72  Aligned_cols=84  Identities=23%  Similarity=0.268  Sum_probs=73.9

Q ss_pred             CCceEEEEEeeC-CCCCCeEEeccCC-------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHH
Q psy14174        132 EETVKIVQLVKS-NEPLGATIKTDEE-------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL  203 (269)
Q Consensus       132 ~~~~r~V~l~k~-~~~lG~ti~~~~~-------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l  203 (269)
                      .-..+.|.|.|. +.+|||+|.++.+       ..+++|..|.++|+|+ +| |++||+|++|||+++.++++.+++.++
T Consensus        12 ~~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l   89 (117)
T 2csj_A           12 IWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQL   89 (117)
T ss_dssp             EEEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHH
T ss_pred             cceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence            345678899994 5899999998753       3479999999999997 77 799999999999999999999999999


Q ss_pred             HcCCCeEEEEEEeC
Q psy14174        204 QSSEGTITFKLIPA  217 (269)
Q Consensus       204 ~~~~~~v~l~v~p~  217 (269)
                      +..+..+.|+|.+.
T Consensus        90 ~~~~~~v~l~v~R~  103 (117)
T 2csj_A           90 RKSGKIAAIVVKRP  103 (117)
T ss_dssp             HHSCSEEEEEEEEE
T ss_pred             hcCCCeEEEEEEEC
Confidence            99999999999874

>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}

Probab=99.45  E-value=8.3e-13  Score=97.35  Aligned_cols=81  Identities=25%  Similarity=0.334  Sum_probs=69.4

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~  211 (269)
                      .++.|.|.|+..+|||++.+..+..+++|..+ ++|||+ +| |++||+|++|||.++.++++.++..+++.  .+..+.
T Consensus         3 ~~~~v~l~k~~~g~G~~~~~~~~~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~   79 (88)
T 3bpu_A            3 ELITVHIVKGPMGFGFTIADSPGGGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVT   79 (88)
T ss_dssp             EEEEEEEECBTTBSSCEEEECTTSSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEE
T ss_pred             cEEEEEEEcCCCceeEEEEecCCCCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEE
Confidence            46788999988999999998755568999987 999999 88 69999999999999999999999999985  578899


Q ss_pred             EEEEeC
Q psy14174        212 FKLIPA  217 (269)
Q Consensus       212 l~v~p~  217 (269)
                      |+|.+.
T Consensus        80 l~v~R~   85 (88)
T 3bpu_A           80 LLVQRQ   85 (88)
T ss_dssp             EEEEEE
T ss_pred             EEEEeC
Confidence            999874

>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A

Probab=99.44  E-value=5.4e-13  Score=100.53  Aligned_cols=80  Identities=24%  Similarity=0.364  Sum_probs=70.2

Q ss_pred             EEEeeCCCCCCeEEeccCC---C-----CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        138 VQLVKSNEPLGATIKTDEE---S-----GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       138 V~l~k~~~~lG~ti~~~~~---~-----~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      |.+.|++.+|||++.++..   .     .+++|..|.+||||+++| |++||+|++|||.++.++++.++..+++..+..
T Consensus         6 v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~   84 (99)
T 3khf_A            6 IVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGNK   84 (99)
T ss_dssp             EEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred             EEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCE
Confidence            6778889999999987531   1     167899999999999999 799999999999999999999999999999999


Q ss_pred             EEEEEEeCC
Q psy14174        210 ITFKLIPAD  218 (269)
Q Consensus       210 v~l~v~p~~  218 (269)
                      +.|++.+.+
T Consensus        85 v~l~v~r~~   93 (99)
T 3khf_A           85 ISLRTTALE   93 (99)
T ss_dssp             EEEEEECSC
T ss_pred             EEEEEEECC
Confidence            999999854

>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.44  E-value=2.4e-13  Score=103.07  Aligned_cols=86  Identities=23%  Similarity=0.354  Sum_probs=75.0

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      .....+.+.|...+|||++.++.+. .+++|..|.+||||+++|.|++||+|++|||+++.++++.++..+++..+..+.
T Consensus        10 ~~~~~v~l~~~~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~   89 (103)
T 1wfv_A           10 FDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVR   89 (103)
T ss_dssp             SCCEECCEECCTTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEEC
T ss_pred             ceEEEEEEecCCCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence            3445678888778899999987533 389999999999999999669999999999999999999999999998889999


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      |+|.+..
T Consensus        90 l~v~R~~   96 (103)
T 1wfv_A           90 LLLKRGT   96 (103)
T ss_dssp             EEEECTT
T ss_pred             EEEEECC
Confidence            9998854

>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}

Probab=99.44  E-value=1.1e-12  Score=101.99  Aligned_cols=81  Identities=17%  Similarity=0.257  Sum_probs=70.5

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCeE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~v  210 (269)
                      ...+.|.|.|+..+|||+|.++  ..+.+|.+|.+  ++..+| |++||+|++|||.++.+++|++++.+|+++  +..+
T Consensus        11 ~~~~~V~L~Kg~~G~GFsI~~~--~~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v   85 (113)
T 3soe_A           11 GLLVTIPLIKGPKGFGFAIADS--PTGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADV   85 (113)
T ss_dssp             CEEEEEEEECBTTBSSEEEEEE--TTEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEE
T ss_pred             CCEEEEEEEECCCcccEEEeCC--CCCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEE
Confidence            4568899999888999999765  34778999998  466777 699999999999999999999999999975  6789


Q ss_pred             EEEEEeCC
Q psy14174        211 TFKLIPAD  218 (269)
Q Consensus       211 ~l~v~p~~  218 (269)
                      +|+|.+..
T Consensus        86 ~L~V~R~g   93 (113)
T 3soe_A           86 PLLILRGG   93 (113)
T ss_dssp             EEEEEESS
T ss_pred             EEEEEECC
Confidence            99999965

>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A

Probab=99.44  E-value=6.3e-13  Score=97.19  Aligned_cols=79  Identities=20%  Similarity=0.365  Sum_probs=68.8

Q ss_pred             EEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEE
Q psy14174        137 IVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLI  215 (269)
Q Consensus       137 ~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~  215 (269)
                      .|.+ +++.+|||++.++.. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..++.+.|++.
T Consensus         4 ~v~l-~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~   81 (85)
T 1rgw_A            4 SVTL-TGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQ   81 (85)
T ss_dssp             EEEE-CCSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEEE
T ss_pred             EEEE-eCCCccCEEEEeccCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEEE
Confidence            4566 455799999998743 2489999999999999999 699999999999999999999999999888888999997


Q ss_pred             eC
Q psy14174        216 PA  217 (269)
Q Consensus       216 p~  217 (269)
                      +.
T Consensus        82 R~   83 (85)
T 1rgw_A           82 KS   83 (85)
T ss_dssp             SC
T ss_pred             eC
Confidence            64

>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.44  E-value=3.1e-13  Score=104.13  Aligned_cols=86  Identities=27%  Similarity=0.374  Sum_probs=77.9

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ...++.|.|.|...+|||++.++....+++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++..+..+.
T Consensus        13 ~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v~   92 (113)
T 1um7_A           13 AREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVT   92 (113)
T ss_dssp             CCSEEEEEEECCSSCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEEE
T ss_pred             CCceEEEEEEECCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence            35678899999888999999988655699999999999999999669999999999999999999999999998899999


Q ss_pred             EEEEeC
Q psy14174        212 FKLIPA  217 (269)
Q Consensus       212 l~v~p~  217 (269)
                      |+|.+.
T Consensus        93 l~v~r~   98 (113)
T 1um7_A           93 IVAQYR   98 (113)
T ss_dssp             EEEECC
T ss_pred             EEEEEC
Confidence            999874

>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A

Probab=99.44  E-value=9.5e-13  Score=102.26  Aligned_cols=85  Identities=26%  Similarity=0.381  Sum_probs=74.0

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ...+.|.+.| ..++|||++.++... .+++|..|.+||||+++|.|++||+|++|||.++.+.++.++..+++..++.+
T Consensus        23 ~~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v  102 (114)
T 2gzv_A           23 MVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEV  102 (114)
T ss_dssp             CCCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence            4568899999 556699999987432 37999999999999999966999999999999999999999999999888889


Q ss_pred             EEEEEeC
Q psy14174        211 TFKLIPA  217 (269)
Q Consensus       211 ~l~v~p~  217 (269)
                      .|+|.+.
T Consensus       103 ~l~v~~~  109 (114)
T 2gzv_A          103 TIHYNKL  109 (114)
T ss_dssp             EEEEECC
T ss_pred             EEEEEec
Confidence            9988764

>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}

Probab=99.44  E-value=5.9e-13  Score=102.83  Aligned_cols=80  Identities=19%  Similarity=0.273  Sum_probs=71.9

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe-EEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT-ITF  212 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~-v~l  212 (269)
                      ..|.|.|.|+..+|||++.+.   .+++|..|.+||||+++| |++||+|++|||.++.++++.++..+++..++. +.|
T Consensus        23 ~~r~v~l~k~~~~~G~~l~~~---~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l   98 (109)
T 2vsv_A           23 MPRSIRFTAEEGDLGFTLRGN---APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEM   98 (109)
T ss_dssp             SCEEEEECCGGGCCCEEEESS---SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEE
T ss_pred             CCEEEEEEeCCCceeEEEeCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEE
Confidence            358899999888999999764   578999999999999999 699999999999999999999999999988775 999


Q ss_pred             EEEeC
Q psy14174        213 KLIPA  217 (269)
Q Consensus       213 ~v~p~  217 (269)
                      +|.+.
T Consensus        99 ~V~~~  103 (109)
T 2vsv_A           99 KVVSL  103 (109)
T ss_dssp             EEESC
T ss_pred             EEEEC
Confidence            99874

>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B

Probab=99.44  E-value=2.3e-12  Score=99.21  Aligned_cols=84  Identities=26%  Similarity=0.388  Sum_probs=73.9

Q ss_pred             eEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC-CCeEEE
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-EGTITF  212 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~-~~~v~l  212 (269)
                      +..|.+.| ...+|||++.++.+..+++|..|.+||||+++|+|++||+|++|||.++.++++.++..+++.. +..+.|
T Consensus         2 ~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l   81 (112)
T 1qau_A            2 VISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVV   81 (112)
T ss_dssp             EEEEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEE
T ss_pred             EEEEEEEcCCCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEE
Confidence            45678888 5789999999876556899999999999999996699999999999999999999999999874 678999


Q ss_pred             EEEeCC
Q psy14174        213 KLIPAD  218 (269)
Q Consensus       213 ~v~p~~  218 (269)
                      ++.+..
T Consensus        82 ~v~R~g   87 (112)
T 1qau_A           82 LILRGP   87 (112)
T ss_dssp             EEEECC
T ss_pred             EEEeCC
Confidence            999865

>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A

Probab=99.44  E-value=1.2e-12  Score=97.85  Aligned_cols=78  Identities=23%  Similarity=0.379  Sum_probs=68.1

Q ss_pred             EEEEeeCCCCCCeEEeccCC---------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        137 IVQLVKSNEPLGATIKTDEE---------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       137 ~V~l~k~~~~lG~ti~~~~~---------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      .|.+.|+. +|||+|.++..         ..+++|..|.++|||++ | |++||+|++|||+++.++++.+++..++..+
T Consensus         6 ~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~   82 (95)
T 1mfg_A            6 RVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ   82 (95)
T ss_dssp             EEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred             EEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhcCC
Confidence            45666644 89999998642         34899999999999999 8 6999999999999999999999999999889


Q ss_pred             CeEEEEEEeC
Q psy14174        208 GTITFKLIPA  217 (269)
Q Consensus       208 ~~v~l~v~p~  217 (269)
                      ..+.|+|.+.
T Consensus        83 ~~v~l~v~R~   92 (95)
T 1mfg_A           83 NTVELIIVRE   92 (95)
T ss_dssp             SEEEEEEEEE
T ss_pred             CeEEEEEEeC
Confidence            9999999874

>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}

Probab=99.43  E-value=2.4e-12  Score=100.95  Aligned_cols=87  Identities=31%  Similarity=0.515  Sum_probs=74.5

Q ss_pred             CCCceEEEEEeeCCCCCCeEEeccCCC----CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        131 EEETVKIVQLVKSNEPLGATIKTDEES----GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       131 ~~~~~r~V~l~k~~~~lG~ti~~~~~~----~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      ++.....+.+.++..+|||++.++...    .+++|..|.+||||+++|.|++||+|++|||+++.++++.++..+++..
T Consensus        27 ~~~~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~  106 (121)
T 2kom_A           27 KIGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRST  106 (121)
T ss_dssp             CSCEEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred             cCCeEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence            334456677888888999999987432    5899999999999999996699999999999999999999999999874


Q ss_pred             --CCeEEEEEEeC
Q psy14174        207 --EGTITFKLIPA  217 (269)
Q Consensus       207 --~~~v~l~v~p~  217 (269)
                        +..+.|+|.+.
T Consensus       107 ~~g~~v~l~v~R~  119 (121)
T 2kom_A          107 KMEGTVSLLVFRQ  119 (121)
T ss_dssp             CSSCEEEEEEEEC
T ss_pred             CCCCEEEEEEEeC
Confidence              78899999874

>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}

Probab=99.42  E-value=3.3e-13  Score=119.54  Aligned_cols=85  Identities=24%  Similarity=0.395  Sum_probs=76.6

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhc-CCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRS-GLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~-GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      ..+|.|.|.| .+.+|||+|.++.+. .+++|.+|.+||||+++ | |++||+|++|||+++.++++.+++.+++..++.
T Consensus        76 ~~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~  154 (263)
T 1z87_A           76 LQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKTGKE  154 (263)
T ss_dssp             CSSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSC
T ss_pred             CccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHHhcCCCe
Confidence            3578999999 579999999998543 48999999999999995 6 799999999999999999999999999999999


Q ss_pred             EEEEEEeCC
Q psy14174        210 ITFKLIPAD  218 (269)
Q Consensus       210 v~l~v~p~~  218 (269)
                      |+|+|.+..
T Consensus       155 V~L~V~R~~  163 (263)
T 1z87_A          155 VVLEVKYMK  163 (263)
T ss_dssp             CCEEEECCS
T ss_pred             EEEEEEeCc
Confidence            999999854

>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}

Probab=99.42  E-value=2.1e-12  Score=96.70  Aligned_cols=82  Identities=23%  Similarity=0.479  Sum_probs=72.6

Q ss_pred             EEEEEeeCCCCCCeEEeccCC-------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        136 KIVQLVKSNEPLGATIKTDEE-------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       136 r~V~l~k~~~~lG~ti~~~~~-------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ..+.+.+...+|||++.++..       ..+++|..|.+||||+++| |++||+|++|||.++.+.++.++...++..+.
T Consensus         5 ~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~   83 (97)
T 2w4f_A            5 LTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGT   83 (97)
T ss_dssp             EEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred             EEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCCCC
Confidence            446788888899999997532       3589999999999999999 69999999999999999999888888888999


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .+.|+|.+..
T Consensus        84 ~v~l~v~R~g   93 (97)
T 2w4f_A           84 AVQMRVWRER   93 (97)
T ss_dssp             EEEEEEECCS
T ss_pred             eEEEEEEeCC
Confidence            9999999864

>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.42  E-value=1.5e-12  Score=96.92  Aligned_cols=68  Identities=31%  Similarity=0.619  Sum_probs=62.4

Q ss_pred             CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeC
Q psy14174        143 SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPA  217 (269)
Q Consensus       143 ~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~  217 (269)
                      ...+|||++.++      +|.+|.+||||+++| |++||+|++|||.++.+.++.++..+++..+..+.|+|.|.
T Consensus        22 ~~~~lG~~~~~G------~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p~   89 (90)
T 1y7n_A           22 LRYQLGFSVQNG------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPA   89 (90)
T ss_dssp             TTSCCCEEEETT------EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEECC
T ss_pred             CccccCeEecCC------EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence            677899998542      899999999999999 79999999999999999999999999998899999999885

>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1

Probab=99.42  E-value=1.7e-12  Score=98.41  Aligned_cols=84  Identities=18%  Similarity=0.385  Sum_probs=71.4

Q ss_pred             eEEEEEee-CCCCCCeEEeccCC----------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHH
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEE----------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL  203 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~----------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l  203 (269)
                      .+.|.+.| ....|||++.+...          ..+++|..|.+||||+++|.|++||+|++|||.++.++++.++..++
T Consensus         5 p~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l   84 (103)
T 2fcf_A            5 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI   84 (103)
T ss_dssp             CEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred             CEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence            36788888 55789999987532          14899999999999999996699999999999999999999999999


Q ss_pred             HcCCCeEEEEEEeCC
Q psy14174        204 QSSEGTITFKLIPAD  218 (269)
Q Consensus       204 ~~~~~~v~l~v~p~~  218 (269)
                      +..++.+.|+|.+..
T Consensus        85 ~~~~~~v~l~v~r~~   99 (103)
T 2fcf_A           85 RKAGNPVVFMVQSII   99 (103)
T ss_dssp             HTCCSSEEEEEECCC
T ss_pred             HhCCCcEEEEEEECC
Confidence            998889999998753

>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.9e-12  Score=97.81  Aligned_cols=86  Identities=29%  Similarity=0.510  Sum_probs=74.8

Q ss_pred             CCCceEEEEEee-CCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        131 EEETVKIVQLVK-SNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       131 ~~~~~r~V~l~k-~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ..+.++.|.|.| ....|||++.+... ..+++|..|.++|||+++| |++||+|++|||.++.+.++.++...++. +.
T Consensus         7 ~~~~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~   84 (100)
T 2eeh_A            7 GSDIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-SS   84 (100)
T ss_dssp             CCCEECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-CS
T ss_pred             CCCeEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-CC
Confidence            345688899999 45569999998743 2489999999999999999 69999999999999999999999999987 78


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .+.|+|.+..
T Consensus        85 ~v~l~v~R~g   94 (100)
T 2eeh_A           85 RLHMMVRRMG   94 (100)
T ss_dssp             SEEEEEEECS
T ss_pred             EEEEEEEECC
Confidence            9999999865

>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.42  E-value=4.7e-12  Score=97.18  Aligned_cols=84  Identities=23%  Similarity=0.477  Sum_probs=74.5

Q ss_pred             ceEEEEEeeCCCCCCeEEeccC-------CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDE-------ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~-------~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      ....+.+.+...+|||++.++.       ...+++|..|.++|||+++| |++||+|++|||+++.+.++.++...++..
T Consensus        15 ~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~   93 (110)
T 1x5q_A           15 EELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGA   93 (110)
T ss_dssp             EEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred             ceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhhCC
Confidence            4456788888889999999763       23589999999999999999 699999999999999999999999999888


Q ss_pred             CCeEEEEEEeCC
Q psy14174        207 EGTITFKLIPAD  218 (269)
Q Consensus       207 ~~~v~l~v~p~~  218 (269)
                      +..+.|+|.+..
T Consensus        94 g~~v~l~v~R~g  105 (110)
T 1x5q_A           94 GTAVQMRVWRES  105 (110)
T ss_dssp             CSEEEEEEEECS
T ss_pred             CCeEEEEEEECC
Confidence            999999999864

>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}

Probab=99.42  E-value=1.6e-12  Score=97.02  Aligned_cols=82  Identities=28%  Similarity=0.439  Sum_probs=72.3

Q ss_pred             EEEEEeeCCCCCCeEEeccC-----CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        136 KIVQLVKSNEPLGATIKTDE-----ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       136 r~V~l~k~~~~lG~ti~~~~-----~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ..+.+.++..+|||++.++.     ...+++|..|.+||||+++|.|++||+|++|||.++.++++.++..+++..+..+
T Consensus         6 ~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v   85 (97)
T 2iwn_A            6 FDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTV   85 (97)
T ss_dssp             EEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEE
T ss_pred             EEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence            44677778889999999873     2458999999999999999966999999999999999999999999999888999


Q ss_pred             EEEEEeC
Q psy14174        211 TFKLIPA  217 (269)
Q Consensus       211 ~l~v~p~  217 (269)
                      .|+|.+.
T Consensus        86 ~l~v~r~   92 (97)
T 2iwn_A           86 LLTLMRR   92 (97)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEeC
Confidence            9999874

>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*

Probab=99.41  E-value=2.8e-12  Score=95.03  Aligned_cols=75  Identities=16%  Similarity=0.325  Sum_probs=67.8

Q ss_pred             CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        143 SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       143 ~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      ++.+|||++.++... .+++|..|.++|||+++| |++||+|++|||.++.+..+.++..+++..+..+.|++.+..
T Consensus        11 ~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g   86 (91)
T 2pkt_A           11 GPGPWGFRLVGGKDFEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSE   86 (91)
T ss_dssp             SSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEEEC
T ss_pred             CCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence            567999999987433 489999999999999999 699999999999999999999999999998899999998854

>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A

Probab=99.41  E-value=1.6e-12  Score=98.74  Aligned_cols=80  Identities=23%  Similarity=0.368  Sum_probs=70.2

Q ss_pred             eEEEEEeeCCCCCCeEEeccC---------CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        135 VKIVQLVKSNEPLGATIKTDE---------ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~---------~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      ...|.+.|+. +|||++.++.         ...+++|..|.++|||++ | |++||+|++|||.++.+.++.++...++.
T Consensus        12 ~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~   88 (103)
T 1n7t_A           12 EIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKT   88 (103)
T ss_dssp             CEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred             EEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHHhhc
Confidence            4557777754 8999999864         235899999999999999 8 69999999999999999999999999998


Q ss_pred             CCCeEEEEEEeC
Q psy14174        206 SEGTITFKLIPA  217 (269)
Q Consensus       206 ~~~~v~l~v~p~  217 (269)
                      .+..+.|+|.+.
T Consensus        89 ~g~~v~l~v~R~  100 (103)
T 1n7t_A           89 FQNTVELIIVRE  100 (103)
T ss_dssp             CCSEEEEEEECC
T ss_pred             CCCeEEEEEEec
Confidence            899999999874

>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A

Probab=99.41  E-value=2.8e-12  Score=97.93  Aligned_cols=83  Identities=20%  Similarity=0.342  Sum_probs=73.0

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCC-------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEE-------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~-------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      ..+.|.|.| .+.+|||++.++.+       ..+++|.+|.+||||+ +| |++||+|++|||.++.++++.++...++.
T Consensus         7 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~   84 (107)
T 2h2b_A            7 EQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLRK   84 (107)
T ss_dssp             EEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred             eeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhhC
Confidence            467899999 46899999998753       3499999999999999 88 69999999999999999999988888888


Q ss_pred             CCCeEEEEEEeCC
Q psy14174        206 SEGTITFKLIPAD  218 (269)
Q Consensus       206 ~~~~v~l~v~p~~  218 (269)
                      .+..+.|+|.+..
T Consensus        85 ~g~~v~l~v~R~~   97 (107)
T 2h2b_A           85 SGKNAKITIRRKK   97 (107)
T ss_dssp             CCSEEEEEEEEES
T ss_pred             CCCEEEEEEEECC
Confidence            8999999998754

>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}

Probab=99.40  E-value=2e-12  Score=101.84  Aligned_cols=84  Identities=18%  Similarity=0.385  Sum_probs=73.2

Q ss_pred             eEEEEEee-CCCCCCeEEeccCC----------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHH
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEE----------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL  203 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~----------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l  203 (269)
                      .+.+.+.| ...+|||++.++..          ..+++|..|.+||||+++|.|++||+|++|||+++.++++.++..++
T Consensus        25 p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l  104 (123)
T 2iwq_A           25 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI  104 (123)
T ss_dssp             CEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred             CEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence            37788888 56799999986521          24899999999999999996699999999999999999999999999


Q ss_pred             HcCCCeEEEEEEeCC
Q psy14174        204 QSSEGTITFKLIPAD  218 (269)
Q Consensus       204 ~~~~~~v~l~v~p~~  218 (269)
                      +..++.+.|+|.+..
T Consensus       105 ~~~~~~v~l~v~r~~  119 (123)
T 2iwq_A          105 RKAGNPVVFMVQSII  119 (123)
T ss_dssp             HHCCSSEEEEEECCC
T ss_pred             HcCCCeEEEEEEECC
Confidence            988889999998753

>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}

Probab=99.39  E-value=1.8e-12  Score=100.38  Aligned_cols=83  Identities=19%  Similarity=0.436  Sum_probs=74.9

Q ss_pred             eEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      .+.+.+.+ ..+.|||++..+....+++|..|.+||||+++| |++||+|++|||.++.+.++.++..+++..+..+.|+
T Consensus        14 p~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~   92 (114)
T 2edz_A           14 PRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLL   92 (114)
T ss_dssp             CEEEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEE
T ss_pred             CEEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence            47788888 678999999987556799999999999999999 6999999999999999999999999999889999999


Q ss_pred             EEeCC
Q psy14174        214 LIPAD  218 (269)
Q Consensus       214 v~p~~  218 (269)
                      |.+..
T Consensus        93 v~R~~   97 (114)
T 2edz_A           93 VLDGD   97 (114)
T ss_dssp             EECHH
T ss_pred             EEECC
Confidence            98854

>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.39  E-value=1.4e-12  Score=103.37  Aligned_cols=83  Identities=25%  Similarity=0.356  Sum_probs=74.2

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v  210 (269)
                      .....+.+.|+..+|||++.+.  ..+++|..|.+||||+++|.|++||+|++|||.++.+.++.+++.+++.  .+..+
T Consensus        26 ~~~~~~~l~k~~~glG~~i~~~--~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v  103 (126)
T 1wif_A           26 NKVIQTKLTVGNLGLGLVVIQN--GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVL  103 (126)
T ss_dssp             CCEEEEEEECCTTCCCCCEEEE--TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEE
T ss_pred             CceEEEEEecCCceEeEEEEcC--CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEE
Confidence            4566788999889999999875  4589999999999999999779999999999999999999999999987  47889


Q ss_pred             EEEEEeC
Q psy14174        211 TFKLIPA  217 (269)
Q Consensus       211 ~l~v~p~  217 (269)
                      +|+|.+.
T Consensus       104 ~l~V~R~  110 (126)
T 1wif_A          104 QIKAYRG  110 (126)
T ss_dssp             EEEEESS
T ss_pred             EEEEEEC
Confidence            9999874

>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.7e-12  Score=97.00  Aligned_cols=82  Identities=18%  Similarity=0.273  Sum_probs=70.9

Q ss_pred             eEEEEEeeCCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      .+.|.+ +...+|||++.++.+. .+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+..+.|+
T Consensus         9 ~~~v~l-~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~   86 (94)
T 2eeg_A            9 PHSVTL-RGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLS   86 (94)
T ss_dssp             CEEEEE-CCSSCCSCCEECCTTTTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEEE
T ss_pred             eEEEEE-eCCCccCEEEECccCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence            355667 4456999999987543 489999999999999999 6999999999999999999999999998888899999


Q ss_pred             EEeCC
Q psy14174        214 LIPAD  218 (269)
Q Consensus       214 v~p~~  218 (269)
                      |.+..
T Consensus        87 v~R~g   91 (94)
T 2eeg_A           87 VSSGP   91 (94)
T ss_dssp             EECCS
T ss_pred             EEeCC
Confidence            98753

>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.38  E-value=1.7e-12  Score=98.22  Aligned_cols=85  Identities=22%  Similarity=0.372  Sum_probs=72.5

Q ss_pred             CCceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhc-CCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        132 EETVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRS-GLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       132 ~~~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~-GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      .+..+.+.+.+ +..+|||++.++... .+++|.+|.++|||+++ | |++||+|++|||+++.+. +.+++.+++..+.
T Consensus         7 ~~~~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~   84 (100)
T 2edp_A            7 GGSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGS-RQEALILIKGSFR   84 (100)
T ss_dssp             CCCCEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSC-SHHHHHHHHTCCS
T ss_pred             CCCcEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccch-HHHHHHHHHhCCC
Confidence            45566777777 557999999987432 47999999999999999 6 799999999999999886 8899999998888


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .+.|+|.+..
T Consensus        85 ~v~l~v~R~~   94 (100)
T 2edp_A           85 ILKLIVRRRN   94 (100)
T ss_dssp             SCEEEEEECC
T ss_pred             eEEEEEEeCC
Confidence            9999998854

>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A

Probab=99.38  E-value=2.2e-12  Score=97.01  Aligned_cols=79  Identities=19%  Similarity=0.348  Sum_probs=65.2

Q ss_pred             ceEEEEEeeCC---CCCCeEEeccC--CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        134 TVKIVQLVKSN---EPLGATIKTDE--ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       134 ~~r~V~l~k~~---~~lG~ti~~~~--~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ..|.|++.|+.   .+|||++....  ...+++|..|.+||||+++| |+.||+|++|||+++.+++++++..++++  .
T Consensus         6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~--~   82 (94)
T 3kzd_A            6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ--P   82 (94)
T ss_dssp             EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS--S
T ss_pred             ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC--C
Confidence            46889999943   48999998743  23489999999999999999 69999999999999999999999999975  4


Q ss_pred             eEEEEEE
Q psy14174        209 TITFKLI  215 (269)
Q Consensus       209 ~v~l~v~  215 (269)
                      .++++|.
T Consensus        83 ~l~ltV~   89 (94)
T 3kzd_A           83 SLGLLVR   89 (94)
T ss_dssp             EEEEEEE
T ss_pred             eEEEEEE
Confidence            4555554

>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1

Probab=99.38  E-value=2.7e-12  Score=101.12  Aligned_cols=87  Identities=26%  Similarity=0.387  Sum_probs=75.9

Q ss_pred             CCceEEEEEeeC-CCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC-CCe
Q psy14174        132 EETVKIVQLVKS-NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-EGT  209 (269)
Q Consensus       132 ~~~~r~V~l~k~-~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~-~~~  209 (269)
                      .+.++.|.+.|+ ..+|||++.+..+..+++|..|.+||||+++|+|++||+|++|||.++.++++.++..+++.. +..
T Consensus         6 ~~~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~   85 (127)
T 1b8q_A            6 EPNVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASET   85 (127)
T ss_dssp             CCCSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSC
T ss_pred             CCceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCe
Confidence            345778899994 589999999875556899999999999999996699999999999999999999999999874 578


Q ss_pred             EEEEEEeCC
Q psy14174        210 ITFKLIPAD  218 (269)
Q Consensus       210 v~l~v~p~~  218 (269)
                      +.|++.+..
T Consensus        86 v~l~v~R~g   94 (127)
T 1b8q_A           86 HVVLILRGP   94 (127)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEEEeCC
Confidence            999998864

>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}

Probab=99.38  E-value=4.3e-12  Score=99.93  Aligned_cols=85  Identities=21%  Similarity=0.340  Sum_probs=74.2

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe-E
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT-I  210 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~-v  210 (269)
                      ....|+|.+.|...+|||++.++....+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++...+. +
T Consensus         7 ~~~~r~v~l~~~~~g~G~~l~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~   85 (128)
T 2kjd_A            7 MLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK   85 (128)
T ss_dssp             TCCCEEEEEECCSSSCCEEEEECSSSCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEE
T ss_pred             CCCcEEEEEecCCCcccEEEEecCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEE
Confidence            34568899999888999999988655699999999999999999 699999999999999999999999999887554 5


Q ss_pred             EEEEEeC
Q psy14174        211 TFKLIPA  217 (269)
Q Consensus       211 ~l~v~p~  217 (269)
                      .+++.+.
T Consensus        86 ~l~v~R~   92 (128)
T 2kjd_A           86 LLVVDRE   92 (128)
T ss_dssp             EEEECHH
T ss_pred             EEEEEeC
Confidence            6777764

>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.37  E-value=2.8e-12  Score=100.52  Aligned_cols=86  Identities=21%  Similarity=0.324  Sum_probs=74.5

Q ss_pred             CceEEEEEee-CCCCCCeEEeccC-----CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDE-----ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~-----~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      ...+.|.+.| ...+|||++.++.     ...+++|..|.+++||+++|.|++||+|++|||+++.+++++++..+++..
T Consensus        14 ~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~   93 (122)
T 1v5q_A           14 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS   93 (122)
T ss_dssp             EEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHH
T ss_pred             ceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence            3467788998 4699999999762     235799999999999999996699999999999999999999999999875


Q ss_pred             --CCeEEEEEEeCC
Q psy14174        207 --EGTITFKLIPAD  218 (269)
Q Consensus       207 --~~~v~l~v~p~~  218 (269)
                        +..+.|+|.+..
T Consensus        94 ~~g~~v~l~v~R~~  107 (122)
T 1v5q_A           94 SITSKVTLEIEFDV  107 (122)
T ss_dssp             TTTTCEEEEEEEEC
T ss_pred             CCCCeEEEEEEECC
Confidence              679999998854

>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}

Probab=99.37  E-value=2e-12  Score=98.38  Aligned_cols=79  Identities=25%  Similarity=0.439  Sum_probs=68.6

Q ss_pred             eEEEEEee-CCCCCCeEEecc--------CCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        135 VKIVQLVK-SNEPLGATIKTD--------EESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~--------~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      .+.+.+.| .+++|||++.+.        ....+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++.
T Consensus        16 ~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~   94 (104)
T 2z17_A           16 RKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRS   94 (104)
T ss_dssp             CCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHH
T ss_pred             ceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence            35577888 578999999973        123589999999999999999 79999999999999999999999999998


Q ss_pred             CCCeEEEEE
Q psy14174        206 SEGTITFKL  214 (269)
Q Consensus       206 ~~~~v~l~v  214 (269)
                      .++.++|+|
T Consensus        95 ~~~~v~l~v  103 (104)
T 2z17_A           95 SGNLLTIET  103 (104)
T ss_dssp             TTTEEEEEC
T ss_pred             CCCcEEEEE
Confidence            888888765

>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.6e-13  Score=106.24  Aligned_cols=84  Identities=32%  Similarity=0.523  Sum_probs=73.7

Q ss_pred             ceEEEEEeeCCCCCCeEEecc-------------------C----------CCCcEEEEEecCCChhhhcCCCCCCCeEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTD-------------------E----------ESGKIVVARVMHGGAADRSGLIHVGDEVC  184 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~-------------------~----------~~~~i~V~~V~~gg~A~r~GlL~~GD~Il  184 (269)
                      ..|.|.|.|+..+|||++.+.                   .          ...+++|..|.++|||+++| |++||+|+
T Consensus         8 ~~r~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~   86 (126)
T 2yuy_A            8 GPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRII   86 (126)
T ss_dssp             SCCCEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCCC
T ss_pred             CCEEEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEEE
Confidence            457799999888999999851                   0          12469999999999999999 69999999


Q ss_pred             EECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        185 EVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       185 ~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      +|||+++.++++.+++.+++..+..+.|+|.+..
T Consensus        87 ~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~  120 (126)
T 2yuy_A           87 KVNGESVIGKTYSQVIALIQNSDTTLELSVMPKD  120 (126)
T ss_dssp             EETTEECSSCCHHHHHHHHHTCTTEEEEECCCCC
T ss_pred             EECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence            9999999999999999999999999999998854

>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}

Probab=99.06  E-value=4.8e-14  Score=109.39  Aligned_cols=82  Identities=33%  Similarity=0.622  Sum_probs=72.0

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhh-cCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADR-SGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r-~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      ..+|.|.+.| .+++|||++.++... .+++|.+|.+||||++ +| |++||+|++|||.++.+.++.++..+++..++.
T Consensus        26 ~~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~  104 (112)
T 2lob_A           26 QGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE  104 (112)
Confidence            4578889988 678999999987433 4899999999999999 67 699999999999999999999999999988888


Q ss_pred             EEEEEE
Q psy14174        210 ITFKLI  215 (269)
Q Consensus       210 v~l~v~  215 (269)
                      ++|+|.
T Consensus       105 v~l~V~  110 (112)
T 2lob_A          105 IEFEVV  110 (112)
Confidence            888764

>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.36  E-value=3.5e-12  Score=96.48  Aligned_cols=82  Identities=22%  Similarity=0.268  Sum_probs=72.4

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      -....+.+.+...+|||++...   .+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..++.+.|
T Consensus        14 ~~~~~v~l~~~~~g~G~~~~~~---~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l   89 (100)
T 1whd_A           14 GEKLQITIRRGKDGFGFTICCD---SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIIL   89 (100)
T ss_dssp             CEEEEEEEECCSSSSSCBCCCS---SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEE
T ss_pred             cceEEEEEECCCCeeeEEEeCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence            3445578888778999999875   579999999999999999 699999999999999999999999999988888999


Q ss_pred             EEEeCC
Q psy14174        213 KLIPAD  218 (269)
Q Consensus       213 ~v~p~~  218 (269)
                      +|.+..
T Consensus        90 ~v~R~~   95 (100)
T 1whd_A           90 LVWRVS   95 (100)
T ss_dssp             EEEECC
T ss_pred             EEEECC
Confidence            998853

>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.36  E-value=3.4e-12  Score=96.94  Aligned_cols=81  Identities=22%  Similarity=0.433  Sum_probs=70.7

Q ss_pred             EEEEEeeCCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        136 KIVQLVKSNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       136 r~V~l~k~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      ..|.+. ++.+|||++.++.+. .+++|.+|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+.|+|
T Consensus         7 ~~v~l~-~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v   84 (103)
T 1wf7_A            7 GSVSLV-GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTL   84 (103)
T ss_dssp             EEEEEE-SSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEEEE
T ss_pred             EEEEEe-CCCccCEEEeccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence            445666 567899999987543 379999999999999999 69999999999999999999999999988889999999


Q ss_pred             EeCC
Q psy14174        215 IPAD  218 (269)
Q Consensus       215 ~p~~  218 (269)
                      .+..
T Consensus        85 ~R~g   88 (103)
T 1wf7_A           85 QRAS   88 (103)
T ss_dssp             CCCS
T ss_pred             EeCC
Confidence            8754

>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.35  E-value=2.7e-12  Score=95.86  Aligned_cols=80  Identities=19%  Similarity=0.331  Sum_probs=69.7

Q ss_pred             EEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEE
Q psy14174        138 VQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLI  215 (269)
Q Consensus       138 V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~  215 (269)
                      +.+.+ +..+|||++.++... .+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+.|+|.
T Consensus         8 ~~~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~   86 (94)
T 1vb7_A            8 LTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLD   86 (94)
T ss_dssp             EEEEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEE
T ss_pred             EEEEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEE
Confidence            34444 778999999986433 489999999999999999 699999999999999999999999999988889999998


Q ss_pred             eCC
Q psy14174        216 PAD  218 (269)
Q Consensus       216 p~~  218 (269)
                      +..
T Consensus        87 R~g   89 (94)
T 1vb7_A           87 RSS   89 (94)
T ss_dssp             CCC
T ss_pred             ECC
Confidence            864

>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.34  E-value=7.4e-12  Score=97.22  Aligned_cols=84  Identities=33%  Similarity=0.473  Sum_probs=74.5

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      ..+|.|.+.+...+|||++.++.. .+++|..|.++|||+++| |++||+|++|||+++.++++.++...++..+..+.|
T Consensus        18 ~~~~~v~l~~~~~~lG~~~~~~~~-~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l   95 (117)
T 1uit_A           18 EEPRHVKVQKGSEPLGISIVSGEK-GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITI   95 (117)
T ss_dssp             CCCEEEEEECSSCCCCEEEEECTT-SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEE
T ss_pred             CCCEEEEEEeCCCCccEEEEccCC-CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence            456789999977899999988743 589999999999999999 699999999999999999988888777788899999


Q ss_pred             EEEeCC
Q psy14174        213 KLIPAD  218 (269)
Q Consensus       213 ~v~p~~  218 (269)
                      +|.+..
T Consensus        96 ~v~r~~  101 (117)
T 1uit_A           96 LAQYNP  101 (117)
T ss_dssp             EECCCS
T ss_pred             EEEECC
Confidence            998754

>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.33  E-value=2.2e-11  Score=91.55  Aligned_cols=80  Identities=20%  Similarity=0.310  Sum_probs=69.0

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCeEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~v~  211 (269)
                      ....+.+.|...+|||+|...  ..+++|..|.++  |+++| |++||+|++|||+++.++++.+++.+++..  +..+.
T Consensus        10 ~~~~v~l~~~~~g~G~~i~~~--~~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~   84 (96)
T 1ujv_A           10 ELMTLTIVKGAQGFGFTIADS--PTGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETS   84 (96)
T ss_dssp             CCEEEEEECCSSSSSEEEEEE--TTEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEE
T ss_pred             eEEEEEEEeCCCceeEEEEcC--CCCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEE
Confidence            345678999889999999865  348999999984  67888 699999999999999999999999999984  68899


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      |+|.+..
T Consensus        85 l~v~R~g   91 (96)
T 1ujv_A           85 LIIHRGS   91 (96)
T ss_dssp             EEEECCS
T ss_pred             EEEEECC
Confidence            9998854

>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A

Probab=99.32  E-value=1.2e-11  Score=93.88  Aligned_cols=81  Identities=28%  Similarity=0.401  Sum_probs=67.4

Q ss_pred             eEEEEEeeCC----CCCCeEEeccCC-------------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChH
Q psy14174        135 VKIVQLVKSN----EPLGATIKTDEE-------------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPG  197 (269)
Q Consensus       135 ~r~V~l~k~~----~~lG~ti~~~~~-------------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~  197 (269)
                      ++.+.+.|..    .+|||++.++.+             ..+++|..|.++|||+++| |++||+|++|||.++.+.+++
T Consensus         5 ~~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~   83 (104)
T 3sfj_A            5 VQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHD   83 (104)
T ss_dssp             EEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHH
T ss_pred             eEEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHH
Confidence            4556777622    259999996532             3479999999999999999 799999999999999999999


Q ss_pred             HHHHHHHcC-CCeEEEEEEe
Q psy14174        198 DVLKILQSS-EGTITFKLIP  216 (269)
Q Consensus       198 ~~~~~l~~~-~~~v~l~v~p  216 (269)
                      ++...++.. +..+.|+|.+
T Consensus        84 ~~~~~l~~~~g~~v~l~v~R  103 (104)
T 3sfj_A           84 QARKRLTKRSEEVVRLLVTR  103 (104)
T ss_dssp             HHHHHHTCTTCSEEEEEEEE
T ss_pred             HHHHHHHhCCCCEEEEEEEc
Confidence            999999864 5788998875

>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}

Probab=99.32  E-value=1.2e-11  Score=104.49  Aligned_cols=85  Identities=27%  Similarity=0.432  Sum_probs=75.4

Q ss_pred             CCceEEEEEee-CCCCCCeEEeccCC-CCcEEEEEecCCChhhhc-CCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        132 EETVKIVQLVK-SNEPLGATIKTDEE-SGKIVVARVMHGGAADRS-GLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       132 ~~~~r~V~l~k-~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~-GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ....+.|.+.| .+.+|||++.++.. ..+++|..|.+||||+++ | |++||+|++|||+++.+++|.++..+++..+.
T Consensus         5 ~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~agg-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~   83 (200)
T 2qt5_A            5 FKGSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQ-LDVGDYIKAVNGINLAKFRHDEIISLLKNVGE   83 (200)
T ss_dssp             CEEEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTS-CCTTCEEEEETTEECTTSCHHHHHHHHHTCCS
T ss_pred             cCCCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence            34568888888 78899999998743 357999999999999999 6 79999999999999999999999999999999


Q ss_pred             eEEEEEEeC
Q psy14174        209 TITFKLIPA  217 (269)
Q Consensus       209 ~v~l~v~p~  217 (269)
                      .+.|++.+.
T Consensus        84 ~v~l~v~R~   92 (200)
T 2qt5_A           84 RVVLEVEYE   92 (200)
T ss_dssp             EEEEEEEEE
T ss_pred             eEEEEEecc
Confidence            999999864

>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.32  E-value=4.3e-12  Score=95.33  Aligned_cols=81  Identities=20%  Similarity=0.329  Sum_probs=71.6

Q ss_pred             CceEEEEEeeCC--CCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        133 ETVKIVQLVKSN--EPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k~~--~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ...+.|.|.|..  .+|||.+.+.   .+++|..|.+||||+ +| |++||+|++|||.++.++++.++..+++..+..+
T Consensus         7 ~~~~~v~l~~~~~~~~~G~~l~~~---~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v   81 (96)
T 2edv_A            7 GVRHTVKIDKDTLLQDYGFHISES---LPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAEDSL   81 (96)
T ss_dssp             CEEEEEEECCCSSSCSCSBCCCSS---SSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCE
T ss_pred             CccEEEEEEECCCCCcccEEEecC---CCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence            346788999944  5899999873   589999999999996 77 6999999999999999999999999999899999


Q ss_pred             EEEEEeCC
Q psy14174        211 TFKLIPAD  218 (269)
Q Consensus       211 ~l~v~p~~  218 (269)
                      .|+|.+..
T Consensus        82 ~l~v~R~~   89 (96)
T 2edv_A           82 SITVVRCT   89 (96)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEECC
Confidence            99999864

>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A

Probab=99.32  E-value=9.5e-12  Score=99.95  Aligned_cols=85  Identities=28%  Similarity=0.391  Sum_probs=72.1

Q ss_pred             CceEEEEEeeCC----CCCCeEEeccCC-------------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCC
Q psy14174        133 ETVKIVQLVKSN----EPLGATIKTDEE-------------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT  195 (269)
Q Consensus       133 ~~~r~V~l~k~~----~~lG~ti~~~~~-------------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~  195 (269)
                      ..++.|.|.|.+    .+|||++.++.+             ..+++|..|.+||||+++| |++||+|++|||+++.+++
T Consensus        22 ~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~  100 (139)
T 2vz5_A           22 SMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVT  100 (139)
T ss_dssp             CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCC
T ss_pred             CceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCC
Confidence            356778887732    379999987532             3589999999999999999 6999999999999999999


Q ss_pred             hHHHHHHHHc-CCCeEEEEEEeCC
Q psy14174        196 PGDVLKILQS-SEGTITFKLIPAD  218 (269)
Q Consensus       196 ~~~~~~~l~~-~~~~v~l~v~p~~  218 (269)
                      +.++..+++. .+..+.|+|.+.+
T Consensus       101 ~~~~~~~l~~~~g~~v~l~v~R~g  124 (139)
T 2vz5_A          101 HDQARKRLTKRSEEVVRLLVTRQS  124 (139)
T ss_dssp             HHHHHHHHCCTTCSEEEEEEEECC
T ss_pred             HHHHHHHHHhCCCCEEEEEEEECC
Confidence            9999999987 4578999998864

>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.31  E-value=5.5e-12  Score=95.33  Aligned_cols=85  Identities=27%  Similarity=0.440  Sum_probs=71.2

Q ss_pred             CCceEEEEEee--CCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        132 EETVKIVQLVK--SNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       132 ~~~~r~V~l~k--~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      .+.++.+.+.|  ...+|||++.++.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++. +.
T Consensus         6 ~~~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~   83 (101)
T 1uez_A            6 SGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG-SK   83 (101)
T ss_dssp             SCCCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS-SS
T ss_pred             CCccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC-CC
Confidence            45678888888  56799999988743 3589999999999999999 69999999999999999998777777644 56


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .+.|+|.+..
T Consensus        84 ~v~l~v~R~g   93 (101)
T 1uez_A           84 KLVLSVYSAG   93 (101)
T ss_dssp             SCCEEECCCC
T ss_pred             eEEEEEEECC
Confidence            7889988754

>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A

Probab=99.31  E-value=1.5e-11  Score=101.13  Aligned_cols=82  Identities=26%  Similarity=0.363  Sum_probs=70.3

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC-CCeE
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-EGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~-~~~v  210 (269)
                      ..+|.|.+.| ....|||++...  ..+++|..|.+||||+++| |+.||+|++|||.++.+++++....+++.. +..+
T Consensus         3 ~~~r~v~l~k~~~~~lG~~~~~~--~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v   79 (166)
T 1w9e_A            3 MDPREVILCKDQDGKIGLRLKSI--DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKI   79 (166)
T ss_dssp             CCCEEEEEECCTTSCCSEEEEEE--TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEE
T ss_pred             CCCEEEEEEeCCCCcEeEEEEeC--CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEE
Confidence            3568899999 667899999886  4689999999999999999 699999999999999999876777777765 4589


Q ss_pred             EEEEEeC
Q psy14174        211 TFKLIPA  217 (269)
Q Consensus       211 ~l~v~p~  217 (269)
                      .|++.+.
T Consensus        80 ~l~vr~~   86 (166)
T 1w9e_A           80 TMTIRDR   86 (166)
T ss_dssp             EEEEECC
T ss_pred             EEEEEcC
Confidence            9999553

>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=1.1e-11  Score=96.42  Aligned_cols=83  Identities=19%  Similarity=0.352  Sum_probs=70.5

Q ss_pred             CceEEEEEeeCCC---CCCeEEeccCCC--CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        133 ETVKIVQLVKSNE---PLGATIKTDEES--GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       133 ~~~r~V~l~k~~~---~lG~ti~~~~~~--~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      ..++.+.|.|.+.   +|||+|.+....  .+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.. 
T Consensus        14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-   91 (114)
T 2d8i_A           14 KVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQP-   91 (114)
T ss_dssp             CEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTSS-
T ss_pred             CceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC-
Confidence            4578899999443   799999874322  489999999999999999 699999999999999999999999999753 


Q ss_pred             CeEEEEEEeCC
Q psy14174        208 GTITFKLIPAD  218 (269)
Q Consensus       208 ~~v~l~v~p~~  218 (269)
                       .+.|+|.+..
T Consensus        92 -~v~l~v~R~p  101 (114)
T 2d8i_A           92 -SLGLLVRTYP  101 (114)
T ss_dssp             -EEEEEEEECC
T ss_pred             -cEEEEEEECC
Confidence             8888888754

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}

Probab=99.30  E-value=3.3e-11  Score=120.56  Aligned_cols=87  Identities=22%  Similarity=0.389  Sum_probs=78.2

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      +-..+.|.|.|+..+|||+|.||.+      ..+++|..|.+||||+++|.|++||+|++|||+++.+++|.+++.+++.
T Consensus        57 ~~~~~~v~l~k~~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~  136 (721)
T 2xkx_A           57 EMEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE  136 (721)
T ss_pred             CceEEEEEEEeCCCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhc
Confidence            4457889999977899999999753      3589999999999999999779999999999999999999999999999


Q ss_pred             CCCeEEEEEEeCC
Q psy14174        206 SEGTITFKLIPAD  218 (269)
Q Consensus       206 ~~~~v~l~v~p~~  218 (269)
                      ++..|.|+|.+..
T Consensus       137 ~g~~v~l~v~R~~  149 (721)
T 2xkx_A          137 AGSIVRLYVMRRK  149 (721)
T ss_pred             cccccceEEEecc
Confidence            9999999998754

>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A

Probab=99.30  E-value=2.8e-11  Score=95.25  Aligned_cols=82  Identities=18%  Similarity=0.343  Sum_probs=69.6

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHH--cCCCeEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQ--SSEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~--~~~~~v~  211 (269)
                      .++++.+. .+++|||++.++.. .+++|..|.++|||+++| |++||+|++|||+++.+++++++..+++  ..+..+.
T Consensus        29 ~~~~~~~~-~~~~lG~~l~~~~~-~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~  105 (124)
T 3tsv_A           29 SMKLVKFR-KGDSVGLRLAGGND-VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVT  105 (124)
T ss_dssp             CCEEEEEE-CSSCCCEEEEECTT-SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEE
T ss_pred             CeEEEEcC-CCCceeEEEecCCC-CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEE
Confidence            34554444 46799999998643 689999999999999999 7999999999999999999999999887  4778899


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      |+|.+..
T Consensus       106 l~v~R~~  112 (124)
T 3tsv_A          106 ILAQKKK  112 (124)
T ss_dssp             EEEEECH
T ss_pred             EEEEECC
Confidence            9998853

>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.28  E-value=2.4e-12  Score=99.62  Aligned_cols=79  Identities=20%  Similarity=0.340  Sum_probs=70.0

Q ss_pred             eEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC-eEEEE
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG-TITFK  213 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~-~v~l~  213 (269)
                      .|.|.+.|++.+|||++.+.   .+++|..|.++++|+++| |++||+|++|||+++.+++++++..+++..++ .+.|+
T Consensus        16 ~r~v~l~~~~~~~G~~l~~~---~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~   91 (111)
T 1vae_A           16 PRGIHFTVEEGDLGFTLRGN---TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMK   91 (111)
T ss_dssp             CCCCCEECCSSCCSCCEESS---SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEE
T ss_pred             CeEEEEEcCCCcccEEEeCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEE
Confidence            46688899889999999765   478999999999999999 69999999999999998999999999988765 58999


Q ss_pred             EEeC
Q psy14174        214 LIPA  217 (269)
Q Consensus       214 v~p~  217 (269)
                      |.+.
T Consensus        92 V~~~   95 (111)
T 1vae_A           92 VVSL   95 (111)
T ss_dssp             EECE
T ss_pred             EEec
Confidence            8764

>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1

Probab=99.26  E-value=7.8e-12  Score=94.99  Aligned_cols=76  Identities=18%  Similarity=0.342  Sum_probs=68.2

Q ss_pred             eCCCCCCeEEeccCCCC-cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        142 KSNEPLGATIKTDEESG-KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       142 k~~~~lG~ti~~~~~~~-~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      ++..+|||++.++.+.. +++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+..+.|+|.+..
T Consensus        12 ~~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g   88 (103)
T 1v5l_A           12 PGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE   88 (103)
T ss_dssp             ESSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCT
T ss_pred             cCCCCcCEEEeccccCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECC
Confidence            46679999999875443 89999999999999999 699999999999999999999999999988899999998854

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A

Probab=99.26  E-value=3.7e-11  Score=100.94  Aligned_cols=71  Identities=23%  Similarity=0.394  Sum_probs=65.0

Q ss_pred             CCCCCeEEeccCC---------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        144 NEPLGATIKTDEE---------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       144 ~~~lG~ti~~~~~---------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      +.+|||+|.|+.+         ..+++|.+|.+||||++ | |++||+|++|||+++.++++.+++.+++..++.+.|+|
T Consensus         1 ~~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v   78 (195)
T 2qbw_A            1 SPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELII   78 (195)
T ss_dssp             CCCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEE
T ss_pred             CCcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence            3589999999742         35999999999999999 8 69999999999999999999999999999999999999


Q ss_pred             Ee
Q psy14174        215 IP  216 (269)
Q Consensus       215 ~p  216 (269)
                      .+
T Consensus        79 ~r   80 (195)
T 2qbw_A           79 VR   80 (195)
T ss_dssp             EE
T ss_pred             EE
Confidence            88

>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A

Probab=99.26  E-value=6.1e-11  Score=85.34  Aligned_cols=76  Identities=25%  Similarity=0.396  Sum_probs=65.5

Q ss_pred             EEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        136 KIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       136 r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      +...+.+ ..+.|||.+.     .+++|..|.++|+|+++|.|++||+|++|||.++.++++.++..+++..++.+.+++
T Consensus         3 ~~~~~~~~~~~~~g~~~~-----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v   77 (81)
T 2rcz_A            3 KVTLVKSRKNEEYGLRLA-----SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVV   77 (81)
T ss_dssp             EEEEECCSTTCCCCEEEE-----EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEE
T ss_pred             EEEEEECCCCCCCCEEEe-----CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEE
Confidence            3344444 5678999887     379999999999999999669999999999999999999999999998878888888


Q ss_pred             Ee
Q psy14174        215 IP  216 (269)
Q Consensus       215 ~p  216 (269)
                      .+
T Consensus        78 ~R   79 (81)
T 2rcz_A           78 QR   79 (81)
T ss_dssp             EC
T ss_pred             Ee
Confidence            76

>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A

Probab=99.26  E-value=3.7e-11  Score=92.74  Aligned_cols=82  Identities=24%  Similarity=0.467  Sum_probs=70.6

