Psyllid ID: psy14393

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110----
Protein Sequence
MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITMLS
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHcccccccccEEEEEccccccccccEEEEEEcccEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccHccccccHHHHcccHHHHHccEEEEEccccccccccEEEEEEccccEEEEEEEccccccccHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcc
Coil and Loop (DISEMBL)
mldeeiggsqgmsLFVTTDAFKKMNvgcaldegiaspTEVFALFNGERTIWQmkihcpgtpghgsllhentAAEKVNYIMNKFLALREEEKNKLkanknltigdvTTINITMLS
Flexible Loop (DISEMBL)
mldeeiggsqgmSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIMNKFLALREEEKnklkanknltigdvttinitmls
Low Complexity Region (SEG)
MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIMNKFlalreeeknklkanknlTIGDVTTINITMLS
Disordered region (IsUnstruct)
************SLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIMNKFLALREE****LKANKNLTIGDVTTINI****
Disordered Region (DISOPRED)
MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIMNKFLALREEEK*****N*NLTIGDVTTINITMLS
Disordered Region (DISEMBL)
********SQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITMLS
Disordered Region (DISPRO)
*****IGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITMLS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITMLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	114	2.2.26 [Sep-21-2011]
P37111	407	Aminoacylase-1 OS=Sus scr	yes	N/A	0.964	0.270	0.504	9e-28
Q6AYS7	408	Aminoacylase-1A OS=Rattus	yes	N/A	0.973	0.272	0.468	3e-26
Q03154	408	Aminoacylase-1 OS=Homo sa	no	N/A	0.973	0.272	0.477	3e-26
Q6PTT0	408	Aminoacylase-1B OS=Rattus	no	N/A	0.973	0.272	0.468	6e-26
Q99JW2	408	Aminoacylase-1 OS=Mus mus	yes	N/A	0.973	0.272	0.459	1e-25
Q5RFB0	408	Aminoacylase-1 OS=Pongo a	yes	N/A	0.973	0.272	0.468	2e-25
Q55DP8	408	Aminoacylase-1 OS=Dictyos	yes	N/A	0.973	0.272	0.469	2e-21

>sp|P37111|ACY1_PIG Aminoacylase-1 OS=Sus scrofa GN=ACY1 PE=1 SV=2

 Score =  122 bits (305), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 56/111 (50%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG QGM LFV    F+ +  G ALDEG+ASPT+ F +F  ER+ W +++   G PG
Sbjct: 146 DEEVGGHQGMELFVKRPEFQALRAGFALDEGLASPTDAFTVFYSERSPWWLRVTSTGKPG 205

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           HGS   E+TAAEK++ ++N  LA RE+EK +L++N+ L  G VT++N+TML
Sbjct: 206 HGSRFIEDTAAEKLHKVINSILAFREKEKQRLQSNQ-LKPGAVTSVNLTML 255

Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate).
Sus scrofa (taxid: 9823)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 1EC: 4

>sp|Q6AYS7|ACY1A_RAT Aminoacylase-1A OS=Rattus norvegicus GN=Acy1a PE=1 SV=1

 Score =  117 bits (292), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/111 (46%), Positives = 77/111 (69%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG +GM LFV    F+ +  G ALDEG+A+PT+ F +F  ER+ W +++   G PG
Sbjct: 146 DEEVGGHKGMELFVKRPEFQALRAGFALDEGLANPTDAFTVFYSERSPWWIRVTSTGKPG 205

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           H S   E+TAAEK++ ++N  LA RE+E+ +L+AN +L  G VT++N+T L
Sbjct: 206 HASRFIEDTAAEKLHKVVNSILAFREKERQRLQANPHLKEGAVTSVNLTKL 256

Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate).

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q03154|ACY1_HUMAN Aminoacylase-1 OS=Homo sapiens GN=ACY1 PE=1 SV=1

 Score =  116 bits (291), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/111 (47%), Positives = 75/111 (67%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG QGM LFV    F  +  G ALDEGIA+PT+ F +F  ER+ W +++   G PG
Sbjct: 146 DEEVGGHQGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRVTSTGRPG 205

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           H S   E+TAAEK++ ++N  LA RE+E  +L++N +L  G VT++N+T L
Sbjct: 206 HASRFMEDTAAEKLHKVVNSILAFREKEWQRLQSNPHLKEGSVTSVNLTKL 256

Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate).