Q ss_pred             ceEEEEEee-CCCCCCeEEeccC-CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDE-ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~-~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ..+.|.+.+ +..+|||++.++. ...+++|..|.++++|+++| |++||+|++|||+++.++.+.++..+++.. ..+.
T Consensus        15 ~~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~v~   92 (114)
T 1x5n_A           15 KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RSLT   92 (114)
T ss_dssp             SSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC-SSEE
T ss_pred             CcEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-CeEE
Confidence            347777866 7889999999764 23589999999999999999 799999999999999999988899998765 6889


Q ss_pred             EEEEeC
Q psy14174        212 FKLIPA  217 (269)
Q Consensus       212 l~v~p~  217 (269)
                      ++|.+.
T Consensus        93 l~v~r~   98 (114)
T 1x5n_A           93 ISIVAA   98 (114)
T ss_dssp             EEECSS
T ss_pred             EEEEcC
Confidence            998764

>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A

Probab=99.25  E-value=4.5e-11  Score=99.86  Aligned_cols=85  Identities=25%  Similarity=0.462  Sum_probs=74.2

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      ....+.+.+...+|||++.++..      ..+++|..|.+||+|+++|.|++||+|++|||+++.++++.+++.+++..+
T Consensus       100 ~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~  179 (196)
T 3gsl_A          100 KVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY  179 (196)
T ss_dssp             EEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCC
T ss_pred             ccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCC
Confidence            44567788877799999987632      247999999999999999977999999999999999999999999999999


Q ss_pred             CeEEEEEEeCC
Q psy14174        208 GTITFKLIPAD  218 (269)
Q Consensus       208 ~~v~l~v~p~~  218 (269)
                      ..+.|+|.+..
T Consensus       180 ~~v~l~v~R~~  190 (196)
T 3gsl_A          180 DVVYLKVAKPS  190 (196)
T ss_dssp             EEEEEEEEEES
T ss_pred             CeEEEEEeCCC
Confidence            99999998854

>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}

Probab=99.25  E-value=4.8e-11  Score=90.54  Aligned_cols=78  Identities=23%  Similarity=0.327  Sum_probs=68.9

Q ss_pred             EEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc---CCCeEEE
Q psy14174        136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS---SEGTITF  212 (269)
Q Consensus       136 r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~---~~~~v~l  212 (269)
                      +.+.+.+...++||.+...  ..+.+|..|.+||||+++| |++||+|++|||.++...+++++...++.   .++.+.|
T Consensus        19 ~~l~l~~~~~g~G~~l~~~--~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~L   95 (101)
T 3qik_A           19 KRLLILPQEEDYGFDIEEK--NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRL   95 (101)
T ss_dssp             EEEEECCCSSSSSEEEEEE--TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEE
T ss_pred             CeEEEEeCCCcccEEEEcc--CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEE
Confidence            4566777888999999875  4688999999999999999 69999999999999988899999999986   5899999


Q ss_pred             EEEe
Q psy14174        213 KLIP  216 (269)
Q Consensus       213 ~v~p  216 (269)
                      .|..
T Consensus        96 LV~~   99 (101)
T 3qik_A           96 LVAT   99 (101)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            8864

>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=99.24  E-value=1.2e-11  Score=106.59  Aligned_cols=85  Identities=21%  Similarity=0.346  Sum_probs=75.0

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE-
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI-  210 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v-  210 (269)
                      ....|.|.|.|+..+|||++.++.+..+++|..|.+||+|+++| |+.||+|++|||+.+.++++.++..+++..+..+ 
T Consensus         7 ~~~~r~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~   85 (216)
T 2krg_A            7 MLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK   85 (216)
T ss_dssp             TCCCEEEEEECCSSSSCEEECCCSSSCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEE
T ss_pred             ccceEEEEEEeCCCCceEEEEecCCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEE
Confidence            34578899999888999999988655589999999999999999 7999999999999999999999999998777788 


Q ss_pred             EEEEEeC
Q psy14174        211 TFKLIPA  217 (269)
Q Consensus       211 ~l~v~p~  217 (269)
                      .++|.+.
T Consensus        86 ~l~V~R~   92 (216)
T 2krg_A           86 LLVVDRE   92 (216)
T ss_dssp             EEECCHH
T ss_pred             EEEEEEC
Confidence            7777553

>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}

Probab=99.24  E-value=1e-10  Score=86.48  Aligned_cols=76  Identities=29%  Similarity=0.447  Sum_probs=65.2

Q ss_pred             EEEee--CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEE
Q psy14174        138 VQLVK--SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLI  215 (269)
Q Consensus       138 V~l~k--~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~  215 (269)
                      |.+.+  ....|||.+.     .+++|..|.+||+|+++|.|++||+|++|||.++.++++.++..+++..++.+.|++.
T Consensus         6 v~~~~~~~~~~~g~~~~-----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~   80 (92)
T 3cyy_A            6 VTLVKSAKNEEYGLRLA-----SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQ   80 (92)
T ss_dssp             EEEECSSTTSCCCEEEE-----EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEE
T ss_pred             EEEEeCCCCCCCCEEEe-----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEE
Confidence            44554  4568999876     4799999999999999996699999999999999999999999999988889999998


Q ss_pred             eCC
Q psy14174        216 PAD  218 (269)
Q Consensus       216 p~~  218 (269)
                      +.+
T Consensus        81 r~g   83 (92)
T 3cyy_A           81 RDE   83 (92)
T ss_dssp             C--
T ss_pred             eCC
Confidence            754

>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}

Probab=99.23  E-value=6.3e-11  Score=87.40  Aligned_cols=77  Identities=22%  Similarity=0.304  Sum_probs=65.5

Q ss_pred             EEEee-CCC--CCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEE
Q psy14174        138 VQLVK-SNE--PLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITF  212 (269)
Q Consensus       138 V~l~k-~~~--~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l  212 (269)
                      +.+.+ .+.  .|||++...  ..+++|..|.+||||+++| |++||+|++|||.++.+.++.++..+++.  .+..+.|
T Consensus         7 ~~~~~~~~~~~~lG~~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l   83 (90)
T 2eaq_A            7 ISINQTPGKSLDFGFTIKWD--IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVM   83 (90)
T ss_dssp             EEEECCTTCSSCCSEEEEEE--TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEE
T ss_pred             EEEEecCCCCCcccEEEEec--CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence            45555 333  799999865  4589999999999999999 69999999999999988899999999985  5788999


Q ss_pred             EEEeC
Q psy14174        213 KLIPA  217 (269)
Q Consensus       213 ~v~p~  217 (269)
                      +|.+.
T Consensus        84 ~v~R~   88 (90)
T 2eaq_A           84 DVRRY   88 (90)
T ss_dssp             EEEEE
T ss_pred             EEEeC
Confidence            98764

>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A

Probab=99.22  E-value=9.3e-12  Score=116.09  Aligned_cols=87  Identities=25%  Similarity=0.457  Sum_probs=74.5

Q ss_pred             CCceEEEEEee-CCCCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC-
Q psy14174        132 EETVKIVQLVK-SNEPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-  206 (269)
Q Consensus       132 ~~~~r~V~l~k-~~~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~-  206 (269)
                      .+.+|.|.+.| .+++|||+|.+...   ..+++|.+|.+||||+++|.|++||+|++|||+++.++++.+++.+++.. 
T Consensus       202 ~~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~  281 (388)
T 3suz_A          202 SENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLK  281 (388)
T ss_dssp             SSCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCT
T ss_pred             cccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhcc
Confidence            46678999999 68999999988532   12589999999999999997799999999999999999999999999885 


Q ss_pred             -CCeEEEEEEeCC
Q psy14174        207 -EGTITFKLIPAD  218 (269)
Q Consensus       207 -~~~v~l~v~p~~  218 (269)
                       +..++|++.+..
T Consensus       282 ~~~~v~l~v~r~~  294 (388)
T 3suz_A          282 NQTQVKLNIVSCP  294 (388)
T ss_dssp             TCSCEEEEEEECC
T ss_pred             CCCcccccccccc
Confidence             355999998854

>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}

Probab=99.22  E-value=6e-11  Score=100.34  Aligned_cols=80  Identities=18%  Similarity=0.328  Sum_probs=70.8

Q ss_pred             EEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        136 KIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       136 r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      ..+.+.+ ...+|||++...  ..+++|..|.+||+|+++|.|++||+|++|||+++.++++.++..+++..++.+.|+|
T Consensus       115 ~~v~l~~~~~~~lG~~~~~~--~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V  192 (206)
T 3r0h_A          115 FNVDLMKKAGKELGLSLSPN--EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEV  192 (206)
T ss_dssp             EEEEEECCTTCCCCEEEEEC--SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEE
T ss_pred             EEEEEecCCCCccCeEEEcC--CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence            4456666 567899999865  3589999999999999999669999999999999999999999999999999999999


Q ss_pred             EeC
Q psy14174        215 IPA  217 (269)
Q Consensus       215 ~p~  217 (269)
                      .+.
T Consensus       193 ~R~  195 (206)
T 3r0h_A          193 TRP  195 (206)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            874

>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A

Probab=99.22  E-value=8.2e-11  Score=99.20  Aligned_cols=85  Identities=21%  Similarity=0.324  Sum_probs=74.2

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCC-----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC-
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEE-----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-  206 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~-----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~-  206 (269)
                      ..+.|.|.| ...+|||++.++.+     ..+++|..|.+||||+++|.|++||+|++|||.++.++++.++..+++.. 
T Consensus         6 ~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~   85 (196)
T 1p1d_A            6 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS   85 (196)
T ss_dssp             EEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCC
T ss_pred             EEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence            356688989 56999999999732     34799999999999999996699999999999999998999999999887 


Q ss_pred             -CCeEEEEEEeCC
Q psy14174        207 -EGTITFKLIPAD  218 (269)
Q Consensus       207 -~~~v~l~v~p~~  218 (269)
                       +..+.|++.+..
T Consensus        86 ~g~~v~l~v~R~~   98 (196)
T 1p1d_A           86 ITSKVTLEIEFDV   98 (196)
T ss_dssp             SSSEEEEEEEECS
T ss_pred             CCCeEEEEEEecC
Confidence             788999998765

>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.17  E-value=3e-10  Score=89.45  Aligned_cols=83  Identities=29%  Similarity=0.402  Sum_probs=70.3

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ..+.+.+.. ...+|||++.++... .+++|..|.+||||+++| |++||+|++|||.++.+.++.+++..++. +..+.
T Consensus        20 ~~~~v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~v~   97 (128)
T 1uf1_A           20 DEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKS-SRHLI   97 (128)
T ss_dssp             SEEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTT-CSEEE
T ss_pred             cEEEEEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhc-CCeEE
Confidence            456677776 457899999886432 389999999999999999 69999999999999999998888888866 46899


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      |+|.+..
T Consensus        98 l~v~R~g  104 (128)
T 1uf1_A           98 LTVKDVG  104 (128)
T ss_dssp             EEEECCS
T ss_pred             EEEEECC
Confidence            9998865

>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=99.13  E-value=1.8e-10  Score=90.36  Aligned_cols=86  Identities=23%  Similarity=0.402  Sum_probs=70.0

Q ss_pred             CCCceEEEEEeeCC--CCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        131 EEETVKIVQLVKSN--EPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       131 ~~~~~r~V~l~k~~--~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      .+..++.+.+.|.+  .+|||++.....   ..+++|..|.++|||+++|.|++||+|++|||+++.  ++.++..+|+.
T Consensus        16 ~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~   93 (124)
T 1wh1_A           16 EELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTS   93 (124)
T ss_dssp             SSCEECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTC
T ss_pred             CcceEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHh
Confidence            34455666777733  489999987642   258999999999999999956999999999999996  58899999987


Q ss_pred             C-CCeEEEEEEeCC
Q psy14174        206 S-EGTITFKLIPAD  218 (269)
Q Consensus       206 ~-~~~v~l~v~p~~  218 (269)
                      . +..+.|+|.+..
T Consensus        94 ~~g~~v~l~v~R~g  107 (124)
T 1wh1_A           94 EENKNFSLLIARPE  107 (124)
T ss_dssp             SSCCSCCEEEEECS
T ss_pred             CCCCEEEEEEEECC
Confidence            5 678999998864

>1rso_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity; NMR {Rattus norvegicus} SCOP: a.194.1.1

Probab=99.11  E-value=8.1e-11  Score=79.85  Aligned_cols=52  Identities=25%  Similarity=0.422  Sum_probs=48.1

Q ss_pred             CCcchhHHHHHHHHHHhhcccccChhhHHHHHHHhcChhHHHHHhhhhcccc
Q psy14174          7 EEFDISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVN   58 (269)
Q Consensus         7 ~~~~~~~~~vL~~L~~~~~~~~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~   58 (269)
                      +...+||++||++|.+++.+++++++|+.||+++|+||+|++|+|+|++|+.
T Consensus         3 ~~~~~~v~~vL~sL~~i~~l~~~~~~d~~fL~~ll~~~~L~~Llkvhdki~~   54 (56)
T 1rso_B            3 LAAERAVSQVLDSLEEIHALTDSSEKDLDFLHSVFQDQHLHTLLDLYDKINT   54 (56)
T ss_dssp             STTTHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred             hhhhhHHHHHHHHHHHHHhcccccccCHHHHHHHHcCHHHHHHHHHHHHHHc
Confidence            3456799999999999999998889999999999999999999999999975

>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B

Probab=99.11  E-value=2.3e-11  Score=80.73  Aligned_cols=49  Identities=39%  Similarity=0.513  Sum_probs=45.7

Q ss_pred             hHHhHHHHHHHHhhccCCChhHHHHHHhccCchhhhhhhhcccccccccC
Q psy14174         68 AMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYY  117 (269)
Q Consensus        68 ~~~~~~~v~~~l~~~~~~~~~~~el~~ll~~p~~~~ll~a~d~v~~~~~~  117 (269)
                      |.+++++|++.++..+. +++++||.+||++||||+||.+||.|+++.|+
T Consensus         1 A~~l~~ev~~~L~~~~~-~~~~~EL~~lL~~PHfqaLl~ahD~Va~~~y~   49 (50)
T 1y74_B            1 AVQRAKEVLEEISCYPE-NNDAKELKRILTQPHFMALLQTHDVVAHEVYS   49 (50)
T ss_dssp             CHHHHHHHHHHHHTCSS-CHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred             ChHHHHHHHHHHhcCCC-ChHHHHHHHHHcCHHHHHHHHHHHHHHHHHhc
Confidence            45889999999999877 89999999999999999999999999999885

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A

Probab=99.10  E-value=3.7e-11  Score=109.31  Aligned_cols=47  Identities=26%  Similarity=0.497  Sum_probs=44.6

Q ss_pred             ccccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        223 YRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       223 ~~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .++..+||||+|||++..|..+||+++||+|++||||||++++|++|
T Consensus        34 ~k~~~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d~~W   80 (337)
T 4dey_A           34 TKPVAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDW   80 (337)
T ss_dssp             SSCCCEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSE
T ss_pred             CCCccEEEEEccccCCCCCCCCCcccccccccCCCEEEEEecCCCCe
Confidence            35667999999999999999999999999999999999999999999

>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}

Probab=99.08  E-value=9.3e-10  Score=92.81  Aligned_cols=82  Identities=30%  Similarity=0.445  Sum_probs=71.3

Q ss_pred             EEEEEeeCCCCCCeEEeccCC-----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        136 KIVQLVKSNEPLGATIKTDEE-----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       136 r~V~l~k~~~~lG~ti~~~~~-----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ..+.+.+...+|||++.++..     ..+++|..|.++|+|+++|.|++||+|++|||.++.+++++++..+++..+..+
T Consensus       108 ~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v  187 (200)
T 2qt5_A          108 VEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEA  187 (200)
T ss_dssp             EEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEE
T ss_pred             EEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence            345566777889999987632     248999999999999999966999999999999999999999999999988899


Q ss_pred             EEEEEeC
Q psy14174        211 TFKLIPA  217 (269)
Q Consensus       211 ~l~v~p~  217 (269)
                      .|+|.+.
T Consensus       188 ~l~v~R~  194 (200)
T 2qt5_A          188 TLLIEYD  194 (200)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEC
Confidence            9999874

>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.07  E-value=8.8e-10  Score=86.01  Aligned_cols=85  Identities=18%  Similarity=0.284  Sum_probs=68.7

Q ss_pred             CceEEEEEee-CCCCCCeEEeccC----CCCcEEEEEecC--CChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDE----ESGKIVVARVMH--GGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~----~~~~i~V~~V~~--gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      ..++.+.+.+ ..+.+||++....    ...+++|..|.+  ++||+++| |++||+|++|||.++.++++.++..+++.
T Consensus        14 ~~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~   92 (118)
T 2yub_A           14 YSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQ   92 (118)
T ss_dssp             CEEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHC
T ss_pred             ceeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHh
Confidence            3455555555 3456788776432    235899999999  99999999 69999999999999999988999999988


Q ss_pred             CCCeEEEEEEeCC
Q psy14174        206 SEGTITFKLIPAD  218 (269)
Q Consensus       206 ~~~~v~l~v~p~~  218 (269)
                      .+..+.|+|.+..
T Consensus        93 ~g~~v~l~v~R~g  105 (118)
T 2yub_A           93 TSQTLQLLIEHDP  105 (118)
T ss_dssp             CSSCEEEEEEECS
T ss_pred             CCCEEEEEEEECC
Confidence            7778999998865

>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A

Probab=98.96  E-value=4.3e-09  Score=88.58  Aligned_cols=82  Identities=26%  Similarity=0.456  Sum_probs=70.5

Q ss_pred             EEEEEee-CCCCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        136 KIVQLVK-SNEPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       136 r~V~l~k-~~~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      +.+.+.+ ....|||++.....   ..+++|..|.+||+|+++|.|++||+|++|||.++.++++.++..++++.+..+.
T Consensus       109 ~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~  188 (196)
T 1p1d_A          109 FHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVK  188 (196)
T ss_dssp             EEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEE
T ss_pred             EEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEE
Confidence            4566665 56789999987532   2589999999999999999669999999999999999999999999998889999


Q ss_pred             EEEEeC
Q psy14174        212 FKLIPA  217 (269)
Q Consensus       212 l~v~p~  217 (269)
                      |+|.+.
T Consensus       189 l~v~R~  194 (196)
T 1p1d_A          189 LKIRKD  194 (196)
T ss_dssp             EEEECC
T ss_pred             EEEEeC
Confidence            999874

>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A

Probab=98.57  E-value=4.7e-07  Score=74.01  Aligned_cols=75  Identities=27%  Similarity=0.523  Sum_probs=64.7

Q ss_pred             EEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        136 KIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       136 r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      +.+.+.+ ....|||++..     + +|..|.++|+|+++| |+.||+|++|||.++.++.+..+...++..+..+.+.+
T Consensus        90 ~~v~l~~~~~~~lG~~~~~-----g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v  162 (166)
T 1w9e_A           90 RTITMHKDSTGHVGFIFKN-----G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITI  162 (166)
T ss_dssp             EEEEEECCTTSCCSEEEET-----T-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEE
T ss_pred             EEEEEecCCCCcEeEEEeC-----C-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEE
Confidence            5566665 55679999872     3 899999999999999 69999999999999999999999888888999999988


Q ss_pred             EeC
Q psy14174        215 IPA  217 (269)
Q Consensus       215 ~p~  217 (269)
                      .|.
T Consensus       163 ~~~  165 (166)
T 1w9e_A          163 MPA  165 (166)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            873

>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A

Probab=98.54  E-value=8.2e-09  Score=96.12  Aligned_cols=68  Identities=31%  Similarity=0.619  Sum_probs=0.0

Q ss_pred             CCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        144 NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       144 ~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      ..+|||++.++      +|..|.+||+|+++| |++||+|++|||+++.+.++++++.++++.++.++|+|.|..
T Consensus       307 ~~~lG~~i~~g------~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p~~  374 (388)
T 3suz_A          307 KYQLGFSVQNG------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAA  374 (388)
T ss_dssp             ---------------------------------------------------------------------------
T ss_pred             CCccceEEecC------EEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEecc
Confidence            44677776643      799999999999999 799999999999999999999999999999999999998864

>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}

Probab=98.53  E-value=7.3e-07  Score=70.68  Aligned_cols=57  Identities=16%  Similarity=0.197  Sum_probs=49.5

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .+++|..|.+||||+ +| |+.||+|++|||.++.+  ..++...+..  .+..+.+++.+.+
T Consensus        57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g  115 (134)
T 2l97_A           57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIAS--STDLQSALYNHSIGDTIKITYYRNG  115 (134)
T ss_dssp             SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCC--HHHHHHHHHHSSTTCEEEEEEEETT
T ss_pred             CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCC--HHHHHHHHHhCCCCCEEEEEEEECC
Confidence            589999999999999 99 69999999999999964  5678877765  4789999998864

>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A

Probab=98.51  E-value=7.1e-07  Score=67.00  Aligned_cols=58  Identities=19%  Similarity=0.310  Sum_probs=49.8

Q ss_pred             CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        157 SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       157 ~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      ..|++|..|.++|||++ | |++||+|++|||.++.  +..++...+..  .+..+.+++.+.+
T Consensus         6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g   65 (100)
T 3i18_A            6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFK--SSQEFIDYIHSKKVGDTVKINYKHGD   65 (100)
T ss_dssp             CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCS--SHHHHHHHHHTSCTTCEEEEEEEETT
T ss_pred             CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECC
Confidence            35899999999999996 8 6999999999999995  45788888876  4688999998864

>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4

Probab=98.50  E-value=5.2e-07  Score=69.03  Aligned_cols=58  Identities=17%  Similarity=0.406  Sum_probs=51.2

Q ss_pred             CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        157 SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       157 ~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      ..+++|..|.++|||+++| |++||.|++|||.++.  +..++...++. +..+.+++.+.+
T Consensus        34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g   91 (113)
T 2pzd_A           34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGR   91 (113)
T ss_dssp             SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-CSSEEEEEEETT
T ss_pred             CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECC
Confidence            3589999999999999999 6999999999999996  56788888876 688999998854

>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A

Probab=98.49  E-value=5.1e-07  Score=83.83  Aligned_cols=73  Identities=27%  Similarity=0.451  Sum_probs=62.7

Q ss_pred             CCCCeEEecc-CCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc-CCCeEEEEEEeCC
Q psy14174        145 EPLGATIKTD-EESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS-SEGTITFKLIPAD  218 (269)
Q Consensus       145 ~~lG~ti~~~-~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~l~v~p~~  218 (269)
                      .++|+.+... ...++++|..|.+||||+++| |++||+|++|||+++.+++..++..+++. .+..++|+|.+.+
T Consensus        85 ~giG~~~~~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g  159 (388)
T 1fc6_A           85 TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPG  159 (388)
T ss_dssp             BBCSEEEEECTTCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETT
T ss_pred             EEEEEEEEEeecCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCC
Confidence            4789988754 324689999999999999999 69999999999999999988999999975 4677899998864

>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}

Probab=98.48  E-value=1.5e-07  Score=69.73  Aligned_cols=56  Identities=21%  Similarity=0.377  Sum_probs=49.0

Q ss_pred             cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCeEEEEEEeCC
Q psy14174        159 KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGTITFKLIPAD  218 (269)
Q Consensus       159 ~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~v~l~v~p~~  218 (269)
                      |++|..|.++|||++ | |++||+|++|||.++.  +..++..+++..  +..+.|++.+.+
T Consensus         2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g   59 (91)
T 2kjp_A            2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQ--SAEKLIDYISSKKAGDKVTLKIEREE   59 (91)
T ss_dssp             CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCS--SHHHHHHHHSSCCSSCEECEEEESSS
T ss_pred             ceEEEEECCCChHHH-c-CCCCCEEEEECCEECC--CHHHHHHHHHcCCCCCEEEEEEEECC
Confidence            678899999999999 9 7999999999999996  457889999764  788999999864

>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}

Probab=98.47  E-value=3.5e-07  Score=68.06  Aligned_cols=57  Identities=12%  Similarity=0.302  Sum_probs=50.0

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .+++|.+|.++|||++ | |++||+|++|||.++.+  ..++..+++.  .+..+.|++.+.+
T Consensus         5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g   63 (94)
T 2kl1_A            5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFIRDR   63 (94)
T ss_dssp             CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEEETT
T ss_pred             CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECC
Confidence            5899999999999999 8 79999999999999964  5788888876  4789999999864

>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A

Probab=98.44  E-value=1e-06  Score=74.89  Aligned_cols=60  Identities=15%  Similarity=0.178  Sum_probs=48.4

Q ss_pred             CCcEEEEEecCCChhhhcCCCCCC-CeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeC
Q psy14174        157 SGKIVVARVMHGGAADRSGLIHVG-DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPA  217 (269)
Q Consensus       157 ~~~i~V~~V~~gg~A~r~GlL~~G-D~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~  217 (269)
                      ..|++|..|.++|||+++| |+.| |+|++|||+++.........-+-...+..+.+++.+.
T Consensus        15 ~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~   75 (209)
T 3rle_A           15 TEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSS   75 (209)
T ss_dssp             SEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEET
T ss_pred             CCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEec
Confidence            3589999999999999999 6999 9999999999987664333222234678899999875

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=3.5e-07  Score=65.27  Aligned_cols=45  Identities=24%  Similarity=0.302  Sum_probs=40.2

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEe-CCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVS-QDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~-~~d~~W  269 (269)
                      ....++||+|||++..++..||.+..|+|++|||++|+. .++..|
T Consensus         5 ~~~~~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gW   50 (75)
T 2ege_A            5 SSGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGF   50 (75)
T ss_dssp             CCSEEEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEESCCCTTCE
T ss_pred             CCCcEEEECCCCCCCccccCCCCCCcceECCCCEEEEeEccCCCCE
Confidence            345689999999999999999999999999999999997 577777

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=4e-07  Score=65.07  Aligned_cols=45  Identities=31%  Similarity=0.398  Sum_probs=40.4

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCC-CC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDA-YW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~-~W  269 (269)
                      ....++||+|+|++..|..+||.+..|+|++||||+|+.+.|+ .|
T Consensus         5 ~~~~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gW   50 (76)
T 2csi_A            5 SSGRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGF   50 (76)
T ss_dssp             CCSEEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESSCCSSSE
T ss_pred             CCccEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEecCCCCe
Confidence            3456799999999999999999999999999999999999775 47

>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A

Probab=98.34  E-value=1.3e-06  Score=65.04  Aligned_cols=55  Identities=24%  Similarity=0.265  Sum_probs=46.9

Q ss_pred             EEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC-C-CeEEEEEEeCC
Q psy14174        161 VVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-E-GTITFKLIPAD  218 (269)
Q Consensus       161 ~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~-~-~~v~l~v~p~~  218 (269)
                      +|..|.++|||+++| |+.||+|++|||+.+.  +..++...+... + ..+.++|.+.+
T Consensus         5 ~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~d~~~~l~~~~~~~~v~l~v~R~g   61 (95)
T 3id1_A            5 VVGEIAANSIAAEAQ-IAPGTELKAVDGIETP--DWDAVRLQLVDKIGDESTTITVAPFG   61 (95)
T ss_dssp             BEEEECTTSHHHHTT-CCTTCEEEEETTEECS--SHHHHHHHHHHTTTCSEEEEEEECTT
T ss_pred             EEEeeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHHhcCCCcEEEEEEECC
Confidence            588999999999999 6999999999999995  567888878654 3 68999999864

>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A

Probab=98.34  E-value=3.1e-06  Score=76.44  Aligned_cols=70  Identities=20%  Similarity=0.389  Sum_probs=55.9

Q ss_pred             CCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEe-CC
Q psy14174        146 PLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIP-AD  218 (269)
Q Consensus       146 ~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p-~~  218 (269)
                      .||+++.......+++|..|.+|+||+++| |+.||+|++|||+++.  +..++...+..  .+..++|+|.+ .+
T Consensus       230 ~lGi~~~~~~~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~~g  302 (324)
T 1y8t_A          230 SLGVQVTNDKDTLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPIN--SADALVAAVRSKAPGATVALTFQDPSG  302 (324)
T ss_dssp             ECCEEEESCSSSSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEECSSC
T ss_pred             ccceEeeeccCCCceEEEEECCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCC
Confidence            356655543234589999999999999999 6999999999999996  45678888864  57889999988 54

>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}

Probab=98.33  E-value=1.6e-06  Score=66.22  Aligned_cols=57  Identities=21%  Similarity=0.373  Sum_probs=49.6

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      .+++|..|.++|||+++| |++||+|++|||.++.  +..++...++ .+..+.+++.+..
T Consensus        35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~-~g~~v~l~v~R~g   91 (112)
T 2p3w_A           35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLV--DSSELQEAVL-TESPLLLEVRRGN   91 (112)
T ss_dssp             SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHH-HCSSEEEEEEETT
T ss_pred             CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHh-CCCeEEEEEEECC
Confidence            589999999999999999 6999999999999996  4678887774 5778999998854

>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5

Probab=98.33  E-value=1.6e-06  Score=63.28  Aligned_cols=57  Identities=16%  Similarity=0.226  Sum_probs=47.7

Q ss_pred             cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        159 KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       159 ~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      |+.|..+.++|+|+++| |++||+|++|||.++.  +..++..+++.  .+..+.+++.+.+
T Consensus        20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g   78 (87)
T 2i6v_A           20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDG   78 (87)
T ss_dssp             EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETT--CHHHHHHHHHTGGGCSEEEEEEEETT
T ss_pred             EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence            67788888888999999 6999999999999995  55677777765  4678999998854

>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A

Probab=98.29  E-value=1.2e-06  Score=64.29  Aligned_cols=57  Identities=16%  Similarity=0.318  Sum_probs=48.0

Q ss_pred             cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc-CCCeEEEEEEeCC
Q psy14174        159 KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS-SEGTITFKLIPAD  218 (269)
Q Consensus       159 ~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~l~v~p~~  218 (269)
                      +++|..|.++|||+++| |+.||+|++|||.++.  +..++...++. .+..+.+++.+.+
T Consensus         5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g   62 (91)
T 2zpm_A            5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLT--QWVTFVMLVRDNPGXSLALEIERQG   62 (91)
T ss_dssp             -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECC--CHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred             CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcC--CHHHHHHHHhcCCCCeEEEEEEECC
Confidence            45688999999999999 6999999999999996  56788888865 4678999998854

>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A

Probab=98.27  E-value=4e-06  Score=79.04  Aligned_cols=58  Identities=21%  Similarity=0.397  Sum_probs=52.9

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      .+++|..|.+||||+++| |++||+|++|||+++.  +.+++..+++..++.+.|+|.+..
T Consensus       363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g  420 (436)
T 4a8c_A          363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVN--SIAEMRKVLAAKPAIIALQIVRGN  420 (436)
T ss_pred             CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCeEEEEEEECC
Confidence            489999999999999999 6999999999999995  578999999988889999999865

>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}

Probab=98.25  E-value=2.6e-06  Score=83.40  Aligned_cols=68  Identities=24%  Similarity=0.391  Sum_probs=57.2

Q ss_pred             CCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        145 EPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       145 ~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      ..+|+++...  .++++|..|.+||||+++| |++||+|++|||..+.   ..++..+++.  .+..|.++|.+.+
T Consensus       485 ~~lG~~~~~~--~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~---~~~l~~~l~~~~~g~~v~l~v~R~g  554 (597)
T 4fgm_A          485 VNFGAKYKAS--PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQAT---EQSVKRILERYIPGDTVTIHAFRRD  554 (597)
T ss_dssp             CCCSEEEEEE--TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC---TTTHHHHHTTCCTTCEEEEEEEETT
T ss_pred             cccceEEecc--CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECC---HHHHHHHHHhcCCCCEEEEEEEECC
Confidence            4789998765  4589999999999999999 6999999999999994   3466667754  5789999999865

>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A

Probab=98.23  E-value=5.7e-06  Score=77.98  Aligned_cols=58  Identities=16%  Similarity=0.364  Sum_probs=49.4

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|..|.++|||+++| |+.||+|++|||+++.+.  .++...+..  .+..+.++|.+..
T Consensus       263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g  322 (436)
T 4a8c_A          263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNG  322 (436)
T ss_pred             cceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECC
Confidence            589999999999999999 699999999999999654  566666654  5788999998864

>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A

Probab=98.20  E-value=8.3e-06  Score=73.52  Aligned_cols=58  Identities=22%  Similarity=0.305  Sum_probs=51.1

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .+++|..|.++|||+++| |++||+|++|||+++.+  ..++..+++.  .+..+.|++.+.+
T Consensus       244 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g  303 (318)
T 1te0_A          244 QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPVVVMRDD  303 (318)
T ss_dssp             CCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEEEEESSS
T ss_pred             CcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECC
Confidence            489999999999999999 69999999999999954  5788888875  5789999999864

>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=98.19  E-value=1.4e-06  Score=81.50  Aligned_cols=71  Identities=17%  Similarity=0.239  Sum_probs=56.8

Q ss_pred             CCCCCeEEeccCCC-C--cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        144 NEPLGATIKTDEES-G--KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       144 ~~~lG~ti~~~~~~-~--~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      ..|+||++...... .  .++|..|.+||||+++| |+.||+|++|||.++.++.   +..+++..+..++|++.+..
T Consensus        73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g  146 (403)
T 3k50_A           73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEV  146 (403)
T ss_dssp             BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEE
T ss_pred             ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCC
Confidence            56777777654321 2  47899999999999999 6999999999999998875   56677777778899998754

>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5

Probab=98.18  E-value=5.7e-06  Score=62.55  Aligned_cols=57  Identities=14%  Similarity=0.179  Sum_probs=46.1

Q ss_pred             cEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        159 KIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       159 ~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      ++.|..+.++++|+++| |++||+|++|||.++.++  .++..++..  .+..+.|++.+.+
T Consensus        38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g   96 (105)
T 2i4s_A           38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDG   96 (105)
T ss_dssp             EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTST--THHHHHHHHHTTCSEEEEEEEETT
T ss_pred             EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCeEEEEEEECC
Confidence            56677778888889999 699999999999999755  466666653  5778999998854

>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}

Probab=98.13  E-value=7.2e-06  Score=75.01  Aligned_cols=58  Identities=16%  Similarity=0.367  Sum_probs=51.7

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|..|.+||||+++| |++||+|++|||+++.  +..++..+++.  .+..+.++|.+.+
T Consensus       263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g  322 (345)
T 3stj_A          263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNG  322 (345)
T ss_dssp             SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETT
T ss_pred             ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence            488999999999999999 6999999999999995  56788888875  5789999999965

>1vf6_C Maguk P55 subfamily member 5; L27 domain, heterodimer, four-helical bundle, coiled-coil, hydrophobic packing interactions; 2.10A {Mus musculus} SCOP: a.194.1.1

Probab=98.10  E-value=2.1e-06  Score=58.72  Aligned_cols=52  Identities=25%  Similarity=0.450  Sum_probs=45.1

Q ss_pred             CcchhHHHHHHHHHHhhccc--ccChhhHHHHHHHhcChhHHHHHhhhhccccc
Q psy14174          8 EFDISVSSLLETLQESQSTF--SANDEELLFLSSLLQSKELNALVHVHNSIVNE   59 (269)
Q Consensus         8 ~~~~~~~~vL~~L~~~~~~~--~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~~   59 (269)
                      ..++.+.+++.+|+.++...  .++++|+.||.+++++++|++++++|+.+...
T Consensus        11 ~~~~elEel~sSLK~iq~~L~DsQSQeDi~lllqL~~~~DFQ~A~kIhNaVs~~   64 (72)
T 1vf6_C           11 SQDPDVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNRDFQNAFKIHNAVTVH   64 (72)
T ss_dssp             -CCHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHCHHHHHHHHHHHHHC--
T ss_pred             cCCcCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            35678999999999998887  55689999999999999999999999999876

>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6

Probab=98.07  E-value=1.3e-05  Score=62.86  Aligned_cols=56  Identities=14%  Similarity=0.220  Sum_probs=47.9

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .+++|..|.+++||+++  |++||+|++|||.++.  +..++...++.  .+..+.+++ +.+
T Consensus        25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~--~~~dl~~~l~~~~~g~~v~l~V-R~g   82 (125)
T 2hga_A           25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTS--NLTTYSAALKTISVGEVINITT-DQG   82 (125)
T ss_dssp             CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECS--SHHHHHHHHTTCCTTCEEEEEE-TTE
T ss_pred             CceEEEEECCCChHHHh--cCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEE-ECC
Confidence            58999999999999998  6999999999999995  45788888874  477889999 743

>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A

Probab=98.06  E-value=1.5e-05  Score=67.64  Aligned_cols=70  Identities=14%  Similarity=0.263  Sum_probs=56.1

Q ss_pred             CCCCeEEecc----CCCCcEEEEEecCCChhhhcCCCCC-CCeEEEECCEecCCCChHHHHHHHHcC-CCeEEEEEEeCC
Q psy14174        145 EPLGATIKTD----EESGKIVVARVMHGGAADRSGLIHV-GDEVCEVNGINVEGKTPGDVLKILQSS-EGTITFKLIPAD  218 (269)
Q Consensus       145 ~~lG~ti~~~----~~~~~i~V~~V~~gg~A~r~GlL~~-GD~Il~VNG~~v~~~~~~~~~~~l~~~-~~~v~l~v~p~~  218 (269)
                      ..+|+++..-    ....+++|..|.++|||+++| |++ ||.|++|||. +  .+.+++..+++.. +..+.|+|.+..
T Consensus        95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v--~~~~~l~~~l~~~~g~~v~l~v~r~~  170 (209)
T 3rle_A           95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-M--NESEDLFSLIETHEAKPLKLYVYNTD  170 (209)
T ss_dssp             SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-C--CSSSCHHHHHHHTTTSCEEEEEEETT
T ss_pred             CccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-e--CCHHHHHHHHHhCCCCeEEEEEEECC
Confidence            4689998742    112589999999999999999 599 9999999997 6  4556788888764 778999998753

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=98.05  E-value=2.6e-06  Score=58.25  Aligned_cols=36  Identities=22%  Similarity=0.600  Sum_probs=30.6

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .++||+|||++..+.      -.|+|++|||+.|+++.|++|
T Consensus         4 ~~~rAlydy~~~~~~------e~Ls~~~Gd~i~v~~~~~~~W   39 (60)
T 2lx7_A            4 ARCRTLYPFSGERHG------QGLRFAAGELITLLQVPDGGW   39 (60)
T ss_dssp             CEEEESCCCCSCCCS------SCCCCCTTCEEEBSCCCTTSC
T ss_pred             CEEEECcccCCCCCC------CCccCCCCCEEEEeEecCCCe
Confidence            368999999997621      149999999999999999999

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1

Probab=98.02  E-value=1.6e-05  Score=72.03  Aligned_cols=57  Identities=18%  Similarity=0.412  Sum_probs=50.8

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      .+++|..|.+||||+++| |++||+|++|||+++.  +..++...++. +..+.|++.+.+
T Consensus       256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~--~~~~l~~~l~~-~~~v~l~v~R~g  312 (325)
T 1lcy_A          256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGR  312 (325)
T ss_dssp             SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHTT-CSSEEEEEEETT
T ss_pred             CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHhC-CCeEEEEEEECC
Confidence            589999999999999999 6999999999999995  56788888875 688999999865

>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A

Probab=98.00  E-value=1.4e-05  Score=75.65  Aligned_cols=58  Identities=16%  Similarity=0.274  Sum_probs=50.6

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|..|.++|||+++| |+.||+|++|||+++.+  ..++...+..  .+..+.++|.+..
T Consensus       282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~--~~~l~~~l~~~~~g~~v~l~V~R~g  341 (451)
T 3pv2_A          282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQ--ATQVKTTISLLRVGSTVKIIVERDN  341 (451)
T ss_dssp             CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHTSCTTCEEEEEEEETT
T ss_pred             ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECC
Confidence            589999999999999999 69999999999999964  5677777764  5789999999865

>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A

Probab=97.99  E-value=1.1e-05  Score=76.31  Aligned_cols=58  Identities=19%  Similarity=0.206  Sum_probs=52.5

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      .|++|..|.+||+|+++| |++||+|++|||+++.  +.+++..+++..+..+.|+|.+.+
T Consensus       386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g  443 (451)
T 3pv2_A          386 IGVQVVGASENSAGWRAG-IRPGDIIISANKKPVT--DVKSLQTIAQEKKKELLVQVLRGP  443 (451)
T ss_dssp             EEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHTTSSCSCEEEEEEETT
T ss_pred             CceEEEEECCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhcCCCeEEEEEEECC
Confidence            488999999999999999 6999999999999995  568999999988889999998854

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=97.97  E-value=4.8e-06  Score=63.33  Aligned_cols=55  Identities=22%  Similarity=0.523  Sum_probs=43.2

Q ss_pred             CeEEEEEEeCCCcCcccccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        208 GTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       208 ~~v~l~v~p~~~~~~~~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++++.|............+++|+|||.+..       +..|+|++||+|.|++++|..|
T Consensus         8 ~~~~~~~~P~~~~~~~~~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   62 (109)
T 2yt6_A            8 ASSSFSVVSSSYPTGLTGGVTIFVALYDYEART-------TEDLSFKKGERFQIINNTEGDW   62 (109)
T ss_dssp             CCCCCCCCCCCCCSSCCSSCCEEEESSCCCCSS-------TTSCCCCTTCEEEEEECSCTTC
T ss_pred             CCceeeeCCCCCCCCCCCCCEEEEECccCCCCC-------CCccCCCCCCEEEEEEccCCCc
Confidence            445667777654444445667899999999876       4579999999999999988888

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=97.95  E-value=6.7e-06  Score=57.08  Aligned_cols=38  Identities=26%  Similarity=0.518  Sum_probs=32.8

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+.+||+|||.+..       +..|+|++|||+.|+++.|+.|
T Consensus         4 ~~~~~~~Alydy~a~~-------~~ELs~~~Gd~i~v~~~~~~gW   41 (65)
T 2lj0_A            4 QDLFSYQALYSYIPQN-------DDELELRDGDIVDVMEKCDDGW   41 (65)
T ss_dssp             SSSCEEEESSCBCCSS-------TTBCCBCTTCEEEEEEECTTSE
T ss_pred             CcCEEEEEceeECCCC-------cCCcCCCCCCEEEEeEeCCCCE
Confidence            3456789999999987       4579999999999999999888

>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}

Probab=97.94  E-value=2.4e-05  Score=71.39  Aligned_cols=58  Identities=26%  Similarity=0.497  Sum_probs=50.5

Q ss_pred             CcEEEEEecCCChhhhcCCCCC-----------CCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHV-----------GDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~-----------GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|..|.++|||+++| |+.           ||+|++|||+++.+  ..++...+..  .+..++++|.+.+
T Consensus       251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~R~g  321 (348)
T 3qo6_A          251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSN--GSDLYRILDQCKVGDEVTVEVLRGD  321 (348)
T ss_dssp             SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSS--SHHHHHHHTTCCTTCEEEEEEECSS
T ss_pred             ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCC--HHHHHHHHHhCCCcCEEEEEEEECC
Confidence            489999999999999999 588           99999999999965  4688888854  4789999999865

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=97.86  E-value=1.2e-05  Score=55.91  Aligned_cols=37  Identities=32%  Similarity=0.579  Sum_probs=32.3

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||.+..       +..|+|++||++.|+++.|.+|
T Consensus         6 ~~~~~~Alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W   42 (68)
T 1tg0_A            6 VPFKVVAQFPYKSDY-------EDDLNFEKDQEIIVTSVEDAEW   42 (68)
T ss_dssp             SSEEEEESSCBCCSC-------TTBCCBCTTCEEEEEEECSSSE
T ss_pred             CCEEEEECeeECcCC-------cCCCCCCCCCEEEEEEecCCCe
Confidence            446899999999876       5579999999999999988888

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=97.85  E-value=1.3e-05  Score=54.66  Aligned_cols=37  Identities=32%  Similarity=0.585  Sum_probs=32.5

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||++..       +..|+|++|||+.|+.+.|.+|
T Consensus        20 ~~~~~~alydy~a~~-------~~eLsf~~Gd~i~v~~~~~~~W   56 (62)
T 1g2b_A           20 GKELVLALYDYQEKS-------PREVTMKKGDILTLLNSTNKDW   56 (62)
T ss_dssp             SSCEEEECSCBCCSS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CceEEEEeeeECCCC-------CCccCCCCCCEEEEEEecCCCE
Confidence            456899999999876       4579999999999999998888

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=97.85  E-value=1.3e-05  Score=55.43  Aligned_cols=36  Identities=36%  Similarity=0.744  Sum_probs=31.7

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|++||.+..       +..|+|++||++.|++++|++|
T Consensus         3 ~~~~~Alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W   38 (65)
T 1b07_A            3 AEYVRALFDFNGND-------EEDLPFKKGDILRIRDKPEEQW   38 (65)
T ss_dssp             CCEEEESSCBCCSS-------TTBCCBCTTCEEEEEECSSSSE
T ss_pred             ceEEEECCcCCCCC-------CCccCCcCCCEEEEEEecCCCe
Confidence            35789999999887       4579999999999999988888

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=97.84  E-value=1.3e-05  Score=57.07  Aligned_cols=39  Identities=28%  Similarity=0.606  Sum_probs=33.7

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+...++||+|||.+..       +..|+|++||||+|+++.|..|
T Consensus         7 ~~~~~~~~alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W   45 (76)
T 2ed1_A            7 GNKVRRVKTIYDCQADN-------DDELTFIEGEVIIVTGEEDQEW   45 (76)
T ss_dssp             SCCCEEEEESSCCCCSS-------SSBCCCCSSCEEEESSCCSSSE
T ss_pred             CCCCeEEEECccCCCCC-------cCCcCcCCCCEEEEEEecCCCE
Confidence            44567899999999876       4579999999999999888888

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.79  E-value=2.2e-05  Score=53.44  Aligned_cols=37  Identities=35%  Similarity=0.662  Sum_probs=32.1

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|++||.+..       +..|+|++||++.|+.+.+..|
T Consensus         4 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   40 (62)
T 1k4u_S            4 KGSQVEALFSYEATQ-------PEDLEFQEGDIILVLSKVNEEW   40 (62)
T ss_dssp             CCEEEECCSCBCCCS-------SSBCCBCSSCEEEEEEESSSSC
T ss_pred             CCeEEEECCCCCcCC-------CCCccCCCCCEEEEEEeCCCCE
Confidence            456899999999876       4579999999999999988888

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.79  E-value=2.5e-05  Score=58.24  Aligned_cols=45  Identities=18%  Similarity=0.197  Sum_probs=36.3

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEE-eCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVV-SQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv-~~~d~~W  269 (269)
                      .....+++|+|||++..+ ..++.+..|+|++||||.|+ .++|..|
T Consensus        14 ~~~~~~~~Alydy~~~~~-~~~~~~~eLsf~~Gd~i~v~~~~~~~gW   59 (96)
T 1wie_A           14 SGKVHLCVARYSYNPFDG-PNENPEAELPLTAGKYLYVYGDMDEDGF   59 (96)
T ss_dssp             TSCEEEEEESSCCCGGGS-SCSCTTTBCCCCTTCEEEEESSCCSSSC
T ss_pred             CCCCcEEEECCccCCCcc-cCCCCCCeeeECCCCEEEEeEecCCCCE
Confidence            344568999999999863 33555778999999999999 7788888

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=97.79  E-value=2e-05  Score=53.95  Aligned_cols=37  Identities=38%  Similarity=0.837  Sum_probs=32.5

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++||+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         5 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   41 (64)
T 2ak5_A            5 SQLVVRAKFNFQQTN-------EDELSFSKGDVIHVTRVEEGGW   41 (64)
T ss_dssp             CCCEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCTTSE
T ss_pred             CCEEEEEccccCCcC-------cCcccCCCCCEEEEeEecCCCE
Confidence            457899999999876       4579999999999999988888

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=97.78  E-value=1.8e-05  Score=56.90  Aligned_cols=39  Identities=31%  Similarity=0.501  Sum_probs=33.8

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCC-C
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAY-W  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~-W  269 (269)
                      .....++||+|||.+..       +..|+|++||||.|+.+.|.+ |
T Consensus         7 ~~~~~~~~alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~gW   46 (80)
T 2i0n_A            7 PEFAKYARALKDYNVSD-------TSLLPFKRNDIITITFKDQENKW   46 (80)
T ss_dssp             CCCCCEEEESSCBCCCS-------SSSCCBCSSEEEEEEEESSSSSE
T ss_pred             CCCCeEEEECCCCCcCC-------CCCcCCCCCCEEEEEEecCCCCE
Confidence            45667899999999876       557999999999999998887 7

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.77  E-value=2.9e-05  Score=56.81  Aligned_cols=39  Identities=15%  Similarity=0.159  Sum_probs=32.9

Q ss_pred             cccceeeeeecccCCC--CCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDAS--SDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~--~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....++||+|+|.+.  .       +..|+|++|||++|+++.|.+|
T Consensus        13 ~~~~~~~~alydy~~~a~~-------~~eLsf~~Gd~i~v~~~~~~~W   53 (88)
T 2dbk_A           13 QNGPVFAKAIQKRVPCAYD-------KTALALEVGDIVKVTRMNINGQ   53 (88)
T ss_dssp             CCCCEEEEECSCBCCCTTC-------SSBCCBCTTCEEEEEEECTTSC
T ss_pred             CCCCEEEEEcccccCCCCC-------CCcccCCCCCEEEEEEecCCCE
Confidence            3455789999999975  4       4469999999999999999888

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=97.77  E-value=1.9e-05  Score=53.44  Aligned_cols=36  Identities=31%  Similarity=0.684  Sum_probs=31.5

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|+++|.+..       +..|+|++||++.|+++.|..|
T Consensus         4 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   39 (60)
T 1w70_A            4 HMRAEALFDFTGNS-------KLELNFKAGDVIFLLSRINKDW   39 (60)
T ss_dssp             SCEEEESSCBCCSS-------TTBCCBCTTCEEEEEEECSSSE
T ss_pred             CcEEEECccCCcCC-------CCCccCCCCCEEEEEEeCCCCe
Confidence            46789999999876       4479999999999999988888

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=97.76  E-value=2.2e-05  Score=53.27  Aligned_cols=36  Identities=39%  Similarity=0.694  Sum_probs=31.5

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         3 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   38 (61)
T 1y0m_A            3 KSAVKALFDYKAQR-------EDELTFTKSAIIQNVEKQDGGW   38 (61)
T ss_dssp             CCCEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CCEEEECcCCCcCC-------CCCcCCcCCCEEEEEEecCCCE
Confidence            35789999999876       4579999999999999988888

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=97.76  E-value=2.2e-05  Score=52.44  Aligned_cols=34  Identities=38%  Similarity=0.817  Sum_probs=30.1

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +++|+++|.+..       +..|+|++||++.|+++.|..|
T Consensus         3 ~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   36 (57)
T 1cka_A            3 YVRALFDFNGND-------EEDLPFKKGDILRIRDKPEEQW   36 (57)
T ss_dssp             EEEESSCBCCSS-------TTBCCBCTTCEEEEEECSSSSE
T ss_pred             EEEECCcCCCCC-------CCCCCCCCCCEEEEEEecCCCc
Confidence            689999999876       4479999999999999988888

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=97.75  E-value=2.7e-05  Score=53.31  Aligned_cols=39  Identities=31%  Similarity=0.540  Sum_probs=33.3

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....+++|+|||.+..       +..|+|++||++.|+.+.|..|
T Consensus         6 ~~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   44 (65)
T 3ulr_B            6 SDLGITAIALYDYQAAG-------DDEISFDPDDIITNIEMIDDGW   44 (65)
T ss_dssp             SSCCSCEEECSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CCCceEEEEEeeECCCC-------cCEeeEecCCEEEEEEecCCCE
Confidence            34557899999999876       4479999999999999988888

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=97.75  E-value=2.6e-05  Score=53.14  Aligned_cols=37  Identities=38%  Similarity=0.787  Sum_probs=32.1

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||++.|+.+.|..|
T Consensus         4 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   40 (62)
T 1uj0_A            4 MARRVRALYDFEAVE-------DNELTFKHGELITVLDDSDANW   40 (62)
T ss_dssp             CCEEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CCeEEEECccCCCCC-------cCCcCCCCCCEEEEEEeCCCCE
Confidence            346789999999877       4479999999999999988888

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=97.75  E-value=2.3e-05  Score=52.80  Aligned_cols=36  Identities=36%  Similarity=0.773  Sum_probs=31.5

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|++||.+..       +..|+|++||++.|+.+.+..|
T Consensus         4 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   39 (59)
T 2g6f_X            4 GSVVRAKFNFQQTN-------EDELSFSKGDVIHVTRVEEGGW   39 (59)
T ss_dssp             CCEEEESSCBCCSS-------TTBCCBCTTCEEEEEEECTTSE
T ss_pred             CcEEEECceeCCCC-------cCCcCCCCCCEEEEEEecCCCE
Confidence            45789999999876       4579999999999999888888

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.74  E-value=4e-05  Score=56.04  Aligned_cols=38  Identities=37%  Similarity=0.757  Sum_probs=33.1

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....++||+|||.+..       +..|+|++||||.|+++.|..|
T Consensus        15 ~~~~~~~Alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W   52 (88)
T 1x2q_A           15 KVARKVRALYDFEAVE-------DNELTFKHGEIIIVLDDSDANW   52 (88)
T ss_dssp             CCCEEEEESSCCCCCS-------SSCCCCCSSCEEEEEECSCSSS
T ss_pred             CCCeEEEEcccCCCCC-------cCccCCCCCCEEEEEEeCCCCE
Confidence            4457899999999887       4579999999999999988888

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=97.74  E-value=2.5e-05  Score=52.36  Aligned_cols=35  Identities=26%  Similarity=0.654  Sum_probs=30.8

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|++||.+..       +..|+|++||++.|+.+.++.|
T Consensus         2 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   36 (58)
T 1uti_A            2 RWARALYDFEALE-------EDELGFRSGEVVEVLDSSNPSW   36 (58)
T ss_dssp             CEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             eEEEECccCCCCC-------cCCCCCCCCCEEEEEEECCCCE
Confidence            3689999999876       4579999999999999988888

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=97.74  E-value=2.5e-05  Score=52.31  Aligned_cols=35  Identities=31%  Similarity=0.784  Sum_probs=31.0

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         3 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   37 (58)
T 1sem_A            3 KFVQALFDFNPQE-------SGELAFKRGDVITLINKDDPNW   37 (58)
T ss_dssp             CEEEESSCBCCSS-------TTBCCBCTTCEEEEEECSSSSE
T ss_pred             eEEEECcCCCCCC-------CCCcCCCCCCEEEEEEecCCCE
Confidence            5789999999876       4579999999999999988888

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.74  E-value=2.8e-05  Score=54.01  Aligned_cols=37  Identities=22%  Similarity=0.427  Sum_probs=32.2

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++||+++|.+..       +..|+|++|||++|+.+.+..|
T Consensus         6 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (68)
T 2dmo_A            6 SGEAHRVLFGFVPET-------KEELQVMPGNIVFVLKKGNDNW   42 (68)
T ss_dssp             CSEEEEECSSCCCCS-------SSSCCCCTTCEEEECEECSSSC
T ss_pred             CCCEEEECcCCCcCC-------cCCCCCCCCCEEEEEEeCCCCE
Confidence            346799999999876       4579999999999999998888

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=97.73  E-value=2.6e-05  Score=52.29  Aligned_cols=35  Identities=29%  Similarity=0.666  Sum_probs=30.7

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +.++|+++|.+..       +..|+|++||++.|+.+++..|
T Consensus         2 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   36 (58)
T 2bz8_A            2 VEAIVEFDYQAQH-------DDELTISVGEIITNIRKEDGGW   36 (58)
T ss_dssp             CCEEESSCBCCCS-------TTBCCBCTTCEEEEEECCTTTE
T ss_pred             EEEEECcccCCCC-------cCEeeECCCCEEEEEEeCCCCE
Confidence            4678999999876       4579999999999999988888