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q6PTT0|ACY1B_RAT Aminoacylase-1B OS=Rattus norvegicus GN=Acy1b PE=1 SV=1

 Score =  115 bits (289), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 52/111 (46%), Positives = 75/111 (67%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG QGM LFV    F  +  G ALDEG+A+PT+ F +F  ER+ W +++   G PG
Sbjct: 146 DEEVGGHQGMELFVQRHEFHALRAGFALDEGLANPTDAFTVFYSERSPWWVRVTSTGRPG 205

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           H S   E+TAAEK++ ++N  LA RE+E  +L++N +L  G VT++N+T L
Sbjct: 206 HASRFMEDTAAEKLHKVVNSILAFREKEWQRLQSNPHLKEGSVTSVNLTKL 256

Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate).

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q99JW2|ACY1_MOUSE Aminoacylase-1 OS=Mus musculus GN=Acy1 PE=1 SV=1

 Score =  115 bits (287), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/111 (45%), Positives = 77/111 (69%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG +GM LFV    F+ +  G ALDEG+A+PT+ F +F  ER+ W +++   G PG
Sbjct: 146 DEEVGGHKGMELFVKRPEFQALRAGFALDEGLANPTDAFTVFYSERSPWWVRVTSTGKPG 205

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           H S   E+TAAEK++ +++  LA RE+E+ +L+AN +L  G VT++N+T L
Sbjct: 206 HASRFIEDTAAEKLHKVISSILAFREKERQRLQANPHLKEGAVTSVNLTKL 256

Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate).

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q5RFB0|ACY1_PONAB Aminoacylase-1 OS=Pongo abelii GN=ACY1 PE=2 SV=2

 Score =  114 bits (286), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/111 (46%), Positives = 75/111 (67%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG QGM LFV    F  +  G ALDEGIA+PT+ F +F  ER+ W +++   G PG
Sbjct: 146 DEEVGGHQGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRVTSTGRPG 205

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           H S   E+TAAEK++ +++  LA RE+E  +L++N +L  G VT++N+T L
Sbjct: 206 HASRFMEDTAAEKLHKVVSSILAFREKEWQRLQSNPHLKEGSVTSVNLTKL 256

Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate).

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q55DP8|ACY1_DICDI Aminoacylase-1 OS=Dictyostelium discoideum GN=acy1 PE=2 SV=1

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 74/115 (64%), Gaps = 4/115 (3%)

Query: 3   DEEIGGS-QGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTP 61
           DEEIGGS +GM  FV T+ F+++N+G  LDEG+ASPT  F +F GER  W + I   G  
Sbjct: 142 DEEIGGSGKGMEKFVYTEKFRQLNIGLCLDEGLASPTNDFTVFYGERAPWWVHITAVGNA 201

Query: 62  GHGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKN---LTIGDVTTINITML 113
           GHGS   E TA EK+   +NK LA R+E+   L   ++     +GDVT++N+T+L
Sbjct: 202 GHGSRFIEGTAIEKLMRTINKMLAFRQEQFESLHHGQHECGKKLGDVTSLNLTVL 256

Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate).

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
91090496	411	PREDICTED: similar to aminoacylase, puta	0.982	0.272	0.642	1e-37
357630813	399	hypothetical protein KGM_00092 [Danaus p	0.973	0.278	0.630	2e-35
114052174	411	aminoacylase [Bombyx mori] gi|87248447|g	0.982	0.272	0.598	6e-33
432857165	419	PREDICTED: aminoacylase-1A-like [Oryzias	0.973	0.264	0.558	6e-33
410919749	419	PREDICTED: aminoacylase-1A-like [Takifug	0.973	0.264	0.585	1e-32
348534238	419	PREDICTED: aminoacylase-1A-like [Oreochr	0.973	0.264	0.549	2e-32
340726792	401	PREDICTED: aminoacylase-1-like [Bombus t	0.964	0.274	0.576	1e-31
350421698	401	PREDICTED: aminoacylase-1-like [Bombus i	0.964	0.274	0.567	2e-31
326927775	392	PREDICTED: aminoacylase-1-like, partial	0.973	0.283	0.531	2e-31
363738588	413	PREDICTED: aminoacylase-1-like isoform 1	0.973	0.268	0.522	7e-31

>gi|91090496|ref|XP_969212.1| PREDICTED: similar to aminoacylase, putative [Tribolium castaneum] gi|270013867|gb|EFA10315.1| hypothetical protein TcasGA2_TC012531 [Tribolium castaneum]

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 72/112 (64%), Positives = 85/112 (75%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEEIGG  GM  FV T  FK +NVG ALDEG+ASP E FA+FNGER IW + IHCPG PG
Sbjct: 150 DEEIGGEDGMRKFVHTKEFKDLNVGFALDEGMASPNEEFAVFNGERCIWHLHIHCPGQPG 209

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITMLS 114
           HGSLL +NTA EKV Y++NKF   R +EK KLK N + TIGDVTT+N+T ++
Sbjct: 210 HGSLLLDNTAGEKVTYLLNKFFEFRRQEKKKLKDNPSRTIGDVTTVNLTQMT 261

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357630813|gb|EHJ78690.1| hypothetical protein KGM_00092 [Danaus plexippus]

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/111 (63%), Positives = 87/111 (78%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEEIGG  GM +FV TD+FK +NVG ALDEG+A+P E F +FNGER IWQ+ + C G PG
Sbjct: 144 DEEIGGHDGMKIFVHTDSFKALNVGFALDEGMANPDEEFIVFNGERNIWQIHVICTGQPG 203

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           HGSLL  NTA EK+ YI+NKF+ LR+E+K  L++N  LTIGDVTTIN+T +
Sbjct: 204 HGSLLIPNTAGEKMRYIINKFMDLRDEQKKILESNPKLTIGDVTTINLTQV 254

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|114052174|ref|NP_001040228.1| aminoacylase [Bombyx mori] gi|87248447|gb|ABD36276.1| aminoacylase [Bombyx mori]

 Score =  144 bits (364), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 67/112 (59%), Positives = 82/112 (73%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEEIGG  GM  FV TD FK MNVG ALDEG+ASP + + +FNGER IW +KI CPG  G
Sbjct: 148 DEEIGGDTGMGKFVQTDDFKNMNVGFALDEGVASPNDDYLVFNGERIIWHVKITCPGKSG 207

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITMLS 114
           HGSLL  +   EK+ YI++KF+ LR+E   KL  N  LTIGDVT++N+TM+S
Sbjct: 208 HGSLLLPDNCGEKLRYIIDKFMDLRQESVKKLADNPQLTIGDVTSVNLTMIS 259

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|432857165|ref|XP_004068561.1| PREDICTED: aminoacylase-1A-like [Oryzias latipes]

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 62/111 (55%), Positives = 83/111 (74%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG +GM  FVT   F+K+N+G ALDEG+A+P E F +F GER  W + IHCPG+PG
Sbjct: 157 DEEVGGHKGMETFVTQPEFQKLNIGFALDEGLANPGEAFTVFYGERNPWWITIHCPGSPG 216

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           HGS   ENTAAEK+  ++N FL  RE+EK +L  ++  T+GDVTT+N+TM+
Sbjct: 217 HGSRFVENTAAEKLRQVINSFLDFREKEKQRLNTSECFTLGDVTTVNMTMV 267

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410919749|ref|XP_003973346.1| PREDICTED: aminoacylase-1A-like [Takifugu rubripes]

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG +GM  FV    F K+N+G ALDEG+A+P E F +F GER  W + IHCPG+PG
Sbjct: 157 DEEVGGQKGMETFVKHPEFNKLNIGFALDEGLANPGEAFTVFYGERNPWWITIHCPGSPG 216

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           HGS   ENTAAEK++ IMN FL  RE+EK +L  ++ LT+GDVTT+N+TML
Sbjct: 217 HGSRFVENTAAEKLHQIMNTFLGFREKEKQRLNTSECLTLGDVTTVNLTML 267

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348534238|ref|XP_003454610.1| PREDICTED: aminoacylase-1A-like [Oreochromis niloticus]

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 84/111 (75%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG +GM  FV    F K+N+G ALDEG+A+PT+ F +F GER  W + +HCPG+PG
Sbjct: 157 DEEVGGYKGMETFVKQPEFHKLNIGFALDEGLANPTDAFTVFYGERNPWWITVHCPGSPG 216

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           HGS   ENTAAEK+ ++MN FL  RE+EK++L  ++  T+GDVTT+N+TM+
Sbjct: 217 HGSRFVENTAAEKLRHVMNSFLDFREKEKHRLNTSECFTLGDVTTVNMTMV 267