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=97.72  E-value=1.7e-05  Score=53.65  Aligned_cols=38  Identities=34%  Similarity=0.443  Sum_probs=31.5

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|++||.+..       +..|+|++||++.|+.+.+..|
T Consensus         4 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   41 (60)
T 2gnc_A            4 GSPEFAIAKFDYVGRS-------ARELSFKKGASLLLYHRASEDW   41 (60)
T ss_dssp             --CEEEEESSCBCCSS-------TTBCCBCTTCEEEEEEEEETTE
T ss_pred             CCCEEEEECCCCCcCC-------cCCcCCCCCCEEEEEEecCCCE
Confidence            3457899999999876       4579999999999999877777

>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A

Probab=97.71  E-value=4.9e-06  Score=78.74  Aligned_cols=69  Identities=23%  Similarity=0.375  Sum_probs=0.0

Q ss_pred             CCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        147 LGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       147 lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      +|+++..-....+++|..|.+||+|+++| |++||+|++|||+++.  +++++..++++..+.+.|+|.+..
T Consensus       372 ~G~~l~~~~~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~--~~~~l~~~l~~~~~~v~l~v~R~g  440 (448)
T 1ky9_A          372 EGAEMSNKGKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NIAELRKVLDSKPSVLALNIQRGD  440 (448)
T ss_dssp             ------------------------------------------------------------------------
T ss_pred             cceEeeccCCCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHcCCCeEEEEEEECC
Confidence            47766432223589999999999999999 6999999999999996  567888899877778888888754

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=97.70  E-value=2.9e-05  Score=52.10  Aligned_cols=34  Identities=32%  Similarity=0.562  Sum_probs=30.0

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +++|++||.+..       +..|+|++||++.|+.+.|..|
T Consensus         2 ~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   35 (58)
T 1jo8_A            2 WATAEYDYDAAE-------DNELTFVENDKIINIEFVDDDW   35 (58)
T ss_dssp             CEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             EEEECceECCCC-------CCCcccCCCCEEEEEEecCCCc
Confidence            579999999876       4579999999999999988888

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=97.70  E-value=2.6e-05  Score=54.08  Aligned_cols=39  Identities=13%  Similarity=0.135  Sum_probs=31.9

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++||+++|.+..+     .+..|+|++|||++|+.+++..|
T Consensus         5 ~~~~~~alydy~~~~~-----~~~eLs~~~Gd~i~v~~~~~~gW   43 (67)
T 2eyx_A            5 GPIYARVIQKRVPNAY-----DKTALALEVGELVKVTKINVSGQ   43 (67)
T ss_dssp             CSCBEEECCCBCCCTT-----CSSBCCBCSSEEEEEEEECTTSE
T ss_pred             CCEEEEEeEEECCCCC-----CCCccccCCCCEEEEEEecCCCE
Confidence            3468999999998721     14479999999999999988888

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=97.70  E-value=3.5e-05  Score=51.55  Aligned_cols=35  Identities=43%  Similarity=0.790  Sum_probs=31.0

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|+++|.+..       +..|+|++||+++|+.+++..|
T Consensus         4 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   38 (58)
T 2drm_A            4 IQVKALYDYDAQT-------GDELTFKEGDTIIVHQKDPAGW   38 (58)
T ss_dssp             EEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCTTSE
T ss_pred             cEEEECccCCCCC-------cCCcCCCCCCEEEEEEecCCCE
Confidence            5789999999887       4579999999999999988888

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=97.69  E-value=2.5e-05  Score=55.20  Aligned_cols=39  Identities=33%  Similarity=0.759  Sum_probs=33.3

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....++||+|||.+..       +..|+|++||||.|+.+.|..|
T Consensus        14 ~~~~~~~~Alydy~a~~-------~~eLsf~~Gd~i~Vl~~~~~gW   52 (72)
T 2l0a_A           14 QHEARKVRAIYDFEAAE-------DNELTFKAGEIITVLDDSDPNW   52 (72)
T ss_dssp             CCCCEEEEESSCBCCSS-------TTBCCBCTTCEEEEEEEEETTE
T ss_pred             CCCCeEEEECCccCCCC-------CCccCCCCCCEEEEEEecCCCE
Confidence            44557899999999887       4579999999999999888888

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.69  E-value=2.7e-05  Score=54.18  Aligned_cols=37  Identities=35%  Similarity=0.665  Sum_probs=32.5

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++||+++|.+..       +..|+|++||+|.|+.+.|..|
T Consensus         6 ~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (69)
T 2eqi_A            6 SGRTVKALYDYKAKR-------SDELTFCRGALIHNVSKEPGGW   42 (69)
T ss_dssp             CCCEEEESSCBCCCS-------SSCCCBCTTCEEESCCCCSSSC
T ss_pred             CCcEEEECeeECCCC-------cCccCCCCCCEEEEEEcCCCCe
Confidence            456799999999887       4579999999999999988888

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.69  E-value=3.1e-05  Score=54.94  Aligned_cols=37  Identities=38%  Similarity=0.579  Sum_probs=32.2

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||.+..       +..|+|++||+|+|+++++..|
T Consensus         6 ~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (77)
T 2d8j_A            6 SGQYFVALFDYQART-------AEDLSFRAGDKLQVLDTSHEGW   42 (77)
T ss_dssp             CCEEEEESSCBCCSS-------SSBCCBCTTCCEEEEECCSSSE
T ss_pred             CCCEEEEccCCCCCC-------CCccCCCCCCEEEEEECCCCCe
Confidence            345899999999876       4479999999999999988888

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=97.69  E-value=3e-05  Score=54.07  Aligned_cols=36  Identities=28%  Similarity=0.648  Sum_probs=31.4

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|++||.+..       +..|+|++|||+.|+++.|..|
T Consensus         3 ~~~~~Alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W   38 (68)
T 2ew3_A            3 QPCCRGLYDFEPEN-------QGELGFKEGDIITLTNQIDENW   38 (68)
T ss_dssp             CCEEEESSCBCCCS-------TTBCCBCTTCEEEEEEESSSSE
T ss_pred             CCEEEEeeeECCCC-------CCccCCCCCCEEEEEEecCCCE
Confidence            35789999999876       4579999999999999988888

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=97.68  E-value=4.4e-05  Score=52.69  Aligned_cols=34  Identities=35%  Similarity=0.663  Sum_probs=30.3

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +++|++||.+..       +..|+|++||++.|+.+.|..|
T Consensus         3 ~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   36 (65)
T 2nwm_A            3 AARLKFDFQAQS-------PKELTLQKGDIVYIHKEVDKNW   36 (65)
T ss_dssp             EEEECSCBCCCS-------TTBCCBCTTCEEEEEECCTTTC
T ss_pred             EEEEeeeECCCC-------cCccCCcCCCEEEEEEecCCCE
Confidence            579999999876       4579999999999999988888

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.68  E-value=3.9e-05  Score=53.23  Aligned_cols=38  Identities=26%  Similarity=0.558  Sum_probs=32.7

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +...+++|++||.+..       +..|+|++||++.|+.+.+..|
T Consensus         5 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (68)
T 1x2k_A            5 SSGKVFRALYTFEPRT-------PDELYFEEGDIIYITDMSDTNW   42 (68)
T ss_dssp             CCSEEEEESSCCCCCS-------TTBCCCCSSCEEEEEECSCSSE
T ss_pred             CCcEEEEECceECCCC-------CCcccCCCCCEEEEEEcCCCCE
Confidence            3456899999999876       4579999999999999988888

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=97.68  E-value=3.4e-05  Score=54.12  Aligned_cols=39  Identities=26%  Similarity=0.577  Sum_probs=33.1

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....+++|+|||.+..       +..|+|++||+++|+.+.|..|
T Consensus        12 ~~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   50 (73)
T 3h0h_A           12 GTGVTLFVALYDYEAIT-------EDDLSFHKGEKFQILNSSEGDW   50 (73)
T ss_dssp             CSTTCEEEESSCBCCSS-------TTBCCBCTTCEEEEEECSSSSE
T ss_pred             CCCCEEEEECccCCCCC-------CCcceEeCCCEEEEEEecCCCe
Confidence            34456889999999876       5579999999999999988888

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=97.67  E-value=3.7e-05  Score=51.44  Aligned_cols=35  Identities=40%  Similarity=0.853  Sum_probs=30.8

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         3 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   37 (58)
T 2vwf_A            3 TYVQALFDFDPQE-------DGELGFRRGDFIHVMDNSDPNW   37 (58)
T ss_dssp             CEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             eEEEECceECCCC-------cCCcCCCCCCEEEEEEcCCCCE
Confidence            4789999999876       4479999999999999988888

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=97.66  E-value=3.4e-05  Score=51.71  Aligned_cols=35  Identities=23%  Similarity=0.515  Sum_probs=30.7

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|++||.+..       +..|+|++||++.|+++.++.|
T Consensus         3 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   37 (58)
T 1zx6_A            3 EYVEALYQFDPQQ-------DGDLGLKPGDKVQLLEKLSPEW   37 (58)
T ss_dssp             CEEEECSCBCCCS-------TTBCCBCTTCEEEEEEECSSSE
T ss_pred             eEEEECceECCCC-------CCCccCCCCCEEEEEEecCCCE
Confidence            4689999999876       4579999999999999988888

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=97.65  E-value=3.9e-05  Score=52.47  Aligned_cols=35  Identities=31%  Similarity=0.584  Sum_probs=30.7

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         2 ~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   36 (65)
T 2oaw_A            2 ELVLALYDYQEKS-------PREVTMKKGDILTLLNSTNKDW   36 (65)
T ss_dssp             EEEEECSCBCCSS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             cEEEEcccCCccC-------CCCCCCCCCCEEEEEEcCCCCE
Confidence            3689999999876       4579999999999999988888

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=97.65  E-value=3.5e-05  Score=55.91  Aligned_cols=39  Identities=23%  Similarity=0.394  Sum_probs=31.6

Q ss_pred             cccceeeeeeccc-CCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDY-DASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy-~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....++||+||| .+..       +..|+|++|||+.|+++.|..|
T Consensus        15 ~~~~~~~~Alydy~~a~~-------~~eLsf~~GDiI~V~~~~~~gW   54 (83)
T 2ke9_A           15 PRGSLKVRALKDFWNLHD-------PTALNVRAGDVITVLEQHPDGR   54 (83)
T ss_dssp             --CCEEEEESSCBCCCSC-------TTBCCBCTTCEEEESCSSCSSC
T ss_pred             CCCCeEEEEccccCCCCC-------CCcccccCCCEEEEEEecCCCe
Confidence            3455789999999 5555       4479999999999999998888

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=97.65  E-value=4.7e-05  Score=52.03  Aligned_cols=37  Identities=32%  Similarity=0.761  Sum_probs=31.1

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC--CCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~--d~~W  269 (269)
                      ...+++|++||.+..       +..|+|++||++.|+.++  +..|
T Consensus         5 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~~W   43 (64)
T 2jte_A            5 AKEYCRTLFPYTGTN-------EDELTFREGEIIHLISKETGEAGW   43 (64)
T ss_dssp             SSEEEEESSCBCCSS-------SSBCCBCTTCEEEEEESCSSSTTE
T ss_pred             CCEEEEECccCCccC-------CCccCCCCCCEEEEEECCCCCCCE
Confidence            456789999999876       557999999999999885  6667

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=97.65  E-value=2.9e-05  Score=53.73  Aligned_cols=35  Identities=17%  Similarity=0.156  Sum_probs=30.6

Q ss_pred             eeeeeecccCCC--CCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDAS--SDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~--~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .++||+++|.+.  .       +..|+|++|||+.|+.+.+..|
T Consensus         2 ~~~~al~dy~~~~~~-------~~eLsf~~Gd~i~v~~~~~~~W   38 (67)
T 2bzy_A            2 VFAKAIQKRVPCAYD-------KTALALEVGDIVKVTRMNINGQ   38 (67)
T ss_dssp             EEEEECSCBCSEEEC-------TTBCCBCTTCEEEEEEECSSSE
T ss_pred             cEEEEeeeECCCCCC-------CCccccCCCCEEEEEEecCCCe
Confidence            478999999987  4       4579999999999999988888

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=97.65  E-value=4.5e-05  Score=51.83  Aligned_cols=37  Identities=32%  Similarity=0.544  Sum_probs=31.2

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|++||.+..       +..|+|++||++.|+.++| .|
T Consensus         4 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~-~W   40 (62)
T 2iim_A            4 LQDNLVIALHSYEPSH-------DGDLGFEKGEQLRILEQSG-EW   40 (62)
T ss_dssp             TTTCEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCS-SE
T ss_pred             CCCcEEEEcccCCCCC-------CCCcCCCCCCEEEEEEcCC-CE
Confidence            3456899999999876       4579999999999999976 67

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.65  E-value=5.2e-05  Score=54.48  Aligned_cols=39  Identities=23%  Similarity=0.509  Sum_probs=33.5

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....+++|+|+|.+..       +..|+|++||+|.|+.+.|..|
T Consensus         7 ~~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   45 (81)
T 2ysq_A            7 GDSIVSAEAVWDHVTMA-------NRELAFKAGDVIKVLDASNKDW   45 (81)
T ss_dssp             CCCCEEEEESSCCCCSS-------SSSCCCCTTCEEEEEECCSSSE
T ss_pred             CCCceEEEEeeeECCCC-------CCcCCCCCCCEEEEEEEcCcCE
Confidence            34567899999999876       4579999999999999988888

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=97.65  E-value=4e-05  Score=51.76  Aligned_cols=36  Identities=33%  Similarity=0.683  Sum_probs=31.3

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|++||.+..       +..|+|++||++.|+.+.+..|
T Consensus         5 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   40 (60)
T 2xmf_A            5 SPQCKALYAYDAQD-------TDELSFNANDIIDIIKEDPSGW   40 (60)
T ss_dssp             SCEEEESSCBCCSS-------TTBCCBCTTCEEEEEEECTTSE
T ss_pred             CcEEEECccCCcCC-------cCCcCCCCCCEEEEEEecCCCE
Confidence            45789999999876       4579999999999999988888

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.65  E-value=4.6e-05  Score=52.87  Aligned_cols=37  Identities=19%  Similarity=0.437  Sum_probs=32.0

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|++||.+..       +..|+|++||++.|+.+.+..|
T Consensus         6 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (68)
T 2dl4_A            6 SGNTYVALYKFVPQE-------NEDLEMRPGDIITLLEDSNEDW   42 (68)
T ss_dssp             CCCEEEESSCCCCSS-------TTBCCCCTTCEEEEEECCCSSE
T ss_pred             CCCEEEEeeeECCCC-------cCCcCCCCCCEEEEEEeCCCCE
Confidence            346789999999876       4579999999999999988888

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=97.64  E-value=4.7e-05  Score=51.02  Aligned_cols=35  Identities=26%  Similarity=0.593  Sum_probs=30.8

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         4 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   38 (58)
T 1zlm_A            4 KVFRALYTFEPRT-------PDELYFEEGDIIYITDMSDTNW   38 (58)
T ss_dssp             EEEEESSCBCCSS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             EEEEECccCCCCC-------CCCccCCCCCEEEEEEeCCCCE
Confidence            4789999999876       4579999999999999988888

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=97.64  E-value=4.3e-05  Score=53.38  Aligned_cols=38  Identities=29%  Similarity=0.670  Sum_probs=31.4

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEe-CCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVS-QDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~-~~d~~W  269 (269)
                      ....+++|+|||.+..       +..|+|++||++.|+. +.+..|
T Consensus         9 ~~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~W   47 (71)
T 1csk_A            9 PSGTECIAKYNFHGTA-------EQDLPFCKGDVLTIVAVTKDPNW   47 (71)
T ss_dssp             --CEEEEESSCBCCSS-------TTBCCBCTTCEEEEEEECSSTTE
T ss_pred             CCCCEEEEceeECcCC-------CCcCCCCCCCEEEEeECCCCCCC
Confidence            3456799999999887       4579999999999999 777878

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=97.64  E-value=5.9e-05  Score=52.98  Aligned_cols=39  Identities=33%  Similarity=0.664  Sum_probs=32.7

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC--CCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~--d~~W  269 (269)
                      .+...+++|+++|.+..       +..|+|++||++.|+.++  +..|
T Consensus         6 ~~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~~W   46 (73)
T 2k9g_A            6 TKSKDYCKVIFPYEAQN-------DDELTIKEGDIVTLINKDCIDVGW   46 (73)
T ss_dssp             CSSCEEEEECSCBCCSS-------TTBCCBCTTCEEEEEECCSSSTTE
T ss_pred             CCCccEEEECccCCCCC-------CCeeeECCCCEEEEEECCCCCCCE
Confidence            44567899999999876       557999999999999985  7777

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=97.63  E-value=4.6e-05  Score=50.88  Aligned_cols=35  Identities=26%  Similarity=0.371  Sum_probs=30.6

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +.++|+|+|.+..       +..|+|++||++.|+.+.+..|
T Consensus         2 ~~a~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   36 (58)
T 4e6r_A            2 IPAFVXFAYVAER-------EDELSLVXGSRVTVMEXCSDGW   36 (58)
T ss_dssp             EEEEECSCBCCCS-------TTBCCBCTTCEEEEEEECTTSE
T ss_pred             EEEEECccCCCCC-------CCEeeEeCCCEEEEeEcCCCCE
Confidence            5689999999876       4569999999999999988878

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=97.63  E-value=5.5e-05  Score=52.40  Aligned_cols=38  Identities=34%  Similarity=0.581  Sum_probs=32.4

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|+++|.+..       +..|+|++||++.|+.+.|..|
T Consensus         5 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (68)
T 2djq_A            5 SSGPRAKALCNYRGKN-------PGDLKFNKGDVILLRRQLDENW   42 (68)
T ss_dssp             SSCCEEEECSCCCSCC-------TTCCCCCTTCEEEEEECCCSSE
T ss_pred             CCceEEEECCCCCCCC-------cCCccCCCCCEEEEEEecCCCE
Confidence            3456899999999876       4579999999999999988888

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=97.62  E-value=5.1e-05  Score=52.71  Aligned_cols=36  Identities=42%  Similarity=0.618  Sum_probs=31.2

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC---CCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD---DAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~---d~~W  269 (269)
                      .++++|++||.+..       +..|+|++||++.|+.+.   +..|
T Consensus         3 ~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~~~W   41 (69)
T 1wyx_A            3 NVLAKALYDNVAES-------PDELSFRKGDIMTVLEQDTQGLDGW   41 (69)
T ss_dssp             EEEEEESSCBCCSS-------TTBCCBCTTCEEEEEETTGGGCTTE
T ss_pred             CEEEEECccCCcCC-------CCccCCcCCCEEEEeECCCCCCCCc
Confidence            46789999999876       557999999999999987   6777

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.61  E-value=4e-05  Score=55.65  Aligned_cols=38  Identities=24%  Similarity=0.343  Sum_probs=32.6

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC--CCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ--DDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~--~d~~W  269 (269)
                      ....+++|+|||.+..       +..|+|++|||++|+++  .+..|
T Consensus         6 ~~~~~~~al~dy~~~~-------~~eLsf~~Gd~i~v~~~~~~~~~W   45 (85)
T 2dlp_A            6 SGSGYVIALRSYITDN-------CSLLSFHRGDLIKLLPVATLEPGW   45 (85)
T ss_dssp             SCCCEEEESSCBCCSS-------SSBCCBCTTCEEEECCCSCCCTTE
T ss_pred             cCCEEEEECCCCCccC-------cCCccCcCCCEEEEEEccCCCCCe
Confidence            4567899999999876       45799999999999997  78888

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=97.61  E-value=4.5e-05  Score=51.81  Aligned_cols=35  Identities=29%  Similarity=0.450  Sum_probs=30.7

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|+++|.+..       +..|+|++||++.|+.+.|..|
T Consensus         4 ~~~~al~~y~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   38 (62)
T 2fpe_A            4 QTHRAIFRFVPRH-------EDELELEVDDPLLVELQAEDYW   38 (62)
T ss_dssp             CCEEECSCBCCSS-------TTBCCBCTTCEEEEEEECTTSE
T ss_pred             CEEEECccCCccC-------cCcCcCCCCCEEEEEEecCCCE
Confidence            4689999999876       4579999999999999988888

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.60  E-value=5.8e-05  Score=53.96  Aligned_cols=39  Identities=31%  Similarity=0.548  Sum_probs=33.4

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....+++|+++|.+..       +..|+|++||||+|+.+.+..|
T Consensus        14 ~~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   52 (79)
T 1x69_A           14 NDLGITAVALYDYQAAG-------DDEISFDPDDIITNIEMIDDGW   52 (79)
T ss_dssp             CCCCCCEEESSCCCCSS-------SSBCCCCTTCEEEEEEECSSSE
T ss_pred             CCCCeEEEECccCCCCC-------CCCcCcCCCCEEEEeEecCCCe
Confidence            34567899999999876       4579999999999999988888

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.60  E-value=2.8e-05  Score=58.05  Aligned_cols=43  Identities=28%  Similarity=0.391  Sum_probs=33.9

Q ss_pred             ceeeeeecccCCCCCCCCCC-CCCccccCCCCEEEEEeC-CCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPC-KDAGLSFNKGDILHVVSQ-DDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc-~e~gL~F~~GDIL~vv~~-~d~~W  269 (269)
                      ..++||+|||++..+...|| .+..|+|++||||+|+++ ++..|
T Consensus        17 ~~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~~~~~gW   61 (97)
T 2csq_A           17 ARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGF   61 (97)
T ss_dssp             CEEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEEEECTTCE
T ss_pred             ceEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEEecCCCCe
Confidence            45789999999986555555 577899999999999976 44447

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=97.60  E-value=7.8e-05  Score=52.60  Aligned_cols=38  Identities=32%  Similarity=0.483  Sum_probs=31.2

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..++||+++|.+.     +..+..|+|++|||+.|+.+.+..|
T Consensus         9 ~~~~~alydy~~~-----~~~~~eLs~~~Gd~i~v~~~~~~gW   46 (73)
T 2ebp_A            9 CGRARVHTDFTPS-----PYDTDSLKLKKGDIIDIISKPPMGT   46 (73)
T ss_dssp             SEEEEECSCBCCC-----TTCCSBCCBCSSCEEEEEECCSSSC
T ss_pred             ceEEEEeeccCCC-----CCCCCccCCCCCCEEEEEEeCCCCe
Confidence            3578999999985     1114579999999999999998888

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=97.60  E-value=6.9e-05  Score=52.10  Aligned_cols=36  Identities=28%  Similarity=0.560  Sum_probs=30.5

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||.+..       +..|+|++||||.|+++++ .|
T Consensus         3 ~~~~~~Alydy~a~~-------~~ELsf~~Gd~i~vl~~~~-~W   38 (67)
T 2b86_A            3 EEVIVIAKWDYTAQQ-------DQELDIKKNERLWLLDDSK-TW   38 (67)
T ss_dssp             CCEEEEESSCBCCSS-------TTSCCBCTTCEEEEEECSS-SS
T ss_pred             CCeEEEEeeeECCCC-------CCccccCCCCEEEEEecCC-Ce
Confidence            356899999999987       4579999999999999964 56

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.60  E-value=5.1e-05  Score=52.93  Aligned_cols=38  Identities=32%  Similarity=0.582  Sum_probs=32.3

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC---CCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD---DAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~---d~~W  269 (269)
                      ....+++|++||.+..       +..|+|++||++.|+.+.   +..|
T Consensus         5 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~~~W   45 (71)
T 2cre_A            5 SSGLLARALYDNCPDC-------SDELAFSRGDILTILEQHVPESEGW   45 (71)
T ss_dssp             CCCEEEEESSCCCCSS-------SSBCCCCSSCCEEEEESCCTTSTTE
T ss_pred             CCcEEEEECcccCcCC-------CCCCCCCCCCEEEEeEcCCCCCCCc
Confidence            3457899999999876       557999999999999986   7777

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.59  E-value=7e-05  Score=52.64  Aligned_cols=38  Identities=32%  Similarity=0.619  Sum_probs=31.7

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC---CCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ---DDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~---~d~~W  269 (269)
                      +...+++|++||.+..       +..|+|++||+|+|+++   .+..|
T Consensus         6 ~~~~~~~alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~~~~W   46 (73)
T 2dl7_A            6 SGVCFVKALYDYEGQT-------DDELSFPEGAIIRILNKENQDDDGF   46 (73)
T ss_dssp             CCCEEEEESSCBCCSS-------TTBCCBCTTCEEEEEECCCSSSSSC
T ss_pred             CCCEEEEECccCCcCC-------CCcCCCCCCCEEEEEECCCCCCCCc
Confidence            3456899999999876       45699999999999998   46777

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=97.59  E-value=4.6e-05  Score=52.87  Aligned_cols=36  Identities=33%  Similarity=0.634  Sum_probs=31.3

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .-+++|++||.+..       +..|+|++||++.|+++.|..|
T Consensus         6 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   41 (69)
T 4esr_A            6 APTVVALYDYTANR-------SDELTIHRGDIIRVFFKDNEDW   41 (69)
T ss_dssp             CCEEEESSCBCCCS-------TTBCCBCTTCEEEEEEECSSSE
T ss_pred             cCEEEECccCCCCC-------cCcCCCCCCCEEEEEEecCCCe
Confidence            34789999999876       5579999999999999988888

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.59  E-value=3.9e-05  Score=53.86  Aligned_cols=38  Identities=32%  Similarity=0.510  Sum_probs=32.6

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++++|+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         7 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   44 (72)
T 2dl8_A            7 GEPIEAIAKFDYVGRT-------ARELSFKKGASLLLYQRASDDW   44 (72)
T ss_dssp             CSCEEEEESSCBCCSS-------SSBCCBCTTCEEEEEEEEETTE
T ss_pred             CCCEEEEECccCCcCC-------CCEeccCCCCEEEEEeecCCCE
Confidence            3457899999999876       5579999999999999887777

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=97.59  E-value=4.9e-05  Score=53.49  Aligned_cols=38  Identities=26%  Similarity=0.629  Sum_probs=32.6

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|++||.+..       +..|+|++||+++|+.+.|..|
T Consensus        11 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   48 (73)
T 3c0c_A           11 LDQPSCKALYDFEPEN-------DGELGFREGDLITLTNQIDENW   48 (73)
T ss_dssp             CCSCEEEESSCBCCSS-------TTBCCBCTTCEEEEEEECSSSE
T ss_pred             CCCeEEEECccCCCCC-------CCCccCcCCCEEEEEEecCCCE
Confidence            3456789999999876       4579999999999999988888

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=97.58  E-value=5.4e-05  Score=52.27  Aligned_cols=37  Identities=24%  Similarity=0.530  Sum_probs=31.8

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         5 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   41 (67)
T 2o9s_A            5 FTGEAIAKFNFNGDT-------QVEMSFRKGERITLLRQVDENW   41 (67)
T ss_dssp             TSEEEEECSCBCCSS-------TTBCCBCTTCEEEEEEECSSSE
T ss_pred             CCEEEEECccCCcCC-------cCccCCCCCCEEEEEEecCCCE
Confidence            345789999999876       4579999999999999888888

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.58  E-value=5.8e-05  Score=54.00  Aligned_cols=37  Identities=22%  Similarity=0.381  Sum_probs=32.1

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||+|+|+.+++..|
T Consensus         6 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~gW   42 (80)
T 1ue9_A            6 SGEIAQVTSAYVASG-------SEQLSLAPGQLILILKKNTSGW   42 (80)
T ss_dssp             CCEEEEECSCCCCCS-------TTBCCCCTTCEEEEEEECSSSE
T ss_pred             CCeEEEECcccCCCC-------CCCCCCCCCCEEEEEEecCCCc
Confidence            456889999999876       5579999999999999988888

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.58  E-value=5e-05  Score=55.12  Aligned_cols=38  Identities=16%  Similarity=0.409  Sum_probs=32.9

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +...+++|+|||.+..       +..|+|++||+|.|++++|.+|
T Consensus        17 ~~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   54 (85)
T 2yuq_A           17 PEETVVIALYDYQTND-------PQELALRRNEEYCLLDSSEIHW   54 (85)
T ss_dssp             SSSCEEEESSCCCCSC-------SSBCCCCBTEEEEEEECCSSSE
T ss_pred             CCCeEEEECcCCCCCC-------CCcCCCCCCCEEEEEEecCCCe
Confidence            3456899999999876       5579999999999999998888

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=97.58  E-value=4e-05  Score=53.90  Aligned_cols=38  Identities=32%  Similarity=0.644  Sum_probs=32.6

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|++||.+..       +..|+|++||+|.|+.+.|..|
T Consensus         5 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (73)
T 2dbm_A            5 SSGPCCRALYDFEPEN-------EGELGFKEGDIITLTNQIDENW   42 (73)
T ss_dssp             CCCCEEEESSCBCCCS-------TTCCCBCTTCEEECCBCSSSSE
T ss_pred             CCCCEEEEccccCCCC-------CCCccCCCCCEEEEEEecCCCE
Confidence            3456899999999876       4579999999999999988888

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=97.58  E-value=4.8e-05  Score=51.73  Aligned_cols=35  Identities=29%  Similarity=0.622  Sum_probs=30.0

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC-CCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ-DDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~-~d~~W  269 (269)
                      +.++|+++|.+..       +..|+|++||++.|+.+ .+..|
T Consensus         2 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~W   37 (62)
T 2j6f_A            2 VDYIVEYDYDAVH-------DDELTIRVGEIIRNVKKLQEEGW   37 (62)
T ss_dssp             CCEEECSCBCCSS-------TTBCCBCTTCEEEEEEECSSTTE
T ss_pred             EEEEECccCCcCC-------cCCcCCcCCCEEEEEEecCCCCE
Confidence            4689999999876       45799999999999998 67777

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=97.58  E-value=5.3e-05  Score=52.04  Aligned_cols=35  Identities=34%  Similarity=0.548  Sum_probs=30.3

Q ss_pred             eeeeeecccCC-CCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDA-SSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p-~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..++|+++|.+ ..       +..|+|++||++.|+.+.|+.|
T Consensus         6 ~~~~alydy~~~~~-------~~eLs~~~Gd~i~v~~~~~~gW   41 (65)
T 2j05_A            6 RRVRAILPYTKVPD-------TDEISFLKGDMFIVHNELEDGW   41 (65)
T ss_dssp             CEEEESSCBCCCTT-------SSBCCBCTTCEEEEEEECTTSE
T ss_pred             cEEEEccccCCCCC-------CCcCcCCCCCEEEEeEecCCCE
Confidence            45899999998 55       4579999999999999988888

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=97.58  E-value=3.5e-05  Score=52.66  Aligned_cols=38  Identities=21%  Similarity=0.499  Sum_probs=30.8

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +...+++|+|||.+..       +..|+|++||++.|+++.+..|
T Consensus         5 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (65)
T 3u23_A            5 SKKRQCKVLFEYIPQN-------EDELELKVGDIIDINEEVEEGW   42 (65)
T ss_dssp             ---CEEEECSCBCCSS-------TTBCCBCTTCEEEEEEEEETTE
T ss_pred             CCCeEEEEeeeeCCCC-------cCCcCCCCCCEEEEEEecCCCE
Confidence            3456899999999876       4579999999999999887777

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=97.57  E-value=3.3e-05  Score=53.37  Aligned_cols=35  Identities=20%  Similarity=0.508  Sum_probs=30.7

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|++||.+..       +..|+|++||++.|+.+.+..|
T Consensus         2 ~~~~Alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~gW   36 (65)
T 2fei_A            2 RQCKVLFEYIPQN-------EDELELKVGDIIDINEEVEEGW   36 (65)
T ss_dssp             CEEECSSCCCCCS-------TTBCCCCTTCEEECCCCSSSSE
T ss_pred             eEEEECccCCcCC-------cCccCCCCCCEEEEEEecCCCE
Confidence            3689999999876       4579999999999999988888

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.57  E-value=5.5e-05  Score=53.61  Aligned_cols=39  Identities=28%  Similarity=0.599  Sum_probs=33.4

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....+++|+|||.+..       +..|+|++||++.|+.+.+..|
T Consensus         7 ~~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   45 (76)
T 1ujy_A            7 GSHQLIVKARFNFKQTN-------EDELSVCKGDIIYVTRVEEGGW   45 (76)
T ss_dssp             SCCCEEEECCSCBCCSS-------TTSCCBCSSCCEEESSCCSSSC
T ss_pred             CCCCEEEEECccCCcCC-------CCcccCCCCCEEEEEEecCCCE
Confidence            34567899999999876       4579999999999999988888

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=97.57  E-value=7.1e-05  Score=51.74  Aligned_cols=37  Identities=38%  Similarity=0.589  Sum_probs=32.1

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||++.|+.+.|..|
T Consensus         6 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (68)
T 2dl3_A            6 SGRPARAKFDFKAQT-------LKELPLQKGDIVYIYKQIDQNW   42 (68)
T ss_dssp             CSEEEEESSCBCCSS-------TTBCCBCTTCEEEEEECCSTTE
T ss_pred             CCcEEEECccCCCCC-------cCCccCCCCCEEEEeEecCCCE
Confidence            456899999999876       4579999999999999988888

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=97.57  E-value=5.5e-05  Score=52.80  Aligned_cols=38  Identities=18%  Similarity=0.338  Sum_probs=31.6

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|+|||.+..       +..|+|++||++.|+.+.|..|
T Consensus        11 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   48 (72)
T 4glm_A           11 GALTYGVALYRFQALE-------PNELDFEVGDKIRILATLEDGW   48 (72)
T ss_dssp             --CCEEEESSCBCCCS-------TTBCCBCTTCEEEEEEECSTTE
T ss_pred             CCCeEEEECccCCCCC-------CCcCCCCCCCEEEEEEccCCCE
Confidence            3456799999999876       4569999999999999888888

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=97.56  E-value=6.6e-05  Score=50.77  Aligned_cols=36  Identities=33%  Similarity=0.583  Sum_probs=31.5

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|+++|.+..       +..|+|++||++.|+.+.++.|
T Consensus         6 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   41 (62)
T 3ngp_A            6 KELVLVLYDYQEKS-------PRELTVKKGDILTLLNSTNKDW   41 (62)
T ss_dssp             CCEEEECSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CEEEEECcCCCCCC-------CCCccCCCCCEEEEeEecCCCe
Confidence            45789999998876       5579999999999999988888

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.55  E-value=7.3e-05  Score=53.23  Aligned_cols=37  Identities=35%  Similarity=0.578  Sum_probs=32.2

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||+|.|+.+.|..|
T Consensus         6 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (78)
T 2yuo_A            6 SGRRAKALLDFERHD-------DDELGFRKNDIITIISQKDEHC   42 (78)
T ss_dssp             CCEEEEESSCBCCSS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CceEEEECccCCCCC-------CCCccCCCCCEEEEEEecCCCE
Confidence            456789999999886       4579999999999999988888

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=97.55  E-value=6e-05  Score=52.09  Aligned_cols=35  Identities=23%  Similarity=0.502  Sum_probs=30.9

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|+++|.+..       +..|+|++||++.|+.+.|+.|
T Consensus         3 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   37 (67)
T 1gl5_A            3 EIVVAMYDFQATE-------AHDLRLERGQEYIILEKNDLHW   37 (67)
T ss_dssp             SCEEECSCBCCSS-------SSBCCBCTTCEEEEEECSSSSE
T ss_pred             eEEEECccCCCCC-------CCeecCCcCCEEEEEEccCCCc
Confidence            4689999999876       5579999999999999988888

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=97.55  E-value=4.7e-05  Score=52.56  Aligned_cols=38  Identities=24%  Similarity=0.460  Sum_probs=32.5

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +...+++|+++|.+..       +..|+|++||++.|+.+.|..|
T Consensus         6 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   43 (67)
T 1aww_A            6 SELKKVVALYDYMPMN-------ANDLQLRKGDEYFILEESNLPW   43 (67)
T ss_dssp             SCCCEEEBSSCCCCSS-------SSSCCCCSSCEEECCCCCSSSE
T ss_pred             CCCeEEEECccCCCCC-------CCCccCCCCCEEEEEEccCCCc
Confidence            3456789999999876       5579999999999999988888

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=97.55  E-value=6.8e-05  Score=52.39  Aligned_cols=35  Identities=31%  Similarity=0.678  Sum_probs=30.2

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC--CCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~--d~~W  269 (269)
                      .+++|++||.+..       +..|+|++|||+.|++++  +..|
T Consensus         3 ~~~~Alydy~a~~-------~~eLs~~~Gd~i~vl~~~~~~~gW   39 (69)
T 2ydl_A            3 DYCKVIFPYEAQN-------DDELTIKEGDIVTLINKDCIDVGW   39 (69)
T ss_dssp             EEEEESSCBCCCS-------TTBCCBCTTCEEEEEESCCSSTTE
T ss_pred             cEEEEcccCCCCC-------CCccccCCCCEEEEEEcCCCCCCE
Confidence            4689999999987       457999999999999986  7777

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=97.54  E-value=5.9e-05  Score=52.08  Aligned_cols=37  Identities=30%  Similarity=0.636  Sum_probs=29.9

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCc-cccCCCCEEEEEeC-CCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAG-LSFNKGDILHVVSQ-DDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~g-L~F~~GDIL~vv~~-~d~~W  269 (269)
                      ...+++|+|+|.+..       +.. |+|++|||+.|+.+ .+..|
T Consensus         6 ~~~~~~al~dy~~~~-------~~e~Lsf~~Gd~i~v~~~~~~~gW   44 (67)
T 3rnj_A            6 GRMRVKAIFSHAAGD-------NSTLLSFKEGDLITLLVPEARDGW   44 (67)
T ss_dssp             CCCEEEESSCBCCCS-------CTTBCCBCTTCEEEECSSSCBTTE
T ss_pred             CCeEEEEccccCCCC-------CCCCccCCCCCEEEEeeccCCCCC
Confidence            456899999999876       234 99999999999965 56677

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=97.54  E-value=6.5e-05  Score=54.54  Aligned_cols=39  Identities=31%  Similarity=0.558  Sum_probs=32.1

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....+++|++||.+..       +..|+|++||++.|+.++|..|
T Consensus        14 ~~~~~~~~Alydy~a~~-------~~eLsf~~Gd~i~Vl~~~~~gW   52 (83)
T 1neg_A           14 ETGKELVLALYDYQEKS-------PREVTMKKGDILTLLNSTNKDW   52 (83)
T ss_dssp             ---CCEEEESSCBCCSS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CCCceEEEEccccCCCC-------CCccccCCCCEEEEEEecCCCE
Confidence            34557899999999876       5579999999999999988888

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.54  E-value=8e-05  Score=51.55  Aligned_cols=37  Identities=32%  Similarity=0.504  Sum_probs=31.7

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....++|+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         6 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (68)
T 1x2p_A            6 SGEEFVAIADYAATD-------ETQLSFLRGEKILILRQTTADW   42 (68)
T ss_dssp             SCCEEEESSCCCCSS-------TTBCCCCTTCEEEEEECCSSSE
T ss_pred             CCCEEEECceECCCC-------cCCcCCCCCCEEEEEEcCCCCE
Confidence            345789999999876       4579999999999999988888

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=97.53  E-value=8.1e-05  Score=49.06  Aligned_cols=34  Identities=35%  Similarity=0.734  Sum_probs=29.1

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC-CCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD-AYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d-~~W  269 (269)
                      .++|+++|.+..       +..|+|++||++.|+.+.+ +.|
T Consensus         2 ~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~W   36 (54)
T 2a28_A            2 AMEAIYAYEAQG-------DDEISIDPGDIITVIRGDDGSGW   36 (54)
T ss_dssp             EEEBCSCBCCCS-------TTBCCBCTTCEEEEEECCCSSSE
T ss_pred             EEEECccCCcCC-------CCCccCCCCCEEEEEEecCCCCE
Confidence            478999999876       4579999999999999886 667

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=97.52  E-value=5.6e-05  Score=52.91  Aligned_cols=37  Identities=27%  Similarity=0.633  Sum_probs=31.6

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +...+++|+|||.+..       +..|+|++||+|.| ++.+..|
T Consensus         8 ~~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v-~~~~~~W   44 (72)
T 2kgt_A            8 HLGPKYVGLWDFKSRT-------DEELSFRAGDVFHV-ARKEEQW   44 (72)
T ss_dssp             SCCCEEECCTTCBCSS-------TTSCBCCTTCCEEE-EEECSSC
T ss_pred             CCCcEEEEcccCCCCC-------cCCcCCCCCCEEEE-eeCCCCE
Confidence            3456899999999876       45799999999999 9888888

>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A

Probab=97.52  E-value=1.3e-05  Score=72.70  Aligned_cols=57  Identities=19%  Similarity=0.372  Sum_probs=0.0

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      .|++|..|.+||||+++| |++||+|++|||+++.  +..++...++. +..++++|.+.+
T Consensus       254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g  310 (332)
T 3num_A          254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVV--SANDVSDVIKR-ESTLNMVVRRGN  310 (332)
T ss_dssp             -------------------------------------------------------------
T ss_pred             CceEEEEeccCCChHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECC
Confidence            478999999999999999 6999999999999995  45577777765 777899988854

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.52  E-value=7.7e-05  Score=53.19  Aligned_cols=37  Identities=32%  Similarity=0.612  Sum_probs=32.0

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||||.|+.+.+..|
T Consensus        16 ~~~~~~al~dy~~~~-------~~eLsf~~Gd~i~v~~~~~~gW   52 (78)
T 2ed0_A           16 YLEKVVAIYDYTKDK-------EDELSFQEGAIIYVIKKNDDGW   52 (78)
T ss_dssp             CSEEEEECSCBCCSS-------TTBCCBCSSCEEEEEEECSSSE
T ss_pred             cCEEEEECccCCccC-------cCcccccCCCEEEEEEeCCCCE
Confidence            345789999999876       5579999999999999988888

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.51  E-value=3.2e-05  Score=54.20  Aligned_cols=36  Identities=33%  Similarity=0.523  Sum_probs=31.3

Q ss_pred             ceeeeeecccCC-CCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDA-SSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p-~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+||+|+|.+ ..       +..|+|++||||.|+.+.|+.|
T Consensus         7 ~~~~~Alydy~~~~~-------~~eLsf~~Gd~i~v~~~~~~~W   43 (71)
T 2gqi_A            7 GRRVRAILPYTKVPD-------TDEISFLKGDMFIVHNELEDGW   43 (71)
T ss_dssp             CCCEEESSCCCCCTT-------SSCCCCCTTCBCCCCEECSSSC
T ss_pred             CCEEEECcccCCCCC-------CCCCCCCCCCEEEEEEecCCCE
Confidence            457899999999 65       4579999999999999988888

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=97.51  E-value=5.9e-05  Score=50.43  Aligned_cols=35  Identities=20%  Similarity=0.535  Sum_probs=29.6

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC-CCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD-AYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d-~~W  269 (269)
                      +.++|+++|.+..       +..|+|++||++.|+.+.+ +.|
T Consensus         2 ~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~W   37 (58)
T 1zuu_A            2 MENKVLYAYVQKD-------DDEITITPGDKISLVARDTGSGW   37 (58)
T ss_dssp             -CCEECSCBCCCS-------TTBCCBCTTCCEEEEECCSSSSE
T ss_pred             CEEEEeeeECCcC-------CCcccCCCCCEEEEeEcCCCCCC
Confidence            4579999999876       4579999999999999886 677

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=97.51  E-value=8e-05  Score=52.18  Aligned_cols=36  Identities=33%  Similarity=0.598  Sum_probs=31.5

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|+|||.+..       +..|+|++||++.|+.+.++.|
T Consensus         5 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   40 (73)
T 3thk_A            5 KELVLALYDYQEKS-------PREVTMKKGDILTLLNSTNKDW   40 (73)
T ss_dssp             CCEEEECSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CEEEEECcCCCcCC-------CCccCCCCCCEEEEEECCCCCe
Confidence            45789999999876       5579999999999999988888

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=97.51  E-value=8.7e-05  Score=49.99  Aligned_cols=35  Identities=20%  Similarity=0.590  Sum_probs=29.8

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC--CCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~--d~~W  269 (269)
                      .+++|++||.+..       +..|+|++||++.|+.+.  +..|
T Consensus         4 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~~W   40 (60)
T 1oot_A            4 PKAVALYSFAGEE-------SGDLPFRKGDVITILKKSDSQNDW   40 (60)
T ss_dssp             CEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSCTTSE
T ss_pred             cEEEECccCCcCC-------cCEeeEcCCCEEEEEEeCCCCCCe
Confidence            4789999999876       457999999999999986  5667

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.51  E-value=0.00012  Score=52.31  Aligned_cols=37  Identities=27%  Similarity=0.536  Sum_probs=32.2

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||||.|+.+.+..|
T Consensus         6 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (79)
T 2yun_A            6 SGRLCKALYSFQARQ-------DDELNLEKGDIVIIHEKKEEGW   42 (79)
T ss_dssp             CSEEEEESSCBCCSS-------TTBCCBCTTCEEEEEECCSSSC
T ss_pred             CCCEEEECccCCcCC-------CCCcCCCCCCEEEEEEcCCCCE
Confidence            356889999999876       4579999999999999988888

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=97.50  E-value=0.00022  Score=73.25  Aligned_cols=70  Identities=17%  Similarity=0.312  Sum_probs=58.1

Q ss_pred             CCCCCeEEeccCCCCcEEEEEecCC--------ChhhhcCC-CCCCCeEEEECCEecCCCChHHHHHHHHc-CCCeEEEE
Q psy14174        144 NEPLGATIKTDEESGKIVVARVMHG--------GAADRSGL-IHVGDEVCEVNGINVEGKTPGDVLKILQS-SEGTITFK  213 (269)
Q Consensus       144 ~~~lG~ti~~~~~~~~i~V~~V~~g--------g~A~r~Gl-L~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~l~  213 (269)
                      ..++|+.+...  .++++|..|.+|        |||+++|. |+ ||+|++|||+++.++.  ++..+++. .+..|.|+
T Consensus       736 ~~g~G~~~~~~--~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~  810 (1045)
T 1k32_A          736 SGRIACDFKLD--GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARIR  810 (1045)
T ss_dssp             CCBCSEEEEEE--TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEEE
T ss_pred             cceecEEEEEe--CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEEE
Confidence            45889988765  468999999998        99999993 58 9999999999998875  67778876 46788999


Q ss_pred             EEeCC
Q psy14174        214 LIPAD  218 (269)
Q Consensus       214 v~p~~  218 (269)
                      |.+.+
T Consensus       811 v~r~~  815 (1045)
T 1k32_A          811 LSGKG  815 (1045)
T ss_dssp             EECSS
T ss_pred             EECCC
Confidence            98854

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=97.50  E-value=9e-05  Score=49.80  Aligned_cols=35  Identities=23%  Similarity=0.464  Sum_probs=30.0

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC-CCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ-DDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~-~d~~W  269 (269)
                      .+++|++||.+..       +..|+|++||++.|+++ .++.|
T Consensus         3 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~W   38 (60)
T 2v1q_A            3 ERGIVQYDFMAES-------QDELTIKSGDKVYILDDKKSKDW   38 (60)
T ss_dssp             CEEEECSCBCCCS-------TTBCCBCTTCEEEEEESSSCSSE
T ss_pred             cEEEEeeeECCCC-------CCCccCCCCCEEEEEeCCCCCCC
Confidence            4789999999876       45799999999999998 47777

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=97.49  E-value=5.8e-05  Score=50.61  Aligned_cols=35  Identities=26%  Similarity=0.571  Sum_probs=30.3

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|++||.+..       +..|+|++||++.|+.+.+..|
T Consensus         2 ~~~~al~d~~~~~-------~~eLs~~~Gd~i~v~~~~~~gW   36 (59)
T 1yn8_A            2 QRAVALYDFEPEN-------DNELRLAEGDIVFISYKHGQGW   36 (59)
T ss_dssp             EEEEECSCBCCCS-------TTBCCBCTTCEEEEEEEEETTE
T ss_pred             CEEEECccCCCCC-------CCCcCCCCCCEEEEEEcCCCCe
Confidence            3689999999876       4579999999999999888877

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.49  E-value=9.1e-05  Score=51.56  Aligned_cols=37  Identities=32%  Similarity=0.652  Sum_probs=31.3

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC--CCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~--d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||++.|+.++  +..|
T Consensus         6 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~~W   44 (70)
T 2da9_A            6 SGDYCKVIFPYEAQN-------DDELTIKEGDIVTLINKDCIDVGW   44 (70)
T ss_dssp             SSEEEEECSCCCCSS-------TTBCCCCTTEEEEEEECCCSSTTE
T ss_pred             CCcEEEECcCCCCCC-------cCEeeEcCCCEEEEEECCCCCCCe
Confidence            446889999999876       457999999999999985  7777

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=97.49  E-value=3.8e-05  Score=53.47  Aligned_cols=38  Identities=26%  Similarity=0.551  Sum_probs=32.3

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|+++|.+..       +..|+|++||++.|+.+.|..|
T Consensus         5 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (70)
T 2ecz_A            5 SSGGEAIAKFNFNGDT-------QVEMSFRKGERITLLRQVDENW   42 (70)
T ss_dssp             CCCBCEEESSCCCCCS-------TTBCCCCTTCBCEEEEEEETTE
T ss_pred             CCCCEEEECccCCCCC-------cCCcCCCCCCEEEEEEecCCCe
Confidence            3456789999999876       4579999999999999877777

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=97.49  E-value=7.9e-05  Score=53.44  Aligned_cols=35  Identities=29%  Similarity=0.703  Sum_probs=31.1

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|+++|.+..       +..|+|++||++.|+++++..|
T Consensus         6 ~~~~Alydy~~~~-------~~eLs~~~Gd~i~vl~~~~~~W   40 (79)
T 3cqt_A            6 TLFEALYDYEART-------EDDLSFHKGEKFQILNSSEGDW   40 (79)
T ss_dssp             CCEEESSCBCCCS-------TTBCCBCTTCEEEEEECTTSSE
T ss_pred             cEEEECccCCCCC-------cCcCCCCCCCEEEEEEecCCCe
Confidence            4789999999876       5579999999999999988888

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.49  E-value=0.0001  Score=51.25  Aligned_cols=37  Identities=30%  Similarity=0.531  Sum_probs=32.0

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         6 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~gW   42 (70)
T 2ct3_A            6 SGTPYRAMYQYRPQN-------EDELELREGDRVDVMQQCDDGW   42 (70)
T ss_dssp             CCEEEEESSCBCCSS-------TTBCCBCTTEEEEEEEECSSSC
T ss_pred             CCcEEEECccCCcCC-------cCCccCCCCCEEEEEEECCCCE
Confidence            346789999999876       4579999999999999988888

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=97.48  E-value=2.5e-05  Score=59.67  Aligned_cols=38  Identities=16%  Similarity=0.369  Sum_probs=33.0

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++++|+|||.+..       +..|+|++|||+.|+++.|++|
T Consensus         3 ~~~~~~~Alydy~a~~-------~~ELsf~~Gd~i~vl~~~~~~W   40 (108)
T 2rqv_A            3 LGSLYAIVLYDFKAEK-------ADELTTYVGENLFICAHHNCEW   40 (108)
T ss_dssp             CSCCCEEESSCCCCCS-------SSBCCCCSSEEECCCCEETTTE
T ss_pred             CCCeEEEECCCcCCCC-------CCcCCcCCCCEEEEeEecCCCE
Confidence            3457899999999887       5579999999999999988888

>3uit_A INAD-like protein, maguk P55 subfamily member 5, LIN-7 homolog B; L27 domain, cell polarization, cell adhesion; 2.05A {Mus musculus} PDB: 1y76_A 1y76_B 1y74_A

Probab=97.48  E-value=0.0003  Score=61.26  Aligned_cols=101  Identities=19%  Similarity=0.270  Sum_probs=70.7

Q ss_pred             HHHHHHHHHhhccc-----ccChhhHHHHHHHhcChhHHHHHhhhhccccc----cC--------CCccCchHHhHHHHH
Q psy14174         14 SSLLETLQESQSTF-----SANDEELLFLSSLLQSKELNALVHVHNSIVNE----QS--------HPVLSNAMQISLEVL   76 (269)
Q Consensus        14 ~~vL~~L~~~~~~~-----~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~~----~~--------~p~~~~~~~~~~~v~   76 (269)
                      +++|..|++++.+.     ....+++..|+.+|+||-|+.++.++.++.+.    ..        .|+..-..+-+-+.+
T Consensus        10 ~~~l~~~~rl~~kl~~~g~~~~~~~l~~~~~~l~splf~~il~lq~s~~~l~~q~~~~~~~~~~~~~~~~~~~~qLLdSL   89 (265)
T 3uit_A           10 MQVLQVLDRLRGKLQEKGDTTQNEKLSAFYETLKSPLFNQILTLQQSIKQLKGQLSHIPLEVLFQGPVKILEIEDLFSSL   89 (265)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCSSHHHHHHHHHHHHCHHHHHHHHHHHHCTTBCSCCTTSCGGGTSCCCSCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccccchHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhccCChHHHHhchHHHhHHHHHHHHH
Confidence            57777888776664     44678899999999999999999999999865    11        122222233333444


Q ss_pred             HHH-hhccC--CChhHHHHHHhccCchhhhhhhhccccccc
Q psy14174         77 DVL-LSRLA--LNDDCKELFVLLQRPNLQGLLCAHDAVAQK  114 (269)
Q Consensus        77 ~~l-~~~~~--~~~~~~el~~ll~~p~~~~ll~a~d~v~~~  114 (269)
                      +.+ +....  ...+..=|..+|.+|.+++|+.+||.+...
T Consensus        90 ~eI~~~L~d~~sqeDl~FL~~LLesp~L~sLlKIHerL~~~  130 (265)
T 3uit_A           90 KHIQHTLVDSQSQEDISLLLQLVQNKDFQNAFKIHNAITVH  130 (265)
T ss_dssp             HHHHHHCCSHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccccccccHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence            444 32221  023566689999999999999999999643

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.48  E-value=7.7e-05  Score=53.39  Aligned_cols=39  Identities=28%  Similarity=0.583  Sum_probs=32.8

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC--CCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD--AYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d--~~W  269 (269)
                      .....+++|++||.+..       +..|+|++||||.|+.+.+  ..|
T Consensus        14 ~~~~~~~~al~dy~~~~-------~~eLsf~~Gd~i~v~~~~~~~~~W   54 (80)
T 2d8h_A           14 LNQPIEVTALYSFEGQQ-------PGDLNFQAGDRITVISKTDSHFDW   54 (80)
T ss_dssp             CSSCEEEECSSCEECSS-------TTBCEECTTCEEEEEECCSCSSSE
T ss_pred             CCCCEEEEECccCCcCC-------CCeeeEcCCCEEEEeECcCCCCCe
Confidence            45567899999999876       4579999999999999875  677

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=97.48  E-value=8.9e-05  Score=51.69  Aligned_cols=37  Identities=22%  Similarity=0.583  Sum_probs=31.3

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC--CCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ--DDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~--~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||++.|+++  .+..|
T Consensus         5 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~~W   43 (71)
T 1u5s_A            5 VLHVVQTLYPFSSVT-------EEELNFEKGETMEVIEKPENDPEW   43 (71)
T ss_dssp             SSSEEEESSCCCCCS-------SSBCCCCSSCCEEEEECCCTTTCE
T ss_pred             ccEEEEEcccCCCCC-------CCcccCCCCCEEEEEECCCCCCCC
Confidence            345789999999876       45799999999999998  67777

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=97.47  E-value=5.8e-05  Score=53.30  Aligned_cols=38  Identities=37%  Similarity=0.795  Sum_probs=30.5