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|340726792|ref|XP_003401737.1| PREDICTED: aminoacylase-1-like [Bombus terrestris]

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEEIGG  GM  FV T  FK++N+G +LDEG+ASP E F +F GER IW +++ C GTPG
Sbjct: 147 DEEIGGELGMKDFVRTKDFKELNIGFSLDEGVASPEEYFYMFYGERAIWHVEVECKGTPG 206

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           HGS+LH+NTA EK+  I+++F+  R +EK KLK  K + IGDVTTIN+T L
Sbjct: 207 HGSILHDNTAGEKIRVIIDRFMDYRAQEKEKLKDPK-VQIGDVTTINLTQL 256

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350421698|ref|XP_003492928.1| PREDICTED: aminoacylase-1-like [Bombus impatiens]

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/111 (56%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEEIGG  GM  FV T  FK++N+G +LDEG+ASP E F +F GER IW +++ C GTPG
Sbjct: 147 DEEIGGDLGMKDFVRTKDFKELNIGFSLDEGVASPEEYFYMFYGERAIWHVEVECKGTPG 206

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           HGS+LH+NTA EK+  I+++F+  R +EK KLK +K + +GDVTTIN+T L
Sbjct: 207 HGSILHDNTAGEKIRIIIDRFMDYRVQEKEKLKDSK-VRLGDVTTINLTQL 256

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326927775|ref|XP_003210064.1| PREDICTED: aminoacylase-1-like, partial [Meleagris gallopavo]

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/111 (53%), Positives = 86/111 (77%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG +GM +F+    FK +NVG ALDEG+ASP++ +++F GE++ W +K+ C G+PG
Sbjct: 130 DEEVGGHKGMVMFLQRPEFKALNVGFALDEGLASPSDTYSVFYGEKSPWWIKVKCTGSPG 189

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           HGS    NTAAEK++ ++  FLA RE EK +LK+N +LT+GDVT++N+TML
Sbjct: 190 HGSRFITNTAAEKLHKVITSFLAFRESEKQRLKSNTSLTLGDVTSLNLTML 240

Source: Meleagris gallopavo

Species: Meleagris gallopavo

Genus: Meleagris

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|363738588|ref|XP_003642033.1| PREDICTED: aminoacylase-1-like isoform 1 [Gallus gallus]

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/111 (52%), Positives = 85/111 (76%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG +GM +F+    FK +NVG ALDEG+ASP++ +++F GE++ W +K+ C G+PG
Sbjct: 151 DEEVGGHKGMVMFLQRPEFKALNVGFALDEGLASPSDTYSVFYGEKSPWWIKVKCTGSPG 210

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           HGS    NTAAEK++ ++  FL  RE EK +LK+N +LT+GDVT++N+TML
Sbjct: 211 HGSRFITNTAAEKLHKVITSFLGFRESEKQRLKSNTSLTLGDVTSLNMTML 261

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
ZFIN|ZDB-GENE-040426-755	420	acy1 "aminoacylase 1" [Danio r	0.973	0.264	0.477	4.6e-25
FB|FBgn0039049	413	CG6726 [Drosophila melanogaste	0.973	0.268	0.468	4.3e-23
FB|FBgn0039050	402	CG17110 [Drosophila melanogast	0.982	0.278	0.464	4.5e-23
FB|FBgn0037818	401	CG6465 [Drosophila melanogaste	0.973	0.276	0.486	1.3e-22
FB|FBgn0039053	401	CG6738 [Drosophila melanogaste	0.982	0.279	0.482	1.7e-22
FB|FBgn0039052	401	CG6733 [Drosophila melanogaste	0.982	0.279	0.473	6.7e-22
FB|FBgn0039051	400	CG17109 [Drosophila melanogast	0.982	0.28	0.455	5.6e-21
UNIPROTKB|P37111	407	ACY1 "Aminoacylase-1" [Sus scr	0.964	0.270	0.423	5.3e-19
WB|WBGene00007507	399	C10C5.3 [Caenorhabditis elegan	0.982	0.280	0.419	8.2e-19
WB|WBGene00007509	397	C10C5.5 [Caenorhabditis elegan	0.982	0.282	0.410	1.3e-18

ZFIN|ZDB-GENE-040426-755 acy1 "aminoacylase 1" [Danio rerio (taxid:7955)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 53/111 (47%), Positives = 71/111 (63%)

Query:     3 DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
             DEE+GG +GM  FV    F+K+N+G ALDEG+A+PT  + +F GER  W + + CPG+PG
Sbjct:   158 DEEVGGHKGMETFVKHPEFQKLNMGFALDEGLANPTNAYTVFYGERNPWWITVRCPGSPG 217

Query:    63 HGSLLHENTAAEKVNYIMNKFXXXXXXXXXXXXXXXXXTIGDVTTINITML 113
             HGS   ENTAAEK+  ++N F                 T+GDVTTIN+TM+
Sbjct:   218 HGSRFVENTAAEKLRRVINSFLEFREKEKQRLNTSECFTLGDVTTINMTMV 268

GO:0005737 "cytoplasm" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0004046 "aminoacylase activity" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

FB|FBgn0039049 CG6726 [Drosophila melanogaster (taxid:7227)]

 Score = 268 (99.4 bits), Expect = 4.3e-23, P = 4.3e-23
 Identities = 52/111 (46%), Positives = 67/111 (60%)

Query:     3 DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
             DEE+GG  GM   V +D FKK+NVG + DEGI+S  E +AL+  ERT+W ++    GT G
Sbjct:   158 DEEVGGHLGMRELVKSDYFKKLNVGFSFDEGISSADETYALYYAERTLWHLRFKISGTAG 217

Query:    63 HGSLLHENTAAEKVNYIMNKFXXXXXXXXXXXXXXXXXTIGDVTTINITML 113
             HGSLL  NTA EK+NY++ K                   IGDVTT+N+T L
Sbjct:   218 HGSLLLPNTAGEKLNYVVGKMMEFRKSQVQKLADDSSLEIGDVTTVNLTQL 268

GO:0004046 "aminoacylase activity" evidence=IEA;NAS

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

FB|FBgn0039050 CG17110 [Drosophila melanogaster (taxid:7227)]

 Score = 267 (99.0 bits), Expect = 4.5e-23, P = 4.5e-23
 Identities = 52/112 (46%), Positives = 69/112 (61%)

Query:     3 DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
             DEE GG  GM+ FV  D FK MNVG +LDEGIAS  + + +F  ERT+WQ++    GT G
Sbjct:   148 DEETGGHMGMAEFVKGDYFKAMNVGFSLDEGIASEDDTYPVFYAERTLWQLRFKFSGTSG 207

Query:    63 HGSLLHENTAAEKVNYIMNKFXXXXXXXXXXXXXXXXXTIGDVTTINITMLS 114
             HGSLLH++TA EK +++M+K                    GDVTT+N+T L+
Sbjct:   208 HGSLLHKSTAGEKFHFVMDKLMKFRETQVKLLAEDSSLQSGDVTTLNLTQLN 259

GO:0004046 "aminoacylase activity" evidence=IEA;NAS

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

FB|FBgn0037818 CG6465 [Drosophila melanogaster (taxid:7227)]

 Score = 263 (97.6 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 54/111 (48%), Positives = 67/111 (60%)

Query:     3 DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
             DEE+GG  GM  FV T+ F+ +NVG A+DEG+ASP E   LF  ER +W++  +  GT G
Sbjct:   146 DEEMGGRYGMRPFVPTEDFRALNVGFAMDEGLASPDEQLPLFYAERAVWRVYFNISGTAG 205

Query:    63 HGSLLHENTAAEKVNYIMNKFXXXXXXXXXXXXXXXXXTIGDVTTINITML 113
             HGSLL  NTA EK+NYI+ K                   IGDVTTIN+T L
Sbjct:   206 HGSLLLPNTAGEKLNYIVGKMMEFRRSQVQRLQNNPELVIGDVTTINLTKL 256

GO:0004046 "aminoacylase activity" evidence=ISS

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

FB|FBgn0039053 CG6738 [Drosophila melanogaster (taxid:7227)]

 Score = 262 (97.3 bits), Expect = 1.7e-22, P = 1.7e-22
 Identities = 54/112 (48%), Positives = 69/112 (61%)

Query:     3 DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
             DEEIGG  GM+ FV TD +K+MNVG +LDEG  S ++V  LF  ER  W +K+   GT G
Sbjct:   146 DEEIGGIHGMAAFVETDFYKQMNVGFSLDEGGTSASDVHHLFYAERIRWILKLKVAGTAG 205