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC-CCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD-DAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~-d~~W  269 (269)
                      ...++++|++||.+..       +..|+|++||||.|+.+. |..|
T Consensus         7 ~~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~W   45 (74)
T 1gbq_A            7 VGSMEAIAKYDFKATA-------DDELSFKRGDILKVLNEECDQNW   45 (74)
T ss_dssp             ---CEEEESSCBCCSS-------TTBCCBCTTCEEECCBCSSCSSE
T ss_pred             CCCeEEEECccCCCCC-------CCeeeEcCCCEEEEeEecCCCCE
Confidence            3457799999999876       457999999999999987 5667

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.47  E-value=0.00012  Score=52.60  Aligned_cols=37  Identities=16%  Similarity=0.411  Sum_probs=30.7

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCC-CC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDA-YW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~-~W  269 (269)
                      ...+++|+|||.+..       +..|+|++||||.|+++.+. .|
T Consensus        16 ~~~~~~Alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~~W   53 (81)
T 1x6g_A           16 PGTQCITKCEHTRPK-------PGELAFRKGDVVTILEACENKSW   53 (81)
T ss_dssp             TTCEEEESSCBSSCC-------TTCCCBCTTCEEEEEECCCSSSE
T ss_pred             CCCEEEECCCCCcCC-------CCCCCCCCCCEEEEEeccCCCCe
Confidence            345689999999876       44699999999999998765 77

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.47  E-value=9.1e-05  Score=54.16  Aligned_cols=38  Identities=24%  Similarity=0.410  Sum_probs=33.0

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++++|+|+|.+..       +..|+|++||||+|+.+.+..|
T Consensus        15 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~gW   52 (88)
T 2cub_A           15 DLNMPAYVKFNYMAER-------EDELSLIKGTKVIVMEKCSDGW   52 (88)
T ss_dssp             CCCEEEEESSCCCCCS-------TTBCCCCTTEEEEEEEECTTSE
T ss_pred             CCCCEEEEccccCCCC-------CCCcCCCCCCEEEEEEccCCCe
Confidence            3457899999999876       5579999999999999988888

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.46  E-value=9.1e-05  Score=52.83  Aligned_cols=39  Identities=23%  Similarity=0.553  Sum_probs=32.6

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC-CCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD-AYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d-~~W  269 (269)
                      .....+++|+|||.+..       +..|+|++||+|.|+.+.| ..|
T Consensus        10 ~~~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~W   49 (78)
T 2dl5_A           10 RNYPLTCKVVYSYKASQ-------PDELTIEEHEVLEVIEDGDMEDW   49 (78)
T ss_dssp             TTSSEEEEECSCBCCCS-------TTBCCBCSSEEEEEEECCSSSSE
T ss_pred             ccCCcEEEEceeECCCC-------CCCCCCCCCCEEEEEeccCCCCc
Confidence            34457899999999876       4579999999999999975 777

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.45  E-value=4.8e-05  Score=54.01  Aligned_cols=38  Identities=29%  Similarity=0.609  Sum_probs=32.3

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|+|||.+..       +..|+|++||+|.|+.+.|..|
T Consensus         8 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   45 (76)
T 2epd_A            8 EGVVEAVACFAYTGRT-------AQELSFRRGDVLRLHERASSDW   45 (76)
T ss_dssp             SCCEEEEESSCEECSS-------TTBCEECTTCEEEEEEEEETTE
T ss_pred             CCCEEEEECcCCCCCC-------CCccCCCCCCEEEEEEeCCCCE
Confidence            3457899999999876       4579999999999999888878

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=97.45  E-value=0.00011  Score=50.93  Aligned_cols=36  Identities=33%  Similarity=0.621  Sum_probs=31.3

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|+++|.+..       +..|+|++||+++|+.+.+..|
T Consensus         8 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   43 (69)
T 2dil_A            8 AQEYRALYDYTAQN-------PDELDLSAGDILEVILEGEDGW   43 (69)
T ss_dssp             CCEEECCSCBCCSS-------SSSCCBCTTCEEEEEECCSSSE
T ss_pred             CcEEEECccCCccC-------cCccCCCCCCEEEEEECCCCCE
Confidence            45789999999876       4579999999999999988888

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=97.45  E-value=8.9e-05  Score=51.79  Aligned_cols=36  Identities=28%  Similarity=0.448  Sum_probs=31.3

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|+|+|.+..       +..|+|++|||+.|+.+.|..|
T Consensus         6 ~~~~~al~~y~~~~-------~~eLs~~~Gd~i~v~~~~~~gW   41 (71)
T 2fpf_A            6 EQTHRAIFRFVPRH-------EDELELEVDDPLLVELQAEDYW   41 (71)
T ss_dssp             CCCEEECSCBCCSS-------TTBCCBCTTCEEEEEEECTTSE
T ss_pred             CeEEEECeeECccC-------CCcccCcCCcEEEEeEecCCCE
Confidence            34789999999876       4579999999999999988888

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=97.44  E-value=9.1e-05  Score=50.34  Aligned_cols=36  Identities=33%  Similarity=0.538  Sum_probs=30.1

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|++||.+..       +..|+|++||++.|+.+.+..|
T Consensus         6 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   41 (64)
T 4f14_A            6 LRTYRAMYDYSAQD-------EDEVSFRDGDYIVNVQPIDDGW   41 (64)
T ss_dssp             --CEEESSCBCCCS-------TTBCCBCTTCEEEEEEECSSSE
T ss_pred             CEEEEECeeeCCcC-------CCcCCCCCCCEEEEEEeCCCCe
Confidence            45689999999876       4469999999999999988888

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.44  E-value=0.00016  Score=51.62  Aligned_cols=37  Identities=19%  Similarity=0.324  Sum_probs=31.5

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC----CCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD----AYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d----~~W  269 (269)
                      ...+++|+|||.+..       +..|+|++||+|+|+.+.|    ..|
T Consensus        12 ~~~~~~Alydy~~~~-------~~eLs~~~Gd~i~vl~~~~~~~~~~W   52 (79)
T 1uhc_A           12 GNQVYFAVYTFKARN-------PNELSVSANQKLKILEFKDVTGNTEW   52 (79)
T ss_dssp             SSCCEEESSCBCCCS-------SSBCCBCTTCEEEEEESCCTTSCTTE
T ss_pred             CCeEEEECccCCCCC-------CCccCCCCCCEEEEEECCCCCCCCCe
Confidence            345789999999886       5579999999999999886    777

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.44  E-value=9.7e-05  Score=51.93  Aligned_cols=38  Identities=26%  Similarity=0.450  Sum_probs=31.5

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC--CCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~--d~~W  269 (269)
                      ....+++|+++|.+..       +..|+|++||+|.|+.+.  |..|
T Consensus         5 ~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~~W   44 (73)
T 2dm1_A            5 SSGGTAVARYNFAARD-------MRELSLREGDVVRIYSRIGGDQGW   44 (73)
T ss_dssp             CSSSEEEESSCBCCCS-------TTBCCBCTTCEEECCBSSSSSSSC
T ss_pred             CCCCEEEECccCCcCC-------CCcCCCCCCCEEEEEEecCCCCCe
Confidence            3456799999999876       457999999999999987  5578

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=97.44  E-value=0.00014  Score=50.97  Aligned_cols=36  Identities=28%  Similarity=0.545  Sum_probs=30.3

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|+|.+..       +..|+|++||+|.|+.++ ..|
T Consensus         6 ~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~-~~W   41 (72)
T 2jw4_A            6 EEVVVVAKFDYVAQQ-------EQELDIKKNERLWLLDDS-KSW   41 (72)
T ss_dssp             CCEEEECSSCCCCSS-------TTSCCCCTTCEEEEEECS-SSS
T ss_pred             CCeEEEECcCCCcCC-------CCcccCCCCCEEEEEECC-CCE
Confidence            346899999999886       457999999999999985 467

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=97.44  E-value=0.00013  Score=50.53  Aligned_cols=37  Identities=24%  Similarity=0.501  Sum_probs=30.9

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|+|||.+..       +..|+|++||++.|++++ .+|
T Consensus         6 ~~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~-~~W   42 (68)
T 2k2m_A            6 GALKWVLCNYDFQARN-------SSELSVKQRDVLEVLDDS-RKW   42 (68)
T ss_dssp             CCCCEEEESSCBCCCS-------SSBCCBCTTCEEEEEECS-SSE
T ss_pred             CCCEEEEECccCCCCC-------CCcccCCCCCEEEEEEcC-CCe
Confidence            3456899999999877       557999999999999987 556

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=97.44  E-value=9.6e-05  Score=49.70  Aligned_cols=36  Identities=42%  Similarity=0.776  Sum_probs=29.3

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC-CCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD-AYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d-~~W  269 (269)
                      ...++|+++|.+..       +..|+|++||++.|+.+.+ ..|
T Consensus         3 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~W   39 (60)
T 2x3w_D            3 GVRVRALYDYDGQE-------QDELSFKAGDELTKLGEEDEQGW   39 (60)
T ss_dssp             -CEEEECSCBCCSS-------SSBCCBCTTCEEEECSCCCSSSE
T ss_pred             CCEEEECcccCccC-------CCcccCCCCCEEEEEEccCCCCc
Confidence            35689999999876       4579999999999999854 466

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=97.43  E-value=0.00017  Score=52.89  Aligned_cols=38  Identities=21%  Similarity=0.571  Sum_probs=32.0

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC--CCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ--DDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~--~d~~W  269 (269)
                      ....+++|+|+|.+..       +..|+|++||||.|+.+  .+..|
T Consensus        15 ~~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~~W   54 (91)
T 1wx6_A           15 RVLHVVQTLYPFSSVT-------EEELNFEKGETMEVIEKPENDPEW   54 (91)
T ss_dssp             CCCEEEEESSCCCCSS-------SSBCCCCTTCEEEEEECCSSCTTE
T ss_pred             CccEEEEEeecCCcCC-------CCcccCCCCCEEEEEECCCCCCCc
Confidence            3446799999999876       45799999999999998  67777

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=97.43  E-value=8.3e-05  Score=52.49  Aligned_cols=35  Identities=26%  Similarity=0.571  Sum_probs=30.7

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|++||.+..       +..|+|++||++.|+++.+..|
T Consensus         6 ~~~~Alydy~a~~-------~~eLs~~~Gd~i~v~~~~~~gW   40 (73)
T 2lcs_A            6 QRAVALYDFEPEN-------DNELRLAEGDIVFISYKHGQGW   40 (73)
T ss_dssp             EEEEESSCBCCSS-------TTBCCBCTTCEEEEEEEETTTE
T ss_pred             CEEEECccCCCCC-------CCccCCcCCCEEEEEEEcCCCE
Confidence            4689999999876       4579999999999999988888

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=97.42  E-value=0.00011  Score=48.94  Aligned_cols=34  Identities=24%  Similarity=0.608  Sum_probs=28.7

Q ss_pred             eeeeeccc-CCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDY-DASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy-~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .++|++|| .+..       +..|+|++||++.|+.+++..|
T Consensus         2 ~~~al~d~~~~~~-------~~eLs~~~Gd~i~v~~~~~~gW   36 (58)
T 1zuy_A            2 MFEAAYDFPGSGS-------PSELPLKKGDVIYITREEPSGW   36 (58)
T ss_dssp             EEEESSCBCCCSC-------TTBCCBCTTCEEEEEEECTTSE
T ss_pred             EEEEecccCCCCC-------CCcCCCCCCCEEEEEEecCCCe
Confidence            47899999 5654       4479999999999999988888

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=97.42  E-value=0.00014  Score=50.62  Aligned_cols=36  Identities=25%  Similarity=0.486  Sum_probs=31.0

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC-CCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD-DAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~-d~~W  269 (269)
                      ..+++|++||.+..       +..|+|++||++.|+.+. +..|
T Consensus         6 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~W   42 (71)
T 2jt4_A            6 KKRGIVQYDFMAES-------QDELTIKSGDKVYILDDKKSKDW   42 (71)
T ss_dssp             CEEEEECSCBCCSS-------TTBCCBCTTCEEEEEESSSCSSE
T ss_pred             CCEEEEcccCCCCC-------CCcccCCCCCEEEEEECCCCCCC
Confidence            56889999999876       457999999999999986 7777

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=97.40  E-value=0.00011  Score=50.89  Aligned_cols=35  Identities=26%  Similarity=0.614  Sum_probs=29.6

Q ss_pred             eeeeeecccC-CCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYD-ASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~-p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..++|++||+ +..       +..|+|++||++.|+.+.+..|
T Consensus         3 ~~~~alydy~~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   38 (69)
T 1ruw_A            3 PKFEAAYDFPGSGS-------SSELPLKKGDIVFISRDEPSGW   38 (69)
T ss_dssp             SEEEESSCBCCCSC-------TTBCCBCTTCEEEEEEECTTSE
T ss_pred             cEEEEccccCCCCC-------CCcccCCCCCEEEEEEecCCCe
Confidence            3579999996 655       5579999999999999988878

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.40  E-value=0.00012  Score=50.99  Aligned_cols=37  Identities=19%  Similarity=0.364  Sum_probs=31.6

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|++||.+..       +..|+|++||++.|+.+++..|
T Consensus         7 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   43 (71)
T 2dnu_A            7 GEEKYVTVQPYTSQS-------KDEIGFEKGVTVEVIRKNLEGW   43 (71)
T ss_dssp             CSEEEECSSCBCCSS-------TTBCCBCTTCEEEECCCCSSSE
T ss_pred             CCCEEEECCccCCCC-------CCCCcCCCCCEEEEeECCCCCe
Confidence            345789999998876       4579999999999999988888

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=97.39  E-value=0.0001  Score=50.83  Aligned_cols=37  Identities=30%  Similarity=0.549  Sum_probs=30.4

Q ss_pred             cceeeeeecccCC-CCCCCCCCCCCccccCCCCEEEEEeC-CCCCC
Q psy14174        226 SKIRVRAHFDYDA-SSDPYIPCKDAGLSFNKGDILHVVSQ-DDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p-~~D~~ipc~e~gL~F~~GDIL~vv~~-~d~~W  269 (269)
                      ...+++|+++|.+ ..       +..|+|++||++.|+.+ .+..|
T Consensus         5 ~~~~~~al~dy~a~~~-------~~eLs~~~Gd~i~v~~~~~~~~W   43 (67)
T 2kxc_A            5 KKQKVKTIFPHTAGSN-------KTLLSFAQGDVITLLIPEEKDGW   43 (67)
T ss_dssp             CCCEEEESSCBCCSSC-------SSBCCBCTTCEEEESSSSCBTTE
T ss_pred             CCEEEEEeecCCCCCC-------CCCCcCCCCCEEEEeECCCCCCc
Confidence            3467899999995 55       44799999999999996 77777

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=97.39  E-value=0.00012  Score=53.10  Aligned_cols=36  Identities=28%  Similarity=0.509  Sum_probs=31.5

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|+|||.+..       +..|+|++||++.|+++.|..|
T Consensus         6 ~~~~~Alydy~a~~-------~~eLsf~~Gd~i~vl~~~~~~W   41 (84)
T 4ag1_C            6 VTLFVALYDYNATR-------WTDLSFHKGEKFQILEFGPGDW   41 (84)
T ss_dssp             CCEEEESSCBCCSB-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CEEEEEcccCCCCC-------CCcccccCCCEEEEEEecCCCe
Confidence            45789999999876       4579999999999999988888

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.39  E-value=0.00016  Score=50.26  Aligned_cols=36  Identities=22%  Similarity=0.489  Sum_probs=30.2

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCC-C
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAY-W  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~-W  269 (269)
                      ..+++|++||.+..       +..|+|++||+|.|++++|.+ |
T Consensus         7 ~~~~~alydy~~~~-------~~eLs~~~Gd~i~vl~~~~~~gW   43 (70)
T 2ct4_A            7 GGHCVAIYHFEGSS-------EGTISMAEGEDLSLMEEDKGDGW   43 (70)
T ss_dssp             SCEEEESSCBCCCS-------TTCCCBCTTCEEEEEECCSSSCE
T ss_pred             CCEEEEcccCCCCC-------CCcCCCCCCCEEEEEeccCCCCe
Confidence            34689999999876       457999999999999987655 6

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=97.39  E-value=8.8e-05  Score=50.00  Aligned_cols=34  Identities=24%  Similarity=0.530  Sum_probs=29.3

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|++||.+..       +..|+|++||++.|+++ +.+|
T Consensus         2 ~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~-~~~W   35 (60)
T 1i07_A            2 KYAKSKYDFVARN-------SSELSVMKDDVLEILDD-RRQW   35 (60)
T ss_dssp             CEEEESSCBCCSS-------TTBCCBCTTCEEEECGG-GCCE
T ss_pred             eEEEECccCCCCC-------CCcccCCCCCEEEEEEc-CCCe
Confidence            3689999999876       45799999999999999 6777

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.39  E-value=0.00013  Score=54.38  Aligned_cols=37  Identities=38%  Similarity=0.760  Sum_probs=32.4

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||.+..       +..|+|++||||.|+.+.|..|
T Consensus        33 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   69 (98)
T 1udl_A           33 PVCQVIAMYDYAANN-------EDELSFSKGQLINVMNKDDPDW   69 (98)
T ss_dssp             CSEEEEESSCCCCSS-------TTSCCCCTTCEEEECBCCSSSE
T ss_pred             CceEEEECCCCCCCC-------CCccCCcCCCEEEEEEecCCCE
Confidence            456789999999886       4579999999999999988888

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=97.39  E-value=0.0001  Score=50.94  Aligned_cols=37  Identities=30%  Similarity=0.451  Sum_probs=31.5

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....++|+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         9 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   45 (68)
T 1s1n_A            9 TGEEYIAVGDFTAQQ-------VGDLTFKKGEILLVIEKKPDGW   45 (68)
T ss_dssp             CCEEEEECSCBCCSS-------SSCCCBCSSEEEEECSCCSSSE
T ss_pred             CCCEEEEcccCCCCC-------CCcCCCCCCCEEEEEEcCCCCe
Confidence            345678999999876       4579999999999999988888

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=97.38  E-value=0.00013  Score=51.08  Aligned_cols=34  Identities=24%  Similarity=0.506  Sum_probs=28.2

Q ss_pred             ceeeeeecccCCCCCCCCCCCCC-ccccCCCCEEEEEeCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDA-GLSFNKGDILHVVSQDDA  267 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~-gL~F~~GDIL~vv~~~d~  267 (269)
                      .++.||+++|.+..       +. .|+|++||++.|++++|+
T Consensus         7 ~~~~~aly~y~a~~-------~~dELsf~~Gd~i~Vl~~~~~   41 (69)
T 1nm7_A            7 HHFARALYDFVPEN-------PEMEVALKKGDLMAILSKKDP   41 (69)
T ss_dssp             --CEEECSCCCCSS-------TTSCCCCCTTCEEEECCSSSS
T ss_pred             eeEEEEEecccCCC-------CCCccCCCCCCEEEEEecCCC
Confidence            36789999999987       55 899999999999998864

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.37  E-value=0.00015  Score=53.15  Aligned_cols=37  Identities=19%  Similarity=0.460  Sum_probs=31.9

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....++|+|||.+..       +..|+|++||||.|+.+.|..|
T Consensus        16 ~~~~~~alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W   52 (90)
T 2yup_A           16 EYGEAVAQYTFKGDL-------EVELSFRKGEHICLIRKVNENW   52 (90)
T ss_dssp             GSEEEEECSCCCCCS-------SSBCCCCTTCEEEESSCCCSSE
T ss_pred             cceEEEEeecCCcCC-------cCcCCCCCCCEEEEEEEcCCCe
Confidence            345789999999876       5579999999999999988888

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=97.37  E-value=9.3e-05  Score=51.40  Aligned_cols=37  Identities=24%  Similarity=0.340  Sum_probs=31.5

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||+++|+.+.+..|
T Consensus         6 ~~~~~~al~~y~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (70)
T 2cuc_A            6 SGNMFVALHTYSAHR-------PEELDLQKGEGIRVLGKYQDGW   42 (70)
T ss_dssp             SSCCEECCSCBCCCS-------TTBCCBCTTCEEEEEEEEETTE
T ss_pred             CCcEEEECeeECcCC-------CCcCCCCCCCEEEEEEecCCCe
Confidence            345789999999876       4579999999999999877777

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=97.37  E-value=0.00018  Score=49.79  Aligned_cols=36  Identities=19%  Similarity=0.560  Sum_probs=30.5

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||+++|++++ ..|
T Consensus         6 ~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~-~~W   41 (68)
T 1wxt_A            6 SGLKMQVLYEFEARN-------PRELTVVQGEKLEVLDHS-KRW   41 (68)
T ss_dssp             CCEEEEESSCBCCCS-------SSBCCBCTTCEEEEEECS-SSE
T ss_pred             CCeEEEECceECCCC-------cCcCCCCCCCEEEEEEcC-CCE
Confidence            456799999999886       557999999999999996 556

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=97.36  E-value=0.00013  Score=59.99  Aligned_cols=64  Identities=17%  Similarity=0.267  Sum_probs=44.8

Q ss_pred             CChHHHHHHHHcCCCeEEEEEEeCCCcCcccccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        194 KTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       194 ~~~~~~~~~l~~~~~~v~l~v~p~~~~~~~~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+..+++...+......+....|..     ++...+++|+|||.+..       +..|+|++|||+.|+++.|++|
T Consensus        90 ~sl~eLv~~y~~~~~~~~~L~~P~~-----~p~~~~~~alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W  153 (174)
T 3qwx_X           90 PDIPALLNHFKMRVLTEASLLAAYK-----KPIIEVVVGTFKFTGER-------ETDLPFEQGERLEILSKTNQDW  153 (174)
T ss_dssp             SSHHHHHHHTTSSCSSSCCCCEECC-----CCCSEEEEESSCBCCSS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CcHHHHhhhhhcCcccccccccccc-----cccccEEEEecCcccCC-------CCccccccCCEEEEEEccCCCe
Confidence            3555666666544332222223332     33566899999999986       5689999999999999999988

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=97.36  E-value=3.3e-05  Score=54.08  Aligned_cols=37  Identities=35%  Similarity=0.609  Sum_probs=32.0

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|+|.+..       +..|+|++|||+.|+.+.+..|
T Consensus         5 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   41 (71)
T 1hsq_A            5 FKCAVKALFDYKAQR-------EDELTFIKSAIIQNVEKQEGGW   41 (71)
T ss_dssp             SSSCCCCSSCCCCSS-------SSSCCCCTTCCCBSCCCBTTTE
T ss_pred             CCeEEEECCCCCcCC-------CCccCCCCCCEEEEEEecCCCE
Confidence            346789999999877       4579999999999999988888

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=97.36  E-value=0.00013  Score=51.03  Aligned_cols=37  Identities=30%  Similarity=0.529  Sum_probs=30.6

Q ss_pred             cceeeeeecccCC-CCCCCCCCCCCccccCCCCEEEEEeC-CCCCC
Q psy14174        226 SKIRVRAHFDYDA-SSDPYIPCKDAGLSFNKGDILHVVSQ-DDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p-~~D~~ipc~e~gL~F~~GDIL~vv~~-~d~~W  269 (269)
                      ...+++|+|+|.+ ..       +..|+|++|||+.|+.+ .+..|
T Consensus         6 ~~~~~~al~dy~a~~~-------~~eLs~~~Gd~i~v~~~~~~~gW   44 (72)
T 1spk_A            6 SGQKVKTIFPHTAGNN-------KTLLSFAQGDVLTLLIPEEKDGW   44 (72)
T ss_dssp             CSCEEECSSCBCCSSC-------SSBCCBCTTCEEEECCSSCBTTE
T ss_pred             CceEEEEeeeeCCCCC-------CCCCcCCCCCEEEEeEccCCCCc
Confidence            4568999999995 55       44799999999999987 77777

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=97.36  E-value=0.00011  Score=51.56  Aligned_cols=33  Identities=24%  Similarity=0.483  Sum_probs=28.4

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..||+++|.+ .       +..|+|++||++.|+++.+.+|
T Consensus         2 ~a~alydy~~-~-------~~eLs~~~Gd~i~v~~~~~~~W   34 (73)
T 2kxd_A            2 GAPPLPPYSA-G-------GREVTMKKGDILTLLNSTNKDW   34 (73)
T ss_dssp             CCCCCCSSCC-C-------SCCCCBCTTCEEEEEECCSSSE
T ss_pred             eEEEeeeeCC-C-------CCEeeEcCCCEEEEEEecCCCE
Confidence            5789999986 3       3469999999999999988888

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=97.35  E-value=5.1e-05  Score=52.56  Aligned_cols=37  Identities=32%  Similarity=0.570  Sum_probs=31.5

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+++|.+..       +..|+|++||++.|+.+.+..|
T Consensus         6 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   42 (68)
T 1wi7_A            6 SGRRCQVAFSYLPQN-------DDELELKVGDIIEVVGEVEEGW   42 (68)
T ss_dssp             CCCCEEESSCBCCSS-------TTBCCBCTTCEECCCEEEETTE
T ss_pred             CCCEEEECccCCcCC-------CCCccCcCCCEEEEEEcCCCCe
Confidence            346789999999876       5579999999999999877777

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.35  E-value=8.1e-05  Score=52.25  Aligned_cols=37  Identities=24%  Similarity=0.484  Sum_probs=30.8

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEe-CCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVS-QDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~-~~d~~W  269 (269)
                      ...++||+|+|.+..       +..|+|++|||+.|+. ..|..|
T Consensus         9 ~~~~~~alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~~W   46 (72)
T 1ugv_A            9 PFRKAKALYACKAEH-------DSELSFTAGTVFDNVHPSQEPGW   46 (72)
T ss_dssp             SCCCEEESSCBCCCS-------SSBCCBCTTCEEBSCCBCSSTTE
T ss_pred             CccEEEEccccCCcC-------CCEeCCcCCCEEEEEEecCCCCe
Confidence            345799999999887       4579999999999998 467777

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.34  E-value=0.00017  Score=50.85  Aligned_cols=38  Identities=29%  Similarity=0.551  Sum_probs=31.1

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....++||+++|.+..       +..|+|++||++.|+.++ ..|
T Consensus         7 ~~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~-~~W   44 (74)
T 1j3t_A            7 GVENLKAQALCSWTAKK-------DNHLNFSKHDIITVLEQQ-ENW   44 (74)
T ss_dssp             CCCCCEEEESSCBCCCS-------TTBCCBCTTCEEEEEEEC-SSE
T ss_pred             CCCCeEEEECCCCCCCC-------CCccCCCCCCEEEEEecC-CCE
Confidence            34457899999999876       446999999999999985 456

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=97.34  E-value=0.00011  Score=54.34  Aligned_cols=39  Identities=28%  Similarity=0.560  Sum_probs=33.2

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....+++|+|+|.+..       +..|+|++|||+.|+.+.+..|
T Consensus        15 ~~~~~~~~Alydy~a~~-------~~eLsf~~Gd~i~V~~~~~~gW   53 (92)
T 2o2o_A           15 ERRRRRCQVAFSYLPQN-------DDELELKVGDIIEVVGEVEEGW   53 (92)
T ss_dssp             SCSSCEEEECSCBCCCS-------SSCCCBCSSCEEECCCGGGSSC
T ss_pred             CCCCeEEEEccccCCCC-------CccccccCCCEEEEeEecCCCE
Confidence            34456899999999876       4579999999999999888888

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.34  E-value=0.00014  Score=52.05  Aligned_cols=36  Identities=22%  Similarity=0.375  Sum_probs=29.8

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||.+..       +..|+|++||+|.|++. |..|
T Consensus        16 ~~~~~~Alydy~a~~-------~~eLs~~~Gd~i~v~~~-~~~W   51 (79)
T 2cud_A           16 DSDFLAVLSDYPSPD-------ISPPIFRRGEKLRVISD-EGGW   51 (79)
T ss_dssp             CCCEEEESSCSSCTT-------TSCCSSCTTCEEEEEEE-ETTE
T ss_pred             CCeEEEEccCCCCCC-------CCcCCCCCCCEEEEEec-CCCe
Confidence            345799999999876       45799999999999994 5667

>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A

Probab=97.34  E-value=8.8e-05  Score=70.09  Aligned_cols=58  Identities=19%  Similarity=0.344  Sum_probs=50.0

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .+++|..|.+||||+++| |+.||+|++|||..+.+.  .++..++..  .+..+.++|.+..
T Consensus       286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g  345 (448)
T 1ky9_A          286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDG  345 (448)
T ss_dssp             CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSS
T ss_pred             CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECC
Confidence            489999999999999999 699999999999999654  577877764  5788999998764

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=97.34  E-value=5e-05  Score=54.68  Aligned_cols=39  Identities=31%  Similarity=0.612  Sum_probs=33.2

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....+++|+|||.+..       +..|+|++|||+.|+.+.|..|
T Consensus        15 ~~~~~~~~Alydy~a~~-------~~eLsf~~Gd~I~Vl~~~~~gW   53 (79)
T 1z9q_A           15 RMAAPRAEALFDFTGNS-------KLELNFKAGDVIFLLSRINKDW   53 (79)
T ss_dssp             CSSCCCEEESSCCCCSS-------TTBCCCCTTCCBCCCEESSSSE
T ss_pred             CCCceEEEEcCccCCCC-------CCcccccCCCEEEEeEecCCCE
Confidence            34456799999999876       4579999999999999988888

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=97.33  E-value=0.0002  Score=48.52  Aligned_cols=36  Identities=33%  Similarity=0.528  Sum_probs=29.6

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEe-CCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVS-QDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~-~~d~~W  269 (269)
                      ..+++|++||.+..       +..|+|++||++.|+. ..|..|
T Consensus         5 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~W   41 (63)
T 3eg3_A            5 PNLFVALYDFVASG-------DNTLSITKGEKLRVLGYNHNGEW   41 (63)
T ss_dssp             TTEEEESSCBCCCS-------SSBCCBCTTCEEEEEEECTTSSE
T ss_pred             CEEEEEcceECCCC-------CCccCCCCCCEEEEEEeCCCCCe
Confidence            45789999999876       5579999999999998 455656

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.33  E-value=0.00014  Score=53.71  Aligned_cols=36  Identities=31%  Similarity=0.617  Sum_probs=30.6

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC--CCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~--d~~W  269 (269)
                      ..++||+|||.+..       +..|+|++||||.|+.+.  |..|
T Consensus         5 ~~~~~Alydy~a~~-------~~eLsf~~Gd~i~v~~~~~~~~gW   42 (93)
T 1uff_A            5 SSGYRALYPFEARN-------HDEMSFNSGDIIQVDEKTVGEPGW   42 (93)
T ss_dssp             CCCEEESSCBCCCS-------SSCCCBCTTCEEEECSSCCCSSSE
T ss_pred             CEEEEECccCCCCC-------CCCcCCCCCCEEEEeEccCCCCCE
Confidence            45789999999886       457999999999999985  6777

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=97.32  E-value=0.00013  Score=52.13  Aligned_cols=37  Identities=22%  Similarity=0.431  Sum_probs=31.2

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCC-ccccCCCCEEEEEeCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDA-GLSFNKGDILHVVSQDDA  267 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~-gL~F~~GDIL~vv~~~d~  267 (269)
                      .....+++|+|||.+..       +. .|+|++||+|.|+++.|.
T Consensus        11 ~~~~~~~~alydy~~~~-------~~~eLs~~~Gd~i~v~~~~~~   48 (80)
T 2v1r_A           11 PSKLEFARALYDFVPEN-------PEMEVALKKGDLMAILSKKDP   48 (80)
T ss_dssp             GGGCEEEEESSCBCCSS-------TTTBCCBCTTCEEEEEEEECT
T ss_pred             CCcCEEEEECccCCCCC-------CCCEecCCCCCEEEEEECCCC
Confidence            34557899999999887       44 799999999999998875

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.32  E-value=0.00019  Score=50.79  Aligned_cols=36  Identities=22%  Similarity=0.595  Sum_probs=30.9

Q ss_pred             ceeeeeecccCCC-CCCCCCCCCCccccCCCCEEEEEeCC-CCCC
Q psy14174        227 KIRVRAHFDYDAS-SDPYIPCKDAGLSFNKGDILHVVSQD-DAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~-~D~~ipc~e~gL~F~~GDIL~vv~~~-d~~W  269 (269)
                      ..++||+++|.+. .       +..|+|++||+|.|+.++ +..|
T Consensus         9 ~~~~~al~dy~~~~~-------~~eLs~~~Gd~i~v~~~~~~~gW   46 (77)
T 2enm_A            9 ATKARVMYDFAAEPG-------NNELTVTEGEIITVTNPNVGGGW   46 (77)
T ss_dssp             CEEEEESSCCCCCTT-------SSBCCCCTTCEEEEEESCCSSSE
T ss_pred             CcEEEECccCCCCCC-------CCeecCCCCCEEEEeEccCCCCe
Confidence            4689999999987 4       557999999999999986 6777

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.31  E-value=0.00018  Score=49.75  Aligned_cols=36  Identities=28%  Similarity=0.485  Sum_probs=30.2

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|+|.+..       +..|+|++||+|.|++++ .+|
T Consensus         6 ~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~-~~W   41 (68)
T 1wxb_A            6 SGKYVKILYDFTARN-------ANELSVLKDEVLEVLEDG-RQW   41 (68)
T ss_dssp             SCCCEECSSCBCCSS-------SSBCCBCTTCEEEEEECS-SSE
T ss_pred             CCEEEEECccCCCCC-------CCccCCCCCCEEEEEEcC-CCE
Confidence            345789999999886       557999999999999986 556

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=97.31  E-value=4.6e-05  Score=54.23  Aligned_cols=37  Identities=16%  Similarity=0.363  Sum_probs=32.1

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||.+..       +..|+|++||+|.|++++|.+|
T Consensus        19 ~~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   55 (77)
T 1awj_A           19 EETLVIALYDYQTND-------PQELALRCDEEYYLLDSSEIHW   55 (77)
T ss_dssp             SSSCCCCCCCBCCCC-------TTSCCBCSSSCCSCCCTTSSSB
T ss_pred             CceEEEECccCCCCC-------cCCcCCCCCCEEEEEEecCCCC
Confidence            346799999999876       4579999999999999998888

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=97.31  E-value=0.00019  Score=52.67  Aligned_cols=37  Identities=41%  Similarity=0.677  Sum_probs=31.6

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC-----CCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD-----DAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~-----d~~W  269 (269)
                      ...+++|++||.+..       +..|+|++||+|.|+.++     +..|
T Consensus        28 ~~~~~~Alydy~a~~-------~~ELsf~~GD~I~Vl~~~~~~~~~~gW   69 (89)
T 2rf0_A           28 AGPVWTAVFDYEAAG-------DEELTLRRGDRVQVLSQDCAVSGDEGW   69 (89)
T ss_dssp             CCCEEEECSCBCCSS-------TTBCCBCTTCEEEEEECCHHHHSSTTE
T ss_pred             CCcEEEECCccCCCC-------CCccccCCCCEEEEEeccCCcccCCCE
Confidence            456889999999987       457999999999999985     6777

>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}

Probab=97.30  E-value=0.00094  Score=64.45  Aligned_cols=59  Identities=15%  Similarity=0.192  Sum_probs=46.5

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCC--------hHHHHHHHH--cCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT--------PGDVLKILQ--SSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~--------~~~~~~~l~--~~~~~v~l~v~p~~  218 (269)
                      .|++|.+|.+||||++ + |+.||.|++|||+.+....        ...+..++.  ..|.++.++|.|.+
T Consensus       277 ~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~G  345 (539)
T 4fln_A          277 EGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAG  345 (539)
T ss_dssp             BCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETT
T ss_pred             CceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECC
Confidence            5899999999999987 4 7999999999999996532        112334443  46899999999975

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.30  E-value=0.00022  Score=51.03  Aligned_cols=36  Identities=19%  Similarity=0.383  Sum_probs=31.2

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++|+|+|.+..       +..|+|++|||+.|+.+++..|
T Consensus         8 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~vl~~~~~gW   43 (80)
T 2ekh_A            8 ATSYMTCSAYQKVQ-------DSEISFPAGVEVQVLEKQESGW   43 (80)
T ss_dssp             CEEEEECSCBCCSS-------TTSCCBCTTCEEEEEEECTTSE
T ss_pred             CCEEEECCCCCCCC-------CCccCcCCCCEEEEEEeCCCCe
Confidence            45689999999876       4579999999999999988888

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.29  E-value=0.00015  Score=50.45  Aligned_cols=36  Identities=17%  Similarity=0.458  Sum_probs=31.2

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++|++||.+..       +..|+|++||++.|+.+++..|
T Consensus         8 ~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   43 (70)
T 2ega_A            8 LEQYVVVSNYKKQE-------NSELSLQAGEVVDVIEKNESGW   43 (70)
T ss_dssp             CBCEECCSCCCCCS-------SSSCCCCTTCBCEEEEECTTSE
T ss_pred             CcEEEECceECCCC-------CCcccCCCCCEEEEEEccCCCe
Confidence            34689999999876       5579999999999999988888

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.28  E-value=0.00025  Score=50.82  Aligned_cols=39  Identities=28%  Similarity=0.545  Sum_probs=32.0

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC--CCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~--d~~W  269 (269)
                      .....++||+|||.+..       +..|+|++|||+.|+.++  |..|
T Consensus        14 ~~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~~W   54 (81)
T 1x43_A           14 SSNNRKARVLYDYDAAN-------STELSLLADEVITVFSVVGMDSDW   54 (81)
T ss_dssp             CCCCEEEEESSCCCCSS-------TTBCCCCTTCEEEEECCTTCCTTE
T ss_pred             CCCCeEEEEcccCCCCC-------CCcCCCCCCCEEEEEEcCCCCCCc
Confidence            34456799999999877       457999999999999984  5777

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.27  E-value=0.00016  Score=50.26  Aligned_cols=36  Identities=22%  Similarity=0.468  Sum_probs=29.9

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....++|+++|.+..       +..|+|++||++.|+.+ |..|
T Consensus         7 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~-~~~W   42 (69)
T 1uhf_A            7 GGEEYIALYPYSSVE-------PGDLTFTEGEEILVTQK-DGEW   42 (69)
T ss_dssp             CSEEEECSSCBCCSS-------SSBCCBCTTCEEEECEE-ETTE
T ss_pred             CCCEEEEeeeECCCC-------cCccCCCCCCEEEEEEe-CCCE
Confidence            345789999999876       45799999999999998 5666

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=97.26  E-value=0.00027  Score=54.44  Aligned_cols=39  Identities=28%  Similarity=0.576  Sum_probs=32.6

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEe-----CCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVS-----QDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~-----~~d~~W  269 (269)
                      .....++||+|||.+..       +..|+|++||||.|+.     +.+..|
T Consensus        41 ~~~~~~~~Alydy~a~~-------~dELsf~~GDiI~Vl~~~~~~~~~~gW   84 (115)
T 1bb9_A           41 PGFMFKVQAQHDYTATD-------TDELQLKAGDVVLVIPFQNPEEQDEGW   84 (115)
T ss_dssp             TTCCEEEEESSCBCCSS-------TTBCCBCTTCEEEEECCSCGGGCCTTE
T ss_pred             CCcceEEEECCccCCCC-------CCccCcCCCCEEEEeeccCCcccCCCe
Confidence            33456799999999977       4579999999999999     778888

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=97.23  E-value=0.00019  Score=52.64  Aligned_cols=37  Identities=22%  Similarity=0.431  Sum_probs=31.1

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCC-ccccCCCCEEEEEeCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDA-GLSFNKGDILHVVSQDDA  267 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~-gL~F~~GDIL~vv~~~d~  267 (269)
                      .....+++|+|||.+..       +. .|+|++||+|.|+++.|.
T Consensus        11 ~~~~~~~~alydy~~~~-------~~~eLsf~~Gd~i~v~~~~~~   48 (92)
T 1jqq_A           11 PSKLEFARALYDFVPEN-------PEMEVALKKGDLMAILSKKDP   48 (92)
T ss_dssp             STTCEEEEESSBBCCSS-------TTTBCCBCTTCEEEEEEEECT
T ss_pred             CCcCEEEEECccCCCCC-------CCCCcCCCCCCEEEEEECCCC
Confidence            34556899999999887       44 799999999999998875

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=97.23  E-value=0.00026  Score=49.19  Aligned_cols=37  Identities=30%  Similarity=0.609  Sum_probs=29.4

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .++++|+++|.+..+.     ...|+|++||++.|+++ |..|
T Consensus         5 ~~~~~alydy~~~~~~-----~~eLsf~~Gd~i~v~~~-~~~W   41 (70)
T 2vkn_A            5 IYKAKALYPYDADDDD-----AYEISFEQNEILQVSDI-EGRW   41 (70)
T ss_dssp             EEEEEESSCBCCCSSS-----TTBCCBCTTCEEEEECT-TSSE
T ss_pred             CEEEEECccCCCCCCC-----CCcccCCCCCEEEEEEc-CCCe
Confidence            4678999999987632     13799999999999987 5566

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.22  E-value=0.00019  Score=51.19  Aligned_cols=38  Identities=16%  Similarity=0.322  Sum_probs=31.8

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .....+++|+++|.+..       +..|+|++|||+.|+.+ +..|
T Consensus        14 ~~~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~-~~gW   51 (79)
T 1x6b_A           14 KGDLPQVEITKAFFAKQ-------ADEVTLQQADVVLVLQQ-EDGW   51 (79)
T ss_dssp             CSSCCEEEESSCCCCCS-------SSBCCCCTTEEEEEEEE-ETTE
T ss_pred             CCCCCEEEECeeECCCC-------cCCcCCCCCCEEEEEEe-CCCE
Confidence            34456799999999876       45799999999999998 7777

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=97.20  E-value=0.00026  Score=51.17  Aligned_cols=36  Identities=39%  Similarity=0.666  Sum_probs=30.7

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|++||.+..       +..|+|++||+|.|+.++| .|
T Consensus        24 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~~-~W   59 (86)
T 2oi3_A           24 EDIIVVALYDYEAIH-------HEDLSFQKGDQMVVLEESG-EW   59 (86)
T ss_dssp             TSEEEEESSCCCCSS-------SSCCCCCTTCEEEEEEESS-SE
T ss_pred             CCcEEEECccCCCCC-------CCcCcCCCCCEEEEEEcCC-Ce
Confidence            446899999999876       4479999999999999885 67

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=97.16  E-value=0.00025  Score=52.24  Aligned_cols=38  Identities=32%  Similarity=0.679  Sum_probs=32.2

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC----CCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD----AYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d----~~W  269 (269)
                      ....+++|+|||.+..       +..|+|++||||+|+.+++    ..|
T Consensus        15 ~~~~~~~alydy~a~~-------~~eLsf~~Gd~i~v~~~~~~~~~~gW   56 (93)
T 1wxu_A           15 DDHVVARAEYDFVAVS-------DEEISFRAGDMLNLALKEQQPKVRGW   56 (93)
T ss_dssp             SCBBCEEESSCBCCSS-------SSBCCBCSSCBCEECCTTTSCSCSSC
T ss_pred             CCCEEEEECccCCCCC-------CCccCcCCCCEEEEEECCCCCCCCCc
Confidence            4467899999999877       4579999999999999887    577

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.14  E-value=0.00032  Score=49.58  Aligned_cols=35  Identities=20%  Similarity=0.384  Sum_probs=29.4

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|+|||.+. +       ..|+|++||||.|+++++..|
T Consensus        10 ~~~~~alydy~~~-~-------~eLs~~~Gd~i~vl~~~~~gW   44 (75)
T 2egc_A           10 KDVYVSIADYEGD-E-------ETAGFQEGVSMEVLERNPNGW   44 (75)
T ss_dssp             CEEEEECSCBCCC-S-------SSCCBCTTCEEEECEECTTSE
T ss_pred             CeEEEECCCcCCC-C-------CcCCCCCCCEEEEEEcCCCCe
Confidence            4568999999875 2       258999999999999988878

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=97.12  E-value=0.00035  Score=50.74  Aligned_cols=35  Identities=29%  Similarity=0.565  Sum_probs=29.8

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|+|||.+..       +..|+|++||++.|++++ ..|
T Consensus        31 ~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~-~~W   65 (86)
T 2jxb_A           31 EVIVIAKWDYTAQQ-------DQELDIKKNERLWLLDDS-KTW   65 (86)
T ss_dssp             CEEEEESSCCCCCS-------SSBCCCCTTEEEEEEECC-SSE
T ss_pred             ceEEEECccCCCCC-------CCEeccCCCCEEEEEecC-CCe
Confidence            46799999999877       457999999999999984 566

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=97.10  E-value=0.00033  Score=49.11  Aligned_cols=36  Identities=28%  Similarity=0.494  Sum_probs=30.4

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|+|.+..       +..|+|++||++.|+.++ +.|
T Consensus        10 ~~~~~~al~dy~~~~-------~~eLs~~~Gd~i~v~~~~-~~W   45 (74)
T 2m0y_A           10 EEKYGVAFYNYDARG-------ADELSLQIGDTVHILETY-EGW   45 (74)
T ss_dssp             CCSCEEECSEECCCS-------SSBCCEETTEEEEEEEBS-SSC
T ss_pred             CCeEEEEceeeCCCC-------cCcccCCCCCEEEEEEcC-CCe
Confidence            356899999999876       557999999999999986 457

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=97.08  E-value=0.0004  Score=53.78  Aligned_cols=36  Identities=19%  Similarity=0.404  Sum_probs=30.8

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|+|++..       +..|+|++||||.|+.++| .|
T Consensus        58 ~~~~~~Alydy~a~~-------~~eLsf~~Gd~i~vl~~~~-gW   93 (119)
T 2rqr_A           58 KERHGVAIYNFQGSG-------APQLSLQIGDVVRIQETCG-DW   93 (119)
T ss_dssp             CCEEEEBCSCBCCCS-------TTBCCBCTTCEEEEEEEET-TE
T ss_pred             CceEEEEccccCCCC-------CCcccCcCCCEEEEEEcCC-CE
Confidence            456899999999877       5579999999999999875 67

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.07  E-value=0.00049  Score=50.71  Aligned_cols=37  Identities=16%  Similarity=0.416  Sum_probs=30.7

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC--CC--CCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ--DD--AYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~--~d--~~W  269 (269)
                      ...+++|+|+|.+..       +..|+|++||||.|+.+  .|  ..|
T Consensus        15 ~~~~~~Alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~~~gW   55 (94)
T 2e5k_A           15 NHETLQVIYPYTPQN-------DDELELVPGDFIFMSPMEQTSTSEGW   55 (94)
T ss_dssp             CCEEEEECSCBCCSS-------SSBCCBCTTCEEEECGGGCCSTTTTE
T ss_pred             CCeEEEECCcCCCCC-------CCCcCCCCCCEEEEEECcCCCCCCCc
Confidence            456899999999877       55799999999999987  34  667

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=96.99  E-value=0.00055  Score=49.95  Aligned_cols=34  Identities=41%  Similarity=0.630  Sum_probs=28.9

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+++|+|||.+..       +..|+|++||++.|++++ ..|
T Consensus         4 ~~~~Alydy~~~~-------~~eLs~~~Gd~i~v~~~~-~~W   37 (90)
T 3reb_B            4 IIVVALYDYVSWS-------PDDLSFQKGDQMVVLEES-GEW   37 (90)
T ss_dssp             CEEEESSCBCCSS-------TTBCCBCTTCEEEEEECS-SSE
T ss_pred             EEEEECCccCcCC-------cCcCCCCCCCEEEEEEeC-CCE
Confidence            5789999999876       457999999999999985 457

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=96.85  E-value=0.0013  Score=46.64  Aligned_cols=40  Identities=15%  Similarity=0.326  Sum_probs=28.5

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC-CCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD-DAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~-d~~W  269 (269)
                      +...++++++|.+....   + +..|+|++|||++|++++ |..|
T Consensus        14 ~~~~~~a~~~~~~~~~~---~-~~eLsf~~Gd~i~v~~~~~~~gW   54 (78)
T 1k1z_A           14 KMEVFQEYYGIPPPPGA---F-GGFLRLNPGDIVELTKAEAEHNW   54 (78)
T ss_dssp             CEEECSCBSSCSCCSSS---S-CCCCCBCTTCEEEEEECCSSCSC
T ss_pred             cEEEEEECCCCCCCCCC---C-CCccCCCCCCEEEEEEcCCCCCe
Confidence            44556677777664311   1 347999999999999995 7888

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=96.79  E-value=0.00074  Score=51.41  Aligned_cols=31  Identities=26%  Similarity=0.238  Sum_probs=27.3

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ  264 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~  264 (269)
                      ..+++|++||.+..       +..|+|++|||+.|+++
T Consensus        22 ~~~~~Alydy~a~~-------~~ELsf~~GDiI~Vl~k   52 (108)
T 1i1j_A           22 ISMAVALQDYMAPD-------CRFLTIHRGQVVYVFSK   52 (108)
T ss_dssp             SEEEEESSCBCCSS-------TTBCCBCTTCEEEEEEE
T ss_pred             eeEEEECCccCCCC-------CCccccCCCCEEEEEEe
Confidence            45799999999887       55799999999999998

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=96.76  E-value=0.0011  Score=59.42  Aligned_cols=64  Identities=17%  Similarity=0.267  Sum_probs=45.1

Q ss_pred             CChHHHHHHHHcCCCeEEEEEEeCCCcCcccccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        194 KTPGDVLKILQSSEGTITFKLIPADNKLGYRESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       194 ~~~~~~~~~l~~~~~~v~l~v~p~~~~~~~~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+..+++...+......+....|..     ++...+++|+|||++..       +..|+|++|||+.|+++.|.+|
T Consensus       119 ~Sl~eLv~~y~~~~~~~~~L~~P~~-----~p~~~~~~al~dy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W  182 (308)
T 3qwy_A          119 PDIPALLNHFKMRVLTEASLLAAYK-----KPIIEVVVGTFKFTGER-------ETDLPFEQGERLEILSKTNQDW  182 (308)
T ss_dssp             SSHHHHHHHHHHSCSSSCCCCEECC-----CCCCEEEEESSCBCCSS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CCHHHHHHHHhhcccccchhccccc-----cccceeEEEeceEcCCC-------CCcCcCCCCCEEEEEEcCCCCe
Confidence            3556777666554432222233322     23456899999999886       4579999999999999999988

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=96.76  E-value=0.001  Score=56.07  Aligned_cols=38  Identities=37%  Similarity=0.797  Sum_probs=33.5

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|+|||.+..       +..|+|++|||+.|+.+.|+.|
T Consensus       156 ~~~~~~~al~~y~~~~-------~~eL~~~~Gd~i~v~~~~~~~W  193 (217)
T 1gri_A          156 QQPTYVQALFDFDPQE-------DGELGFRRGDFIHVMDNSDPNW  193 (217)
T ss_dssp             CCCCEEEESSCCCCSS-------TTBCCCCTTCEEEEEECCSSSE
T ss_pred             CCceEEEecCCccCCC-------CCcCCCCCCCEEEEEEeCCCCe
Confidence            4567899999999877       4589999999999999999888

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=96.74  E-value=0.00043  Score=49.78  Aligned_cols=32  Identities=28%  Similarity=0.503  Sum_probs=27.0

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ  264 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~  264 (269)
                      ....+||+|+|.+..       +..|+|++||++.|+++
T Consensus         4 ~~~~~~Alydy~~~~-------~~eLs~~~Gd~I~V~~~   35 (83)
T 3i5r_A            4 EGYQYRALYDYKKER-------EEDIDLHLGDILTVNKG   35 (83)
T ss_dssp             EEEEEEECSCBCCCS-------TTBCCBCTTCEEEEEHH
T ss_pred             CCcEEEEccccCCCC-------CCccccCCCCEEEEeec
Confidence            346789999999876       55799999999999964

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=96.67  E-value=0.0013  Score=56.06  Aligned_cols=37  Identities=30%  Similarity=0.622  Sum_probs=31.8

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEe-----CCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVS-----QDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~-----~~d~~W  269 (269)
                      ...++||+|+|.+..       +..|+|++||||.|+.     +.|..|
T Consensus       141 ~~~~~rALYdY~a~~-------~dELSf~~GDiI~Vl~~~~~~~~ddgW  182 (213)
T 1mv3_A          141 FMFKVQAQHDYTATD-------TDELQLKAGDVVLVIPFQNPEEQDEGW  182 (213)
T ss_dssp             CCEEEEESSCBCCCS-------TTCCCBCSSCEEEECCCSCGGGSCTTE
T ss_pred             cceEEEECCCcCCCC-------CCcCCcCCCCEEEEeecCCCCccCCCe
Confidence            346799999999987       4579999999999999     777888

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=96.25  E-value=0.00095  Score=57.29  Aligned_cols=37  Identities=35%  Similarity=0.725  Sum_probs=32.4

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||.+..       +..|+|++|||+.|++++|..|
T Consensus       135 ~~~~~~al~dy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W  171 (230)
T 2dvj_A          135 EAEYVRALFDFNGND-------EEDLPFKKGDILRIRDKPEEQW  171 (230)
T ss_dssp             CCCCCBCCSCCCCSS-------SSSCCCCSSCBCCCCBCSCSSE
T ss_pred             cceeEEEeeeecCCC-------CCCccCcCCCEEEEEEccCCCc
Confidence            346799999999876       4579999999999999999888

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=96.21  E-value=0.0024  Score=46.65  Aligned_cols=32  Identities=22%  Similarity=0.360  Sum_probs=27.1

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEe
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVS  263 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~  263 (269)
                      .....+||+|+|.+..       +..|+|++|||+.|++
T Consensus         9 ~~~~~~~Alydy~a~~-------~~ELsf~~GD~I~V~~   40 (90)
T 3o5z_A            9 PEGFQYRALYPFRRER-------PEDLELLPGDVLVVSR   40 (90)
T ss_dssp             CSEEEEEECSCBCCCS-------TTBCCBCTTCEEEEEH
T ss_pred             CCCcEEEEeeeECCCC-------CCccCCcCCCEEEEEe
Confidence            3456789999999976       5579999999999994

>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}

Probab=96.16  E-value=0.013  Score=56.44  Aligned_cols=54  Identities=11%  Similarity=0.226  Sum_probs=46.6

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC-eEEEEE
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG-TITFKL  214 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~-~v~l~v  214 (269)
                      .+++|+.|.++++|...| ++.||+|++|||++|.  +..++.++++++.+ -+.|.+
T Consensus       415 ~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~--s~~~l~~~l~~~k~~~l~~~~  469 (539)
T 4fln_A          415 QIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIR--NIHHLAHLIDMCKDKYLVFEF  469 (539)
T ss_dssp             CCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECC--SHHHHHHHHHTCCSSEEEEEE
T ss_pred             eEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcC--CHHHHHHHHHHcCCCeEEEEE
Confidence            489999999999999999 5999999999999994  67799999988754 456664

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=96.16  E-value=0.0038  Score=55.76  Aligned_cols=37  Identities=35%  Similarity=0.725  Sum_probs=32.6

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++||+|+|.+..       +..|+|++|||+.|+++.|.+|
T Consensus       133 ~~~~~~alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W  169 (304)
T 2eyz_A          133 EAEYVRALFDFNGND-------EEDLPFKKGDILRIRDKPEEQW  169 (304)
T ss_dssp             CCCEEEECSCCCCSC-------SSSCCCCTTCEEEEEECCSSSE
T ss_pred             cceeEEEEeeecCCC-------CCcCcccCCCEEEEEEecCCCc
Confidence            456899999999887       4479999999999999999888

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=96.13  E-value=0.0033  Score=45.31  Aligned_cols=33  Identities=18%  Similarity=0.386  Sum_probs=27.8