Query:    63 HGSLLHENTAAEKVNYIMNKFXXXXXXXXXXXXXXXXXTIGDVTTINITMLS 114
             HGSLL  +TA  K+NY++NK                  +IGDVTT+N+T LS
Sbjct:   206 HGSLLLPDTAGVKLNYVLNKLTEFRESQIQRLKNDKSLSIGDVTTVNLTQLS 257

GO:0004046 "aminoacylase activity" evidence=IEA;NAS

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

FB|FBgn0039052 CG6733 [Drosophila melanogaster (taxid:7227)]

 Score = 257 (95.5 bits), Expect = 6.7e-22, P = 6.7e-22
 Identities = 53/112 (47%), Positives = 66/112 (58%)

Query:     3 DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
             DEE GG  GM+ FV TD +KKMN G +LDEG  S ++V  LF  ER  W +K+   GT G
Sbjct:   146 DEETGGHLGMAEFVKTDYYKKMNAGFSLDEGATSESDVHHLFYAERLRWGLKLKVSGTSG 205

Query:    63 HGSLLHENTAAEKVNYIMNKFXXXXXXXXXXXXXXXXXTIGDVTTINITMLS 114
             HGSLL  NTA  K+NY++NK                  + GDVTT+N+T LS
Sbjct:   206 HGSLLLPNTAGVKLNYLVNKLTEFRTSQVENLARDSSLSKGDVTTVNLTQLS 257

GO:0004046 "aminoacylase activity" evidence=IEA;NAS

GO:0005737 "cytoplasm" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

FB|FBgn0039051 CG17109 [Drosophila melanogaster (taxid:7227)]

 Score = 249 (92.7 bits), Expect = 5.6e-21, P = 5.6e-21
 Identities = 51/112 (45%), Positives = 66/112 (58%)

Query:     3 DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
             DEEIGG  GM  FV T+ +  MNVG +LDEG  S  ++F +F  ER  W +K++  GT G
Sbjct:   145 DEEIGGELGMQEFVKTEYYSNMNVGFSLDEGGTSEIDLFYVFYAERMRWGLKLNFSGTSG 204

Query:    63 HGSLLHENTAAEKVNYIMNKFXXXXXXXXXXXXXXXXXTIGDVTTINITMLS 114
             HGS+L  +TA  K+NY++NK                   IGDVTTIN+T LS
Sbjct:   205 HGSMLLPSTAGVKLNYVLNKLTEFRESQVQRLANDQTINIGDVTTINLTQLS 256

GO:0004046 "aminoacylase activity" evidence=IEA;NAS

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|P37111 ACY1 "Aminoacylase-1" [Sus scrofa (taxid:9823)]

 Score = 232 (86.7 bits), Expect = 5.3e-19, P = 5.3e-19
 Identities = 47/111 (42%), Positives = 65/111 (58%)

Query:     3 DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
             DEE+GG QGM LFV    F+ +  G ALDEG+ASPT+ F +F  ER+ W +++   G PG
Sbjct:   146 DEEVGGHQGMELFVKRPEFQALRAGFALDEGLASPTDAFTVFYSERSPWWLRVTSTGKPG 205

Query:    63 HGSLLHENTAAEKVNYIMNKFXXXXXXXXXXXXXXXXXTIGDVTTINITML 113
             HGS   E+TAAEK++ ++N                     G VT++N+TML
Sbjct:   206 HGSRFIEDTAAEKLHKVINSILAFREKEKQRLQSNQLKP-GAVTSVNLTML 255

GO:0005737 "cytoplasm" evidence=IEA

GO:0004046 "aminoacylase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

WB|WBGene00007507 C10C5.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 230 (86.0 bits), Expect = 8.2e-19, P = 8.2e-19
 Identities = 47/112 (41%), Positives = 63/112 (56%)

Query:     3 DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
             DEEI G  GM  F  TD FKK+N+G +LDEG+ S  +V+ +F  ER  W +K+  PG PG
Sbjct:   142 DEEIFGINGMKGFAKTDEFKKLNLGFSLDEGMPSDDDVYKVFYAERVAWWVKVTFPGNPG 201

Query:    63 HGSLLHENTAAEKVNYIMNKFXXXXXXXXXXXXXXXXXTIGDVTTINITMLS 114
             HGS   ENTA EK+   +                    TIGDVTT+N+ +++
Sbjct:   202 HGSQFMENTAMEKLERYLASARKFRDEQKALLESNPDLTIGDVTTLNVNIVN 253