Q ss_pred             eeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC--CCCC
Q psy14174        230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD--DAYW  269 (269)
Q Consensus       230 vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~--d~~W  269 (269)
                      +.+++||....       ...|+|++||+|+|+++.  |++|
T Consensus        20 ~valydF~Ar~-------~~ELS~~kGd~vevle~~~~~peW   54 (82)
T 1u3o_A           20 TVVLQDFSAAH-------SSELSIQVGQTVELLERPSERPGW   54 (82)
T ss_dssp             EECSSCBCCCS-------TTCCCBCTTCEEEESSCTTSSTTE
T ss_pred             EEEEeeecCCC-------CCeeeEcCCCEEEEEecCCCCCCE
Confidence            57888998776       567999999999999876  5888

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=95.96  E-value=0.0076  Score=41.45  Aligned_cols=21  Identities=29%  Similarity=0.599  Sum_probs=18.6

Q ss_pred             CccccCCCCEEEEEeC-CCCCC
Q psy14174        249 AGLSFNKGDILHVVSQ-DDAYW  269 (269)
Q Consensus       249 ~gL~F~~GDIL~vv~~-~d~~W  269 (269)
                      ..|+|++|||++|+++ .|..|
T Consensus        25 ~eLsf~~Gd~i~v~~~~~~~~W   46 (70)
T 1gcq_C           25 PFLRLNPGDIVELTKAEAEHNW   46 (70)
T ss_dssp             CBCCBCTTCEEEEEECCTTCSE
T ss_pred             CcCCcCCCCEEEEEeCCCCCCC
Confidence            4799999999999998 67777

>1vf6_A PALS-1, PALS1-associated tight junction protein; L27 domain, heterodimer, four-helical bundle, coiled-coil, hydrophobic packing interactions; 2.10A {Homo sapiens} SCOP: a.194.1.1

Probab=95.91  E-value=0.0038  Score=44.45  Aligned_cols=46  Identities=20%  Similarity=0.321  Sum_probs=37.3

Q ss_pred             HHHHHHHHHhhccc-----ccChhhHHHHHHHhcChhHHHHHhhhhccccc
Q psy14174         14 SSLLETLQESQSTF-----SANDEELLFLSSLLQSKELNALVHVHNSIVNE   59 (269)
Q Consensus        14 ~~vL~~L~~~~~~~-----~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~~   59 (269)
                      +++|..|++++.+.     .+.++++..|+.+|+||-|+.++.++.++.+.
T Consensus         3 ~rvLq~leRLQ~KL~erGd~s~~ekLs~lk~~LqSPLF~qILtlQqSikqL   53 (83)
T 1vf6_A            3 LQVLQVLDRLKMKLQEKGDTSQNEKLSMFYETLKSPLFNQILTLQQSIKQL   53 (83)
T ss_dssp             --CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHccccchHhHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            46777888776664     55678999999999999999999999988764

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=95.83  E-value=0.0051  Score=58.78  Aligned_cols=37  Identities=30%  Similarity=0.672  Sum_probs=31.0

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||++..       +..|+|++|||+.|++++|.+|
T Consensus        84 ~~~~~~alyd~~~~~-------~~el~~~~gd~i~v~~~~~~~w  120 (535)
T 2h8h_A           84 GVTTFVALYDYESRT-------ETDLSFKKGERLQIVNNTEGDW  120 (535)
T ss_dssp             ---CEEESSCBCCCS-------SSBCCBCTTCEEEEEECSSSSE
T ss_pred             CCcEEEEccccCCcC-------CCcCCcCCCCEEEEEEecCCCc
Confidence            345789999999987       5579999999999999998888

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=95.80  E-value=0.007  Score=50.40  Aligned_cols=36  Identities=19%  Similarity=0.204  Sum_probs=30.9

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++|+++|++..       +..|+|++||++.|+++.+..|
T Consensus        81 ~~~~~al~dy~a~~-------~~eLs~~~Gd~i~vl~~~~~gW  116 (193)
T 1ng2_A           81 GEPYVAIKAYTAVE-------GDEVSLLEGEAVEVIHKLLDGW  116 (193)
T ss_dssp             CEEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCTTSE
T ss_pred             ceeeeeccccCCCC-------CCcccccCCCEEEEEEecCCCe
Confidence            35678999999887       4579999999999999988888

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=95.64  E-value=0.0069  Score=54.94  Aligned_cols=36  Identities=31%  Similarity=0.627  Sum_probs=31.7

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|+|||.+..       +..|+|++|||+.|+++.|.+|
T Consensus       174 ~~~~~alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W  209 (341)
T 2dyb_A          174 APRAEALFDFTGNS-------KLELNFKAGDVIFLLSRINKDW  209 (341)
T ss_dssp             CCEEEESSCBCCSS-------SSBCCBCTTCEEEEEEECSSSE
T ss_pred             CcEEEEEEeeCCCC-------CCcCCccCCCEEEEEEecCCCE
Confidence            34689999999887       4579999999999999988888

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=95.62  E-value=0.0083  Score=56.37  Aligned_cols=37  Identities=27%  Similarity=0.513  Sum_probs=32.7

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||.+..       +..|+|++|||+.|+++.|++|
T Consensus        29 ~~~~~~al~~~~~~~-------~~eL~~~~gd~i~v~~~~~~~W   65 (466)
T 2pz1_A           29 SVVCAEALWDHVTMD-------DQELGFKAGDVIEVMDATNREW   65 (466)
T ss_dssp             CCEEEEESSCBCCCC-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CccEEEEccccCCCC-------CCcCCCCCCCEEEEEEecCCCE
Confidence            357899999999876       5579999999999999999888

>3lra_A Disks large homolog 1, maguk P55 subfamily member protein LIN-7 homolog C; tripartite complex, L27 tetramer, cell junction; 2.95A {Homo sapiens} PDB: 1rso_A

Probab=95.50  E-value=0.059  Score=46.79  Aligned_cols=101  Identities=20%  Similarity=0.245  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHhhcccccC-hhh----HHHHHHHhcChhHHHHHhhhhccccc----cCCCccCchH---HhHHHHHHH--
Q psy14174         13 VSSLLETLQESQSTFSAN-DEE----LLFLSSLLQSKELNALVHVHNSIVNE----QSHPVLSNAM---QISLEVLDV--   78 (269)
Q Consensus        13 ~~~vL~~L~~~~~~~~~~-~~d----~~~l~~~l~~~~~~~l~~~~~~~~~~----~~~p~~~~~~---~~~~~v~~~--   78 (269)
                      -.+.|.-|++-++..... ++.    +.=+-++|+|.-|++|+.+|+-.+..    ...|+...+.   .-..+|++.  
T Consensus         7 ~~ral~~l~~y~~~l~~~~d~~l~~~~~~~i~~f~s~lf~~lldi~e~ye~tl~~~~~~~~~~~~~~~~~gv~qVLdsL~   86 (254)
T 3lra_A            7 TQRALHLLEEYRSKLSQTEDRQLRSSIERVINIFQSNLFQALIDIQEFYEVTLLDNPKLEVLFQGPGSDTGLYELLAALP   86 (254)
T ss_dssp             HHHHHHHHHHHHHTCCSSSCTTHHHHHHHHHHHHHSHHHHHHHHHHHHTTCCTTTCGGGGGGGSSTTSSSSHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcccccCCCccchHHHHHHHHH
Confidence            456778888876654332 223    77788999999999999999866643    3344432111   123334443  


Q ss_pred             --HhhccCCChhHHHHHHhccCchhhhhhhhcccccc
Q psy14174         79 --LLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQ  113 (269)
Q Consensus        79 --l~~~~~~~~~~~el~~ll~~p~~~~ll~a~d~v~~  113 (269)
                        +........+..=|..+|.+|.+++++.+||.+..
T Consensus        87 e~L~~~~~~d~Dl~FLk~lL~sp~L~sLlkihd~L~~  123 (254)
T 3lra_A           87 AQLQPHVDSQEDLTFLWDMFGEKSLHSLVKIHEKLHY  123 (254)
T ss_dssp             HHHTTTCCCTTHHHHHHHHC---CHHHHHHHHHHHHH
T ss_pred             HhhhcccCCcccHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence              44444434577779999999999999999999975

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=94.08  E-value=0.0038  Score=55.72  Aligned_cols=37  Identities=27%  Similarity=0.632  Sum_probs=32.4

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||.+..       +..|+|++|||+.|+.+.|.+|
T Consensus       124 ~~~~~~alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W  160 (303)
T 2lqn_A          124 NLEYVRTLYDFPGND-------AEDLPFKKGEILVIIEKPEEQW  160 (303)
Confidence            456799999999886       5579999999999999988888

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=94.87  E-value=0.013  Score=52.23  Aligned_cols=40  Identities=13%  Similarity=0.140  Sum_probs=31.8

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|++||.|...     .+..|+|++|||+.|+.++|..|
T Consensus       235 ~~~~~~~al~d~~~~a~-----~~~eL~~~~Gd~i~v~~~~~~gW  274 (304)
T 2eyz_A          235 NGPIYARVIQKRVPNAY-----DKTALALEVGELVKVTKINVSGQ  274 (304)
T ss_dssp             SCCCCSCCSSCBCCCTT-----CSSCCCBCTTSCCEEEEECTTSC
T ss_pred             CCCEEEEEeeeecCCCC-----CCCeecccCCCEEEEEEecCCCe
Confidence            34568999999996421     13479999999999999988888

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=94.83  E-value=0.017  Score=54.54  Aligned_cols=36  Identities=33%  Similarity=0.522  Sum_probs=30.4

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC-CCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD-DAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~-d~~W  269 (269)
                      ..+++|+|||.+..       +..|+|++||++.|++++ |.+|
T Consensus        43 ~~~~~alyd~~~~~-------~~els~~~gd~~~v~~~~~~~~w   79 (495)
T 1opk_A           43 PNLFVALYDFVASG-------DNTLSITKGEKLRVLGYNHNGEW   79 (495)
T ss_dssp             -CEEEESSCBCCCS-------TTBCCBCTTCEEEEEEECTTSSE
T ss_pred             CcEEEEeCCcCCCC-------CCCCCccCCCEEEEeecCCCCCc
Confidence            34789999999987       558999999999999876 6777

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=94.53  E-value=0.023  Score=38.33  Aligned_cols=22  Identities=27%  Similarity=0.662  Sum_probs=19.6

Q ss_pred             CCccccCCCCEEEEEeCCCCCC
Q psy14174        248 DAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       248 e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +..|+|++|||+.|+.+.+..|
T Consensus         3 ~~eLs~~~Gd~i~v~~~~~~~W   24 (63)
T 1tuc_A            3 PREVTMKKGDILTLLNSTNKDW   24 (63)
T ss_dssp             CCCCCBCTTCEEEEEECCSSSE
T ss_pred             ccccCCCCCCEEEEEEecCCCE
Confidence            3469999999999999988888

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=93.77  E-value=0.038  Score=53.09  Aligned_cols=35  Identities=14%  Similarity=0.188  Sum_probs=30.9

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..++|+++|.+..       +..|+|++|||+.|+++.|..|
T Consensus       443 ~~~~aly~y~a~~-------~dELs~~~GD~i~v~~~~~~gW  477 (526)
T 2de0_X          443 HNQIAIYAHQPRT-------ADEIPMEPGDIIGVAGNHWDGY  477 (526)
T ss_dssp             CEEEECSCBCCSS-------TTBCCBCTTCEEEEEEECSSSE
T ss_pred             cceEEeecCCCCC-------CCcCCcCCCCEEEEccccCCCe
Confidence            4589999999887       5579999999999999988888

>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B

Probab=93.54  E-value=0.081  Score=34.17  Aligned_cols=28  Identities=18%  Similarity=0.360  Sum_probs=25.1

Q ss_pred             hhhHHHHHHHhcChhHHHHHhhhhcccc
Q psy14174         31 DEELLFLSSLLQSKELNALVHVHNSIVN   58 (269)
Q Consensus        31 ~~d~~~l~~~l~~~~~~~l~~~~~~~~~   58 (269)
                      ..+..-|..+|+.|.|++|+++||.+..
T Consensus        18 ~~~~~EL~~lL~~PHfqaLl~ahD~Va~   45 (50)
T 1y74_B           18 NNDAKELKRILTQPHFMALLQTHDVVAH   45 (50)
T ss_dssp             CHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence            4678889999999999999999998864

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=92.61  E-value=0.013  Score=52.15  Aligned_cols=39  Identities=15%  Similarity=0.114  Sum_probs=31.5

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++|+|||.+..+.     +..|+|++|||+.|+++.|..|
T Consensus       236 ~~~~~~alydy~~~~~~-----~~eLs~~~Gd~i~v~~~~~~gW  274 (303)
T 2lqn_A          236 GPVFAKAIQKRVPCAYD-----KTALALEVGDIVKVTRMNINGQ  274 (303)
Confidence            34689999999865421     2379999999999999998888

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=93.40  E-value=0.041  Score=38.58  Aligned_cols=22  Identities=27%  Similarity=0.662  Sum_probs=19.7

Q ss_pred             CCccccCCCCEEEEEeCCCCCC
Q psy14174        248 DAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       248 e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +..|+|++||++.|+.+.|.+|
T Consensus         5 ~~eLs~~~Gd~i~v~~~~~~~W   26 (77)
T 2jmc_A            5 PREVTMKKGDILTLLNSTNKDW   26 (77)
T ss_dssp             SCCCCCCTTCEEECCCCCCSSC
T ss_pred             CCccCCCCCCEEEEEEecCCCE
Confidence            4469999999999999988888

>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=93.39  E-value=0.033  Score=41.62  Aligned_cols=42  Identities=24%  Similarity=0.349  Sum_probs=29.4

Q ss_pred             eeeeeecccCCCCCCC-----CCC----C--CCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPY-----IPC----K--DAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~-----ipc----~--e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      -.+|..|+|++....+     .++    +  ...|+|++||+|.||.+.+.+|
T Consensus        24 ke~rkKFk~~G~~~vl~~~~a~~~f~~~k~g~~DLpfkkGE~LeVI~~~e~~w   76 (102)
T 1ri9_A           24 KDFRKKFKYDGEIRVLYSTKVTTSITSKKWGTRDLQVKPGESLEVIQTTDDTK   76 (102)
T ss_dssp             HHHHHHTCCCSCCCCSSCCBCCTTSCSSCCCTTBCCCCTTCBCEEEEESSSSE
T ss_pred             HHHHHHhccCCCceEEEEEEEeeccccccCCcccCCcCCCCEEEEEEeCCCCE
Confidence            3467788888773221     111    2  2359999999999999888777

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=93.37  E-value=0.014  Score=55.35  Aligned_cols=36  Identities=39%  Similarity=0.763  Sum_probs=0.0

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC-CCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD-AYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d-~~W  269 (269)
                      .++++|+|||.+..       +..|+|++||||.|+.+.| +.|
T Consensus       428 ~~~~~alydy~~~~-------~~eLsf~~Gd~i~vl~~~~~~~W  464 (486)
T 3haj_A          428 EVRVRALYDYEGQE-------HDELSFKAGDELTKMEDEDEQGW  464 (486)
T ss_dssp             --------------------------------------------
T ss_pred             CeEEEEccccCCCC-------CCcCccCCCCEEEEEEecCCCCe
Confidence            56899999999876       4579999999999999874 477

>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}

Probab=92.80  E-value=0.028  Score=55.46  Aligned_cols=40  Identities=28%  Similarity=0.364  Sum_probs=31.2

Q ss_pred             cccceeeeeecccCCC--CCCCCCCCCCccccCCCCEEEEEeC-----CCCCC
Q psy14174        224 RESKIRVRAHFDYDAS--SDPYIPCKDAGLSFNKGDILHVVSQ-----DDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~--~D~~ipc~e~gL~F~~GDIL~vv~~-----~d~~W  269 (269)
                      +.++.|+.|++||...  .|      ..-|+|++|||+.+++.     .|++|
T Consensus       570 k~rs~~~~Al~d~~~~~~~~------~~~L~f~kGDlI~l~~~~~~~~~~~~W  616 (655)
T 3pvl_A          570 RKRSKYVVALQDNPNPAGEE------SGFLSFAKGDLIILDHDTGEQVMNSGW  616 (655)
T ss_dssp             HHHCCEEEESSCCCC-----------CCBCCCCTTCEEEESSCCHHHHHHSSE
T ss_pred             hhcchhhhHHhhcccCCCCC------CCcccccCCCEEEEccccCcccCCCCe
Confidence            5678999999999832  22      33699999999999988     46788

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=87.15  E-value=0.12  Score=45.98  Aligned_cols=38  Identities=16%  Similarity=0.183  Sum_probs=0.0

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+.+|+++|.+..+.     +..|+|++|||+.|+.+++..|
T Consensus       247 ~~~a~alyd~~~~~~~-----~~ELs~~~Gd~i~v~~~~~~~w  284 (308)
T 3qwy_A          247 PAKAKVTFDRVPNAYD-----PTQLRVKKGQTVLVTQKMSNGM  284 (308)
T ss_dssp             -------------------------------------------
T ss_pred             ccccccccccccccCC-----cccceeCCCCEEEEEEEcCCCc
Confidence            4578999999765421     3479999999999999955445

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=86.33  E-value=0.41  Score=42.07  Aligned_cols=35  Identities=20%  Similarity=0.338  Sum_probs=29.7

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+.|+|++||.+.          .++|++||++.+++.+++.|
T Consensus       196 ~~~~~v~al~dy~~~----------e~~~~kge~~~l~~~s~~~w  230 (283)
T 3pe0_A          196 RGRLPLLAVCDYKQV----------EVTVHKGDECQLVGPAQPSH  230 (283)
T ss_dssp             SSCEEEEECSCEECS----------SCEECTTCEEEEEEECSTTE
T ss_pred             CCCceEEeecCccCC----------cccccCCCEEEEeeCCCCCc
Confidence            456889999999763          48999999999999988766

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	269
d1kwaa_	88	b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [Ta	1e-23
d1va8a1	100	b.36.1.1 (A:8-107) Maguk p55 subfamily member 5 {M	5e-22
d1n7ea_	95	b.36.1.1 (A:) Glutamate receptor-interacting prote	2e-20
d1rzxa_	98	b.36.1.1 (A:) GTPase-binding domain of the cell po	1e-19
d1g9oa_	91	b.36.1.1 (A:) Na+/H+ exchanger regulatory factor,	4e-18
d2fnea1	88	b.36.1.1 (A:1955-2042) Multiple PDZ domain protein	8e-18
d1ihja_	94	b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanoga	2e-17
d1wf8a1	94	b.36.1.1 (A:8-101) Neurabin-i {Human (Homo sapiens	6e-17
d1ufxa_	103	b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapien	1e-16
d2fe5a1	92	b.36.1.1 (A:223-314) Synapse-associated protein 10	1e-16
d1tp5a1	102	b.36.1.1 (A:302-403) Synaptic protein PSD-95 {Rat	1e-16
d1uepa_	103	b.36.1.1 (A:) Membrane associated guanylate kinase	2e-16
d1ueqa_	123	b.36.1.1 (A:) Membrane associated guanylate kinase	3e-16
d1uita_	117	b.36.1.1 (A:) Discs large 5 protein KIAA0583 {Huma	5e-16
d1v62a_	117	b.36.1.1 (A:) Glutamate receptor interacting prote	6e-16
d1qava_	90	b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [Ta	1e-15
d1vyua1	136	b.34.2.1 (A:39-174) SH3-like domain of the L-type	2e-15
d1y7na1	79	b.36.1.1 (A:12-90) Amyloid beta A4 precursor prote	2e-15
d1wfva_	103	b.36.1.1 (A:) Membrane associated guanylate kinase	2e-15
d1p1da2	99	b.36.1.1 (A:115-213) Glutamate receptor interactin	3e-15
d1whaa_	105	b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sap	3e-15
d1qaua_	112	b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS	4e-15
d1t0ha_	96	b.34.2.1 (A:) SH3-like domain of the L-type calciu	8e-15
d1x5ra1	99	b.36.1.1 (A:8-106) Glutamate receptor interacting	1e-14
d1ozia_	99	b.36.1.1 (A:) Phosphatase hPTP1e {Mouse (Mus muscu	1e-14
d1v6ba_	118	b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxI	1e-14
d1um1a_	110	b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human	1e-14
d2fcfa1	96	b.36.1.1 (A:1148-1243) Multiple PDZ domain protein	1e-14
d2cssa1	108	b.36.1.1 (A:8-115) Regulating synaptic membrane ex	2e-14
d1x6da1	107	b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sap	2e-14
d1rgra_	93	b.36.1.1 (A:) Synaptic protein PSD-95 {Rat (Rattus	2e-14
d1t2ma1	92	b.36.1.1 (A:2-93) Afadin {Human (Homo sapiens) [Ta	3e-14
d2f5ya1	77	b.36.1.1 (A:19-95) Regulator of G-protein signalin	5e-14
d1x45a1	85	b.36.1.1 (A:8-92) Amyloid beta A4 precursor protei	5e-14
d1ujda_	117	b.36.1.1 (A:) Hypothetical protein KIAA0559 {Human	5e-14
d1vyva1	145	b.34.2.1 (A:71-215) SH3-like domain of the L-type	7e-14
d1wifa_	126	b.36.1.1 (A:) hypothetical PDZ domain containing p	1e-13
d1i16a_	130	b.36.1.2 (A:) Interleukin 16 {Human (Homo sapiens)	2e-13
d1v5qa_	122	b.36.1.1 (A:) Glutamate receptor interacting prote	3e-13
d1wh1a_	124	b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human	6e-13
d1uhpa_	107	b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human	7e-13
d1wi4a1	96	b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mou	7e-13
d1wg6a_	127	b.36.1.1 (A:) Partitioning-defective 3-like protei	1e-12
d2cs5a1	106	b.36.1.1 (A:8-113) Tyrosine-protein phosphatase no	1e-12
d1uf1a_	128	b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapien	2e-12
d1ujua_	111	b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sap	2e-12
d1y74b1	50	a.194.1.1 (B:83-132) Peripheral plasma membrane pr	4e-12
d1uewa_	114	b.36.1.1 (A:) Membrane associated guanylate kinase	5e-12
d1vaea_	111	b.36.1.1 (A:) Rhophilin-2 {Mouse (Mus musculus) [T	5e-12
d1x5qa1	97	b.36.1.1 (A:8-104) Scribble (KIAA0147) {Human (Hom	8e-12
d1ueza_	101	b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapien	1e-11
d2f0aa1	92	b.36.1.1 (A:251-342) Segment polarity protein dish	1e-11
d1m5za_	91	b.36.1.1 (A:) Glutamate receptor interacting prote	1e-11
d1x5na1	101	b.36.1.1 (A:8-108) Harmonin {Human (Homo sapiens)	2e-11
d1w9ea1	85	b.36.1.1 (A:110-194) Syntenin 1 {Human (Homo sapie	4e-11
d1q3oa_	104	b.36.1.1 (A:) Shank1, PDZ domain {Rat (Rattus norv	7e-11
d1rgwa_	85	b.36.1.1 (A:) Zasp (Cypher, Oracle 1) {Human (Homo	1e-10
d1r6ja_	82	b.36.1.1 (A:) Syntenin 1 {Human (Homo sapiens) [Ta	2e-10
d1vb7a_	94	b.36.1.1 (A:) PDZ-LIM protein mystique {Mouse (Mus	2e-10
d2csja1	104	b.36.1.1 (A:8-111) Tight junction protein ZO-2, Tj	2e-10
d1wi2a_	104	b.36.1.1 (A:) PDZ domain containing protein 11, Pd	5e-10
d1ujva_	96	b.36.1.1 (A:) Membrane associated guanylate kinase	6e-10
d2h3la1	103	b.36.1.1 (A:1310-1412) Erbin {Human (Homo sapiens)	8e-10
d1v5la_	103	b.36.1.1 (A:) Alpha-actinin-2 associated LIM prote	5e-09
d1wf7a_	103	b.36.1.1 (A:) Enigma homolog ENH {Mouse (Mus muscu	3e-08
d1kjwa1	96	b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicu	8e-08
d1fc6a3	92	b.36.1.3 (A:157-248) Photosystem II D1 C-terminal	2e-07
d1ky9b2	88	b.36.1.4 (B:359-446) Protease Do (DegP, HtrA), C-t	4e-07
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	5e-06
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	1e-05
d1sema_	58	b.34.2.1 (A:) Growth factor receptor-bound protein	1e-05
d1ckaa_	57	b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse	1e-05
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	1e-05
d1gcqa_	56	b.34.2.1 (A:) Growth factor receptor-bound protein	2e-05
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	2e-05
d2z9ia1	88	b.36.1.4 (A:227-314) Protease PepD {Mycobacterium	3e-05
d1spka_	72	b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RI	3e-05
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	3e-05
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	4e-05
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	4e-05
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	5e-05
d2v1ra1	67	b.34.2.1 (A:10-76) Peroxisomal membrane protein Pe	8e-05
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	1e-04
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	1e-04
d1wiea_	96	b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human	1e-04
d1qcfa1	65	b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Hu	2e-04
d1efna_	57	b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase,	2e-04
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	3e-04
d1gl5a_	67	b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musc	4e-04
d1uhfa_	69	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	4e-04
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	5e-04
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	6e-04
d1k32a1	91	b.36.1.3 (A:763-853) Tricorn protease {Archaeon Th	7e-04
d1oota_	58	b.34.2.1 (A:) Hypothetical protein YFR024c {Baker'	8e-04
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	0.001
d1ugva_	72	b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA062	0.001
d1fmka1	64	b.34.2.1 (A:82-145) c-src protein tyrosine kinase	0.001
d1bb9a_	83	b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicu	0.001
d1uhca_	79	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	0.002
d1i07a_	59	b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus	0.002
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	0.002
d1k9aa1	71	b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (cs	0.003
d1uffa_	93	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	0.003
d1u5sa1	71	b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [Tax	0.004
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	0.004

>d1kwaa_ b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Cask/Lin-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.5 bits (222), Expect = 1e-23
 Identities = 37/84 (44%), Positives = 59/84 (70%), Gaps = 2/84 (2%)

Query: 135 VKIVQLVKS-NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
            ++VQ  K+ +EP+G T+K +E +   +VAR+MHGG   R G +HVGDE+ E+NGI+V  
Sbjct: 2   SRLVQFQKNTDEPMGITLKMNELNH-CIVARIMHGGMIHRQGTLHVGDEIREINGISVAN 60

Query: 194 KTPGDVLKILQSSEGTITFKLIPA 217
           +T   + K+L+   G+ITFK++P+
Sbjct: 61  QTVEQLQKMLREMRGSITFKIVPS 84

>d1va8a1 b.36.1.1 (A:8-107) Maguk p55 subfamily member 5 {Mouse (Mus musculus) [TaxId: 10090]} Length = 100

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Maguk p55 subfamily member 5
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 85.7 bits (212), Expect = 5e-22
 Identities = 41/86 (47%), Positives = 62/86 (72%), Gaps = 3/86 (3%)

Query: 133 ETVKIVQLVKS-NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINV 191
           ETVKIV++ K+ + PLGAT++   E   ++++R++ GGAA++SGL+H GDEV E+NGI +
Sbjct: 17  ETVKIVRIEKARDIPLGATVR--NEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEI 74

Query: 192 EGKTPGDVLKILQSSEGTITFKLIPA 217
            GK   +V  +L    GT+TF LIP+
Sbjct: 75  RGKDVNEVFDLLSDMHGTLTFVLIPS 100

>d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1, GRIP1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 95

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor-interacting protein 1, GRIP1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 81.4 bits (201), Expect = 2e-20
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 1/84 (1%)

Query: 134 TVKIVQLVKSNEPLGATIK-TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVE 192
            +  V+L +   PLG TI  T+E    I+++ +  GG A+R+G IH+GD +  +N  +++
Sbjct: 3   IIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLK 62

Query: 193 GKTPGDVLKILQSSEGTITFKLIP 216
           GK   + + +LQ +  T+T K+  
Sbjct: 63  GKPLSEAIHLLQMAGETVTLKIKK 86

>d1rzxa_ b.36.1.1 (A:) GTPase-binding domain of the cell polarity protein par6 (Par-6B) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 98

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: GTPase-binding domain of the cell polarity protein par6 (Par-6B)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 79.6 bits (196), Expect = 1e-19
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 12/98 (12%)

Query: 133 ETVKIVQLVK--SNEPLGATIK----------TDEESGKIVVARVMHGGAADRSGLIHVG 180
           ET + V+L+K  S++PLG  I+            E+   I ++R++ GG A+ +GL+ V 
Sbjct: 1   ETHRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTGLLAVN 60

Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD 218
           DEV EVNGI V GKT   V  ++ ++   +   + PA+
Sbjct: 61  DEVIEVNGIEVAGKTLDQVTDMMVANSSNLIITVKPAN 98

>d1g9oa_ b.36.1.1 (A:) Na+/H+ exchanger regulatory factor, NHERF {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Na+/H+ exchanger regulatory factor, NHERF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.2 bits (185), Expect = 4e-18
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           ++  L K     G  +  ++      +  V  G  A+++GL   GD + EVNG NVE +T
Sbjct: 5   RLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGL-LAGDRLVEVNGENVEKET 63

Query: 196 PGDVLKILQSSEGTITFKLIPAD 218
              V+  ++++   +   ++  +
Sbjct: 64  HQQVVSRIRAALNAVRLLVVDPE 86

>d2fnea1 b.36.1.1 (A:1955-2042) Multiple PDZ domain protein {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Multiple PDZ domain protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (182), Expect = 8e-18
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 135 VKIVQLVKSNEPLGATIKTDEESGK----IVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
            K + L +  + LG +I     S      I V  V   GAA   G +  GD++  VNG +
Sbjct: 3   CKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQS 62

Query: 191 VEGKTPGDVLKILQSSEGTITFKLI 215
           +EG T  + + IL+ ++GT+T  ++
Sbjct: 63  LEGVTHEEAVAILKRTKGTVTLMVL 87

>d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 94

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Inad
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 73.0 bits (179), Expect = 2e-17
 Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 133 ETVKIVQLVKS-NEPLGATIK-------TDEESGKIVVARVMHGGAADRSGLIHVGDEVC 184
           E + +V L K+  +  G  I         + ++  I +  ++    A   G + VGD + 
Sbjct: 2   ELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRIL 61

Query: 185 EVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            +NG +V   T   V+ +++ ++  I  ++
Sbjct: 62  SLNGKDVRNSTEQAVIDLIKEADFKIELEI 91

>d1wf8a1 b.36.1.1 (A:8-101) Neurabin-i {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Neurabin-i
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (176), Expect = 6e-17
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 7/84 (8%)

Query: 138 VQLVKSNEPLGATIK-------TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
           V+L K  + LG +I           E   I V  V  GGAA R G I V D++ EV+GI+
Sbjct: 6   VELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGIS 65

Query: 191 VEGKTPGDVLKILQSSEGTITFKL 214
           + G T      +L++++G + F +
Sbjct: 66  LVGVTQNFAATVLRNTKGNVRFVI 89

>d1ufxa_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: KIAA1526 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (175), Expect = 1e-16
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 133 ETVKIVQLVKSNEPLGATIKTDEESGK--IVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
            +  +V++ KS   LG  I+    + +    +  +  GG+A   G + VG  + EVNG+ 
Sbjct: 5   SSGTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLT 64

Query: 191 VEGKTPGDVLKILQSSEGTIT 211
           + GK   +  +I+  +  T  
Sbjct: 65  LRGKEHREAARIIAEAFKTKD 85

>d2fe5a1 b.36.1.1 (A:223-314) Synapse-associated protein 102 {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Synapse-associated protein 102
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.1 bits (174), Expect = 1e-16
 Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 134 TVKIVQLVKSNEPLGATI------KTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN 187
           T+  V L+K  + LG +I      +       I + +++ GGAA + G + +GD +  VN
Sbjct: 1   TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVN 60

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKL 214
             N++     + +  L+++   +  K+
Sbjct: 61  NTNLQDVRHEEAVASLKNTSDMVYLKV 87

>d1tp5a1 b.36.1.1 (A:302-403) Synaptic protein PSD-95 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 102

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Synaptic protein PSD-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 71.5 bits (175), Expect = 1e-16
 Identities = 20/86 (23%), Positives = 42/86 (48%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
           +D     + + + + +  LG  I   E+   I ++ ++ GG AD SG +  GD++  VNG
Sbjct: 4   EDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNG 63

Query: 189 INVEGKTPGDVLKILQSSEGTITFKL 214
           +++   +       L+++  T+T   
Sbjct: 64  VDLRNASHEQAAIALKNAGQTVTIIA 89

>d1uepa_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (173), Expect = 2e-16
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 138 VQLVKSNEPLGATIKT-DEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTP 196
           V L +     G  I   DE    I++  V+  G+ADR G +H GDE+  V+GI V GKT 
Sbjct: 13  VHLRRMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTH 72

Query: 197 GDVLKILQSSEGTITFKLI 215
             V+ ++  +       L 
Sbjct: 73  RYVIDLMHHAARNGQVNLT 91

>d1ueqa_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]} Length = 123

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.1 bits (174), Expect = 3e-16
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 132 EETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
           + T     L KSN   G TI   +E  + + V  V+  G A + G +  GD +  +N + 
Sbjct: 17  KGTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVC 76

Query: 191 VEGKTPGDVLKILQSSEGTITFKLI 215
           V G T  DV+K+ QS     +  L+
Sbjct: 77  VLGHTHADVVKLFQSVPIGQSVNLV 101

>d1uita_ b.36.1.1 (A:) Discs large 5 protein KIAA0583 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Discs large 5 protein KIAA0583
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 5e-16
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
               E  + V++ K +EPLG +I + E+ G I V++V  G  A ++GL   GD++ E NG
Sbjct: 14  RPYVEEPRHVKVQKGSEPLGISIVSGEKGG-IYVSKVTVGSIAHQAGL-EYGDQLLEFNG 71

Query: 189 INVEGKTPGDVLKILQSSEGTITFKL 214
           IN+   T      I+     TIT   
Sbjct: 72  INLRSATEQQARLIIGQQCDTITILA 97

>d1v62a_ b.36.1.1 (A:) Glutamate receptor interacting protein 2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor interacting protein 2, GRIP2 (KIAA1719)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 6e-16
 Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 135 VKIVQLVKS-NEPLGATIKTDEESGK--IVVARVMHGGAADRSGLIHVGDEVCEVNGINV 191
             +V++VK+    LG ++ T     K  I + R+      DRSG +H GD +  ++G ++
Sbjct: 16  PLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSM 75

Query: 192 EGKTPGDVLKILQSSEGTITFKLIPA 217
           E  +  +  K+L S    +  +++P 
Sbjct: 76  EHCSLLEATKLLASISEKVRLEILPV 101

>d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId: 10090]} Length = 90

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Syntrophin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.3 bits (167), Expect = 1e-15
 Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 136 KIVQLVKS-NEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           + V + K+    LG +IK   E+   I+++++  G AAD++  + VGD +  VNG ++  
Sbjct: 6   RRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSS 65

Query: 194 KTPGDVLKILQSSEGTITFKL 214
            T  + ++ L+ +   +  ++
Sbjct: 66  ATHDEAVQALKKTGKEVVLEV 86

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 136

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.3 bits (169), Expect = 2e-15
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            VR +  Y    D   P + +G++F   D LH+  +    W
Sbjct: 25  AVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDW 65

>d1y7na1 b.36.1.1 (A:12-90) Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (165), Expect = 2e-15
 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 7/84 (8%)

Query: 134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           T  +++       LG +++        ++  +M GG A+R G+  VG  + E+NG +V  
Sbjct: 2   TTVLIRRPDLRYQLGFSVQNG------IICSLMRGGIAERGGV-RVGHRIIEINGQSVVA 54

Query: 194 KTPGDVLKILQSSEGTITFKLIPA 217
                ++ IL ++ G I  K +PA
Sbjct: 55  TPHEKIVHILSNAVGEIHMKTMPA 78

>d1wfva_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (166), Expect = 2e-15
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 138 VQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTP 196
           V + K  +  G +I+   E    + V R+   G A R+G + VGD++ E+NG +    T 
Sbjct: 15  VDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTH 74

Query: 197 GDVLKILQSSEGTITFKL 214
              +++++S    +   L
Sbjct: 75  ARAIELIKSGGRRVRLLL 92

>d1p1da2 b.36.1.1 (A:115-213) Glutamate receptor interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 99

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.6 bits (165), Expect = 3e-15
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 126 ELVDDEEETVKIVQLVKSNEPLGATI---KTDEESGKIVVARVMHGGAADRSGLIHVGDE 182
           E V     T  +    K +  LG TI    + +    +V++ +  G  A R+G + +GD+
Sbjct: 3   ESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDK 62

Query: 183 VCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           +  ++ I ++  +  D ++ILQ  E  +  K+
Sbjct: 63  LLAIDNIRLDSCSMEDAVQILQQCEDLVKLKI 94

>d1whaa_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Scribble (KIAA0147)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 3e-15
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 136 KIVQLVKSNEPLGATIK-------TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
            +  L +S   LG +I               I V+R+  GGAA R+G + VGD V  +NG
Sbjct: 9   HVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSING 68

Query: 189 INVEGKTPGDVLKILQSSEGTITFKL 214
           ++V        + +L ++  TI   L
Sbjct: 69  VDVTEARHDHAVSLLTAASPTIALLL 94

>d1qaua_ b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 112

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Neuronal nitric oxide synthase, NNOS
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.8 bits (165), Expect = 4e-15
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           V  V+L K     LG  +K       ++++ ++ GGAA++SGLI  GD +  VN   +  
Sbjct: 2   VISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVD 61

Query: 194 KTPGDVLKILQSSEGTITFKLI 215
            +    L++L+         LI
Sbjct: 62  LSYDSALEVLRGIASETHVVLI 83

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 66.1 bits (161), Expect = 8e-15
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +     VR +  Y A+ +  +P     +SF   D LHV  + +  W
Sbjct: 18  KPVAFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDW 63

>d1x5ra1 b.36.1.1 (A:8-106) Glutamate receptor interacting protein 2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor interacting protein 2, GRIP2 (KIAA1719)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (161), Expect = 1e-14
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 133 ETVKIVQLVKSNEPLGATIK-----TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN 187
           ET ++V         G  ++     T+  S   +V  +     A+R GL+ VGD V  +N
Sbjct: 8   ETTEVVLCGDPLSGFGLQLQGGIFATETLSSPPLVCFIEPDSPAERCGLLQVGDRVLSIN 67

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKL 214
           GI  E  T  +  ++L+ +       L
Sbjct: 68  GIATEDGTMEEANQLLRDAALAHKVVL 94

>d1ozia_ b.36.1.1 (A:) Phosphatase hPTP1e {Mouse (Mus musculus) [TaxId: 10090]} Length = 99

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Phosphatase hPTP1e
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.1 bits (161), Expect = 1e-14
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 9/86 (10%)

Query: 138 VQLVKSNEPLGATIK---------TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
           V+L K++  LG ++          T    G I V  ++  GAA+  G IH GD V  VNG
Sbjct: 8   VELAKTDGSLGISVTVLFDKGGVNTSVRHGGIYVKAIIPKGAAESDGRIHKGDRVLAVNG 67

Query: 189 INVEGKTPGDVLKILQSSEGTITFKL 214
           +++EG T    ++ L+++   +   L
Sbjct: 68  VSLEGATHKQAVETLRNTGQVVHLLL 93

>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId: 10090]} Length = 118

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Harmonin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.6 bits (162), Expect = 1e-14
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 131 EEETVKIVQLVKSNEPLGATIK--TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
             + V++++ +K    L   ++   D   GK+VV+ V  GGAA+R G +  GDE+  +NG
Sbjct: 15  AGKDVRLLR-IKKEGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAING 73

Query: 189 INVEGKTPGDVLKILQSSEG 208
             V   T  +    LQ +  
Sbjct: 74  KIVTDYTLAEAEAALQKAWN 93

>d1um1a_ b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human (Homo sapiens) [TaxId: 9606]} Length = 110

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Hypothetical protein KIAA1849
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (161), Expect = 1e-14
 Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 135 VKIVQLVKSNEPLGATIKTDEESGK----IVVARVMHGGAADRSGLIHVGDEVCEVNGIN 190
           V  V+L +    LG  +     +      + +  ++ G  A   G + +GD + EVNG +
Sbjct: 9   VFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSS 68

Query: 191 VEGKTPGDVLKILQSSEGTITFKL 214
           + G      + +++     + F +
Sbjct: 69  LLGLGYLRAVDLIRHGGKKMRFLV 92

>d2fcfa1 b.36.1.1 (A:1148-1243) Multiple PDZ domain protein {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Multiple PDZ domain protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (160), Expect = 1e-14
 Identities = 16/90 (17%), Positives = 40/90 (44%), Gaps = 11/90 (12%)

Query: 136 KIVQLVKS-NEPLGATIK----------TDEESGKIVVARVMHGGAADRSGLIHVGDEVC 184
           + V+L +  ++ LG +I             E    I +  V+    A ++G +  GD + 
Sbjct: 3   RRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIV 62

Query: 185 EVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           EV+G+++   +    ++ ++ +   + F +
Sbjct: 63  EVDGMDLRDASHEQAVEAIRKAGNPVVFMV 92

>d2cssa1 b.36.1.1 (A:8-115) Regulating synaptic membrane exocytosis protein 1, RIMS1 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Regulating synaptic membrane exocytosis protein 1, RIMS1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (160), Expect = 2e-14
 Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 136 KIVQLVKSNEPLGATIKTDEESGK----IVVARVMHGGAADRSGLIHVGDEVCEVNGINV 191
           +      S   LG  +   + +        + +V  G  AD  G +  GDEV E NG  +
Sbjct: 21  RTTMPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPL 80

Query: 192 EGKTPGDVLKILQSSEGTITFKLI 215
            G T  +V  I+  S+     ++I
Sbjct: 81  PGATNEEVYNIILESKSEPQVEII 104

>d1x6da1 b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: Interleukin 16
domain: Interleukin 16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 2e-14
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 131 EEETVKIVQLVK-SNEPLGATIK--TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVN 187
           + + + +  L K     LG ++    D E+  I V RV   G A + G I  G+EV  +N
Sbjct: 5   QLDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSIN 64

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKLI 215
           G +++G T  D L IL+ +       ++
Sbjct: 65  GKSLKGTTHHDALAILRQAREPRQAVIV 92

>d1rgra_ b.36.1.1 (A:) Synaptic protein PSD-95 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 93

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Synaptic protein PSD-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.9 bits (158), Expect = 2e-14
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 135 VKIVQLVKSNEPLGATIK------TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
            + + L + N  LG +I          +   I + +++ GGAA + G + V D +  VN 
Sbjct: 2   YEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNE 61

Query: 189 INVEGKTPGDVLKILQSSEGTITFKL 214
           ++V   T    ++ L+ +   +   +
Sbjct: 62  VDVREVTHSAAVEALKEAGSIVRLYV 87

>d1t2ma1 b.36.1.1 (A:2-93) Afadin {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Afadin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (158), Expect = 3e-14
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGK----IVVARVMHGGAADRSGLIHVGDEVCEV 186
           +E  +  V L K N  +G +I   + +G+    I V  V+ GGAAD  G +  GD++  V
Sbjct: 1   KEPEIITVTLKKQN-GMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSV 59

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKL 214
           +G ++ G +     +++  +   +T ++
Sbjct: 60  DGRSLVGLSQERAAELMTRTSSVVTLEV 87

>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3, RGS3 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Regulator of G-protein signaling 3, RGS3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (155), Expect = 5e-14
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 138 VQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPG 197
           + + +  +  G TI  D     + V  V  GG A+R+GL    D V ++N   VE     
Sbjct: 1   ITIPRGKDGFGFTICCDSP---VRVQAVDSGGPAERAGL-QQLDTVLQLNERPVEHWKCV 56

Query: 198 DVLKILQSSEGTITFKL 214
           ++   ++S    I   +
Sbjct: 57  ELAHEIRSCPSEIILLV 73

>d1x45a1 b.36.1.1 (A:8-92) Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) {Human (Homo sapiens) [TaxId: 9606]} Length = 85

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (155), Expect = 5e-14
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 138 VQLVKS-NEPLGATIKT---DEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           V + K   E LG  I           +++A +MHGG A++SG +++GD++  +NG ++ G
Sbjct: 2   VFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVG 61

Query: 194 KTPGDVLKILQSSEGTITFKL 214
                   I++  +     KL
Sbjct: 62  LPLSTCQSIIKGLKNQSRVKL 82

>d1ujda_ b.36.1.1 (A:) Hypothetical protein KIAA0559 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Hypothetical protein KIAA0559
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (157), Expect = 5e-14
 Identities = 18/67 (26%), Positives = 32/67 (47%)

Query: 148 GATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE 207
           G  I          +A+++ GG+A+++G +  G +V E NGI +  KT  +V  I+    
Sbjct: 39  GKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQS 98

Query: 208 GTITFKL 214
           G     +
Sbjct: 99  GEAEICV 105

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.1 bits (158), Expect = 7e-14
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            V+ +  Y  + D  +P   + +SF+  D LH+  + +  W
Sbjct: 25  AVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDW 65

>d1wifa_ b.36.1.1 (A:) hypothetical PDZ domain containing protein Uqcrc2 (4930408O21Rik) {Mouse (Mus musculus) [TaxId: 10090]} Length = 126

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: hypothetical PDZ domain containing protein Uqcrc2 (4930408O21Rik)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.9 bits (155), Expect = 1e-13
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 138 VQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPG 197
            +L   N  LG  +   +    + ++ +++ GAA   G++  GD +  V   NV G T  
Sbjct: 31  TKLTVGNLGLGLVVI--QNGPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLR 88

Query: 198 DVLKILQSSEGTITFKLI 215
           + LK+LQ+       ++ 
Sbjct: 89  EFLKLLQNITIGTVLQIK 106

>d1i16a_ b.36.1.2 (A:) Interleukin 16 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: Interleukin 16
domain: Interleukin 16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (153), Expect = 2e-13
 Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGK----IVVARVMHGGAADRSGLIHVGDEVC 184
              E TV  V L K +  LG +++  + S      + + R+  G A+++S  +  GDE+ 
Sbjct: 24  STAEATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEIL 83

Query: 185 EVNGINVEGKTPGDVLKILQSS-EGTITFKL 214
           ++ G  ++G T  +   I+++  +G +T  +
Sbjct: 84  QLGGTAMQGLTRFEAWNIIKALPDGPVTIVI 114

>d1v5qa_ b.36.1.1 (A:) Glutamate receptor interacting protein {Mouse (Mus musculus) [TaxId: 10090]} Length = 122

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor interacting protein
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.7 bits (152), Expect = 3e-13
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 131 EEETVKIVQLVKSNEPLGATIK-----TDEESGKIVVARVMHGGAADRSGLIHVGDEVCE 185
             ET ++V         G  ++     T+  S   +++ +     A+R G++ +GD V  
Sbjct: 13  HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMA 72

Query: 186 VNGINVEGKTPGDVLKILQSSEGTITFKL 214
           +NGI  E  T  +  ++L+ S  T    L
Sbjct: 73  INGIPTEDSTFEEANQLLRDSSITSKVTL 101

>d1wh1a_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Hypothetical protein KIAA1095
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 6e-13
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 8/93 (8%)

Query: 122 EIPQELVDDEEETVKIVQLVKSN--EPLGATI---KTDEESGKIVVARVMHGGAADRSGL 176
           +I QE+  +E E ++ V L + N  + LG T+     DE+   I ++ +     A + G 
Sbjct: 8   DIHQEMDREELE-LEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGR 66

Query: 177 IHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT 209
           I  GD + ++NGI V+ +   + + +L S E  
Sbjct: 67  IREGDRIIQINGIEVQNRE--EAVALLTSEENK 97

>d1uhpa_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Hypothetical protein KIAA1095
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (149), Expect = 7e-13
 Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 138 VQLVKSNEPLGATIK---------TDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNG 188
           + L + +  LG  I              S  I V++++  G A + G + + D + EVNG
Sbjct: 12  LVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNG 71

Query: 189 INVEGKTPGDVLKILQSSEGTITFKLI 215
            ++   T    ++  ++++  I  +++
Sbjct: 72  RDLSRATHDQAVEAFKTAKEPIVVQVL 98

>d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus musculus) [TaxId: 10090]} Length = 96

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Syntaxin binding protein 4
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.1 bits (148), Expect = 7e-13
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 8/93 (8%)

Query: 130 DEEETVKIVQLVKSNEPLGATIKTDEESGK---IVVARVMHGGAADRSGLIHVGDEVCEV 186
           D +   +++ + K    LG  I       +   + +  V+ GG   + G +  GD++  +
Sbjct: 4   DRDPAFRVITVTKET-GLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSI 62

Query: 187 NGINVEGKTPGDVLKILQSS----EGTITFKLI 215
           N  ++ G +  +   I+  +    E       I
Sbjct: 63  NKESMIGVSFEEAKSIITRAKLRSESPWEIAFI 95

>d1wg6a_ b.36.1.1 (A:) Partitioning-defective 3-like protein, PAR3-L (RIKEN cDNA 2810455b10) {Mouse (Mus musculus) [TaxId: 10090]} Length = 127

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Partitioning-defective 3-like protein, PAR3-L (RIKEN cDNA 2810455b10)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.2 bits (148), Expect = 1e-12
 Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 5/81 (6%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGK-----IVVARVMHGGAADRSGLIHVGDEVCE 185
           E+ T++I      +  LG ++K ++         I +  ++HGGAA + G + + D++  
Sbjct: 23  EQLTLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIA 82

Query: 186 VNGINVEGKTPGDVLKILQSS 206
           VNG  + GK+  + ++ L+ S
Sbjct: 83  VNGETLLGKSNHEAMETLRRS 103

>d2cs5a1 b.36.1.1 (A:8-113) Tyrosine-protein phosphatase non-receptor type 4, PTPN4 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Tyrosine-protein phosphatase non-receptor type 4, PTPN4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (146), Expect = 1e-12
 Identities = 18/87 (20%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 132 EETVKIVQLVKS-NEPLGATIKTDEESGK-IVVARVMHGGAADRS-GLIHVGDEVCEVNG 188
            + + ++++    N   G  +K   +    ++V+RV  G  AD     ++ GD+V  +NG
Sbjct: 6   HDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLING 65

Query: 189 INVEGKTPGDVLKILQSSEGTITFKLI 215
            ++   T   V+  +++S    + +L+
Sbjct: 66  RDIAEHTHDQVVLFIKASCERHSGELM 92

>d1uf1a_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 128

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: KIAA1526 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 2e-12
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 127 LVDDEEETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCE 185
           L   +E+ V +V  +     LG TI+   E G  I +  V  G  A+ SG + VGD++ E
Sbjct: 16  LQGGDEKKVNLV--LGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSG-LKVGDQILE 72

Query: 186 VNGINVEGKTPGDVLKILQSSE 207
           VNG +       + +++L+SS 
Sbjct: 73  VNGRSFLNILHDEAVRLLKSSR 94

>d1ujua_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Scribble (KIAA0147)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 2e-12
 Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 11/91 (12%)

Query: 135 VKIVQLVKS-NEPLGATIK----------TDEESGKIVVARVMHGGAADRSGLIHVGDEV 183
           ++ + + K+  E LG +I+           D     I +++V   GAA R G + VG  +
Sbjct: 10  LRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRL 69

Query: 184 CEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
            EVN  ++ G T G+ +++L+S   T+T  +
Sbjct: 70  LEVNQQSLLGLTHGEAVQLLRSVGDTLTVLV 100

>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: All alpha proteins
fold: L27 domain
superfamily: L27 domain
family: L27 domain
domain: Peripheral plasma membrane protein cask
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (139), Expect = 4e-12
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 68  AMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDY 116
           A+Q + EVL+  +S    N+D KEL  +L +P+   LL  HD VA + Y
Sbjct: 1   AVQRAKEVLE-EISCYPENNDAKELKRILTQPHFMALLQTHDVVAHEVY 48

>d1uewa_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]} Length = 114

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 5e-12
 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIK--------TDEESGKIVVARVMHGGAADRSGLIHVG 180
               +T  +V   K NE  G  I             +    + R++ G  ADR   + VG
Sbjct: 6   SGSLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVG 65

Query: 181 DEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPADN 219
           D +  VNG ++      D++K+++ +  ++T ++IP + 
Sbjct: 66  DRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEE 104

>d1vaea_ b.36.1.1 (A:) Rhophilin-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 111

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Rhophilin-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.2 bits (143), Expect = 5e-12
 Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
            + +        LG T++ +     + V  +    +A  +G    GD +  + G++ +  
Sbjct: 16  PRGIHFTVEEGDLGFTLRGN---TPVQVHFLDPHCSASLAGA-KEGDYIVSIQGVDCKWL 71

Query: 195 TPGDVLKILQSSEGT-ITFKLI 215
           T  +V+K+L+S  G  +  K++
Sbjct: 72  TVSEVMKLLKSFGGEEVEMKVV 93

>d1x5qa1 b.36.1.1 (A:8-104) Scribble (KIAA0147) {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Scribble (KIAA0147)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (141), Expect = 8e-12
 Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 8/90 (8%)

Query: 132 EETVKIVQLVKSNEPLGATIK-------TDEESGKIVVARVMHGGAADRSGLIHVGDEVC 184
           EE    + +++    LG +I           +   I ++RV   G A R+G+  VGD++ 
Sbjct: 6   EEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGV-RVGDKLL 64

Query: 185 EVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           EVNG+ ++G    + ++ L+ +   +  ++
Sbjct: 65  EVNGVALQGAEHHEAVEALRGAGTAVQMRV 94

>d1ueza_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: KIAA1526 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (140), Expect = 1e-11
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 3/81 (3%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGI 189
           E   V + +  K++E LG +I+   E G  I V+ V  G  A++ G + VGD++  VN  
Sbjct: 8   EVRLVSL-RRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDK 65

Query: 190 NVEGKTPGDVLKILQSSEGTI 210
           ++   T  + +K L+ S+  +
Sbjct: 66  SLARVTHAEAVKALKGSKKLV 86

>d2f0aa1 b.36.1.1 (A:251-342) Segment polarity protein dishevelled homolog Dvl-2 {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 92

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Segment polarity protein dishevelled homolog Dvl-2
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 57.6 bits (139), Expect = 1e-11
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 138 VQLVK-SNEPLGATI---KTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEG 193
           V L       LG +I     +   G I +  +M GGA    G I  GD + +VN IN E 
Sbjct: 5   VTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFEN 64

Query: 194 KTPGDVLKILQSSEGT 209
            +  D +++L+     
Sbjct: 65  MSNDDAVRVLRDIVHK 80

>d1m5za_ b.36.1.1 (A:) Glutamate receptor interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 91

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.3 bits (138), Expect = 1e-11
 Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 138 VQLVKS--NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKT 195
           V L K    E  G ++        + V  +   G  D  G +   D + +VN +      
Sbjct: 10  VTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDL-GGLKPYDRLLQVNHVRTRDFD 68

Query: 196 PGDVLKILQSSEGTITFKL 214
              V+ ++  S   +   +
Sbjct: 69  CCLVVPLIAESGNKLDLVI 87

>d1x5na1 b.36.1.1 (A:8-108) Harmonin {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Harmonin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (137), Expect = 2e-11
 Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 5/93 (5%)

Query: 129 DDEEETVKIVQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVN 187
           +++E+ V I   +  +  LG +I +       I ++ V  G  +   G + +GD++ EVN
Sbjct: 6   ENKEKKVFIS--LVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVG-LEIGDQIVEVN 62

Query: 188 GINVEGKTPGDVLKILQSSEGTITFKLIPADNK 220
           G++       + + +L+SS  ++T  ++ A  +
Sbjct: 63  GVDFSNLDHKEAVNVLKSS-RSLTISIVAAAGR 94

>d1w9ea1 b.36.1.1 (A:110-194) Syntenin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 85

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Syntenin 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (135), Expect = 4e-11
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 136 KIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           + V L K  +  +G  +K+ +    I V  V     A   GL   GD+V ++NG N  G 
Sbjct: 4   REVILCKDQDGKIGLRLKSID--NGIFVQLVQANSPASLVGL-RFGDQVLQINGENCAGW 60

Query: 195 TPGDVLKILQSSEGT 209
           +     K+L+ + G 
Sbjct: 61  SSDKAHKVLKQAFGE 75

>d1q3oa_ b.36.1.1 (A:) Shank1, PDZ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 104

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Shank1, PDZ domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.8 bits (134), Expect = 7e-11
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 16/99 (16%)

Query: 131 EEETVKIVQLVKSNEPLGATIK-------------TDEESGKIVVARVMHGGAADRSGLI 177
           +E+TV + +  K +E  G  ++             T        +  V  GG A R+GL 
Sbjct: 5   KEKTVLLQK--KDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGL- 61

Query: 178 HVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIP 216
            +GD + EVNG NV       V+ +++    T+  K++ 
Sbjct: 62  RMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVM 100

>d1rgwa_ b.36.1.1 (A:) Zasp (Cypher, Oracle 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 85

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Zasp (Cypher, Oracle 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (132), Expect = 1e-10
 Identities = 15/78 (19%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 138 VQLVKSNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTP 196
           V L     P G  ++  ++    + ++R+  G  A +   +  GD V  ++G+N +  T 
Sbjct: 5   VTLTGP-GPWGFRLQGGKDFNMPLTISRITPGSKAAQ-SQLSQGDLVVAIDGVNTDTMTH 62

Query: 197 GDVLKILQSSEGTITFKL 214
            +    ++S+   ++  L
Sbjct: 63  LEAQNKIKSASYNLSLTL 80

>d1r6ja_ b.36.1.1 (A:) Syntenin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 82

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Syntenin 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 2e-10
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 8/83 (9%)

Query: 136 KIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGK 194
           + + + K S   +G   K  +      +  ++   +A R+G +     +CE+NG NV G 
Sbjct: 6   RTITMHKDSTGHVGFIFKNGK------ITSIVKDSSAARNG-LLTEHNICEINGQNVIGL 58

Query: 195 TPGDVLKILQSSEGTITFKLIPA 217
               +  IL +S   +T  ++PA
Sbjct: 59  KDSQIADILSTSGTVVTITIMPA 81

>d1vb7a_ b.36.1.1 (A:) PDZ-LIM protein mystique {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: PDZ-LIM protein mystique
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.5 bits (131), Expect = 2e-10
 Identities = 11/74 (14%), Positives = 25/74 (33%)

Query: 141 VKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVL 200
           V    P G  I    +    ++   +       +  +  GD +  +NG + E     +  
Sbjct: 12  VAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQ 71

Query: 201 KILQSSEGTITFKL 214
             ++ S   +  +L
Sbjct: 72  SKIRQSASPLRLQL 85

>d2csja1 b.36.1.1 (A:8-111) Tight junction protein ZO-2, Tjp2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 104

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Tight junction protein ZO-2, Tjp2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.5 bits (131), Expect = 2e-10
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 11/91 (12%)

Query: 131 EEETVKIVQLVKSNEPLGATIKTDEESGK-------IVVARVMHGGAADRSGLIHVGDEV 183
           E+ TV + +   S    G  +    ++         IV++ V+ GG AD  GL+   D V
Sbjct: 7   EQYTVTLQK--DSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD--GLLQENDRV 62

Query: 184 CEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
             VNG  +E       ++ L+ S       +
Sbjct: 63  VMVNGTPMEDVLHSFAVQQLRKSGKIAAIVV 93

>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11 {Mouse (Mus musculus) [TaxId: 10090]} Length = 104

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: PDZ domain containing protein 11, Pdzk11
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.4 bits (128), Expect = 5e-10
 Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 129 DDEEETVKIVQLVK-SNEPLGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEV 186
           +  +   +IV L K     LG  I+  + S   I +++V+    A R+G +  GD+V  V
Sbjct: 10  ELTQFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAG-LQEGDQVLAV 68

Query: 187 NGINVEGKTPGDVLKILQSSEGTITFKL 214
           N ++ +       ++IL+++   I+ ++
Sbjct: 69  NDVDFQDIEHSKAVEILKTA-REISMRV 95

>d1ujva_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (127), Expect = 6e-10
 Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 5/86 (5%)

Query: 130 DEEETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGI 189
             +  +  + +VK  +  G TI       ++                +  GD + E+N  
Sbjct: 6   SGQAELMTLTIVKGAQGFGFTIADSPTGQRVK-----QILDIQGCPGLCEGDLIVEINQQ 60

Query: 190 NVEGKTPGDVLKILQSSEGTITFKLI 215
           NV+  +  +V+ IL+         LI
Sbjct: 61  NVQNLSHTEVVDILKDCPIGSETSLI 86

>d2h3la1 b.36.1.1 (A:1310-1412) Erbin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Erbin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (127), Expect = 8e-10
 Identities = 17/93 (18%), Positives = 39/93 (41%), Gaps = 13/93 (13%)

Query: 131 EEETVKIVQLVKSNEPLGATIK---------TDEESGKIVVARVMHGGAADRSGLIHVGD 181
            ++ +++   V+ +  LG +I             +   I V RV   G A +   +  GD
Sbjct: 9   AKQEIRVR--VEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKL--LQPGD 64

Query: 182 EVCEVNGINVEGKTPGDVLKILQSSEGTITFKL 214
           ++ + NG +      G  + +L++ + T+   +
Sbjct: 65  KIIQANGYSFINIEHGQAVSLLKTFQNTVELII 97

>d1v5la_ b.36.1.1 (A:) Alpha-actinin-2 associated LIM protein {Mouse (Mus musculus) [TaxId: 10090]} Length = 103

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Alpha-actinin-2 associated LIM protein
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.4 bits (120), Expect = 5e-09
 Identities = 13/82 (15%), Positives = 34/82 (41%)

Query: 140 LVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDV 199
           ++    P G  +    +  + +V   +  G+   +  +  GD +  ++G   E  T  D 
Sbjct: 10  VLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADA 69

Query: 200 LKILQSSEGTITFKLIPADNKL 221
              ++++   +  K+  A+ +L
Sbjct: 70  QDRIKAASYQLCLKIDRAETRL 91

>d1wf7a_ b.36.1.1 (A:) Enigma homolog ENH {Mouse (Mus musculus) [TaxId: 10090]} Length = 103

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Enigma homolog ENH
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.5 bits (115), Expect = 3e-08
 Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 138 VQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPG 197
           V LV    P G  ++  ++    +    +  G       + +GD V  ++GI+ +G T  
Sbjct: 9   VSLVGP-APWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHL 67

Query: 198 DVLKILQSSEGTITFKL 214
           +    +++  G++   L
Sbjct: 68  EAQNKIKACTGSLNMTL 84

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.0 bits (111), Expect = 8e-08
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +RA FDYD + D     +   LSF  GD+LHV+   D  W
Sbjct: 4   IRALFDYDKTKDCGFLSQA--LSFRFGDVLHVIDAGDEEW 41

>d1fc6a3 b.36.1.3 (A:157-248) Photosystem II D1 C-terminal processing protease {Algae (Scenedesmus obliquus) [TaxId: 3088]} Length = 92

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: Tail specific protease PDZ domain
domain: Photosystem II D1 C-terminal processing protease
species: Algae (Scenedesmus obliquus) [TaxId: 3088]

 Score = 45.7 bits (108), Expect = 2e-07
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 147 LGATIKTDEESGK-IVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS 205
           +G  I  D  SGK +VV     GG A+++G    GD +  V+G  V+G +  DV  +LQ 
Sbjct: 7   VGLEITYDGGSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQG 65

Query: 206 SEGT 209
              +
Sbjct: 66  EADS 69

>d1ky9b2 b.36.1.4 (B:359-446) Protease Do (DegP, HtrA), C-terminal domains {Escherichia coli [TaxId: 562]} Length = 88

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: HtrA-like serine proteases
domain: Protease Do (DegP, HtrA), C-terminal domains
species: Escherichia coli [TaxId: 562]

 Score = 44.9 bits (106), Expect = 4e-07
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 3/75 (4%)

Query: 147 LGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS 206
            GA +    +   +VV  V  G  A + GL   GD +   N   V  K   ++ K+L S 
Sbjct: 14  EGAEMSNKGKDQGVVVNNVKTGTPAAQIGL-KKGDVIIGANQQAV--KNIAELRKVLDSK 70

Query: 207 EGTITFKLIPADNKL 221
              +   +   D+ +
Sbjct: 71  PSVLALNIQRGDSTI 85

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (97), Expect = 5e-06
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             K  V+A FDY A  +         L+F K  I+  V + +  W
Sbjct: 4   TFKCAVKALFDYKAQRE-------DELTFIKSAIIQNVEKQEGGW 41

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           RVRA +D++A  D         L+F  G+++ V+   DA W
Sbjct: 4   RVRALYDFEAVED-------NELTFKHGELITVLDDSDANW 37

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 8/45 (17%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           E+K  V+A FD++             L+F +GD++ ++++DD  W
Sbjct: 1   ETK-FVQALFDFNPQES-------GELAFKRGDVITLINKDDPNW 37

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           VRA FD++ + +         L F KGDIL +  + +  W
Sbjct: 4   VRALFDFNGNDE-------EDLPFKKGDILRIRDKPEEQW 36

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (93), Expect = 1e-05
 Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +V A +DY   +          L   KGD   ++ + +  W
Sbjct: 10  KVVALYDYMPMNA-------NDLQLRKGDEYFILEESNLPW 43

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           V+A FD+D   D         L F +GD +HV+   D  W
Sbjct: 4   VQALFDFDPQED-------GELGFRRGDFIHVMDNSDPNW 36

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +V A F Y+A+           L F +GDI+ V+S+ +  W
Sbjct: 7   QVEALFSYEATQP-------EDLEFQEGDIILVLSKVNEEW 40

>d2z9ia1 b.36.1.4 (A:227-314) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]} Length = 88

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: HtrA-like serine proteases
domain: Protease PepD
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 39.9 bits (93), Expect = 3e-05
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 13/80 (16%)

Query: 147 LGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGIN----------VEGKTP 196
           LG  +  D+++    +  V+ GGAA  +G+   G  V +V+             V  K P
Sbjct: 5   LGVQVTNDKDTLGAKIVEVVAGGAAANAGV-PKGVVVTKVDDRPINSADALVAAVRSKAP 63

Query: 197 GDV--LKILQSSEGTITFKL 214
           G    L     S G+ T ++
Sbjct: 64  GATVALTFQDPSGGSRTVQV 83

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.1 bits (91), Expect = 3e-05
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 6/44 (13%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S  +V+  F + A ++         LSF +GD+L ++  ++   
Sbjct: 6   SGQKVKTIFPHTAGNNK------TLLSFAQGDVLTLLIPEEKDG 43

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (90), Expect = 3e-05
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             RA +DY A+           +SF  GD +  V   D  W
Sbjct: 5   IFRAMYDYMAADA-------DEVSFKDGDAIINVQAIDEGW 38

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (91), Expect = 4e-05
 Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             ++ V+A F++  +++         LS  KGDI++V   ++  W
Sbjct: 8   SHQLIVKARFNFKQTNE-------DELSVCKGDIIYVTRVEEGGW 45

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.2 bits (89), Expect = 4e-05
 Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             A +DYDA+ D         L+F + D +  +   D  W
Sbjct: 3   ATAEYDYDAAED-------NELTFVENDKIINIEFVDDDW 35

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (90), Expect = 5e-05
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              ++ +A   + A  D         L+F+K DI+ V+ Q + +W
Sbjct: 8   VENLKAQALCSWTAKKD-------NHLNFSKHDIITVLEQQENWW 45

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.9 bits (88), Expect = 8e-05
 Identities = 8/41 (19%), Positives = 19/41 (46%), Gaps = 6/41 (14%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             RA +D+   +       +  ++  KGD++ ++S+ D   
Sbjct: 7   FARALYDFVPENP------EMEVALKKGDLMAILSKKDPLG 41

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (86), Expect = 1e-04
 Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            RA +D++A  +         L F  G+++ V+   +  W
Sbjct: 4   ARALYDFEALEE-------DELGFRSGEVVEVLDSSNPSW 36

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 36.6 bits (85), Expect = 1e-04
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           V A +DY   S          ++  KGDIL +++  +  W
Sbjct: 3   VLALYDYQEKSP-------REVTMKKGDILTLLNSTNKDW 35

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 1e-04
 Identities = 9/41 (21%), Positives = 13/41 (31%), Gaps = 1/41 (2%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A + Y+    P     +A L    G  L+V    D   
Sbjct: 19  LCVARYSYNPFDGPN-ENPEAELPLTAGKYLYVYGDMDEDG 58

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 2e-04
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 7/43 (16%)

Query: 227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +I V A +DY+A            LSF KGD + V+ +   +W
Sbjct: 4   RIIVVALYDYEAIHH-------EDLSFQKGDQMVVLEESGEWW 39

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 2e-04
 Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             A +DY+A ++         LSF+KG+   +++  +  W
Sbjct: 3   FVALYDYEAITE-------DDLSFHKGEKFQILNSSEGDW 35

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (83), Expect = 3e-04
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           V A   Y+ S D         L F KG+ L ++ Q   +W
Sbjct: 9   VIALHSYEPSHD-------GDLGFEKGEQLRILEQSGEWW 41

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (83), Expect = 4e-04
 Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           V A +D+ A+           L   +G    ++ ++D +W
Sbjct: 5   VVAMYDFQATEA-------HDLRLERGQEYIILEKNDLHW 37

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 4e-04
 Identities = 8/41 (19%), Positives = 16/41 (39%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
              A + Y +            L+F +G+ + V  +D  +W
Sbjct: 10  EYIALYPYSSVEP-------GDLTFTEGEEILVTQKDGEWW 43

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.6 bits (82), Expect = 5e-04
 Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           ++    +Y     P        L  N GDI+ +   +  + 
Sbjct: 6   KMEVFQEYYGIP-PPPGAFGPFLRLNPGDIVELTKAEAEHN 45

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 6e-04
 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +V A +DY A+++         LSF+KG +++V+++DD  W
Sbjct: 36  QVIAMYDYAANNE-------DELSFSKGQLINVMNKDDPDW 69

>d1k32a1 b.36.1.3 (A:763-853) Tricorn protease {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 91

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: Tail specific protease PDZ domain
domain: Tricorn protease
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 35.8 bits (82), Expect = 7e-04
 Identities = 12/93 (12%), Positives = 27/93 (29%), Gaps = 13/93 (13%)

Query: 147 LGATIKTDEESGKIVVARVMH--------GGAADRSGLIHVGDEVCEVNGINVEGKTPGD 198
           +    K D      VVA+                  G+   G  + +++G  V   +   
Sbjct: 3   IACDFKLDG--DHYVVAKAYAGDYSNEGEKSPIFEYGIDPTGYLIEDIDGETVGAGSN-I 59

Query: 199 VLKILQSSEGTITFKLIPADNKLGYRESKIRVR 231
              + + +  +   +L         R+  I + 
Sbjct: 60  YRVLSEKAGTSARIRLSGKGGDK--RDLMIDIL 90

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.7 bits (80), Expect = 8e-04
 Identities = 7/41 (17%), Positives = 16/41 (39%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +  A + +              L F KGD++ ++ + D+  
Sbjct: 3   KAVALYSFAGEES-------GDLPFRKGDVITILKKSDSQN 36

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 0.001
 Identities = 8/38 (21%), Positives = 18/38 (47%), Gaps = 7/38 (18%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD 266
            + A +DY+  +D         L   +GD + ++ ++D
Sbjct: 6   VIYALWDYEPQND-------DELPMKEGDCMTIIHRED 36

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 0.001
 Identities = 8/41 (19%), Positives = 13/41 (31%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           + +A +   A  D       + LSF  G +   V       
Sbjct: 12  KAKALYACKAEHD-------SELSFTAGTVFDNVHPSQEPG 45

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 0.001
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             A +DY++ ++         LSF KG+ L +V+  +  W
Sbjct: 5   FVALYDYESRTE-------TDLSFKKGERLQIVNNTEGDW 37

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 34.6 bits (79), Expect = 0.001
 Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +V+A  DY A+           L    GD++ V+   +   
Sbjct: 14  KVQAQHDYTATDT-------DELQLKAGDVVLVIPFQNPEE 47

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (79), Expect = 0.002
 Identities = 7/45 (15%), Positives = 13/45 (28%), Gaps = 7/45 (15%)

Query: 225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           E      A + + A +          LS +    L ++   D   
Sbjct: 11  EGNQVYFAVYTFKARNP-------NELSVSANQKLKILEFKDVTG 48

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 59

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.7 bits (77), Expect = 0.002
 Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           K   ++ +D+ A +        + LS  K D+L ++     +W
Sbjct: 1   KKYAKSKYDFVARNS-------SELSVMKDDVLEILDDRRQWW 36

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 33.3 bits (76), Expect = 0.002
 Identities = 6/40 (15%), Positives = 15/40 (37%), Gaps = 7/40 (17%)

Query: 230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           V A +DY  +           L+    +  +++   + +W
Sbjct: 1   VIALYDYQTND-------PQELALRCDEEYYLLDSSEIHW 33

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (77), Expect = 0.003
 Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 7/44 (15%)

Query: 226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           S     A +++  +++         L F KGD+L +V+      
Sbjct: 5   SGTECIAKYNFHGTAE-------QDLPFCKGDVLTIVAVTKDPN 41

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.003
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
             RA + ++A +          +SFN GDI+ V  +     
Sbjct: 7   GYRALYPFEARNH-------DEMSFNSGDIIQVDEKTVGEP 40

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (75), Expect = 0.004
 Identities = 6/41 (14%), Positives = 18/41 (43%), Gaps = 7/41 (17%)

Query: 229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
            V+  + + + ++         L+F KG+ + V+ + +   
Sbjct: 8   VVQTLYPFSSVTE-------EELNFEKGETMEVIEKPENDP 41

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (75), Expect = 0.004
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 7/42 (16%)

Query: 228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW 269
           +   A +D+ A++D         LSF +GDIL V++++    
Sbjct: 1   MEAIAKYDFKATAD-------DELSFKRGDILKVLNEECDQN 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	269
d1kwaa_	88	Cask/Lin-2 {Human (Homo sapiens) [TaxId: 9606]}	99.78
d2fe5a1	92	Synapse-associated protein 102 {Human (Homo sapien	99.77
d1g9oa_	91	Na+/H+ exchanger regulatory factor, NHERF {Human (	99.77
d2fcfa1	96	Multiple PDZ domain protein {Human (Homo sapiens)	99.77
d1va8a1	100	Maguk p55 subfamily member 5 {Mouse (Mus musculus)	99.76
d1tp5a1	102	Synaptic protein PSD-95 {Rat (Rattus norvegicus) [	99.76
d1qava_	90	Syntrophin {Mouse (Mus musculus) [TaxId: 10090]}	99.75
d1rzxa_	98	GTPase-binding domain of the cell polarity protein	99.75
d1rgra_	93	Synaptic protein PSD-95 {Rat (Rattus norvegicus) [	99.75
d1ihja_	94	Inad {Fruit fly (Drosophila melanogaster) [TaxId:	99.75
d2fnea1	88	Multiple PDZ domain protein {Human (Homo sapiens)	99.74
d1n7ea_	95	Glutamate receptor-interacting protein 1, GRIP1 {R	99.74
d1uhpa_	107	Hypothetical protein KIAA1095 {Human (Homo sapiens	99.73
d1wf8a1	94	Neurabin-i {Human (Homo sapiens) [TaxId: 9606]}	99.73
d1ozia_	99	Phosphatase hPTP1e {Mouse (Mus musculus) [TaxId: 1	99.73
d1um1a_	110	Hypothetical protein KIAA1849 {Human (Homo sapiens	99.73
d1t2ma1	92	Afadin {Human (Homo sapiens) [TaxId: 9606]}	99.72
d1r6ja_	82	Syntenin 1 {Human (Homo sapiens) [TaxId: 9606]}	99.72
d1m5za_	91	Glutamate receptor interacting protein {Rat (Rattu	99.72
d1whaa_	105	Scribble (KIAA0147) {Human (Homo sapiens) [TaxId:	99.72
d1x6da1	107	Interleukin 16 {Human (Homo sapiens) [TaxId: 9606]	99.71
d1ujua_	111	Scribble (KIAA0147) {Human (Homo sapiens) [TaxId:	99.71
d1p1da2	99	Glutamate receptor interacting protein {Rat (Rattu	99.71
d1i16a_	130	Interleukin 16 {Human (Homo sapiens) [TaxId: 9606]	99.7
d1qaua_	112	Neuronal nitric oxide synthase, NNOS {Rat (Rattus	99.7
d1y7na1	79	Amyloid beta A4 precursor protein-binding family A	99.7
d1uewa_	114	Membrane associated guanylate kinase inverted-2 (M	99.69
d2f0aa1	92	Segment polarity protein dishevelled homolog Dvl-2	99.69
d1q3oa_	104	Shank1, PDZ domain {Rat (Rattus norvegicus) [TaxId	99.69
d1rgwa_	85	Zasp (Cypher, Oracle 1) {Human (Homo sapiens) [Tax	99.68
d2f5ya1	77	Regulator of G-protein signaling 3, RGS3 {Human (H	99.68
d1wi2a_	104	PDZ domain containing protein 11, Pdzk11 {Mouse (M	99.68
d1v62a_	117	Glutamate receptor interacting protein 2, GRIP2 (K	99.68
d1x5qa1	97	Scribble (KIAA0147) {Human (Homo sapiens) [TaxId:	99.67
d1x45a1	85	Amyloid beta A4 precursor protein-binding family A	99.67
d1uita_	117	Discs large 5 protein KIAA0583 {Human (Homo sapien	99.66
d1wfva_	103	Membrane associated guanylate kinase inverted-2 (M	99.66
d1uepa_	103	Membrane associated guanylate kinase inverted-2 (M	99.65
d1wi4a1	96	Syntaxin binding protein 4 {Mouse (Mus musculus) [	99.65
d1uf1a_	128	KIAA1526 protein {Human (Homo sapiens) [TaxId: 960	99.65
d1ueqa_	123	Membrane associated guanylate kinase inverted-2 (M	99.64
d1vb7a_	94	PDZ-LIM protein mystique {Mouse (Mus musculus) [Ta	99.64
d1w9ea1	85	Syntenin 1 {Human (Homo sapiens) [TaxId: 9606]}	99.64
d2h3la1	103	Erbin {Human (Homo sapiens) [TaxId: 9606]}	99.64
d2cs5a1	106	Tyrosine-protein phosphatase non-receptor type 4,	99.64
d1v6ba_	118	Harmonin {Mouse (Mus musculus) [TaxId: 10090]}	99.63
d1x5na1	101	Harmonin {Human (Homo sapiens) [TaxId: 9606]}	99.63
d1vaea_	111	Rhophilin-2 {Mouse (Mus musculus) [TaxId: 10090]}	99.62
d1ueza_	101	KIAA1526 protein {Human (Homo sapiens) [TaxId: 960	99.61
d1ujda_	117	Hypothetical protein KIAA0559 {Human (Homo sapiens	99.61
d1ufxa_	103	KIAA1526 protein {Human (Homo sapiens) [TaxId: 960	99.6
d1v5qa_	122	Glutamate receptor interacting protein {Mouse (Mus	99.6
d1x5ra1	99	Glutamate receptor interacting protein 2, GRIP2 (K	99.6
d1wg6a_	127	Partitioning-defective 3-like protein, PAR3-L (RIK	99.6
d2cssa1	108	Regulating synaptic membrane exocytosis protein 1,	99.59
d2csja1	104	Tight junction protein ZO-2, Tjp2 {Mouse (Mus musc	99.59
d1v5la_	103	Alpha-actinin-2 associated LIM protein {Mouse (Mus	99.56
d1wifa_	126	hypothetical PDZ domain containing protein Uqcrc2	99.56
d1wf7a_	103	Enigma homolog ENH {Mouse (Mus musculus) [TaxId: 1	99.56
d1wh1a_	124	Hypothetical protein KIAA1095 {Human (Homo sapiens	99.46
d1ujva_	96	Membrane associated guanylate kinase inverted-2 (M	99.41
d1fc6a3	92	Photosystem II D1 C-terminal processing protease {	99.36
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	99.33
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	99.33
d1y74b1	50	Peripheral plasma membrane protein cask {Human (Ho	99.31
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	99.28
d2z9ia1	88	Protease PepD {Mycobacterium tuberculosis [TaxId:	99.08
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	98.94
d1ky9b2	88	Protease Do (DegP, HtrA), C-terminal domains {Esch	98.93
d1k32a1	91	Tricorn protease {Archaeon Thermoplasma acidophilu	98.87
d1rsob_	56	Peripheral plasma membrane protein cask {Rat (Ratt	98.81
d1lcya1	100	Mitochondrial serine protease HtrA2 {Human (Homo s	98.71
d2i6va1	87	General secretion pathway protein C, EpsC {Vibrio	98.46
d2hgaa1	103	Uncharacterized protein MTH1368 {Methanobacterium	98.45
d1ky9a1	94	Protease Do (DegP, HtrA), C-terminal domains {Esch	98.39
d1sota1	99	Stress sensor protease DegS, C-terminal domain {Es	98.36
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	98.22
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	98.12
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	98.1
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	98.08
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	98.02
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	97.99
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	97.99
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	97.98
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	97.95
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	97.94
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	97.86
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	97.82
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	97.76
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.76
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	97.73
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.72
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	97.68
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	97.68
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	97.67
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.66
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	97.65
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	97.64
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	97.64
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	97.63
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	97.62
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	97.61
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	97.58
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	97.54
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.52
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	97.52
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	97.51
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	97.45
d1vf6c_	51	Maguk p55 subfamily member 5, Patj {Mouse (Mus mus	97.42
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	97.36
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	97.33
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	97.31
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	97.3
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	97.3
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	97.29
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	97.21
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.14
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	97.12
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	97.06
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	96.87
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	96.55
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	95.82
d1vf6a_	58	Associated tight junction protein Pals-1 {Human (H	95.65
d1y74b1	50	Peripheral plasma membrane protein cask {Human (Ho	93.95
d1rsob_	56	Peripheral plasma membrane protein cask {Rat (Ratt	84.31

>d1kwaa_ b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Cask/Lin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=6.5e-19  Score=129.59  Aligned_cols=83  Identities=45%  Similarity=0.808  Sum_probs=77.3

Q ss_pred             eEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      .|.|.++| .+++|||+|+++.. ++++|.+|.+||+|+++|.|++||+|++|||.++.++++++++++|++++++++|+
T Consensus         2 ~R~V~l~k~~~~~lG~~l~~~~~-~~~~I~~v~~gg~A~~~g~l~~GD~Il~INg~~v~~~~~~~~~~ll~~~~~~v~L~   80 (88)
T d1kwaa_           2 SRLVQFQKNTDEPMGITLKMNEL-NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFK   80 (88)
T ss_dssp             CEEEEEEECSSSCCCEEEECSCG-GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEE
T ss_pred             cEEEEEEeCCCCCccEEEEEcCC-CCEEEEEECCCCHHHHcCCCccCcEEEEECCEECCCCCHHHHHHHHHcCCCcEEEE
Confidence            48899999 88899999998753 58999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCC
Q psy14174        214 LIPAD  218 (269)
Q Consensus       214 v~p~~  218 (269)
                      |.|+.
T Consensus        81 i~p~~   85 (88)
T d1kwaa_          81 IVPSY   85 (88)
T ss_dssp             EECCC
T ss_pred             EEeCC
Confidence            99853

>d2fe5a1 b.36.1.1 (A:223-314) Synapse-associated protein 102 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Synapse-associated protein 102
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.2e-18  Score=127.72  Aligned_cols=84  Identities=23%  Similarity=0.437  Sum_probs=76.4

Q ss_pred             eEEEEEeeCCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      +..|.|.|+..+|||+|+++.+      ..++||.+|.+||||+++|.|++||+|++|||+++.+++|++++++|+++++
T Consensus         2 v~~V~L~k~~~glG~~i~gg~~~~~~~~~~gi~I~~v~~gg~A~~~G~L~~GD~Il~VNg~~v~~~~~~e~~~~lk~~~~   81 (92)
T d2fe5a1           2 IMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSD   81 (92)
T ss_dssp             EEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCCS
T ss_pred             EEEEEEEECCCccCEEEEeecCCccCCCCCCEEEEEECCCCChhhcCCCCCCCEEEEeCCeecCCCCHHHHHHHHHcCCC
Confidence            5679999977899999997632      3489999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .++|+|.+.+
T Consensus        82 ~v~L~v~Rpg   91 (92)
T d2fe5a1          82 MVYLKVAKPG   91 (92)
T ss_dssp             EEEEEEECCC
T ss_pred             EEEEEEECCC
Confidence            9999998743

>d1g9oa_ b.36.1.1 (A:) Na+/H+ exchanger regulatory factor, NHERF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Na+/H+ exchanger regulatory factor, NHERF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.5e-18  Score=127.23  Aligned_cols=83  Identities=22%  Similarity=0.358  Sum_probs=77.6

Q ss_pred             eEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      +|.|.|.|+..+|||+|.++....++||.+|.+||+|+++| |++||+|++|||+++.+++|++++.+|+++++.++|+|
T Consensus         4 Pr~v~l~k~~~g~Gf~i~~~~~~~~~~V~~V~~g~~A~~aG-l~~GD~Il~VNg~~v~~~t~~e~~~ll~~~~~~v~L~v   82 (91)
T d1g9oa_           4 PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLV   82 (91)
T ss_dssp             CEEEEEECBTTBCCEEEEECTTCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred             CEEEEEEECCCeeeEEEEecCCCCCEEEEEEcCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence            48899999888899999998767799999999999999999 79999999999999999999999999999999999999


Q ss_pred             EeCC
Q psy14174        215 IPAD  218 (269)
Q Consensus       215 ~p~~  218 (269)
                      .+..
T Consensus        83 ~~~~   86 (91)
T d1g9oa_          83 VDPE   86 (91)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            8743

>d2fcfa1 b.36.1.1 (A:1148-1243) Multiple PDZ domain protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Multiple PDZ domain protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.3e-18  Score=129.92  Aligned_cols=82  Identities=18%  Similarity=0.413  Sum_probs=72.8

Q ss_pred             eEEEEEee-CCCCCCeEEeccCC----------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHH
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEE----------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL  203 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~----------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l  203 (269)
                      +|.|.|.| .+++|||+|+++..          ..++||++|.+||||+++|.|++||+|++|||+++.+++|++++++|
T Consensus         2 pr~V~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gi~V~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~t~~ea~~~l   81 (96)
T d2fcfa1           2 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI   81 (96)
T ss_dssp             CEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred             CEEEEEEeCCCCCCCEEEEcccCCCcccccccCCCCEEEEEECCCCHHHHcCCCcCCCEEEEECCEECCCCCHHHHHHHH
Confidence            58899999 68899999987632          23899999999999999998899999999999999999999999999


Q ss_pred             HcCCCeEEEEEEe
Q psy14174        204 QSSEGTITFKLIP  216 (269)
Q Consensus       204 ~~~~~~v~l~v~p  216 (269)
                      +++++.++|+|.+
T Consensus        82 k~~~~~v~L~V~r   94 (96)
T d2fcfa1          82 RKAGNPVVFMVQS   94 (96)
T ss_dssp             HTCCSSEEEEEEC
T ss_pred             HcCCCeEEEEEEE
Confidence            9999999999976

>d1va8a1 b.36.1.1 (A:8-107) Maguk p55 subfamily member 5 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Maguk p55 subfamily member 5
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=1.7e-18  Score=130.25  Aligned_cols=84  Identities=48%  Similarity=0.876  Sum_probs=78.4

Q ss_pred             CCceEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        132 EETVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       132 ~~~~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      .+.+++|.+.| .+++|||+++++  ..+++|.+|.+||+|+++|.|++||+|++|||+++.++++++++++|+++++++
T Consensus        16 ~~~i~~V~l~k~~~~~lG~~v~~~--~~~i~I~~V~~gs~A~~~g~l~~GD~Il~VNg~~v~~~~~~~~~~ll~~~~~~v   93 (100)
T d1va8a1          16 GETVKIVRIEKARDIPLGATVRNE--MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTL   93 (100)
T ss_dssp             TEECEEEEEEECTTCCCCEEEEEC--SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEE
T ss_pred             CceEEEEEEEeCCCCCccEEEEec--CCCEEEEEECCCChhhhhcccCccCEEEEECCEEEcCCCHHHHHHHHHcCCCeE
Confidence            35789999999 678999999987  468999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeC
Q psy14174        211 TFKLIPA  217 (269)
Q Consensus       211 ~l~v~p~  217 (269)
                      +|+|.|+
T Consensus        94 ~L~v~P~  100 (100)
T d1va8a1          94 TFVLIPS  100 (100)
T ss_dssp             EEEEECC
T ss_pred             EEEEEcC
Confidence            9999984

>d1tp5a1 b.36.1.1 (A:302-403) Synaptic protein PSD-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Synaptic protein PSD-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=3.5e-18  Score=128.99  Aligned_cols=84  Identities=23%  Similarity=0.370  Sum_probs=78.5

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      .+|.|.|.|++.+|||+|+++....++||..|.+||+|+++|.|++||+|++|||+++.+++|++++.+|+++++.++|+
T Consensus         9 ~~r~V~l~k~~~glG~~i~~~~~~~gv~V~~v~~gs~A~~~G~l~~GD~Il~INg~~v~~~~~~ev~~~l~~~~~~v~L~   88 (102)
T d1tp5a1           9 EPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII   88 (102)
T ss_dssp             SCEEEEEECTTSCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEE
T ss_pred             CCEEEEEEeCCCcccEEEEeccCCCCEEEEEecCCchHHHcCCCcccCEEEEECCeEcCCCCHHHHHHHHHcCCCeEEEE
Confidence            45899999988899999999876679999999999999999989999999999999999999999999999999999999


Q ss_pred             EEeC
Q psy14174        214 LIPA  217 (269)
Q Consensus       214 v~p~  217 (269)
                      +.+.
T Consensus        89 v~~~   92 (102)
T d1tp5a1          89 AQYK   92 (102)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            9764

>d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Syntrophin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=3.6e-18  Score=126.08  Aligned_cols=83  Identities=24%  Similarity=0.406  Sum_probs=75.9

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ..|.|.|.| .+++|||+|+++.+. .++||++|.+||+|+++|.|++||+|++|||+++.+++|++++.+|+++++.++
T Consensus         4 q~r~V~l~k~~~~~lG~~i~gg~~~~~~i~V~~V~~~~~A~~~G~L~~GD~Il~INg~~v~~~~~~~~~~~l~~~~~~v~   83 (90)
T d1qava_           4 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVV   83 (90)
T ss_dssp             SCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred             eEEEEEEEeCCCCccCEEEEccccCCCCEEEEEEcCCCceeeCCCCCccCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence            458899999 677999999987433 489999999999999999899999999999999999999999999999999999


Q ss_pred             EEEEe
Q psy14174        212 FKLIP  216 (269)
Q Consensus       212 l~v~p  216 (269)
                      |+|.+
T Consensus        84 l~v~~   88 (90)
T d1qava_          84 LEVKY   88 (90)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            99975

>d1rzxa_ b.36.1.1 (A:) GTPase-binding domain of the cell polarity protein par6 (Par-6B) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: GTPase-binding domain of the cell polarity protein par6 (Par-6B)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.75  E-value=2.4e-18  Score=128.98  Aligned_cols=84  Identities=38%  Similarity=0.630  Sum_probs=75.4

Q ss_pred             ceEEEEEee--CCCCCCeEEeccCC----------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHH
Q psy14174        134 TVKIVQLVK--SNEPLGATIKTDEE----------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLK  201 (269)
Q Consensus       134 ~~r~V~l~k--~~~~lG~ti~~~~~----------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~  201 (269)
                      ..|.|+|.|  +.++|||+|+++..          ..++||+.|.+||+|+++|+|++||+|++|||+++.+++|++++.
T Consensus         2 ~~r~V~L~k~~~~~~lG~~i~gg~~~~~~~~~~~~~~gi~I~~v~~gg~A~~~G~l~~GD~Il~VNg~~v~~~~~~~~~~   81 (98)
T d1rzxa_           2 THRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTGLLAVNDEVIEVNGIEVAGKTLDQVTD   81 (98)
T ss_dssp             CCEEEEEECCCSSSCCSEEEEEEEEEECCSSSCEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred             CcEEEEEEECCCCCcccEEEecccCCCccccCccCCCCEEEEEECCCChHHhcCcCCCCcEEeeECCEECCCCCHHHHHH
Confidence            457788988  45789999987631          237999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCeEEEEEEeC
Q psy14174        202 ILQSSEGTITFKLIPA  217 (269)
Q Consensus       202 ~l~~~~~~v~l~v~p~  217 (269)
                      +|+++++.++|+|.|+
T Consensus        82 ~l~~~~~~v~l~v~p~   97 (98)
T d1rzxa_          82 MMVANSSNLIITVKPA   97 (98)
T ss_dssp             HHHHTCTEEEEEEECC
T ss_pred             HHHcCCCeEEEEEEeC
Confidence            9999999999999985

>d1rgra_ b.36.1.1 (A:) Synaptic protein PSD-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Synaptic protein PSD-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=3.1e-18  Score=127.08  Aligned_cols=83  Identities=22%  Similarity=0.400  Sum_probs=76.0

Q ss_pred             eEEEEEeeCCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ++.|.|.|++.+|||+|.++.+      ..++||++|.+||+|+++|.|++||+|++|||+++.+++|++++++|+++++
T Consensus         2 ~~~V~l~k~~~glG~~i~gg~~~~~~~~~~gi~I~~V~~gg~A~~~G~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~   81 (93)
T d1rgra_           2 YEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGS   81 (93)
T ss_dssp             EEEEEEECCSSCCSEEECCCSSSCSCTTCCCCCEEEECTTSHHHHHCCCCTTCEEEEETTEECSSSCHHHHHHHHHHTTT
T ss_pred             CEEEEEEeCCCcCCEEEEeecCCCCcCCCCCEEEEEECCCChHHhcCCCCcCcEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence            5788999988899999997642      2489999999999999999889999999999999999999999999999999


Q ss_pred             eEEEEEEeC
Q psy14174        209 TITFKLIPA  217 (269)
Q Consensus       209 ~v~l~v~p~  217 (269)
                      .++|+|.+.
T Consensus        82 ~v~L~v~R~   90 (93)
T d1rgra_          82 IVRLYVMRR   90 (93)
T ss_dssp             EEEEEEECS
T ss_pred             EEEEEEEeC
Confidence            999999874

>d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Inad
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.75  E-value=3.9e-18  Score=126.79  Aligned_cols=84  Identities=23%  Similarity=0.411  Sum_probs=76.3

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCC-------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHH
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEE-------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQ  204 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~-------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~  204 (269)
                      +.+++|.|.| ++++|||+|.++..       ..++||.+|.+||||+++|.|++||+|++|||+++.+++|++++++|+
T Consensus         2 e~i~~V~L~k~~~~~lG~~i~gg~~~~~~~~~~~gi~I~~v~~gs~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ll~   81 (94)
T d1ihja_           2 ELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK   81 (94)
T ss_dssp             CEEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred             CEEEEEEEEeCCCCCcCEEEeccccCCCCccCCCCEEEEEECCCCHHHHhCCCChhcEEEEECCEECCCCCHHHHHHHHH
Confidence            4578999999 67899999987631       227999999999999999989999999999999999999999999999


Q ss_pred             cCCCeEEEEEEe
Q psy14174        205 SSEGTITFKLIP  216 (269)
Q Consensus       205 ~~~~~v~l~v~p  216 (269)
                      ++++.++|+|.+
T Consensus        82 ~~~~~v~L~V~R   93 (94)
T d1ihja_          82 EADFKIELEIQT   93 (94)
T ss_dssp             HSCSEEEEEEEE
T ss_pred             cCCCEEEEEEEe
Confidence            999999999976

>d2fnea1 b.36.1.1 (A:1955-2042) Multiple PDZ domain protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Multiple PDZ domain protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.1e-18  Score=125.25  Aligned_cols=82  Identities=30%  Similarity=0.469  Sum_probs=75.0

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      .+|+|.|.|...+|||+|.++.+    ..++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++++|+++++.
T Consensus         2 ~~~~V~l~K~~~~lG~~i~~g~~~~~~~~~i~I~~v~~~g~A~~~g~l~~GD~Il~INg~~v~~~~~~~v~~~l~~~~~~   81 (88)
T d2fnea1           2 QCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGT   81 (88)
T ss_dssp             EEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSS
T ss_pred             eEEEEEEEeCCCccCEEEEeccCCCCCCcCEEEEEEcCCChHHHhCCCcCCcEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence            47899999977789999997632    23899999999999999998999999999999999999999999999999999


Q ss_pred             EEEEEE
Q psy14174        210 ITFKLI  215 (269)
Q Consensus       210 v~l~v~  215 (269)
                      ++|+|+
T Consensus        82 v~L~Vl   87 (88)
T d2fnea1          82 VTLMVL   87 (88)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            999986

>d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1, GRIP1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor-interacting protein 1, GRIP1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=1.5e-17  Score=123.80  Aligned_cols=85  Identities=31%  Similarity=0.560  Sum_probs=77.5

Q ss_pred             ceEEEEEeeCCCCCCeEEeccC-CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDE-ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~-~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      .+.+|.|.|.+++|||+|+++. ...++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++.+|+++++.++|
T Consensus         3 ~i~tV~l~k~~~~lG~~i~g~~~~~~~v~I~~I~~g~~A~~~g~L~~GD~Il~INg~~v~~~~~~ev~~~l~~~~~~v~l   82 (95)
T d1n7ea_           3 IIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTL   82 (95)
T ss_dssp             CEEEEEEECTTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEE
T ss_pred             EEEEEEEEECCCcEeEEEEecccCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence            4677899998889999999774 335899999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCC
Q psy14174        213 KLIPAD  218 (269)
Q Consensus       213 ~v~p~~  218 (269)
                      +|.+..
T Consensus        83 ~v~r~~   88 (95)
T d1n7ea_          83 KIKKQT   88 (95)
T ss_dssp             EEECCC
T ss_pred             EEEECC
Confidence            999854

>d1uhpa_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Hypothetical protein KIAA1095
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.7e-17  Score=126.16  Aligned_cols=85  Identities=20%  Similarity=0.369  Sum_probs=76.9

Q ss_pred             CceEEEEEeeCCCCCCeEEeccC---------CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHH
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDE---------ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKIL  203 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~---------~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l  203 (269)
                      .....|.|.|...+|||+|.++.         ...++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++++|
T Consensus         7 g~~~~V~l~k~~~~lGf~i~GG~~~~~~~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNg~~v~~~t~~eav~~l   86 (107)
T d1uhpa_           7 GKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAF   86 (107)
T ss_dssp             SEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHH
T ss_pred             CCEEEEEEEECCCccCEEEEecccCCCcccccCCCCEEEEEECCCCHHHHhCCCcceeEEeEECCEECCCCCHHHHHHHH
Confidence            44678899997789999999863         234899999999999999998999999999999999999999999999


Q ss_pred             HcCCCeEEEEEEeC
Q psy14174        204 QSSEGTITFKLIPA  217 (269)
Q Consensus       204 ~~~~~~v~l~v~p~  217 (269)
                      ++++..++|+|.+.
T Consensus        87 k~~~~~v~l~v~r~  100 (107)
T d1uhpa_          87 KTAKEPIVVQVLRR  100 (107)
T ss_dssp             HHCCSSEEEEEEEC
T ss_pred             HhCCCcEEEEEEEC
Confidence            99999999999874

>d1wf8a1 b.36.1.1 (A:8-101) Neurabin-i {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Neurabin-i
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=9e-18  Score=124.82  Aligned_cols=83  Identities=34%  Similarity=0.483  Sum_probs=74.7

Q ss_pred             eEEEEEeeCCCCCCeEEeccC-------CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        135 VKIVQLVKSNEPLGATIKTDE-------ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~-------~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      +..|.|.|+..+|||+|.++.       ...++||++|.+||||+++|+|++||+|++|||+++.+++|++++++|++++
T Consensus         3 ~~~V~L~k~~~glG~~i~g~~~~~~~~~~~~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~   82 (94)
T d1wf8a1           3 LFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTK   82 (94)
T ss_dssp             EEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHCC
T ss_pred             EEEEEEEeCCCCcCEEEEeccCCCCCCcCCCCEEEEEECCCChHHHcCCCCcCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence            467899997789999998742       2237999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEEEeC
Q psy14174        208 GTITFKLIPA  217 (269)
Q Consensus       208 ~~v~l~v~p~  217 (269)
                      +.++|+|.+.
T Consensus        83 ~~v~L~V~R~   92 (94)
T d1wf8a1          83 GNVRFVIGRE   92 (94)
T ss_dssp             SEEEEEEEEE
T ss_pred             CeEEEEEEeC
Confidence            9999999873

>d1ozia_ b.36.1.1 (A:) Phosphatase hPTP1e {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Phosphatase hPTP1e
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=2e-17  Score=123.95  Aligned_cols=84  Identities=30%  Similarity=0.455  Sum_probs=75.4

Q ss_pred             ceEEEEEeeCCCCCCeEEeccC---------CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHH
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDE---------ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQ  204 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~---------~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~  204 (269)
                      ..+.|.|.|...+|||+|.+..         ...++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++.+|+
T Consensus         4 ~~~~V~L~k~~~~lG~~i~~~~~~~g~~~~~~~~~i~V~~V~~gg~A~~~G~L~~GD~Il~VNg~~v~~~s~~~a~~~lk   83 (99)
T d1ozia_           4 DTFEVELAKTDGSLGISVTVLFDKGGVNTSVRHGGIYVKAIIPKGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLR   83 (99)
T ss_dssp             CEEEEEEECCSSSCSEEEESCCSSSCSSCSSSCCCEEEEEECSSSHHHHHTCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred             CEEEEEEEECCCCCcEEEEeeccCCCcccccCCCCEEEEEECCCChHHhcCCCCccCEEEEECCEEcCCCCHHHHHHHHH
Confidence            3577999997779999998642         1247999999999999999989999999999999999999999999999


Q ss_pred             cCCCeEEEEEEeC
Q psy14174        205 SSEGTITFKLIPA  217 (269)
Q Consensus       205 ~~~~~v~l~v~p~  217 (269)
                      +++..++|+|.+.
T Consensus        84 ~~~~~v~L~v~R~   96 (99)
T d1ozia_          84 NTGQVVHLLLEKG   96 (99)
T ss_dssp             HSCSEEEEEEECC
T ss_pred             CCCCeEEEEEEeC
Confidence            9999999999874

>d1um1a_ b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Hypothetical protein KIAA1849
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.1e-17  Score=126.22  Aligned_cols=86  Identities=20%  Similarity=0.323  Sum_probs=78.3

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ..++.|.|.|...+|||+|.++.+    ..++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++++|++++.
T Consensus         7 g~~~~V~l~k~~~glG~~i~~~~~~~~~~~~i~V~~v~~gg~A~~~G~L~~GD~Il~INg~~v~~~~~~ev~~llk~~~~   86 (110)
T d1um1a_           7 GYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGK   86 (110)
T ss_dssp             CCEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCS
T ss_pred             CCEEEEEEEECCCCCCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCccCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence            458999999977899999988743    2379999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEeCC
Q psy14174        209 TITFKLIPAD  218 (269)
Q Consensus       209 ~v~l~v~p~~  218 (269)
                      .+.|+|.+..
T Consensus        87 ~v~l~v~r~~   96 (110)
T d1um1a_          87 KMRFLVAKSD   96 (110)
T ss_dssp             EEEEEEECCC
T ss_pred             eEEEEEEeCC
Confidence            9999998753

>d1t2ma1 b.36.1.1 (A:2-93) Afadin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Afadin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3e-17  Score=121.51  Aligned_cols=83  Identities=24%  Similarity=0.404  Sum_probs=73.2

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      .+..|.+.|. .+|||+|.++.+    ..++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++.+|+++++.
T Consensus         4 ei~~v~l~~~-~glG~~i~g~~~~~~~~~gi~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~v~~~s~~ea~~~l~~~~~~   82 (92)
T d1t2ma1           4 EIITVTLKKQ-NGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSV   82 (92)
T ss_dssp             EEEEEEEECS-SSCCEEEEEECCSSCCSCEEEEEEECTTSHHHHHTCCCSSEEEEEETTEECTTCCHHHHHHHHHSCCSE
T ss_pred             eEEEEEEeCC-CccCEEEEeecCCCCCCCCEEEEEEcCCChHHhcCCCCcccEeeeeCCeecCCCCHHHHHHHHHcCCCe
Confidence            4556677664 479999988743    23899999999999999998999999999999999999999999999999999


Q ss_pred             EEEEEEeC
Q psy14174        210 ITFKLIPA  217 (269)
Q Consensus       210 v~l~v~p~  217 (269)
                      ++|+|.+.
T Consensus        83 v~L~v~R~   90 (92)
T d1t2ma1          83 VTLEVAKQ   90 (92)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEeC
Confidence            99999875

>d1r6ja_ b.36.1.1 (A:) Syntenin 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Syntenin 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.9e-17  Score=120.07  Aligned_cols=77  Identities=26%  Similarity=0.506  Sum_probs=71.1

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      .+|+|+|+| ..++|||+++++      +|.+|.+||||+++| |++||+|++|||+++.+++|++++.+|+++++.++|
T Consensus         4 ~pr~V~l~k~~~g~~Gf~i~~g------~V~~v~~g~~A~~~G-l~~GD~Il~INg~~v~~~t~~~~~~ll~~~~~~v~l   76 (82)
T d1r6ja_           4 DPRTITMHKDSTGHVGFIFKNG------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI   76 (82)
T ss_dssp             CCEEEEEECCTTSCCCEEEETT------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEE
T ss_pred             CCEEEEEEeCCCCCcCEEEEEE------EEEEECCCChHHhcC-cCCCCEEEEeCCeEEeeCCHHHHHHHHHcCCCEEEE
Confidence            458999999 555799999865      599999999999999 799999999999999999999999999999999999


Q ss_pred             EEEeC
Q psy14174        213 KLIPA  217 (269)
Q Consensus       213 ~v~p~  217 (269)
                      +|.|+
T Consensus        77 ~v~p~   81 (82)
T d1r6ja_          77 TIMPA   81 (82)
T ss_dssp             EEEEC
T ss_pred             EEEcC
Confidence            99984

>d1m5za_ b.36.1.1 (A:) Glutamate receptor interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.72  E-value=5e-17  Score=120.05  Aligned_cols=83  Identities=18%  Similarity=0.225  Sum_probs=76.3

Q ss_pred             ceEEEEEee-C-CCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        134 TVKIVQLVK-S-NEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k-~-~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      .++.|.|.| . .++|||+|.++....++||..|.+||+|+++| |++||+|++|||.++.++++.+++.+|++++..++
T Consensus         6 e~~~v~l~k~~~~~~~Gf~i~~~~~~~g~~V~~V~~~g~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~   84 (91)
T d1m5za_           6 ELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLD   84 (91)
T ss_dssp             EEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEE
T ss_pred             ceEEEEEEECCCCCceeEEEeccCCCCCEEEEEECCCChhHhCc-CCCCCEEEEECCEECCCCCHHHHHHHHHCCCCEEE
Confidence            467889999 3 46899999988766799999999999999999 79999999999999999999999999999999999


Q ss_pred             EEEEeC
Q psy14174        212 FKLIPA  217 (269)
Q Consensus       212 l~v~p~  217 (269)
                      |+|.+.
T Consensus        85 L~v~R~   90 (91)
T d1m5za_          85 LVISRN   90 (91)
T ss_dssp             EEEEEC
T ss_pred             EEEEEC
Confidence            999874

>d1whaa_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Scribble (KIAA0147)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.8e-17  Score=124.56  Aligned_cols=86  Identities=29%  Similarity=0.480  Sum_probs=77.6

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCC-------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEE-------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~-------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      ...++|.|.|...+|||+|+++..       ..++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++.+|++
T Consensus         6 ~~~~~v~l~k~~~glGf~i~gg~~~~~~~~~~~gi~V~~v~~gs~A~~~G~L~~GD~Il~INg~~v~~~~~~ev~~~l~~   85 (105)
T d1whaa_           6 SGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTA   85 (105)
T ss_dssp             CEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTS
T ss_pred             CCCEEEEEEECCCccCEEEEeccCCcccccCCCCEEEEEEcCCCchhhcCCccCCCEEEEECCEEcCCCcHHHHHHHHHc
Confidence            346889999988899999998642       3479999999999999999899999999999999999999999999999


Q ss_pred             CCCeEEEEEEeCC
Q psy14174        206 SEGTITFKLIPAD  218 (269)
Q Consensus       206 ~~~~v~l~v~p~~  218 (269)
                      +++.++|+|.+..
T Consensus        86 ~~~~v~l~v~R~~   98 (105)
T d1whaa_          86 ASPTIALLLEREA   98 (105)
T ss_dssp             CCSCEEEEEEECC
T ss_pred             CCCeEEEEEEECC
Confidence            9999999998753

>d1x6da1 b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: Interleukin 16
domain: Interleukin 16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.7e-17  Score=126.19  Aligned_cols=86  Identities=27%  Similarity=0.431  Sum_probs=76.4

Q ss_pred             CCCceEEEEEee-CCCCCCeEEeccCC--CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        131 EEETVKIVQLVK-SNEPLGATIKTDEE--SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       131 ~~~~~r~V~l~k-~~~~lG~ti~~~~~--~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      +.+.+++|.+.| .+++|||+|.++.+  ..++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++.+|++++
T Consensus         5 ~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~i~V~~v~~gs~A~~~g~L~~GD~Il~VNg~~v~~~~~~ea~~~l~~~~   84 (107)
T d1x6da1           5 QLDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAR   84 (107)
T ss_dssp             SCTTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTT
T ss_pred             ccCCcEEEEEEcCCCCccCEEEeeccCCCCCCEEEEEECCCCHHHHcCCCCcCCEEEEECCEecCCCCHHHHHHHHHcCC
Confidence            346789999999 67899999998743  359999999999999999989999999999999999999999999999988


Q ss_pred             CeEEEEEEe
Q psy14174        208 GTITFKLIP  216 (269)
Q Consensus       208 ~~v~l~v~p  216 (269)
                      +.+.+++..
T Consensus        85 ~~~~l~v~~   93 (107)
T d1x6da1          85 EPRQAVIVT   93 (107)
T ss_dssp             SSSEEEEEE
T ss_pred             CCEEEEEEE
Confidence            777666654

>d1ujua_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Scribble (KIAA0147)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.4e-18  Score=129.85  Aligned_cols=87  Identities=28%  Similarity=0.391  Sum_probs=77.5

Q ss_pred             CCceEEEEEee-CCCCCCeEEeccCC----------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHH
Q psy14174        132 EETVKIVQLVK-SNEPLGATIKTDEE----------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVL  200 (269)
Q Consensus       132 ~~~~r~V~l~k-~~~~lG~ti~~~~~----------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~  200 (269)
                      ...+|.|.|.| .+++|||+|.++..          ..++||.+|.+||+|+++|+|++||+|++|||+++.+++|++++
T Consensus         7 g~~~~~V~l~k~~~~~lG~~i~gG~~~~~~~~~~~~~~gi~I~~v~~gg~A~~~G~L~~GD~Il~VNg~~v~~~t~~ea~   86 (111)
T d1ujua_           7 GPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAV   86 (111)
T ss_dssp             SCSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHH
T ss_pred             CCCeEEEEEEeCCCCccCEEEeccccCCcccccccCCCCEEEEEECCCChHHHcCCCccceeeeeeCCcccCCCCHHHHH
Confidence            34568899999 57899999997632          24899999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCeEEEEEEeCC
Q psy14174        201 KILQSSEGTITFKLIPAD  218 (269)
Q Consensus       201 ~~l~~~~~~v~l~v~p~~  218 (269)
                      ++|++++..++|+|.+..
T Consensus        87 ~~lk~~~~~v~L~V~r~~  104 (111)
T d1ujua_          87 QLLRSVGDTLTVLVCDGF  104 (111)
T ss_dssp             HHHSSCSSEEEECCCCCC
T ss_pred             HHHHcCCCeEEEEEEECC
Confidence            999999999999998753

>d1p1da2 b.36.1.1 (A:115-213) Glutamate receptor interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.71  E-value=3.1e-17  Score=122.99  Aligned_cols=84  Identities=25%  Similarity=0.441  Sum_probs=75.6

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      ....|.+.| .+.+|||++.++.+   ..++||++|.+||+|+++|.|++||+|++|||+++.+++|++++++|+++++.
T Consensus        10 ~~~~V~l~k~~~~~lG~~v~~~~~~~~~~~i~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~v~~~s~~e~~~ll~~~~~~   89 (99)
T d1p1da2          10 GTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDL   89 (99)
T ss_dssp             SCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTC
T ss_pred             CcEEEEEEECCCCccCEEEEecCCCCCCCCEEEEEEcCCchhhhcCCCCCCCEEEeeCCEECCCCCHHHHHHHHHcCCCe
Confidence            456688988 77899999987632   24799999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeC
Q psy14174        210 ITFKLIPA  217 (269)
Q Consensus       210 v~l~v~p~  217 (269)
                      ++|+|.+.
T Consensus        90 v~L~V~r~   97 (99)
T d1p1da2          90 VKLKIRKD   97 (99)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEEeC
Confidence            99999874

>d1i16a_ b.36.1.2 (A:) Interleukin 16 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: Interleukin 16
domain: Interleukin 16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.7e-17  Score=129.25  Aligned_cols=87  Identities=24%  Similarity=0.418  Sum_probs=77.1

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      +..++.|.|.|.+.+|||+|+++.+    ..++||.+|.+||+|+++|+|++||+|++|||+++.+++|++++++|++++
T Consensus        27 ~~~~~~V~l~k~~~glG~~i~gg~~~~~~~~~i~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~~~~~t~~eav~~l~~~~  106 (130)
T d1i16a_          27 EATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALP  106 (130)
T ss_dssp             SEEEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSC
T ss_pred             CCeEEEEEEEeCCCccCEEEeeccCCCCCCCCEEEEEECCCChHHhcCCcccCceeeeECCeecCCCcHHHHHHHHHcCC
Confidence            3457889999987899999998743    248999999999999999999999999999999999999999999999875


Q ss_pred             -CeEEEEEEeCC
Q psy14174        208 -GTITFKLIPAD  218 (269)
Q Consensus       208 -~~v~l~v~p~~  218 (269)
                       +.|+|+|.+..
T Consensus       107 ~~~v~l~v~r~~  118 (130)
T d1i16a_         107 DGPVTIVIRRKS  118 (130)
T ss_dssp             SSEEEEEEEEES
T ss_pred             CCeEEEEEEcCC
Confidence             58999998753

>d1qaua_ b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Neuronal nitric oxide synthase, NNOS
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.70  E-value=4.9e-17  Score=124.35  Aligned_cols=81  Identities=28%  Similarity=0.417  Sum_probs=72.6

Q ss_pred             eEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEE
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFK  213 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~  213 (269)
                      +..|.|.| .+.+|||+|.++.+..++||+.|.+||||+++|.|++||+|++|||+++.+++|++++.+|+++...+.+.
T Consensus         2 i~~V~l~k~~~~glG~~i~~~~~~~~i~I~~v~~ggpA~~~G~L~~GD~Il~INg~~v~~~s~~e~~~~l~~~~~~~~~~   81 (112)
T d1qaua_           2 VISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVV   81 (112)
T ss_dssp             EEEEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEE
T ss_pred             eEEEEEEECCCCcEeEEEEeecCCCCEEEEEEcCCCHHHHhhhcccccEeEEECCcCccCCCHHHHHHHHHcCCCCcEEE
Confidence            57789998 77899999998876779999999999999999988999999999999999999999999999987665555


Q ss_pred             EE
Q psy14174        214 LI  215 (269)
Q Consensus       214 v~  215 (269)
                      +.
T Consensus        82 l~   83 (112)
T d1qaua_          82 LI   83 (112)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1y7na1 b.36.1.1 (A:12-90) Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=6.3e-17  Score=116.44  Aligned_cols=76  Identities=30%  Similarity=0.590  Sum_probs=69.0

Q ss_pred             eEEEEEee--CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEE
Q psy14174        135 VKIVQLVK--SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITF  212 (269)
Q Consensus       135 ~r~V~l~k--~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l  212 (269)
                      +.+|.+.|  ...+|||+++++      +|.+|.+||+|+++| |++||+|++|||+++.+++|++++++|+++++.++|
T Consensus         1 V~tv~l~r~~~~~~lGf~i~~g------~V~~V~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~~~ll~~~~~~v~l   73 (79)
T d1y7na1           1 VTTVLIRRPDLRYQLGFSVQNG------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHM   73 (79)
T ss_dssp             CEEEEEEESSTTSCCCEEEETT------EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEE
T ss_pred             CEEEEEEcCCCCCCcCEEEECC------EEEEEcCCCHHHHCC-CCCCCEEEEECCEEeCCCCHHHHHHHHHcCCCEEEE
Confidence            35677888  457899999865      699999999999988 699999999999999999999999999999999999


Q ss_pred             EEEeC
Q psy14174        213 KLIPA  217 (269)
Q Consensus       213 ~v~p~  217 (269)
                      ++.|+
T Consensus        74 ~viP~   78 (79)
T d1y7na1          74 KTMPA   78 (79)
T ss_dssp             EEECC
T ss_pred             EEEcC
Confidence            99985

>d1uewa_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=9.4e-17  Score=123.26  Aligned_cols=85  Identities=25%  Similarity=0.465  Sum_probs=76.1

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCC--------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHH
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEE--------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQ  204 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~--------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~  204 (269)
                      ..+.|.|.| ++++|||+|+++..        ..++||.+|.+||+|+++|.|++||+|++|||+++.++++++++++|+
T Consensus        10 ~~~~V~l~r~~~~~lGf~l~~g~~~~~~~~~~~~~~~I~~I~~gg~A~~~G~L~~GD~Il~VNg~~v~~~~~~ev~~ll~   89 (114)
T d1uewa_          10 QTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIK   89 (114)
T ss_dssp             CCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHH
T ss_pred             eeEEEEEEeCCCCCCCEEEeeecccCCCCccCcCCEEEEEECCCCHHHhhccCCcCcEEeEeCCcccCCCcHHHHHHHHH
Confidence            356788988 67799999998632        236899999999999999989999999999999999999999999999


Q ss_pred             cCCCeEEEEEEeCC
Q psy14174        205 SSEGTITFKLIPAD  218 (269)
Q Consensus       205 ~~~~~v~l~v~p~~  218 (269)
                      +++..++|+|.|..
T Consensus        90 ~~~~~v~l~V~r~~  103 (114)
T d1uewa_          90 DAGLSVTLRIIPQE  103 (114)
T ss_dssp             HTTTEEEEEECCCS
T ss_pred             cCCCeEEEEEEeCC
Confidence            99999999998854

>d2f0aa1 b.36.1.1 (A:251-342) Segment polarity protein dishevelled homolog Dvl-2 {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Segment polarity protein dishevelled homolog Dvl-2
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.69  E-value=4.7e-17  Score=120.47  Aligned_cols=83  Identities=29%  Similarity=0.463  Sum_probs=73.1

Q ss_pred             eEEEEEee-CCCCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC---C
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS---E  207 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~---~  207 (269)
                      +.+|.|.| ...+|||+|.++.+   ..++||++|.+||||+++|.|++||+|++|||+++.+++|++++++|+++   .
T Consensus         2 i~tV~l~k~~~~~lGi~i~gg~~~~~~~~i~I~~I~~gg~A~~~G~L~~GD~Il~VNg~~l~~~s~~eav~llk~~~~~~   81 (92)
T d2f0aa1           2 IITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDIVHKP   81 (92)
T ss_dssp             EEEEEECHHHHCSCCEEEECCCCTTSCCCEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHHHHSS
T ss_pred             EEEEEEEeCCCCccCEEEEccCCCCCCCCEEEEEECCCCcHHHcCCCCCccEEEEECCEECCCCCHHHHHHHHHhccCCC
Confidence            45788999 67899999998753   24999999999999999999999999999999999999999999999863   5


Q ss_pred             CeEEEEEEeC
Q psy14174        208 GTITFKLIPA  217 (269)
Q Consensus       208 ~~v~l~v~p~  217 (269)
                      +.++|+|.+.
T Consensus        82 ~~v~L~V~R~   91 (92)
T d2f0aa1          82 GPIVLTVAKL   91 (92)
T ss_dssp             SCEEEEEECC
T ss_pred             CcEEEEEEeC
Confidence            6799998763

>d1q3oa_ b.36.1.1 (A:) Shank1, PDZ domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Shank1, PDZ domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=1.3e-16  Score=120.51  Aligned_cols=82  Identities=28%  Similarity=0.394  Sum_probs=74.0

Q ss_pred             eEEEEEee-CCCCCCeEEeccCC-------------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHH
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEE-------------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVL  200 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~-------------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~  200 (269)
                      -|+|.+.| ++++|||+++++..             ..+++|..|.+||||+++| |++||+|++|||+++.+++|++++
T Consensus         6 ~~tV~l~r~~~~~fGf~l~g~~~~~~~~~~~~~~~~~~~~~I~~v~~g~~A~~aG-L~~GD~Il~INg~~v~~~~h~evv   84 (104)
T d1q3oa_           6 EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVV   84 (104)
T ss_dssp             EEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHH
T ss_pred             eEEEEEEECCCCccCEEEEeecccCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEEcCeEcCCCCHHHHH
Confidence            47789999 77899999998642             2268999999999999999 799999999999999999999999


Q ss_pred             HHHHcCCCeEEEEEEeC
Q psy14174        201 KILQSSEGTITFKLIPA  217 (269)
Q Consensus       201 ~~l~~~~~~v~l~v~p~  217 (269)
                      ++|++++..++|+|.+.
T Consensus        85 ~~ik~~~~~v~L~V~~~  101 (104)
T d1q3oa_          85 NMIRQGGNTLMVKVVMV  101 (104)
T ss_dssp             HHHHHTTTEEEEEEEEE
T ss_pred             HHHHcCCCeEEEEEEec
Confidence            99999999999999874

>d1rgwa_ b.36.1.1 (A:) Zasp (Cypher, Oracle 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Zasp (Cypher, Oracle 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=7.2e-17  Score=117.71  Aligned_cols=80  Identities=20%  Similarity=0.345  Sum_probs=71.7

Q ss_pred             EEEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEE
Q psy14174        136 KIVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKL  214 (269)
Q Consensus       136 r~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v  214 (269)
                      ..|.+.+ +.+|||+|.++.+ ..+++|..|.+||||+++| |++||+|++|||+++.+++|++++++|++++..++|+|
T Consensus         3 ~~V~l~~-~~~~Gf~i~gg~~~~~~v~V~~v~~gs~A~~~~-L~~GD~Il~VNg~~v~~~s~~ev~~~i~~~~~~v~L~V   80 (85)
T d1rgwa_           3 YSVTLTG-PGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTL   80 (85)
T ss_dssp             EEEEECC-SSCCCEEECCCGGGTSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEE
T ss_pred             EEEEecC-CCCCCEEEEeecCCCCCEEEEEecCCChHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEE
Confidence            4577765 6799999998854 3479999999999999988 69999999999999999999999999999999999999


Q ss_pred             EeC
Q psy14174        215 IPA  217 (269)
Q Consensus       215 ~p~  217 (269)
                      .+.
T Consensus        81 ~R~   83 (85)
T d1rgwa_          81 QKS   83 (85)
T ss_dssp             ESC
T ss_pred             EEC
Confidence            875

>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3, RGS3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Regulator of G-protein signaling 3, RGS3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.1e-16  Score=114.59  Aligned_cols=75  Identities=24%  Similarity=0.320  Sum_probs=70.1

Q ss_pred             EEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEe
Q psy14174        138 VQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIP  216 (269)
Q Consensus       138 V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p  216 (269)
                      |.|.|+..+|||+++++   .++||.+|.+||||+++| |++||+|++|||+++.+++|.++..+++++++.++|.|.+
T Consensus         1 v~l~r~~~g~Gf~l~~~---~~~~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~v~~~i~~~~~~v~L~v~R   75 (77)
T d2f5ya1           1 ITIPRGKDGFGFTICCD---SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWR   75 (77)
T ss_dssp             EEEECBTTBTSEEEECS---SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEE
T ss_pred             CEEecCCCcccEEEECC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHCCCCEEEEEEEE
Confidence            57889778899999975   479999999999999999 7999999999999999999999999999999999999976

>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: PDZ domain containing protein 11, Pdzk11
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.68  E-value=9.3e-17  Score=121.44  Aligned_cols=83  Identities=24%  Similarity=0.397  Sum_probs=73.7

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ..+|+|.|.| .+.+|||+|+++.+ ..++||..|.++|+|+++| |++||+|++|||+++.+++|++++.+|+.+. .+
T Consensus        14 ~~pr~V~l~r~~~~~lGf~i~gg~~~~~gi~V~~V~~~s~A~~~G-L~~GD~Il~VNg~~v~~~~~~ev~~llk~~~-~v   91 (104)
T d1wi2a_          14 FLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKTAR-EI   91 (104)
T ss_dssp             SCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHHSS-SE
T ss_pred             CcCEEEEEEeCCCCCcceEEEccccCCCCEEEEEECCCChhHhcc-cccCCEEEEECCEECCCCCHHHHHHHHhcCC-eE
Confidence            3468999999 57899999998754 3489999999999999999 7999999999999999999999999998875 68


Q ss_pred             EEEEEeC
Q psy14174        211 TFKLIPA  217 (269)
Q Consensus       211 ~l~v~p~  217 (269)
                      +|+|.+.
T Consensus        92 ~l~V~~~   98 (104)
T d1wi2a_          92 SMRVRFF   98 (104)
T ss_dssp             EEEEECC
T ss_pred             EEEEEEC
Confidence            8988764

>d1v62a_ b.36.1.1 (A:) Glutamate receptor interacting protein 2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor interacting protein 2, GRIP2 (KIAA1719)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.4e-16  Score=122.86  Aligned_cols=86  Identities=24%  Similarity=0.447  Sum_probs=77.3

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCC--CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCe
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEE--SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGT  209 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~--~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~  209 (269)
                      ..++.|+|.| .+++|||+|+++..  ..++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++.+|++++..
T Consensus        14 ~~p~~V~l~k~~~~~lGi~i~~~~~~~~~gi~V~~I~~gg~A~~~G~L~~GD~Il~VNg~~v~~~~~~~v~~~l~~~~~~   93 (117)
T d1v62a_          14 SGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEK   93 (117)
T ss_dssp             SSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSE
T ss_pred             CCCEEEEEEcCCCCCcCEEEEeeccCCCCCEEEEEECCCCHHHHcCCCChhheeeeECCEecCCCCHHHHHHHHHcCCCc
Confidence            3457899999 67799999998642  35899999999999999998999999999999999999999999999999999


Q ss_pred             EEEEEEeCC
Q psy14174        210 ITFKLIPAD  218 (269)
Q Consensus       210 v~l~v~p~~  218 (269)
                      ++|+|.+..
T Consensus        94 v~l~v~~~~  102 (117)
T d1v62a_          94 VRLEILPVP  102 (117)
T ss_dssp             EEEEECCBT
T ss_pred             EEEEEEECC
Confidence            999998753

>d1x5qa1 b.36.1.1 (A:8-104) Scribble (KIAA0147) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Scribble (KIAA0147)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.1e-16  Score=117.01  Aligned_cols=83  Identities=24%  Similarity=0.481  Sum_probs=74.6

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCC-------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEE-------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS  205 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~-------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~  205 (269)
                      .....+.+.|...+|||+|.++..       ..++||+.|.+||||+++| |++||+|++|||.++.+++|.+++.+|++
T Consensus         7 ~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~~~i~V~~V~~gg~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~   85 (97)
T d1x5qa1           7 EEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRG   85 (97)
T ss_dssp             CEEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHS
T ss_pred             CeEEEEEEEeCCCeeCEEEEeccCCCCccCCCCCEEEEEECCCChhHhhc-ccCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence            345678899988899999987742       2379999999999999999 79999999999999999999999999999


Q ss_pred             CCCeEEEEEEe
Q psy14174        206 SEGTITFKLIP  216 (269)
Q Consensus       206 ~~~~v~l~v~p  216 (269)
                      ++..++|+|.+
T Consensus        86 ~~~~v~l~v~R   96 (97)
T d1x5qa1          86 AGTAVQMRVWR   96 (97)
T ss_dssp             CCSEEEEEEEE
T ss_pred             CCCEEEEEEEE
Confidence            99999999987

>d1x45a1 b.36.1.1 (A:8-92) Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.1e-16  Score=115.23  Aligned_cols=77  Identities=26%  Similarity=0.515  Sum_probs=66.9

Q ss_pred             EEEee-CCCCCCeEEeccC---CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC--eEE
Q psy14174        138 VQLVK-SNEPLGATIKTDE---ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG--TIT  211 (269)
Q Consensus       138 V~l~k-~~~~lG~ti~~~~---~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~--~v~  211 (269)
                      |.|.| .+++|||+|..+.   ...++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++++|++++.  .++
T Consensus         2 V~l~k~~g~~LGi~i~~~~~~~~~~~i~I~~v~~gg~A~~~G~l~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~~~v~   81 (85)
T d1x45a1           2 VFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRVK   81 (85)
T ss_dssp             EEEECCTTSCCCEEEECCTTTSSSCCCEEEEECTTCHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTCSEEE
T ss_pred             eEEEeCCCCccCEEEEeCCCCCCCCCEEEEEeCCCCHHHHcCCCCcCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEE
Confidence            67888 7889999997542   22489999999999999999999999999999999999999999999998754  456


Q ss_pred             EEE
Q psy14174        212 FKL  214 (269)
Q Consensus       212 l~v  214 (269)
                      |+|
T Consensus        82 L~V   84 (85)
T d1x45a1          82 LNI   84 (85)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            655

>d1uita_ b.36.1.1 (A:) Discs large 5 protein KIAA0583 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Discs large 5 protein KIAA0583
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.9e-16  Score=121.14  Aligned_cols=84  Identities=33%  Similarity=0.468  Sum_probs=76.9

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ...+|.|.|.|...+|||+|.++.+ .++||.+|.+||+|+++| |++||+|++|||+++.+++|++++.+|+.++..|+
T Consensus        17 ~~~~r~v~l~k~~~glG~~i~gg~~-~gi~V~~V~~gs~A~~~g-L~~GD~Il~INg~~v~~~~~~~~~~~l~~~~~~v~   94 (117)
T d1uita_          17 VEEPRHVKVQKGSEPLGISIVSGEK-GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDTIT   94 (117)
T ss_dssp             SCCCEEEEEECSSCCCCEEEEECTT-SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEE
T ss_pred             CCCCEEEEEEeCCCccCEEEEccCC-CCEEEEEEecCChHHhCC-CCCCCEeeeECCcccCCCCHHHHHHHHHCCCCeEE
Confidence            3567999999988899999998764 589999999999999998 79999999999999999999999999999999999


Q ss_pred             EEEEeC
Q psy14174        212 FKLIPA  217 (269)
Q Consensus       212 l~v~p~  217 (269)
                      |++.+.
T Consensus        95 l~v~~~  100 (117)
T d1uita_          95 ILAQYN  100 (117)
T ss_dssp             EEECCC
T ss_pred             EEEEEC
Confidence            998764

>d1wfva_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=8.4e-17  Score=121.52  Aligned_cols=86  Identities=23%  Similarity=0.354  Sum_probs=77.5

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      .....|.|.|+..+|||+|.++.+. .+++|.+|.+||+|+++|.|++||+|++|||+++.+++|.+++++|++++..++
T Consensus        10 ~e~~~v~l~k~~~glG~~i~gg~~~~~~i~I~~v~~gg~A~~~g~L~~GD~Il~INg~~v~~~s~~ev~~~l~~~~~~v~   89 (103)
T d1wfva_          10 FDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVR   89 (103)
T ss_dssp             SCCEECCEECCTTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEEC
T ss_pred             ceEEEEEEEeCCCccCEEEEeeccCCCCEEEEEEcCCChHHhcCCCCCCCEEEEECCEECCCCcHHHHHHHHHcCCCEEE
Confidence            4456688999878999999987543 489999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCC
Q psy14174        212 FKLIPAD  218 (269)
Q Consensus       212 l~v~p~~  218 (269)
                      |+|.+..
T Consensus        90 l~v~R~~   96 (103)
T d1wfva_          90 LLLKRGT   96 (103)
T ss_dssp             EEEECTT
T ss_pred             EEEEECC
Confidence            9998853

>d1uepa_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.7e-16  Score=119.71  Aligned_cols=82  Identities=30%  Similarity=0.494  Sum_probs=72.5

Q ss_pred             EEEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCeEEE
Q psy14174        136 KIVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGTITF  212 (269)
Q Consensus       136 r~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~v~l  212 (269)
                      ..|.|.|...+|||+|.++.+ ..++||..|.+||+|+++|.|++||+|++|||+++.+++|++++++|+++  ...|+|
T Consensus        11 ~~V~l~k~~~glG~~i~gg~~~~~~i~V~~v~~g~~A~~~G~L~~GD~Il~VNg~~v~~~t~~e~~~~l~~~~~~~~v~l   90 (103)
T d1uepa_          11 LDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNL   90 (103)
T ss_dssp             ECCEEESSSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEE
T ss_pred             EEEEEEeCCceEeEEEEecccCCCcEEEEEECCCChHHHcCCCCcCCEEEEECCEECCCCCHHHHHHHHHhCCCCCEEEE
Confidence            457888888899999998753 34799999999999999998999999999999999999999999999976  467899


Q ss_pred             EEEeC
Q psy14174        213 KLIPA  217 (269)
Q Consensus       213 ~v~p~  217 (269)
                      +|.+.
T Consensus        91 ~v~r~   95 (103)
T d1uepa_          91 TVRRK   95 (103)
T ss_dssp             EEEEE
T ss_pred             EEEeC
Confidence            88763

>d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Syntaxin binding protein 4
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.65  E-value=4.9e-16  Score=115.75  Aligned_cols=83  Identities=18%  Similarity=0.350  Sum_probs=70.7

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--  206 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--  206 (269)
                      +..++++.+.|. .+|||+|.++.+   ..++||+.|.+||+|+++|.|++||+|++|||+++.+++|++++++|+++  
T Consensus         6 ~~~~~~v~~~~~-~glG~~i~gg~~~~~~~~i~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~v~~~~~~ea~~~l~~~~~   84 (96)
T d1wi4a1           6 DPAFRVITVTKE-TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKL   84 (96)
T ss_dssp             CTTEEEEEECCS-SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCC
T ss_pred             CCcEEEEEecCC-CccCEEEEeccCCCCCCCEEEEEEeCCCccccCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccC
Confidence            456788888774 479999998743   34799999999999999998999999999999999999999999999976  


Q ss_pred             --CCeEEEEEE
Q psy14174        207 --EGTITFKLI  215 (269)
Q Consensus       207 --~~~v~l~v~  215 (269)
                        ...+.+.+.
T Consensus        85 ~~~~~vel~~~   95 (96)
T d1wi4a1          85 RSESPWEIAFI   95 (96)
T ss_dssp             SSSSCEEEEEE
T ss_pred             CCCCeEEEEEE
Confidence              355666664

>d1uf1a_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: KIAA1526 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=5.8e-16  Score=121.28  Aligned_cols=84  Identities=30%  Similarity=0.402  Sum_probs=74.1

Q ss_pred             CceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeE
Q psy14174        133 ETVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v  210 (269)
                      ...+.|.|.| .+++|||+|.++.+. .++||.+|.+||+|+++| |++||+|++|||+++.+++|++++++|+++ ..+
T Consensus        19 ~~~~~v~l~~~~~~~lGf~i~gg~~~~~gv~V~~V~~g~~A~~~g-L~~GD~Il~INg~~v~~~s~~evv~~lr~~-~~v   96 (128)
T d1uf1a_          19 GDEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS-RHL   96 (128)
T ss_dssp             SSEEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC-SEE
T ss_pred             CCeEEEEEEECCCCccCEEEEeeccCCCCEEEEEECCCChHHhcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-CcE
Confidence            4458899999 678999999987543 489999999999999999 799999999999999999999999999876 578


Q ss_pred             EEEEEeCC
Q psy14174        211 TFKLIPAD  218 (269)
Q Consensus       211 ~l~v~p~~  218 (269)
                      .++|.+..
T Consensus        97 ~l~v~~~~  104 (128)
T d1uf1a_          97 ILTVKDVG  104 (128)
T ss_dssp             EEEEECCS
T ss_pred             EEEEEECC
Confidence            89998753

>d1ueqa_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.3e-15  Score=118.39  Aligned_cols=85  Identities=31%  Similarity=0.395  Sum_probs=76.0

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCe
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGT  209 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~  209 (269)
                      ..+..|.|.|...+|||+|.++.+ ..++||.+|.+||+|+++|.|++||+|++|||+++.+++|.+++++|+++  +..
T Consensus        18 ~~~~~v~l~k~~~glG~~i~gg~~~~~~i~I~~v~~gg~A~~~g~L~~GD~Il~INg~~v~~~t~~eav~~l~~~~~g~~   97 (123)
T d1ueqa_          18 GTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQS   97 (123)
T ss_dssp             SEEEEEEEECCTTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCE
T ss_pred             CeEEEEEEEECCCeeCEEEEeecCCCCCEEEEEECCCCHHHHcCCCeeCCEEEEECCEECCCCCHHHHHHHHHcCCCCCE
Confidence            456678888888899999998754 35899999999999999999999999999999999999999999999986  577


Q ss_pred             EEEEEEeC
Q psy14174        210 ITFKLIPA  217 (269)
Q Consensus       210 v~l~v~p~  217 (269)
                      +.|+|.+.
T Consensus        98 v~L~v~R~  105 (123)
T d1ueqa_          98 VNLVLCRG  105 (123)
T ss_dssp             EEEEEEES
T ss_pred             EEEEEEcC
Confidence            99999874

>d1vb7a_ b.36.1.1 (A:) PDZ-LIM protein mystique {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: PDZ-LIM protein mystique
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.64  E-value=2.4e-16  Score=117.06  Aligned_cols=75  Identities=20%  Similarity=0.357  Sum_probs=68.8

Q ss_pred             CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        143 SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       143 ~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      ++.+|||+|.++.+. .+++|..|.+||||+++| |++||+|++|||+++.+++|.+++.+|+++++.++|+|.+..
T Consensus        14 g~~~~Gf~i~gg~d~~~~i~V~~v~~gs~A~~~g-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~R~~   89 (94)
T d1vb7a_          14 GPAPWGFRISGGRDFHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSS   89 (94)
T ss_dssp             SSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCC
T ss_pred             CCCcCCEEEEeeccCCCCEEEEeccCCChhhhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence            667999999988643 489999999999999988 799999999999999999999999999999999999998853

>d1w9ea1 b.36.1.1 (A:110-194) Syntenin 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Syntenin 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=9.1e-16  Score=111.70  Aligned_cols=79  Identities=27%  Similarity=0.387  Sum_probs=70.8

Q ss_pred             eEEEEEee-CCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC-CCeEEE
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS-EGTITF  212 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~-~~~v~l  212 (269)
                      +|.|.+.| ...+|||++...  .++++|.+|.+||||+++| |++||+|++|||+++.+++++++..+|+++ +..++|
T Consensus         3 pr~v~l~k~~~~~lG~~l~~~--~~g~~V~~v~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~v~~~lk~~~~~~v~l   79 (85)
T d1w9ea1           3 PREVILCKDQDGKIGLRLKSI--DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITM   79 (85)
T ss_dssp             CEEEEEECCTTSCCSEEEEEE--TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEE
T ss_pred             CEEEEEEeCCCCCEeEEEEeC--CCCEEEEEECCCCHHHHcC-CCCccEEEEECCEEeCCCCHHHHHHHHhcCCCCEEEE
Confidence            47889999 777899999987  4689999999999999999 699999999999999999999999999876 467888


Q ss_pred             EEEe
Q psy14174        213 KLIP  216 (269)
Q Consensus       213 ~v~p  216 (269)
                      +|.+
T Consensus        80 ~v~~   83 (85)
T d1w9ea1          80 TIRD   83 (85)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            8864

>d2h3la1 b.36.1.1 (A:1310-1412) Erbin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Erbin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.3e-15  Score=114.89  Aligned_cols=81  Identities=20%  Similarity=0.360  Sum_probs=69.5

Q ss_pred             eEEEEEee-CCCCCCeEEeccCC---------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHH
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEE---------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQ  204 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~---------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~  204 (269)
                      .+.|.+.+ .+.+|||+|.++.+         ..+|||++|.+||||+++  |++||+|++|||+++.+++|.+++++|+
T Consensus        10 ~~~v~v~~~~~~~lGf~I~Gg~~~~~~~~~~~~~gI~I~~V~~gs~A~~~--L~~GD~Il~VNg~~v~~~t~~eav~~l~   87 (103)
T d2h3la1          10 KQEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKL--LQPGDKIIQANGYSFINIEHGQAVSLLK   87 (103)
T ss_dssp             EEEEEEEEECSSSCSEEEEETTTTCCCSSSTTCCSEEEEEECTTSTTTTT--CCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred             cEEEEEEEccCCCCCEEEeeecCCCCCccccCCCCEEEEEeCCCChHHhc--cCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence            34455555 56689999998742         247999999999999864  7999999999999999999999999999


Q ss_pred             cCCCeEEEEEEeC
Q psy14174        205 SSEGTITFKLIPA  217 (269)
Q Consensus       205 ~~~~~v~l~v~p~  217 (269)
                      ++++.++|+|.+.
T Consensus        88 ~~~~~v~L~V~R~  100 (103)
T d2h3la1          88 TFQNTVELIIVRE  100 (103)
T ss_dssp             HCCSEEEEEEEEE
T ss_pred             hCCCeEEEEEEEE
Confidence            9999999999873

>d2cs5a1 b.36.1.1 (A:8-113) Tyrosine-protein phosphatase non-receptor type 4, PTPN4 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Tyrosine-protein phosphatase non-receptor type 4, PTPN4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=8.4e-16  Score=116.47  Aligned_cols=87  Identities=22%  Similarity=0.412  Sum_probs=74.4

Q ss_pred             CCceEEEEEee-CCCCCCeEEeccCC-CCcEEEEEecCCChhhhc-CCCCCCCeEEEECCEecCCCChHHHHHHHHcC--
Q psy14174        132 EETVKIVQLVK-SNEPLGATIKTDEE-SGKIVVARVMHGGAADRS-GLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--  206 (269)
Q Consensus       132 ~~~~r~V~l~k-~~~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~-GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--  206 (269)
                      .+.+++|.+.| ...+|||+|+++.+ ..++||.+|.+||+|+++ |.|++||+|++|||+++.+++|++++++|+++  
T Consensus         6 ~~~~~~v~l~~~~~g~lG~~l~gg~d~~~~i~V~~v~~g~~A~~~~g~L~~GD~Il~VNg~~v~~~~~~e~~~ll~~~~~   85 (106)
T d2cs5a1           6 HDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCE   85 (106)
T ss_dssp             SSCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHH
T ss_pred             CCcEEEEEEEeCCCCCccEEEEeeecCCCCEEEEEEcCCCcchhccCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence            45678899999 66789999998754 348999999999999995 66899999999999999999999999999864  


Q ss_pred             --CCeEEEEEEeCC
Q psy14174        207 --EGTITFKLIPAD  218 (269)
Q Consensus       207 --~~~v~l~v~p~~  218 (269)
                        ...+.|++.|..
T Consensus        86 ~~~~~v~L~vrp~~   99 (106)
T d2cs5a1          86 RHSGELMLLVRPNA   99 (106)
T ss_dssp             CCSSCEEEEEECCC
T ss_pred             CCCcEEEEEECCCC
Confidence              356888888753

>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Harmonin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.63  E-value=1.2e-15  Score=117.75  Aligned_cols=85  Identities=29%  Similarity=0.447  Sum_probs=72.3

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCC--CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC----
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEES--GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS----  206 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~--~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~----  206 (269)
                      ..++++.+ |...+|||+|.++.+.  +++||.+|.+||+|+++|.|++||+|++|||+++.+++|.+++.+|+++    
T Consensus        17 ~~v~~~~~-~~~~~lG~~i~gg~d~~~~~v~I~~v~~gg~A~~~G~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~~~~~~   95 (118)
T d1v6ba_          17 KDVRLLRI-KKEGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQG   95 (118)
T ss_dssp             CCEEEEEE-ESCSCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHT
T ss_pred             ceEEEEEe-cCCCCCCEEEEeeecCCCCCEEEEEECCCChHHhcCCCCCCCEEeeECCEECCCCcHHHHHHHHHhcccCC
Confidence            34665544 4456899999998543  4899999999999999999999999999999999999999999999864    


Q ss_pred             CCeEEEEEEeCC
Q psy14174        207 EGTITFKLIPAD  218 (269)
Q Consensus       207 ~~~v~l~v~p~~  218 (269)
                      +..|+|+|.+..
T Consensus        96 ~~~V~L~v~r~p  107 (118)
T d1v6ba_          96 GDWIDLVVAVCP  107 (118)
T ss_dssp             CSEEEEEEECCC
T ss_pred             CCEEEEEEEeCC
Confidence            677999998854

>d1x5na1 b.36.1.1 (A:8-108) Harmonin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Harmonin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.2e-15  Score=114.62  Aligned_cols=82  Identities=24%  Similarity=0.455  Sum_probs=71.9

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEE
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTIT  211 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~  211 (269)
                      ..|.|.+.+ ++.+|||+|.++.+. .++||..|.+||||+++| |++||+|++|||+++.+++|.+++++|++++ .++
T Consensus         8 ~~~~v~i~~~~~~glG~~i~~g~~~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~~~~~v~~~lk~~~-~~~   85 (101)
T d1x5na1           8 KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSSR-SLT   85 (101)
T ss_dssp             SSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHCS-SEE
T ss_pred             ccEEEEEEeeCCCcccEEEeccCCCCCCEEEEEECCCChHHhCC-CCcccEEEEECCEECCCCCHHHHHHHHhCCC-CEE
Confidence            347788888 888999999987543 489999999999999999 7999999999999999999999999999876 477


Q ss_pred             EEEEeC
Q psy14174        212 FKLIPA  217 (269)
Q Consensus       212 l~v~p~  217 (269)
                      ++|.+.
T Consensus        86 l~v~~~   91 (101)
T d1x5na1          86 ISIVAA   91 (101)
T ss_dssp             EEECSS
T ss_pred             EEEEEC
Confidence            777664

>d1vaea_ b.36.1.1 (A:) Rhophilin-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Rhophilin-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=1.4e-16  Score=121.89  Aligned_cols=79  Identities=19%  Similarity=0.314  Sum_probs=70.8

Q ss_pred             ceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC-CeEEE
Q psy14174        134 TVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE-GTITF  212 (269)
Q Consensus       134 ~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~-~~v~l  212 (269)
                      .+|.|.|.|...+|||+|+++   .+++|.+|.+||||+++| |++||+|++|||+++.+++|++++++|++++ ..++|
T Consensus        15 ~pr~v~l~k~~~g~Gf~i~g~---~~v~V~~V~~~spA~~~G-L~~GD~Il~INg~~v~~~~~~ev~~llk~~~~~~v~l   90 (111)
T d1vaea_          15 PPRGIHFTVEEGDLGFTLRGN---TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEM   90 (111)
T ss_dssp             CCCCCCEECCSSCCSCCEESS---SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECE
T ss_pred             CCEEEEEEECCCccCEEEECC---ccEEEEEEcCCChHHhcc-cCcccEEEEECCEEcCCCCHHHHHHHHHcCCCCeEEE
Confidence            356789999777999999976   479999999999999999 7999999999999999999999999999875 57888


Q ss_pred             EEEe
Q psy14174        213 KLIP  216 (269)
Q Consensus       213 ~v~p  216 (269)
                      +|.+
T Consensus        91 ~v~~   94 (111)
T d1vaea_          91 KVVS   94 (111)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            8764

>d1ueza_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: KIAA1526 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.6e-16  Score=116.09  Aligned_cols=84  Identities=29%  Similarity=0.459  Sum_probs=72.5

Q ss_pred             CCceEEEEEee--CCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        132 EETVKIVQLVK--SNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       132 ~~~~r~V~l~k--~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      ...++.|.|+|  ..++|||+|.++.+. .++||..|.+||+|+++| |++||+|++|||+++.++++.+++++|++.+ 
T Consensus         6 ~~~~~~v~l~r~~~~~glG~~i~gg~~~~~~i~V~~v~~gg~A~~~g-L~~GD~Il~ING~~v~~~~~~~v~~ll~~~~-   83 (101)
T d1ueza_           6 SGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGSK-   83 (101)
T ss_dssp             SCCCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSSS-
T ss_pred             CCCEEEEEEEECCCCCeeCEEEEecccCCCCEEEEEECCCChHHhcC-CCCCcEEEEECCEECCCCCHHHHHHHHhcCC-
Confidence            34689999988  357899999987543 489999999999999999 7999999999999999999999999998875 


Q ss_pred             eEEEEEEeC
Q psy14174        209 TITFKLIPA  217 (269)
Q Consensus       209 ~v~l~v~p~  217 (269)
                      .+.++|.+.
T Consensus        84 ~~~l~V~~~   92 (101)
T d1ueza_          84 KLVLSVYSA   92 (101)
T ss_dssp             SCCEEECCC
T ss_pred             CEEEEEEEC
Confidence            466777654

>d1ujda_ b.36.1.1 (A:) Hypothetical protein KIAA0559 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Hypothetical protein KIAA0559
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=3.2e-15  Score=115.19  Aligned_cols=83  Identities=25%  Similarity=0.369  Sum_probs=71.7

Q ss_pred             EEEEEee-------CCCCCCeEEeccCC------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHH
Q psy14174        136 KIVQLVK-------SNEPLGATIKTDEE------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKI  202 (269)
Q Consensus       136 r~V~l~k-------~~~~lG~ti~~~~~------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~  202 (269)
                      +.+.+.|       .+.+|||+|.++.+      ..++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++.+
T Consensus        14 ~~v~l~r~~~~~~~~g~glG~~i~gg~~~~~~~~~~gi~I~~V~~gs~A~~~G~L~~GD~Il~INg~~v~~~s~~e~~~~   93 (117)
T d1ujda_          14 ARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSI   93 (117)
T ss_dssp             EEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred             eeEEEEecccccccCCcccCEEEeccccCCCCCCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCcHHHHHHH
Confidence            4455655       25689999987632      2279999999999999999899999999999999999999999999


Q ss_pred             HHcCCCeEEEEEEeCC
Q psy14174        203 LQSSEGTITFKLIPAD  218 (269)
Q Consensus       203 l~~~~~~v~l~v~p~~  218 (269)
                      |+++++.++|+|.+..
T Consensus        94 i~~~~~~v~l~v~r~~  109 (117)
T d1ujda_          94 ISQQSGEAEICVRLDL  109 (117)
T ss_dssp             HSCCSSCEEEEEESSC
T ss_pred             HHcCCCeEEEEEEECC
Confidence            9999999999998753

>d1ufxa_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: KIAA1526 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.3e-15  Score=114.83  Aligned_cols=82  Identities=26%  Similarity=0.435  Sum_probs=70.9

Q ss_pred             eEEEEEeeCCCCCCeEEeccCCC--CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC-----
Q psy14174        135 VKIVQLVKSNEPLGATIKTDEES--GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE-----  207 (269)
Q Consensus       135 ~r~V~l~k~~~~lG~ti~~~~~~--~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~-----  207 (269)
                      -..|.+.|.+.+|||+|.++.+.  .+++|.+|.+||+|+++|.|++||+|++|||+++.+++|++++.+|++++     
T Consensus         7 ~~vv~~~k~~~~lG~~i~gg~~~~~~~~~I~~i~~gg~A~~~G~L~~GD~Il~VNg~~v~~~s~~e~~~~l~~a~~~~~~   86 (103)
T d1ufxa_           7 GTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDR   86 (103)
T ss_dssp             SEEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSC
T ss_pred             CEEEEEEeCCCccCEEEeeecCCCCCCEEEEEEcCCcchhhcCCCCCCCEEEEECCEECCCCcHHHHHHHHHHccCCCcc
Confidence            36688888889999999987543  35899999999999999999999999999999999999999999999753     


Q ss_pred             CeEEEEEEe
Q psy14174        208 GTITFKLIP  216 (269)
Q Consensus       208 ~~v~l~v~p  216 (269)
                      ..+.|.+..
T Consensus        87 ~~~~l~v~~   95 (103)
T d1ufxa_          87 DYIDFLVTE   95 (103)
T ss_dssp             SEEEEEECC
T ss_pred             ceEEEEEeC
Confidence            556666654

>d1v5qa_ b.36.1.1 (A:) Glutamate receptor interacting protein {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor interacting protein
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=9.6e-16  Score=119.04  Aligned_cols=82  Identities=23%  Similarity=0.318  Sum_probs=70.9

Q ss_pred             ceEEEEEee-CCCCCCeEEeccCC-----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCC
Q psy14174        134 TVKIVQLVK-SNEPLGATIKTDEE-----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSE  207 (269)
Q Consensus       134 ~~r~V~l~k-~~~~lG~ti~~~~~-----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~  207 (269)
                      ..+.|.|.| .+.+|||+|.++..     ..++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++++|++++
T Consensus        15 ~~~ev~l~k~~~~glGf~i~gg~~~~~~~~~~i~V~~I~~gg~A~~~G~L~~GD~Il~INg~~v~~~~~~e~~~~lk~~~   94 (122)
T d1v5qa_          15 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS   94 (122)
T ss_dssp             EEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHT
T ss_pred             eeEEEEEecCCCCccCEEEecccCCCccCCCCeEEEEECCCCHHHHhCCCCcCCEEEEECCCcCCCCCHHHHHHHHHcCC
Confidence            456788888 67789999998742     247999999999999999999999999999999999999999999999887


Q ss_pred             CeEEEEEE
Q psy14174        208 GTITFKLI  215 (269)
Q Consensus       208 ~~v~l~v~  215 (269)
                      ..+.|++.
T Consensus        95 ~~~~l~l~  102 (122)
T d1v5qa_          95 ITSKVTLE  102 (122)
T ss_dssp             TTTCEEEE
T ss_pred             CceEEEEE
Confidence            66555544

>d1x5ra1 b.36.1.1 (A:8-106) Glutamate receptor interacting protein 2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Glutamate receptor interacting protein 2, GRIP2 (KIAA1719)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5.3e-16  Score=116.20  Aligned_cols=80  Identities=24%  Similarity=0.345  Sum_probs=68.2

Q ss_pred             eEEEEEee-CCCCCCeEEeccC-----CCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCC
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDE-----ESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEG  208 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~-----~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~  208 (269)
                      .+.|.+.| ++++|||+|+++.     ...++||++|.+||||+++|+|++||+|++|||+++.+++|++++++|++++.
T Consensus         9 ~~~V~l~~~~~~~lG~~i~gg~~~~~~~~~~~~V~~i~~~s~A~~~G~l~~GD~Il~INg~~v~~~t~~e~~~~lr~~~~   88 (99)
T d1x5ra1           9 TTEVVLCGDPLSGFGLQLQGGIFATETLSSPPLVCFIEPDSPAERCGLLQVGDRVLSINGIATEDGTMEEANQLLRDAAL   88 (99)
T ss_dssp             EEEEEECCCTTTCCCEEEECCSCSSSBCSSCCEEEEECTTSHHHHTSSCCTTCBCSEETTEESTTSBHHHHHHHHHHHHT
T ss_pred             eEEEEEEcCCCCCcCEEEEEeccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence            35577888 7789999999863     23489999999999999999999999999999999999999999999997654


Q ss_pred             e--EEEEE
Q psy14174        209 T--ITFKL  214 (269)
Q Consensus       209 ~--v~l~v  214 (269)
                      .  ++|.+
T Consensus        89 ~~~l~l~v   96 (99)
T d1x5ra1          89 AHKVVLEV   96 (99)
T ss_dssp             TTCEEEEE
T ss_pred             CCEEEEEE
Confidence            4  55544

>d1wg6a_ b.36.1.1 (A:) Partitioning-defective 3-like protein, PAR3-L (RIKEN cDNA 2810455b10) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Partitioning-defective 3-like protein, PAR3-L (RIKEN cDNA 2810455b10)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=1.7e-15  Score=118.38  Aligned_cols=83  Identities=25%  Similarity=0.468  Sum_probs=71.6

Q ss_pred             EEEEEee-CCCCCCeEEeccCC-----CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC---
Q psy14174        136 KIVQLVK-SNEPLGATIKTDEE-----SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS---  206 (269)
Q Consensus       136 r~V~l~k-~~~~lG~ti~~~~~-----~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~---  206 (269)
                      ..|.+.| ++.+|||+|.++.+     ..++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++++||++   
T Consensus        27 ~~v~l~~~~~~glG~~i~gg~~~~~~~~~~i~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~v~~~~~~e~~~~lr~a~~~  106 (127)
T d1wg6a_          27 LEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSM  106 (127)
T ss_dssp             EEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHH
T ss_pred             EEEEEccCCCCcEeEEEEeecCCCCCCcCCEEEEEECCCCchhccCCCCCCCEEEeECCEECCCCCHHHHHHHHHhcccc
Confidence            3455656 67789999997642     13899999999999999999999999999999999999999999999975   


Q ss_pred             ----CCeEEEEEEeCC
Q psy14174        207 ----EGTITFKLIPAD  218 (269)
Q Consensus       207 ----~~~v~l~v~p~~  218 (269)
                          .+.|+|+|.+..
T Consensus       107 ~~~~~~~V~L~V~R~~  122 (127)
T d1wg6a_         107 EGNIRGMIQLVILRRS  122 (127)
T ss_dssp             HHHHTCEEEEEEEECS
T ss_pred             cCCCCCEEEEEEeeCC
Confidence                678999998853

>d2cssa1 b.36.1.1 (A:8-115) Regulating synaptic membrane exocytosis protein 1, RIMS1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Regulating synaptic membrane exocytosis protein 1, RIMS1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=6e-16  Score=117.71  Aligned_cols=74  Identities=28%  Similarity=0.374  Sum_probs=65.7

Q ss_pred             CCCCCCeEEeccCCC----CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCeEEEEEEe
Q psy14174        143 SNEPLGATIKTDEES----GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGTITFKLIP  216 (269)
Q Consensus       143 ~~~~lG~ti~~~~~~----~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~v~l~v~p  216 (269)
                      .+.+|||+|.++.+.    .++||.+|.+||+|+++|.|++||+|++|||+++.+++|++++.+|+++  +..++|.|.+
T Consensus        28 ~~~~lG~~i~gg~~~~~~~~gi~V~~v~~gg~A~~~g~L~~GD~Il~VNg~~~~~~t~~ea~~~l~~~~~~~~v~l~v~R  107 (108)
T d2cssa1          28 SGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSR  107 (108)
T ss_dssp             CSSCSSEEEEEEEECTTSSEEEEEEEECTTSHHHHTSCCCTTCEEEEESSCBCTTSCHHHHHHHHHHGGGCSCEEEEEEE
T ss_pred             CCCCcCEEEeccCCCCCCCcCEEEEEECCCCchhhcCCCCcCCEEEEECCEECCCCCHHHHHHHHHhCCCCCEEEEEEeC
Confidence            577899999987432    3899999999999999998999999999999999999999999999875  4678888765

>d2csja1 b.36.1.1 (A:8-111) Tight junction protein ZO-2, Tjp2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Tight junction protein ZO-2, Tjp2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=2.4e-15  Score=113.50  Aligned_cols=81  Identities=25%  Similarity=0.314  Sum_probs=71.9

Q ss_pred             eEEEEEee-CCCCCCeEEeccCC-------CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        135 VKIVQLVK-SNEPLGATIKTDEE-------SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       135 ~r~V~l~k-~~~~lG~ti~~~~~-------~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      .++|.|.| .+++|||+|+++.+       ..++||.+|.+||+|+ ++ |++||+|++|||+++.+++|.+++++|+++
T Consensus         8 ~~tV~l~k~~~~~~G~~i~gg~~~~~~~~~~~~i~V~~v~~gs~A~-~~-L~~GD~Il~INg~~v~~~~~~ev~~ll~~~   85 (104)
T d2csja1           8 QYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLRKS   85 (104)
T ss_dssp             EEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHHHS
T ss_pred             cEEEEEEeCCCCCcCEEEEcccCCCccccCCCCEEEEEECCCChhh-cC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence            46789999 67899999998743       2479999999999997 45 799999999999999999999999999999


Q ss_pred             CCeEEEEEEeC
Q psy14174        207 EGTITFKLIPA  217 (269)
Q Consensus       207 ~~~v~l~v~p~  217 (269)
                      +..++|+|.+.
T Consensus        86 ~~~v~l~V~R~   96 (104)
T d2csja1          86 GKIAAIVVKRP   96 (104)
T ss_dssp             CSEEEEEEEEE
T ss_pred             CCEEEEEEEeC
Confidence            99999999774

>d1v5la_ b.36.1.1 (A:) Alpha-actinin-2 associated LIM protein {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Alpha-actinin-2 associated LIM protein
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=2.4e-15  Score=113.35  Aligned_cols=76  Identities=18%  Similarity=0.336  Sum_probs=69.6

Q ss_pred             eCCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        142 KSNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       142 k~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      +++.+|||+|.++.+. .+++|++|.+|++|++++ |++||+|++|||+++.+++|.+++.+|++++..++|+|.+..
T Consensus        12 ~g~~~~Gf~l~gg~d~~~~i~V~~v~~g~~A~~~~-L~~GD~Il~VNg~~v~~~~~~e~v~ll~~~~~~v~l~V~R~~   88 (103)
T d1v5la_          12 PGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE   88 (103)
T ss_dssp             ESSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCT
T ss_pred             ECCCCCCEEEEeecCCCCCEEEEEccCCChHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence            6788999999998643 489999999999999888 699999999999999999999999999999999999998754

>d1wifa_ b.36.1.1 (A:) hypothetical PDZ domain containing protein Uqcrc2 (4930408O21Rik) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: hypothetical PDZ domain containing protein Uqcrc2 (4930408O21Rik)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=7.6e-15  Score=114.48  Aligned_cols=83  Identities=25%  Similarity=0.356  Sum_probs=75.1

Q ss_pred             CceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCeE
Q psy14174        133 ETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGTI  210 (269)
Q Consensus       133 ~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~v  210 (269)
                      ..+..+.+.|+..+|||++..+  ..+++|.+|.+||+|+++|.|++||+|++|||+++.+++|++++++|+.+  +..|
T Consensus        26 ~~~~~v~l~~g~~GlG~~i~~~--~~~i~V~~v~~gg~A~~~G~l~~GD~Il~Ing~~v~~~~~~e~~~llr~~~~g~~v  103 (126)
T d1wifa_          26 NKVIQTKLTVGNLGLGLVVIQN--GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVL  103 (126)
T ss_dssp             CCEEEEEEECCTTCCCCCEEEE--TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEE
T ss_pred             CcEEEEEEeeCCCcEEEEEEec--CCcEEEEEECCCChHHHcCCCCCCCEEEEECCEEeEeccHHHHHHHHhCCCCCCEE
Confidence            3466788999888999999876  45799999999999999999999999999999999999999999999985  5799


Q ss_pred             EEEEEeC
Q psy14174        211 TFKLIPA  217 (269)
Q Consensus       211 ~l~v~p~  217 (269)
                      +|+|.+.
T Consensus       104 ~L~v~R~  110 (126)
T d1wifa_         104 QIKAYRG  110 (126)
T ss_dssp             EEEEESS
T ss_pred             EEEEEeC
Confidence            9999875

>d1wf7a_ b.36.1.1 (A:) Enigma homolog ENH {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Enigma homolog ENH
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=6e-15  Score=111.13  Aligned_cols=79  Identities=22%  Similarity=0.435  Sum_probs=69.9

Q ss_pred             EEEeeCCCCCCeEEeccCCC-CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEe
Q psy14174        138 VQLVKSNEPLGATIKTDEES-GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIP  216 (269)
Q Consensus       138 V~l~k~~~~lG~ti~~~~~~-~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p  216 (269)
                      |.+ +++.+|||+|.++.+. .++||..|.+|++|++++ |++||+|++|||+++.+++|++++++|++++..+.|+|.+
T Consensus         9 v~~-~g~~g~Gf~i~gg~d~~~~v~V~~v~~g~~a~~~~-L~~GD~Il~INg~~v~~~t~~eav~li~~~~~~v~L~v~R   86 (103)
T d1wf7a_           9 VSL-VGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQR   86 (103)
T ss_dssp             EEE-ESSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEEEECC
T ss_pred             EEE-ECCCCccEEEEcccCCCCCEEEEecCCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence            444 4667999999998653 489999999999999877 7999999999999999999999999999999999999987


Q ss_pred             CC
Q psy14174        217 AD  218 (269)
Q Consensus       217 ~~  218 (269)
                      ..
T Consensus        87 ~~   88 (103)
T d1wf7a_          87 AS   88 (103)
T ss_dssp             CS
T ss_pred             CC
Confidence            53

>d1wh1a_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Hypothetical protein KIAA1095
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=9.6e-14  Score=107.79  Aligned_cols=84  Identities=23%  Similarity=0.388  Sum_probs=69.8

Q ss_pred             CCceEEEEEee--CCCCCCeEEeccCC---CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC
Q psy14174        132 EETVKIVQLVK--SNEPLGATIKTDEE---SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS  206 (269)
Q Consensus       132 ~~~~r~V~l~k--~~~~lG~ti~~~~~---~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~  206 (269)
                      +..++.|.|.|  +.++|||+|.++.+   ..+|||.+|.+||+|+++|.|++||+|++|||+++.  ++.++..+++.+
T Consensus        17 ~~e~~~V~l~k~~~~~~lG~~i~~~~~~~~~~gi~V~~v~~gg~A~~~g~L~~GD~Il~INg~~v~--~~~~~~~~l~~~   94 (124)
T d1wh1a_          17 ELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSE   94 (124)
T ss_dssp             SCEECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCS
T ss_pred             CceeEEEEEEECCCCCcccEEEEecCCCCCCCCEEEEEECCCChhhhhcccCCCCEEEEECCEECC--CHHHHHHHHhhC
Confidence            33567788888  55789999987643   348999999999999999999999999999999996  467888888874


Q ss_pred             -CCeEEEEEEeC
Q psy14174        207 -EGTITFKLIPA  217 (269)
Q Consensus       207 -~~~v~l~v~p~  217 (269)
                       +..|.|.+.+.
T Consensus        95 ~~~~v~l~v~r~  106 (124)
T d1wh1a_          95 ENKNFSLLIARP  106 (124)
T ss_dssp             SCCSCCEEEEEC
T ss_pred             CCCcEEEEEEeC
Confidence             67888888764

>d1ujva_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: PDZ domain
domain: Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.3e-12  Score=96.75  Aligned_cols=82  Identities=18%  Similarity=0.246  Sum_probs=65.4

Q ss_pred             CCceEEEEEeeCCCCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcC--CCe
Q psy14174        132 EETVKIVQLVKSNEPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSS--EGT  209 (269)
Q Consensus       132 ~~~~r~V~l~k~~~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~~~  209 (269)
                      ...+..|+|.|+..+|||+|+++.  .+.++..+   +++++.+.|++||+|++|||+++.+++|++++++||+.  +..
T Consensus         8 ~~e~~~v~l~k~~~glGf~i~g~~--~~~~~~~~---~~~~~~~~L~~GD~Il~VNg~~v~~~t~~evv~~lk~~~~g~~   82 (96)
T d1ujva_           8 QAELMTLTIVKGAQGFGFTIADSP--TGQRVKQI---LDIQGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSE   82 (96)
T ss_dssp             CCCCEEEEEECCSSSSSEEEEEET--TEEEEEEE---SCGGGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSE
T ss_pred             CceEEEEEEEeCCCcccEEEEeeC--CCceEeec---cCcccccCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCE
Confidence            345688999997789999999874  33433333   34555556899999999999999999999999999975  578


Q ss_pred             EEEEEEeCC
Q psy14174        210 ITFKLIPAD  218 (269)
Q Consensus       210 v~l~v~p~~  218 (269)
                      ++|+|.+..
T Consensus        83 v~l~v~R~~   91 (96)
T d1ujva_          83 TSLIIHRGS   91 (96)
T ss_dssp             EEEEEECCS
T ss_pred             EEEEEEECC
Confidence            999998753

>d1fc6a3 b.36.1.3 (A:157-248) Photosystem II D1 C-terminal processing protease {Algae (Scenedesmus obliquus) [TaxId: 3088]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: Tail specific protease PDZ domain
domain: Photosystem II D1 C-terminal processing protease
species: Algae (Scenedesmus obliquus) [TaxId: 3088]

Probab=99.36  E-value=1.8e-12  Score=95.18  Aligned_cols=73  Identities=27%  Similarity=0.446  Sum_probs=64.2

Q ss_pred             CCCCeEEeccCC-CCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc-CCCeEEEEEEeCC
Q psy14174        145 EPLGATIKTDEE-SGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS-SEGTITFKLIPAD  218 (269)
Q Consensus       145 ~~lG~ti~~~~~-~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~l~v~p~~  218 (269)
                      .++|+++..... ..+++|..|.+||||+++| |++||+|++|||.++.++++++++.+|+. .+..|+|++.+..
T Consensus         5 ~GiGi~i~~~~~~~~~v~V~~v~~gsPA~~AG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~g~~g~~v~l~i~R~g   79 (92)
T d1fc6a3           5 TGVGLEITYDGGSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPG   79 (92)
T ss_dssp             BBCSEEEEECTTCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETT
T ss_pred             EEEEEEEEEcCCCCceEEEEEecCCCChhHHh-hHcCCcceecCceEcCCCCHHHHHHHhhCCCCCEEEEEEEECC
Confidence            478999876532 3489999999999999999 79999999999999999999999999985 5678999999864

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.33  E-value=2.1e-13  Score=107.32  Aligned_cols=46  Identities=24%  Similarity=0.491  Sum_probs=43.6

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ++-.++|||+|||+|..|..+||++.||+|++||||||++++|.+|
T Consensus        20 kp~~~~vra~~~Y~~~~d~~~P~~~~~LsF~~gdil~v~~~~d~~W   65 (136)
T d1vyua1          20 KPVAFAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDW   65 (136)
T ss_dssp             SCCCEEEEESSCEEGGGCTTCSSTTCBCEECTTCEEEEEEECSSSE
T ss_pred             CCceEEEEEeeccCCCCCCCCcccCcccCCCCCCEEEEEeccCCCc
Confidence            4457899999999999999999999999999999999999999999

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.33  E-value=3.4e-13  Score=99.60  Aligned_cols=46  Identities=26%  Similarity=0.518  Sum_probs=43.4

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+..++|||+|||+|..|..+||++.||+|++||||+|++++|++|
T Consensus        18 ~p~~~~vrAlydY~~~~dd~~P~~~~~LsF~~GDii~v~~~~d~~W   63 (96)
T d1t0ha_          18 KPVAFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDW   63 (96)
T ss_dssp             SCCCEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSE
T ss_pred             CCccEEEEEeeccCCCCCCCCccccccccCCCCCEEEEeeeeCCCc
Confidence            4456899999999999999999999999999999999999999999

>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: L27 domain
superfamily: L27 domain
family: L27 domain
domain: Peripheral plasma membrane protein cask
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=2.5e-13  Score=86.93  Aligned_cols=49  Identities=39%  Similarity=0.513  Sum_probs=45.6

Q ss_pred             hHHhHHHHHHHHhhccCCChhHHHHHHhccCchhhhhhhhcccccccccC
Q psy14174         68 AMQISLEVLDVLLSRLALNDDCKELFVLLQRPNLQGLLCAHDAVAQKDYY  117 (269)
Q Consensus        68 ~~~~~~~v~~~l~~~~~~~~~~~el~~ll~~p~~~~ll~a~d~v~~~~~~  117 (269)
                      |+++++||++.|+..+. +++++||.+||++||||+||++||+||++.|.
T Consensus         1 Avq~A~eVle~L~~~~~-~~e~~EL~~lL~~PH~~aLL~aHD~VA~k~Y~   49 (50)
T d1y74b1           1 AVQRAKEVLEEISCYPE-NNDAKELKRILTQPHFMALLQTHDVVAHEVYS   49 (50)
T ss_dssp             CHHHHHHHHHHHHTCSS-CHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred             CcHHHHHHHHHHhcccC-ChHHHHHHHHHhCHHHHHHHHHHHHHHHHhcc
Confidence            57899999999998765 89999999999999999999999999999985

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.28  E-value=7.4e-13  Score=105.41  Aligned_cols=46  Identities=22%  Similarity=0.496  Sum_probs=43.4

Q ss_pred             cccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        224 RESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       224 ~~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+..|+|||+|||+|..|..+||++.||+|++||||+|++++|.+|
T Consensus        20 ~~~~f~vra~~dy~~~~d~~~p~~~~~LsF~kGDii~V~~~~d~~W   65 (145)
T d1vyva1          20 KPVAFAVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDW   65 (145)
T ss_dssp             SCCCEEEEESSCBCTTSCCSCSSTTCBCCBCTTCEEEEEEEEETTE
T ss_pred             CCccEEEEEeeeeCCccCCcCCcccccccCcCCCEEEEeeccCCCc
Confidence            3456799999999999999999999999999999999999999999

>d2z9ia1 b.36.1.4 (A:227-314) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: HtrA-like serine proteases
domain: Protease PepD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.08  E-value=2.1e-10  Score=83.14  Aligned_cols=70  Identities=20%  Similarity=0.380  Sum_probs=58.7

Q ss_pred             CCCCeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeC
Q psy14174        145 EPLGATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPA  217 (269)
Q Consensus       145 ~~lG~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~  217 (269)
                      ..||+.+.......|++|.+|.+||||+++| |++||+|++|||+++.+  ..++...++.  .+..++|++.+.
T Consensus         3 ~~LGv~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~i~~--~~~~~~~i~~~~~g~~v~l~v~r~   74 (88)
T d2z9ia1           3 ASLGVQVTNDKDTLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINS--ADALVAAVRSKAPGATVALTFQDP   74 (88)
T ss_dssp             EECCEEEECCC-CCSEEEEEECTTSTTGGGT-CCTTCEEEEETTEECCS--HHHHHHHHHTSCTTCEEEEEEEET
T ss_pred             CEEeEEEEecCCCCcEEEEEECCCCHHHHcC-CCCCCEEEEeCCCcCCc--HHHHHHHHHhCCCCCEEEEEEEEC
Confidence            3589999887766799999999999999999 69999999999999964  4566666654  568999999874

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.94  E-value=7.3e-11  Score=87.07  Aligned_cols=40  Identities=43%  Similarity=0.742  Sum_probs=37.4

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      |||||+|||+|..|+.+||.  .|+|++||||+|+++.|+.|
T Consensus         2 ~~vrAlydy~~~~d~~~~~~--eLsf~kGdil~V~~~~d~~W   41 (96)
T d1kjwa1           2 FYIRALFDYDKTKDCGFLSQ--ALSFRFGDVLHVIDAGDEEW   41 (96)
T ss_dssp             EEEEESSCBCHHHHHCCCSS--BCCBCTTCEEEEEECCSSSE
T ss_pred             EEEEEcccCcCCcCCCCCCc--cceEcCCCEEEEeeeccCce
Confidence            79999999999998888887  59999999999999999988

>d1ky9b2 b.36.1.4 (B:359-446) Protease Do (DegP, HtrA), C-terminal domains {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: HtrA-like serine proteases
domain: Protease Do (DegP, HtrA), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=98.93  E-value=2.3e-10  Score=82.92  Aligned_cols=68  Identities=24%  Similarity=0.394  Sum_probs=56.8

Q ss_pred             CeEEeccCCCCcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        148 GATIKTDEESGKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       148 G~ti~~~~~~~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      |+.+.......|++|..|.+||||+++| |++||.|++|||+++.  +.+++..++++.++.+.|+|.+.+
T Consensus        15 g~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~--~~~~~~~~l~~~~~~v~l~v~R~~   82 (88)
T d1ky9b2          15 GAEMSNKGKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NIAELRKVLDSKPSVLALNIQRGD   82 (88)
T ss_dssp             --CBCCCTTTSCCCBCCCCSSCTTGGGT-CCSSCEEEEETTEECS--SHHHHHHHTTTCCSCCCEEEESSS
T ss_pred             EEEEeecCCCCeEEEEEECCCCHHHHcC-CCCCcEEEEECCEEcC--CHHHHHHHHHhCCCEEEEEEEECC
Confidence            4444443335689999999999999999 6999999999999995  678999999999999999999854

>d1k32a1 b.36.1.3 (A:763-853) Tricorn protease {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: Tail specific protease PDZ domain
domain: Tricorn protease
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.87  E-value=6.5e-09  Score=75.65  Aligned_cols=69  Identities=17%  Similarity=0.301  Sum_probs=57.8

Q ss_pred             CCCeEEeccCCCCcEEEEEecCC--------ChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc-CCCeEEEEEEe
Q psy14174        146 PLGATIKTDEESGKIVVARVMHG--------GAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS-SEGTITFKLIP  216 (269)
Q Consensus       146 ~lG~ti~~~~~~~~i~V~~V~~g--------g~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~l~v~p  216 (269)
                      .||+-++-.  ++++.|.+|.+|        |||+++|+.++||+|++|||+++.+.  .++.++|+. .+..|+|+|.+
T Consensus         2 ~lG~d~~~~--~~~~~I~~i~~G~~~~~~~~sPa~~aGl~k~GD~I~~IdG~~v~~~--~~~~~~l~g~~G~~V~L~i~R   77 (91)
T d1k32a1           2 RIACDFKLD--GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPTGYLIEDIDGETVGAG--SNIYRVLSEKAGTSARIRLSG   77 (91)
T ss_dssp             BCSEEEEEE--TTEEEEEEECBSCTTSTTCBCGGGGGTCCCTTCEEEEETTEECBTT--BCHHHHHHTTTTSEEEEEEEC
T ss_pred             cccEEEEEE--CCeEEEEEEecCCCCCcccCChhHhcCCCCCCCEEEEECCEeecCc--ceeEEEEecCCCCEEEEEEEe
Confidence            578777765  468999999998        99999996589999999999999765  477888876 57889999988


Q ss_pred             CC
Q psy14174        217 AD  218 (269)
Q Consensus       217 ~~  218 (269)
                      ..
T Consensus        78 ~g   79 (91)
T d1k32a1          78 KG   79 (91)
T ss_dssp             SS
T ss_pred             CC
Confidence            54

>d1rsob_ a.194.1.1 (B:) Peripheral plasma membrane protein cask {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: L27 domain
superfamily: L27 domain
family: L27 domain
domain: Peripheral plasma membrane protein cask
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.81  E-value=2.2e-09  Score=69.30  Aligned_cols=49  Identities=27%  Similarity=0.482  Sum_probs=46.6

Q ss_pred             chhHHHHHHHHHHhhcccccChhhHHHHHHHhcChhHHHHHhhhhcccc
Q psy14174         10 DISVSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVN   58 (269)
Q Consensus        10 ~~~~~~vL~~L~~~~~~~~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~   58 (269)
                      -.||++|||||++|+.++++.+.|-.||+++|+|..|+.|+++|+||..
T Consensus         6 ~~AV~~iLDSLddI~~Lqd~~~~d~d~L~~~~~D~~LhaLLelyDrI~t   54 (56)
T d1rsob_           6 ERAVSQVLDSLEEIHALTDSSEKDLDFLHSVFQDQHLHTLLDLYDKINT   54 (56)
T ss_dssp             THHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhHHHHHHHHcccccCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            4589999999999999999999999999999999999999999999975

>d1lcya1 b.36.1.4 (A:226-325) Mitochondrial serine protease HtrA2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: HtrA-like serine proteases
domain: Mitochondrial serine protease HtrA2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=2.9e-08  Score=73.02  Aligned_cols=57  Identities=18%  Similarity=0.412  Sum_probs=51.4

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHcCCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQSSEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~l~v~p~~  218 (269)
                      .|++|..|.++|||+++| |++||.|++|||.++.  +.+++.+.++ .+..+.++|.+.+
T Consensus        31 ~Gv~V~~V~~~spA~~aG-l~~GDiI~~ing~~V~--s~~dl~~~l~-~g~~v~l~v~R~g   87 (100)
T d1lcya1          31 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVR-TQSQLAVQIRRGR   87 (100)
T ss_dssp             SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHT-TCSSEEEEEEETT
T ss_pred             CcEEEEEECCCchHhhcC-CCCCcEEEEECCEEcC--CHHHHHHHhc-CCCEEEEEEEECC
Confidence            589999999999999999 6999999999999995  5678998884 7889999999975

>d2i6va1 b.36.1.5 (A:219-305) General secretion pathway protein C, EpsC {Vibrio cholerae [TaxId: 666]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: EpsC C-terminal domain-like
domain: General secretion pathway protein C, EpsC
species: Vibrio cholerae [TaxId: 666]

Probab=98.46  E-value=2.5e-07  Score=66.40  Aligned_cols=58  Identities=16%  Similarity=0.197  Sum_probs=50.5

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|+.|..+.++++|+++| |++||+|++|||.++.  +..++..+++.  .+..++++|.+.+
T Consensus        19 ~G~~v~~v~~~s~~~~aG-l~~GDiI~~ing~~v~--~~~~~~~~~~~~~~~~~~~l~v~R~g   78 (87)
T d2i6va1          19 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDG   78 (87)
T ss_dssp             EEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETT--CHHHHHHHHHTGGGCSEEEEEEEETT
T ss_pred             EEEEEecCCCCCHHHHCC-CCCCCEEEEECCEEee--cHHHHHHHHHhhccccccEEEEEECC
Confidence            478899999999999999 6999999999999995  56678888765  5788999999976

>d2hgaa1 b.36.1.6 (A:23-125) Uncharacterized protein MTH1368 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: MTH1368 C-terminal domain-like
domain: Uncharacterized protein MTH1368
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=98.45  E-value=3.8e-07  Score=67.41  Aligned_cols=57  Identities=14%  Similarity=0.187  Sum_probs=49.5

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|..|.+|+||++ + |++||+|++|||..+.  +..++...++.  .+..|++++.+.+
T Consensus         3 ~Gv~V~~V~~~sPA~~-~-L~~GD~I~~ing~~v~--~~~~l~~~i~~~~~G~~v~l~v~R~~   61 (103)
T d2hgaa1           3 DGVQIDSVVPGSPASK-V-LTPGLVIESINGMPTS--NLTTYSAALKTISVGEVINITTDQGT   61 (103)
T ss_dssp             CCEEEEEECSSSGGGG-T-SCTTCEEEEETTEECS--SHHHHHHHHTTCCTTCEEEEEETTEE
T ss_pred             CcEEEEEECCCChHHh-c-CCCCCEEEEECCEEcC--CHHHHHHHHhhCCCCCEEEEEEEECC
Confidence            4899999999999986 6 7999999999999995  67899999965  4788999997743

>d1ky9a1 b.36.1.4 (A:260-353) Protease Do (DegP, HtrA), C-terminal domains {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: HtrA-like serine proteases
domain: Protease Do (DegP, HtrA), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=98.39  E-value=6.9e-08  Score=70.28  Aligned_cols=58  Identities=19%  Similarity=0.341  Sum_probs=50.4

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|..|.++|||+++| |+.||.|++|||.++.+  ..++..++..  .+..+.++|.+.+
T Consensus        27 ~Gv~V~~V~~~spA~~aG-l~~gDvI~~i~g~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g   86 (94)
T d1ky9a1          27 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISS--FAALRAQVGTMPVGSKLTLGLLRDG   86 (94)
T ss_dssp             CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCS--SHHHHHHTTSSBTTCCCEEEEESSS
T ss_pred             CCcEEEECCCChhHHHhC-CCcccEEEEECCEEeCC--HHHHHHHHHhCCCCCEEEEEEEECC
Confidence            589999999999999999 69999999999999954  5677888865  4788999999865

>d1sota1 b.36.1.4 (A:255-353) Stress sensor protease DegS, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PDZ domain-like
superfamily: PDZ domain-like
family: HtrA-like serine proteases
domain: Stress sensor protease DegS, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.36  E-value=9.5e-08  Score=70.21  Aligned_cols=58  Identities=22%  Similarity=0.305  Sum_probs=46.1

Q ss_pred             CcEEEEEecCCChhhhcCCCCCCCeEEEECCEecCCCChHHHHHHHHc--CCCeEEEEEEeCC
Q psy14174        158 GKIVVARVMHGGAADRSGLIHVGDEVCEVNGINVEGKTPGDVLKILQS--SEGTITFKLIPAD  218 (269)
Q Consensus       158 ~~i~V~~V~~gg~A~r~GlL~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~l~v~p~~  218 (269)
                      .|++|..|.++|||+++| |++||.|++|||.++.+  ..++...+.+  .+..+.+++.+.+
T Consensus        26 ~Gv~V~~V~~~spA~~aG-l~~GDiI~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g   85 (99)
T d1sota1          26 QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPVVVMRDD   85 (99)
T ss_dssp             -CEECCCCCSSSTTTSSS-CCTTCEECBSSSSBCCC--SHHHHHHHHHSCTTCEEEECC----
T ss_pred             CccEEEEecCCCCHHHcC-CCcceEEEEECCEeccc--HHHHHHHHHcCCCCCEEEEEEEECC
Confidence            489999999999999999 69999999999999965  4567676643  5788999998865

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=4.3e-07  Score=59.92  Aligned_cols=35  Identities=37%  Similarity=0.769  Sum_probs=31.6

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      -|+||+|||.+..       +..|+|++|||+.|+++.|..|
T Consensus         2 ~~v~Alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   36 (57)
T d1ckaa_           2 EYVRALFDFNGND-------EEDLPFKKGDILRIRDKPEEQW   36 (57)
T ss_dssp             CEEEESSCBCCSS-------TTBCCBCTTCEEEEEECSSSSE
T ss_pred             CEEEECCCCCcCC-------cCCcCCCCCCEEEEEEEcCCCe
Confidence            3799999999987       5579999999999999999988

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=1.1e-06  Score=57.76  Aligned_cols=35  Identities=40%  Similarity=0.853  Sum_probs=31.6

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .|+||++||.+..       +..|+|++||++.|+++.++.|
T Consensus         2 tyv~Alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   36 (56)
T d1gcqa_           2 TYVQALFDFDPQE-------DGELGFRRGDFIHVMDNSDPNW   36 (56)
T ss_dssp             EEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             EEEEECcCCCcCC-------cCCcCCCCCCEEEEEEecCCCE
Confidence            5899999999987       5579999999999999988888

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.10  E-value=1.1e-06  Score=57.87  Aligned_cols=35  Identities=26%  Similarity=0.654  Sum_probs=31.7

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      -|+||+|+|.+..       +..|+|++||++.|+++.|++|
T Consensus         2 ~yarAlydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   36 (57)
T d1utia_           2 RWARALYDFEALE-------EDELGFRSGEVVEVLDSSNPSW   36 (57)
T ss_dssp             CEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             EEEEECcCCCCCC-------cCCcCCCCCCEEEEeEEcCCCE
Confidence            3789999999887       5579999999999999999988

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=98.08  E-value=1.3e-06  Score=57.74  Aligned_cols=36  Identities=31%  Similarity=0.763  Sum_probs=32.5

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..++||+++|.+..       +..|+|++||++.|+++.|+.|
T Consensus         2 ~~~~~Alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W   37 (58)
T d1sema_           2 TKFVQALFDFNPQE-------SGELAFKRGDVITLINKDDPNW   37 (58)
T ss_dssp             CCEEEESSCBCCSS-------TTBCCBCTTCEEEEEECSSSSE
T ss_pred             CEEEEECCCCCcCC-------cCCcCCCCCCEEEEeEEcCCCE
Confidence            45899999999887       5689999999999999999988

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=2.3e-06  Score=57.26  Aligned_cols=37  Identities=35%  Similarity=0.662  Sum_probs=32.7

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+||+|+|.+..       +..|+|++||++.|+++.|++|
T Consensus         4 ~g~~v~Aly~y~a~~-------~~eLsf~~Gd~i~vl~~~~~~W   40 (62)
T d1k4us_           4 KGSQVEALFSYEATQ-------PEDLEFQEGDIILVLSKVNEEW   40 (62)
T ss_dssp             CCEEEECCSCBCCCS-------SSBCCBCSSCEEEEEEESSSSC
T ss_pred             CCCEEEECCCCCCCC-------cCCcCCCCCCEEEEeEEcCCCE
Confidence            345789999999987       5679999999999999999999

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=3.3e-06  Score=61.48  Aligned_cols=44  Identities=18%  Similarity=0.115  Sum_probs=35.3

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...-+++|+|||+|.. ...++.+..|+|++||||.|+++.|.+|
T Consensus        15 ~~~~~~~Alydy~~~~-~~~~~~e~ELsf~~Gd~i~v~~~~~~~g   58 (96)
T d1wiea_          15 GKVHLCVARYSYNPFD-GPNENPEAELPLTAGKYLYVYGDMDEDG   58 (96)
T ss_dssp             SCEEEEEESSCCCGGG-SSCSCTTTBCCCCTTCEEEEESSCCSSS
T ss_pred             CCceEEEEeeeecCcc-cCCCCCCcEeeEcCCCEEEEEEeeCCCc
Confidence            3446788999999953 3456777789999999999999887764

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.99  E-value=2.5e-06  Score=56.30  Aligned_cols=35  Identities=40%  Similarity=0.849  Sum_probs=31.4

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .++||+|+|.+..       +..|+|++||++.|+++.|..|
T Consensus         3 rr~~Alydy~~~~-------~~eLsf~~Gd~i~v~~~~~~~W   37 (58)
T d1uj0a_           3 RRVRALYDFEAVE-------DNELTFKHGELITVLDDSDANW   37 (58)
T ss_dssp             EEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             CEEEECCCCCCCC-------cCCcCCCCCCEEEEeEEeCCCE
Confidence            4689999999987       5579999999999999999888

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=9.7e-07  Score=60.78  Aligned_cols=38  Identities=34%  Similarity=0.592  Sum_probs=33.3

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....++||+|+|.+..       +..|+|++||||+|+++.|.+|
T Consensus         4 ~~~~~v~Aly~f~a~~-------~~eLsf~~Gd~i~v~~~~~~~W   41 (71)
T d2hspa_           4 TFKCAVKALFDYKAQR-------EDELTFIKSAIIQNVEKQEGGW   41 (71)
T ss_dssp             CSSSCEECCSCCCCSS-------SSSCCCCTTCEEBSCCCBTTTE
T ss_pred             CCcEEEEEcccCCcCC-------cCCccCCCCCEEEEEEecCCCE
Confidence            3456899999999987       4579999999999999999888

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.95  E-value=2.9e-06  Score=55.90  Aligned_cols=34  Identities=32%  Similarity=0.562  Sum_probs=31.1

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      |+||+|+|.+..       +..|+|++||+|+|+.+.|+.|
T Consensus         2 ~~~Alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   35 (58)
T d1jo8a_           2 WATAEYDYDAAE-------DNELTFVENDKIINIEFVDDDW   35 (58)
T ss_dssp             CEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             EEEEccCCCCCC-------cCCcCCCCCCEEEEEEEcCCCE
Confidence            789999999987       4579999999999999999988

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=97.94  E-value=3.2e-06  Score=54.68  Aligned_cols=33  Identities=18%  Similarity=0.420  Sum_probs=30.2

Q ss_pred             eeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       230 vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      |.|+|||.+..       +..|+|++||++.|+++.|++|
T Consensus         1 V~Alydy~a~~-------~~eLs~~~Gd~~~vl~~~~~~W   33 (53)
T d2rn8a1           1 VIALYDYQTND-------PQELALRCDEEYYLLDSSEIHW   33 (53)
T ss_dssp             EEESSCCCCSS-------TTBCCCCTTCEEEECCCSCSSC
T ss_pred             CEEeeeECCCC-------CCeeeECCCCEEEEeEEcCCCe
Confidence            68999999987       5679999999999999999999

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=4.6e-06  Score=58.01  Aligned_cols=38  Identities=29%  Similarity=0.623  Sum_probs=33.1

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+.+||+|||++..       +..|+|++||+|.|+++.|..|
T Consensus         8 ~~~~~~rAlydy~a~~-------~~eLs~~~Gd~i~v~~~~~~~W   45 (76)
T d1ujya_           8 SHQLIVKARFNFKQTN-------EDELSVCKGDIIYVTRVEEGGW   45 (76)
T ss_dssp             CCCEEEECCSCBCCSS-------TTSCCBCSSCCEEESSCCSSSC
T ss_pred             CCCEEEEECccCCCCC-------CCCccCCCCCEEEEeEEcCCCE
Confidence            3457899999999987       4579999999999999988888

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.82  E-value=7.6e-06  Score=53.27  Aligned_cols=34  Identities=32%  Similarity=0.628  Sum_probs=30.7

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .++|+|+|.+..       +..|+|++||++.|+++.+.+|
T Consensus         2 ~~vAl~dy~~~~-------~~eLs~~~Gd~v~v~~~~~~~W   35 (55)
T d1u06a1           2 LVLALYDYQEKS-------PREVTMKKGDILTLLNSTNKDW   35 (55)
T ss_dssp             EEEECSCBCCCS-------TTBCCBCTTCEEEEEECCSSSE
T ss_pred             EEEECCCCCCCC-------cCCccCCCCCEEEEeEEcCCCE
Confidence            478999999887       5679999999999999999988

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1.2e-05  Score=52.78  Aligned_cols=34  Identities=29%  Similarity=0.654  Sum_probs=30.5

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+||++||.+..       +..|+|++||++.|+.+.|..|
T Consensus         4 ~~~al~dy~~~~-------~~eLs~~~Gd~i~vl~~~~~~W   37 (58)
T d1ng2a1           4 TYRAIADYEKTS-------GSEMALSTGDVVEVVEKSESGW   37 (58)
T ss_dssp             EEECSSCBCCSS-------TTCCCBCTTCEEEEEECCTTSC
T ss_pred             EEEECccCcCCC-------CCCcCCCCCCEEEEEEecCCCe
Confidence            468999999877       5689999999999999999888

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=9.8e-06  Score=58.92  Aligned_cols=36  Identities=39%  Similarity=0.778  Sum_probs=32.2

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..+++|+|||++..       +..|+|++|||+.|+++.|+.|
T Consensus        34 ~~~~~Alydy~a~~-------~~ELsf~~Gd~i~Vl~~~~~gW   69 (98)
T d1udla_          34 VCQVIAMYDYAANN-------EDELSFSKGQLINVMNKDDPDW   69 (98)
T ss_dssp             SEEEEESSCCCCSS-------TTSCCCCTTCEEEECBCCSSSE
T ss_pred             ccEEEEccCCCCCC-------CCEeeEcCCCEEEEeEecCCCe
Confidence            45789999999987       5579999999999999999888

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.73  E-value=1.2e-05  Score=55.24  Aligned_cols=37  Identities=27%  Similarity=0.544  Sum_probs=29.5

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCC-C
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAY-W  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~-W  269 (269)
                      ..++||+|+|.+..|+      ..|+|++||||+|+.+.+.+ |
T Consensus         7 ~~~~~Alydy~~~~~~------deLsf~~Gd~i~vl~~~~~~gW   44 (72)
T d1spka_           7 GQKVKTIFPHTAGNNK------TLLSFAQGDVLTLLIPEEKDGW   44 (72)
T ss_dssp             SCEEECSSCBCCSSCS------SBCCBCTTCEEEECCSSCBTTE
T ss_pred             CCEEEEeeccCCCCCC------CEeeEcCCCEEEEEEeecCCCe
Confidence            3578999999986543      36999999999999876654 5

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.3e-05  Score=56.09  Aligned_cols=36  Identities=19%  Similarity=0.372  Sum_probs=32.2

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..++||+|+|.+..       +..|+|++||||+|+++.|..|
T Consensus         7 g~~~~al~~y~~~~-------~~eLs~~~Gd~i~Vl~~~~~~W   42 (80)
T d1ue9a_           7 GEIAQVTSAYVASG-------SEQLSLAPGQLILILKKNTSGW   42 (80)
T ss_dssp             CEEEEECSCCCCCS-------TTBCCCCTTCEEEEEEECSSSE
T ss_pred             CCEEEECcCCCCCC-------CCEeeEcCCCEEEEEEEeCCCe
Confidence            35789999999988       5589999999999999999888

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.2e-05  Score=53.86  Aligned_cols=33  Identities=24%  Similarity=0.570  Sum_probs=28.4

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAY  268 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~  268 (269)
                      .|+|+|||.+..       +..|+|++||++.|++++|++
T Consensus         6 ~v~Alydy~a~~-------~~ELs~~~Gd~i~vl~~~~~~   38 (63)
T d1ycsb2           6 VIYALWDYEPQN-------DDELPMKEGDCMTIIHREDED   38 (63)
T ss_dssp             EEEESSCBCCSS-------TTBCCBCSSCEEEECCCCTTS
T ss_pred             EEEEeeCCCCCC-------CCCcCCCCCCEEEEEEecCCC
Confidence            588999999987       557999999999999887654

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=1.5e-05  Score=53.94  Aligned_cols=35  Identities=23%  Similarity=0.502  Sum_probs=31.0

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      -.|+|+|||.+..       +..|+|++||++.|+++.+..|
T Consensus         3 ~~v~Alydf~a~~-------~~eLs~~~Gd~i~v~~~~~~~W   37 (67)
T d1gl5a_           3 EIVVAMYDFQATE-------AHDLRLERGQEYIILEKNDLHW   37 (67)
T ss_dssp             SCEEECSCBCCSS-------SSBCCBCTTCEEEEEECSSSSE
T ss_pred             EEEEECCCCCCCC-------cCCcCCCCCCEEEEEEecCCCc
Confidence            3689999999987       4569999999999999999888

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.6e-05  Score=51.93  Aligned_cols=32  Identities=31%  Similarity=0.755  Sum_probs=28.5

Q ss_pred             eeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        231 RAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       231 Ra~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      +|++||++..       +..|+|++||+++|+++++.+|
T Consensus         4 vAl~dy~a~~-------~~eLs~~~Gd~i~v~~~~~~~W   35 (57)
T d1efna_           4 VALYDYEAIT-------EDDLSFHKGEKFQILNSSEGDW   35 (57)
T ss_dssp             EESSCBCCSS-------TTBCCBCTTCEEEEEECSSCSE
T ss_pred             EECCCCCCCC-------cCCcCCCCCCEEEEEEecCCCC
Confidence            4999999987       4579999999999999998888

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.4e-05  Score=55.13  Aligned_cols=38  Identities=29%  Similarity=0.629  Sum_probs=31.8

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...+++||+|||.+..       +..|+|++||||+|++++|.-|
T Consensus         8 ~~~~~~~alydy~a~~-------~~ELs~~~Gd~i~vl~~~~~ww   45 (74)
T d1j3ta_           8 VENLKAQALCSWTAKK-------DNHLNFSKHDIITVLEQQENWW   45 (74)
T ss_dssp             CCCCEEEESSCBCCCS-------TTBCCBCTTCEEEEEEECSSEE
T ss_pred             CCCeEEEEccCCCCCC-------CCEecCCCCCEEEEEEccCCeE
Confidence            3567899999999988       5579999999999999876533

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.65  E-value=1.9e-05  Score=54.48  Aligned_cols=37  Identities=16%  Similarity=0.298  Sum_probs=32.4

Q ss_pred             cceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        226 SKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       226 ~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++||+|||.+..       +..|+|++||+++|+++.+.+|
T Consensus         6 ~g~~~~al~dy~~~~-------~~eLs~~~Gd~i~vl~~~~~~W   42 (74)
T d1wfwa_           6 SGSTMTVIKDYYALK-------ENEICVSQGEVVQVLAVNQQNM   42 (74)
T ss_dssp             CSCEEECCSCBCCCS-------SSCCCBCTTCEEEEEEECTTSE
T ss_pred             CCCEEEEeEEECCCC-------CCCccCccCCEEEEEEEcCCCC
Confidence            346889999999887       5579999999999999988888

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.4e-05  Score=54.08  Aligned_cols=38  Identities=24%  Similarity=0.460  Sum_probs=32.9

Q ss_pred             ccceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        225 ESKIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       225 ~~~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ....+++|+|+|.+..       +..|+|++||+|.|+++.+..|
T Consensus         6 ~~~~~v~Alydy~a~~-------~~eLs~~~Gd~i~v~~~~~~~W   43 (67)
T d1awwa_           6 SELKKVVALYDYMPMN-------ANDLQLRKGDEYFILEESNLPW   43 (67)
T ss_dssp             SCCCEEEBSSCCCCSS-------SSSCCCCSSCEEECCCCCSSSE
T ss_pred             CCCEEEEECcCCCCCC-------cCCcCCCCCCEEEEEEEcCCCe
Confidence            3455789999999987       5579999999999999988888

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.8e-05  Score=52.54  Aligned_cols=36  Identities=33%  Similarity=0.646  Sum_probs=30.9

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...++|++||++..       +..|+|++||+|+|++++|..|
T Consensus         6 ~~~~~al~dy~a~~-------~~eLs~~~Gd~i~v~~~~~~ww   41 (62)
T d2iima1           6 DNLVIALHSYEPSH-------DGDLGFEKGEQLRILEQSGEWW   41 (62)
T ss_dssp             TCEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSSEE
T ss_pred             CcEEEECCCCCcCC-------cCCcCCCCCCEEEEeEEcCCCE
Confidence            34689999999987       5579999999999999988755

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.63  E-value=1.8e-05  Score=51.46  Aligned_cols=33  Identities=18%  Similarity=0.370  Sum_probs=29.0

Q ss_pred             eeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       230 vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .||+|||.+..       +..|+|++||+|.|++.+|.+|
T Consensus         2 aralydf~a~~-------~~ELs~~~Gd~i~v~~~~~~~~   34 (56)
T d1zuua1           2 NKVLYAYVQKD-------DDEITITPGDKISLVARDTGSG   34 (56)
T ss_dssp             CEECSCBCCCS-------TTBCCBCTTCCEEEEECCSSSS
T ss_pred             CEEeeeeCCCC-------CCEeeECCCCEEEEEEEecCCC
Confidence            58999999987       5579999999999999888775

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=2e-05  Score=52.83  Aligned_cols=36  Identities=39%  Similarity=0.747  Sum_probs=30.5

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ...|+|++||.+..       +..|+|++||+|.|+++++..|
T Consensus         4 ~~~vvAlydy~~~~-------~~eLs~~~Gd~i~v~~~~~~ww   39 (65)
T d1qcfa1           4 RIIVVALYDYEAIH-------HEDLSFQKGDQMVVLEESGEWW   39 (65)
T ss_dssp             CCEEEESSCBCCCS-------TTBCCBCTTCEEEEEECCTTEE
T ss_pred             cEEEEECCcCCCCC-------cCccCCCCCCEEEEEEECCCCE
Confidence            45789999999987       5579999999999999877654

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=8.4e-06  Score=53.97  Aligned_cols=34  Identities=35%  Similarity=0.554  Sum_probs=30.4

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+||+|||++..       +..|+|++||++.|+++.|..|
T Consensus         5 ~~rAl~df~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   38 (60)
T d1arka_           5 IFRAMYDYMAAD-------ADEVSFKDGDAIINVQAIDEGW   38 (60)
T ss_dssp             CEECCSCCCCSS-------SSBCCCCTTCEECCSEECSSSE
T ss_pred             EEEECccCCCCC-------CCCcCCCCCCEEEEEEEcCCCE
Confidence            569999999887       5579999999999999999888

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.58  E-value=3.7e-05  Score=50.40  Aligned_cols=32  Identities=22%  Similarity=0.608  Sum_probs=28.2

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDA  267 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~  267 (269)
                      +++|+|+|.+..       +..|+|++||+|.|+.+.|.
T Consensus         3 ~~~Alydy~a~~-------~~ELs~~~Gd~v~vl~~~~~   34 (58)
T d1oota_           3 KAVALYSFAGEE-------SGDLPFRKGDVITILKKSDS   34 (58)
T ss_dssp             EEEESSCBCCCS-------TTBCCBCTTCEEEEEECCSC
T ss_pred             eEEEccCCCCCC-------CCCccCCCCCEEEEEEeecC
Confidence            689999999887       55799999999999998765

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.54  E-value=1.8e-05  Score=52.13  Aligned_cols=35  Identities=23%  Similarity=0.571  Sum_probs=29.7

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      -+.||+|||.+..       +..|+|++||+|.|++++|.-|
T Consensus         2 ~~a~alydf~a~~-------~~ELs~~~Gd~i~v~~~~~~ww   36 (59)
T d1i07a_           2 KYAKSKYDFVARN-------SSELSVMKDDVLEILDDRRQWW   36 (59)
T ss_dssp             CEEEESSCBCCSS-------TTBCCBCTTCEEEECGGGCCEE
T ss_pred             eEEEEccCCCCCC-------CCeeeEcCCCEEEEEEEcCCcE
Confidence            3789999999987       5579999999999999877533

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=3.3e-05  Score=55.30  Aligned_cols=34  Identities=29%  Similarity=0.474  Sum_probs=28.7

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAY  268 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~  268 (269)
                      ...||+|+|.+..       +..|+|++||||+|+.+++.+
T Consensus         6 ~~~rAlydy~~~~-------~~ELs~~~Gd~v~Vl~~~~~~   39 (93)
T d1uffa_           6 SGYRALYPFEARN-------HDEMSFNSGDIIQVDEKTVGE   39 (93)
T ss_dssp             CCEEESSCBCCCS-------SSCCCBCTTCEEEECSSCCCS
T ss_pred             eEEEECccCCCCC-------CCCccCcCCCEEEEEEeccCC
Confidence            4669999999987       567999999999999877543

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.52  E-value=2.7e-05  Score=52.64  Aligned_cols=35  Identities=23%  Similarity=0.480  Sum_probs=28.5

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDA  267 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~  267 (269)
                      ..++||+|+|.+..+      +..|+|++||+++|+++.|+
T Consensus         5 ~~~~~Alydy~~~~~------~~ELs~~~Gd~i~vl~~~d~   39 (67)
T d2v1ra1           5 LEFARALYDFVPENP------EMEVALKKGDLMAILSKKDP   39 (67)
T ss_dssp             CEEEEESSCBCCSST------TTBCCBCTTCEEEEEEEECT
T ss_pred             CEEEEECccCCCCCC------CCEeCCCCCCEEEEEEeecC
Confidence            357999999998752      23699999999999998763

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=2.2e-05  Score=53.82  Aligned_cols=36  Identities=22%  Similarity=0.307  Sum_probs=30.3

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..++||+|+|.+..       +..|+|++||||.|+++.+.+|
T Consensus        10 ~~~~~alydy~~~~-------~~eLs~~~Gd~i~v~~~~~~~~   45 (72)
T d1ugva_          10 FRKAKALYACKAEH-------DSELSFTAGTVFDNVHPSQEPG   45 (72)
T ss_dssp             CCCEEESSCBCCCS-------SSBCCBCTTCEEBSCCBCSSTT
T ss_pred             CEEEEEcccCCCCC-------CCEecCCCCCEEEEeeccCCCC
Confidence            34789999999987       4579999999999999877653

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=7.4e-05  Score=47.99  Aligned_cols=32  Identities=22%  Similarity=0.289  Sum_probs=29.1

Q ss_pred             eeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        231 RAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       231 Ra~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .|+++|.+..       +..|+|++||++.|+++.|+.|
T Consensus         4 val~~y~a~~-------~~eLs~~~Gd~v~vl~~~~~gW   35 (53)
T d1wlpb1           4 VAIKAYTAVE-------GDEVSLLEGEAVEVIHKLLDGW   35 (53)
T ss_dssp             EECSCBCCCS-------SSBCCBCTTCEEEEEECCTTSS
T ss_pred             EEeeeECCCC-------CCEecCCCCCEEEEEeecCCce
Confidence            5999999887       6689999999999999999888

>d1vf6c_ a.194.1.1 (C:) Maguk p55 subfamily member 5, Patj {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: L27 domain
superfamily: L27 domain
family: L27 domain
domain: Maguk p55 subfamily member 5, Patj
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.42  E-value=5.3e-05  Score=46.38  Aligned_cols=45  Identities=27%  Similarity=0.535  Sum_probs=39.7

Q ss_pred             hHHHHHHHHHHhhccc--ccChhhHHHHHHHhcChhHHHHHhhhhcc
Q psy14174         12 SVSSLLETLQESQSTF--SANDEELLFLSSLLQSKELNALVHVHNSI   56 (269)
Q Consensus        12 ~~~~vL~~L~~~~~~~--~~~~~d~~~l~~~l~~~~~~~l~~~~~~~   56 (269)
                      .+..++.||++++...  .++++|+..+.++.+.++|++.+|+|+.+
T Consensus         4 e~edl~~slK~iqh~LvDsQSQeDi~l~lqLvqn~DFQnAfkIHNav   50 (51)
T d1vf6c_           4 DVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNRDFQNAFKIHNAV   50 (51)
T ss_dssp             HHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhhHHHHHHHhhcc
Confidence            5788999999998775  34689999999999999999999999865

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.36  E-value=8.2e-05  Score=52.26  Aligned_cols=33  Identities=27%  Similarity=0.554  Sum_probs=28.6

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD  266 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d  266 (269)
                      ..++||+|+|.+..       +..|+|++||+|.|++++|
T Consensus        12 ~~~~~Alydy~a~~-------~~ELs~~~Gd~i~Vl~~~~   44 (83)
T d1bb9a_          12 MFKVQAQHDYTATD-------TDELQLKAGDVVLVIPFQN   44 (83)
T ss_dssp             CEEEEESSCBCCSS-------TTBCCBCTTCEEEEECCSC
T ss_pred             CEEEEEceeECCCC-------CCEecCcCCCEEEEEEccC
Confidence            35799999999987       5589999999999998765

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.33  E-value=9.4e-05  Score=48.20  Aligned_cols=32  Identities=34%  Similarity=0.457  Sum_probs=27.2

Q ss_pred             eeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCC
Q psy14174        230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAY  268 (269)
Q Consensus       230 vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~  268 (269)
                      +.|+++|.+..       +..|+|++||+++|+++++..
T Consensus         3 ~vAlydy~a~~-------~~eLs~~~Gd~i~vl~~~~~~   34 (57)
T d1opka1           3 FVALYDFVASG-------DNTLSITKGEKLRVLGYNHNG   34 (57)
T ss_dssp             EEESSCBCCCS-------TTBCCBCTTCEEEEEEECTTS
T ss_pred             EEECccCCCCC-------cCCcCCCCCCEEEEeEecCCC
Confidence            47999999877       557999999999999876654

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=0.00012  Score=50.98  Aligned_cols=33  Identities=18%  Similarity=0.237  Sum_probs=28.3

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD  266 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d  266 (269)
                      ..++||+|+|.+..       +..|+|++||+|+|+++.|
T Consensus        13 ~~~~~Alydy~a~~-------~~ELs~~~Gd~i~vl~~~~   45 (79)
T d1uhca_          13 NQVYFAVYTFKARN-------PNELSVSANQKLKILEFKD   45 (79)
T ss_dssp             SCCEEESSCBCCCS-------SSBCCBCTTCEEEEEESCC
T ss_pred             CEEEEECccCCCCC-------CCCccCCCCCEEEEEEeec
Confidence            34689999999987       5689999999999998754

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00011  Score=50.00  Aligned_cols=36  Identities=28%  Similarity=0.673  Sum_probs=29.4

Q ss_pred             ceeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC-CCCC
Q psy14174        227 KIRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD-DAYW  269 (269)
Q Consensus       227 ~~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~-d~~W  269 (269)
                      ....+|+|||.+..       +..|+|++||+|.|+++. |..|
T Consensus         6 g~~~~Alydy~a~~-------~~ELs~~~Gd~i~vl~~~~~~~W   42 (71)
T d1k9aa1           6 GTECIAKYNFHGTA-------EQDLPFCKGDVLTIVAVTKDPNW   42 (71)
T ss_dssp             TCEEEESSCBCCSS-------SSBCCBCTTCEEEEEEECSSTTE
T ss_pred             CCEEEEccCCCCCC-------CCCccCCCCCEEEEeEeccCCCE
Confidence            34688999999977       557999999999999865 4455

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=7.3e-05  Score=49.83  Aligned_cols=33  Identities=33%  Similarity=0.775  Sum_probs=29.1

Q ss_pred             eeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        230 VRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       230 vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .+|++||++..       +..|+|++||+|+|+++.+++|
T Consensus         5 ~vAlydf~~~~-------~~eLs~~~Gd~i~v~~~~~~~W   37 (64)
T d1fmka1           5 FVALYDYESRT-------ETDLSFKKGERLQIVNNTEGDW   37 (64)
T ss_dssp             EEESSCBCCCS-------SSBCCBCTTCEEEESCCCSSSE
T ss_pred             EEECccCCCcC-------cCCcCCCCCCEEEEEEEcCCCc
Confidence            36999999887       5579999999999999988888

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=7.8e-05  Score=48.41  Aligned_cols=34  Identities=38%  Similarity=0.800  Sum_probs=24.4

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC-CCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD-AYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d-~~W  269 (269)
                      ..+|+|||.+..       +..|+|++||+|.|+++.+ +.|
T Consensus         2 ~a~Alydy~a~~-------~~ELs~~~Gd~v~v~~~~~~~~W   36 (56)
T d1gria1           2 EAIAKYDFKATA-------DDELSFKRGDILKVLNEECDQNW   36 (56)
T ss_dssp             EEEECSCBCCCS-------SSCCCBCTTCEEEC------CCE
T ss_pred             EEEEeeCCCCCC-------CCCcCCCCCCEEEEEeccCCCCe
Confidence            467999999887       5679999999999998654 445

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00012  Score=49.84  Aligned_cols=35  Identities=20%  Similarity=0.599  Sum_probs=29.1

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCC--CCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDD--AYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d--~~W  269 (269)
                      .++||++||.+..       +..|+|++||++.|+++.+  +.|
T Consensus         7 ~~~~Alydf~~~~-------~~eLs~~~Gd~i~vl~~~~~~~~W   43 (71)
T d1u5sa1           7 HVVQTLYPFSSVT-------EEELNFEKGETMEVIEKPENDPEW   43 (71)
T ss_dssp             SEEEESSCCCCCS-------SSBCCCCSSCCEEEEECCCTTTCE
T ss_pred             EEEEECccCCCCC-------CCEeeECCCCEEEEEEcccCCCCe
Confidence            4689999999987       4579999999999998643  456

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=9.6e-05  Score=50.13  Aligned_cols=34  Identities=24%  Similarity=0.498  Sum_probs=28.5

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      ..++|+|+|.+..       +..|+|++||+|.|++++| .|
T Consensus         9 ~~~vAl~~y~~~~-------~~eLs~~~Gd~v~vl~~~~-~W   42 (69)
T d1uhfa_           9 EEYIALYPYSSVE-------PGDLTFTEGEEILVTQKDG-EW   42 (69)
T ss_dssp             EEEECSSCBCCSS-------SSBCCBCTTCEEEECEEET-TE
T ss_pred             cEEEECccCCCCC-------cCCcCCCCCCEEEEEEecC-CE
Confidence            4568999999887       5579999999999998865 47

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00023  Score=53.02  Aligned_cols=34  Identities=21%  Similarity=0.253  Sum_probs=30.1

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~~W  269 (269)
                      .++|+|+|.+..       +..|+|++||||+|+++.|..|
T Consensus        16 ~~~alydy~a~~-------~dELs~~~Gd~i~Vl~~~~~gW   49 (118)
T d1ng2a2          16 PYVAIKAYTAVE-------GDEVSLLEGEAVEVIHKLLDGW   49 (118)
T ss_dssp             EEEESSCBCCCS-------TTBCCBCTTCEEEEEECCTTSE
T ss_pred             EEEECcCCCCCC-------CCEecCCCCCEEEEeEecCCCe
Confidence            446999999987       5589999999999999999888

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00014  Score=53.43  Aligned_cols=35  Identities=23%  Similarity=0.258  Sum_probs=29.2

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC---CCCCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ---DDAYW  269 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~---~d~~W  269 (269)
                      .++||+|+|.+..       +..|+|++|||+.|+.+   ++.+|
T Consensus        22 ~~~~Alydy~~~~-------~~eL~f~~Gd~i~Vl~k~~~~~~~W   59 (106)
T d1i1ja_          22 SMAVALQDYMAPD-------CRFLTIHRGQVVYVFSKLKGRGRLF   59 (106)
T ss_dssp             EEEEESSCBCCSS-------TTBCCBCTTCEEEEEEEECGGGTTE
T ss_pred             eEEEEccccCCCC-------CCCccCCCCCEEEEEEecCCCCcce
Confidence            4699999999887       56899999999999975   34556

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00047  Score=49.17  Aligned_cols=32  Identities=25%  Similarity=0.502  Sum_probs=27.9

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQDDA  267 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~d~  267 (269)
                      ..+|+++|.+..       +..|+|++|||+.|+++.|+
T Consensus        19 ~~~a~~~f~a~~-------~~eLs~~~Gd~v~vl~~~d~   50 (92)
T d1ug1a_          19 LFQAERNFNAAQ-------DLDVSLLEGDLVGVIKKKDP   50 (92)
T ss_dssp             EEEESSCCCCCS-------SSCCCCCTTCEEEEEESCCT
T ss_pred             EEEEcCCcCCCC-------CCeEEEecccEEEEEEcccc
Confidence            358999999987       66899999999999998774

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00037  Score=48.84  Aligned_cols=31  Identities=29%  Similarity=0.534  Sum_probs=26.9

Q ss_pred             eeeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeCC
Q psy14174        228 IRVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQD  265 (269)
Q Consensus       228 ~~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~~  265 (269)
                      ..+||+|+|.+..       +..|+|++||||.|+.+.
T Consensus         4 ~~~raly~y~~~~-------~~eLs~~~Gd~i~V~~~~   34 (83)
T d1phta_           4 YQYRALYDYKKER-------EEDIDLHLGDILTVNKGS   34 (83)
T ss_dssp             EEEEECSCBCCSS-------TTBCCBCTTCEEEEEHHH
T ss_pred             CEEEEcCccCCCC-------CCcccccCCCEEEEEecc
Confidence            5689999999988       567999999999999753

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.82  E-value=0.0048  Score=41.34  Aligned_cols=40  Identities=20%  Similarity=0.390  Sum_probs=25.6

Q ss_pred             eeeeecccCCCCCCCCCCCCCccccCCCCEEEEEeC-CCCCC
Q psy14174        229 RVRAHFDYDASSDPYIPCKDAGLSFNKGDILHVVSQ-DDAYW  269 (269)
Q Consensus       229 ~vRa~fdy~p~~D~~ipc~e~gL~F~~GDIL~vv~~-~d~~W  269 (269)
                      .++|..+|....+. .+.....|+|++|||+.|+++ .|..|
T Consensus         6 k~~a~~~y~~~~~~-~~~~~~eLsf~~GD~i~Vl~~~~~~gW   46 (69)
T d1gcqc_           6 KMEVFQEYYGIPPP-PGAFGPFLRLNPGDIVELTKAEAEHNW   46 (69)
T ss_dssp             EEEECSCBSSSSCC-GGGCSCBCCBCTTCEEEEEECCTTCSE
T ss_pred             cEEEeeeEeccCCC-CCCCCCEeeEcCCCEEEEEEEecCCCE
Confidence            45677777553211 112234699999999999975 45667

>d1vf6a_ a.194.1.1 (A:) Associated tight junction protein Pals-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: L27 domain
superfamily: L27 domain
family: L27 domain
domain: Associated tight junction protein Pals-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.0029  Score=40.19  Aligned_cols=43  Identities=21%  Similarity=0.294  Sum_probs=33.2

Q ss_pred             HHHHHHhhcc-----cccChhhHHHHHHHhcChhHHHHHhhhhccccc
Q psy14174         17 LETLQESQST-----FSANDEELLFLSSLLQSKELNALVHVHNSIVNE   59 (269)
Q Consensus        17 L~~L~~~~~~-----~~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~~   59 (269)
                      |..++++++.     ..+.++++..++++|+||-|+.++.++.++++.
T Consensus         2 lq~leRlQ~KL~erGD~s~~ekL~~lk~~LqSPLF~qiL~lQ~SiqqL   49 (58)
T d1vf6a_           2 LQVLDRLKMKLQEKGDTSQNEKLSMFYETLKSPLFNQILTLQQSIKQL   49 (58)
T ss_dssp             HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHccCCCcHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            4445554443     345678899999999999999999999888763

>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: L27 domain
superfamily: L27 domain
family: L27 domain
domain: Peripheral plasma membrane protein cask
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.032  Score=34.59  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=31.1

Q ss_pred             HHHHHHHHHHhhcccccChhhHHHHHHHhcChhHHHHHhhhhcccc
Q psy14174         13 VSSLLETLQESQSTFSANDEELLFLSSLLQSKELNALVHVHNSIVN   58 (269)
Q Consensus        13 ~~~vL~~L~~~~~~~~~~~~d~~~l~~~l~~~~~~~l~~~~~~~~~   58 (269)
                      ++..-+-++.++..  ....|..=|..+|..|.|++|+.+||.+.+
T Consensus         2 vq~A~eVle~L~~~--~~~~e~~EL~~lL~~PH~~aLL~aHD~VA~   45 (50)
T d1y74b1           2 VQRAKEVLEEISCY--PENNDAKELKRILTQPHFMALLQTHDVVAH   45 (50)
T ss_dssp             HHHHHHHHHHHHTC--SSCHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhcc--cCChHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            33334444444432  134668889999999999999999998764

>d1rsob_ a.194.1.1 (B:) Peripheral plasma membrane protein cask {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: L27 domain
superfamily: L27 domain
family: L27 domain
domain: Peripheral plasma membrane protein cask
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.31  E-value=0.53  Score=29.36  Aligned_cols=47  Identities=23%  Similarity=0.250  Sum_probs=36.2

Q ss_pred             hHHhHHHHHHHHhhccCCC-hhHHHHHHhccCchhhhhhhhccccccc
Q psy14174         68 AMQISLEVLDVLLSRLALN-DDCKELFVLLQRPNLQGLLCAHDAVAQK  114 (269)
Q Consensus        68 ~~~~~~~v~~~l~~~~~~~-~~~~el~~ll~~p~~~~ll~a~d~v~~~  114 (269)
                      |++-+-+-++.++.....+ .+...|...+.+.|+++||+-+|.|+++
T Consensus         8 AV~~iLDSLddI~~Lqd~~~~d~d~L~~~~~D~~LhaLLelyDrI~t~   55 (56)
T d1rsob_           8 AVSQVLDSLEEIHALTDSSEKDLDFLHSVFQDQHLHTLLDLYDKINTK   55 (56)
T ss_dssp             HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhHHHHHHHHcccccCHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            4455555666666665533 6778899999999999999999999765