GO:0006508 "proteolysis" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0004046 "aminoacylase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

WB|WBGene00007509 C10C5.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 228 (85.3 bits), Expect = 1.3e-18, P = 1.3e-18
 Identities = 46/112 (41%), Positives = 63/112 (56%)

Query:     3 DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
             DEEI G  GM  F  TD FKK+N+G +LDEG+ S  +V+ +F  ER  W +K+  PG PG
Sbjct:   142 DEEIFGINGMKGFAKTDEFKKLNLGFSLDEGMPSDDDVYKVFYAERVAWWVKVTFPGNPG 201

Query:    63 HGSLLHENTAAEKVNYIMNKFXXXXXXXXXXXXXXXXXTIGDVTTINITMLS 114
             HGS   ENTA EK+   +                    T+GDVTT+N+ +++
Sbjct:   202 HGSQFMENTAMEKLERFLASARKFRNEQKVVLESNPNLTLGDVTTLNVNIVN 253

GO:0006508 "proteolysis" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0004046 "aminoacylase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P37111	ACY1_PIG	3, ., 5, ., 1, ., 1, 4	0.5045	0.9649	0.2702	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	114
cd05646	391	cd05646, M20_AcylaseI_like, M20 Aminoacylase-I lik	1e-58
TIGR01880	400	TIGR01880, Ac-peptdase-euk, N-acyl-L-amino-acid am	6e-46
pfam01546	310	pfam01546, Peptidase_M20, Peptidase family M20/M25	6e-04
cd08659	365	cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylo	0.002
cd05675	426	cd05675, M20_yscS_like, M20 Peptidase, carboxypept	0.002

>gnl|CDD|193524 cd05646, M20_AcylaseI_like, M20 Aminoacylase-I like subfamily

 Score =  184 bits (470), Expect = 1e-58
 Identities = 65/112 (58%), Positives = 83/112 (74%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEEIGG  GM  FV T+ FKK+NVG ALDEG+ASPTE + +F GER+ W + I   GTPG
Sbjct: 138 DEEIGGHDGMEKFVKTEEFKKLNVGFALDEGLASPTEEYRVFYGERSPWWVVITASGTPG 197

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITMLS 114
           HGS L +NTA EK+  ++ KF+  REE+  +LK+N  LTIGDVT++N+TML 
Sbjct: 198 HGSKLLDNTAGEKLMKVIEKFMEFREEQFQRLKSNGKLTIGDVTSVNLTMLK 249

Peptidase M20 family, Aminoacylase-I like (AcyI-like; Acylase I; N-acyl-L-amino-acid amidohydrolase; EC 3.5.1.14) subfamily. Acylase I is involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate) and is considered as a potential target of antimicrobial agents. Porcine AcyI is also shown to deacetylate certain quorum-sensing N-acylhomoserine lactones, while the rat enzyme has been implicated in degradation of chemotactic peptides of commensal bacteria. Prokaryotic arginine synthesis usually involves the transfer of an acetyl group to glutamate by ornithine acetyltransferase in order to form ornithine. However, Escherichia coli acetylornithine deacetylase (acetylornithinase, ArgE) (EC 3.5.1.16) catalyzes the deacylation of N2-acetyl-L-ornithine to yield ornithine and acetate. Phylogenetic evidence suggests that the clustering of the arg genes in one continuous sequence pattern arose in an ancestor common to Enterobacteriaceae and Vibrionaceae, where ornithine acetyltransferase was lost and replaced by a deacylase. Length = 391

>gnl|CDD|233615 TIGR01880, Ac-peptdase-euk, N-acyl-L-amino-acid amidohydrolase

 Score =  152 bits (385), Expect = 6e-46
 Identities = 55/111 (49%), Positives = 72/111 (64%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEEIGG  GM  F  TD FK +N+G ALDEG+ASP +V+ +F  ER  W + +  PG PG
Sbjct: 145 DEEIGGHDGMEKFAKTDEFKALNLGFALDEGLASPDDVYRVFYAERVPWWVVVTAPGNPG 204

Query: 63  HGSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITML 113
           HGS L ENTA EK+   +      RE +   L++N +L IGDVT++N+T L
Sbjct: 205 HGSKLMENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAIGDVTSVNLTKL 255

This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids. Length = 400

>gnl|CDD|216562 pfam01546, Peptidase_M20, Peptidase family M20/M25/M40

 Score = 37.5 bits (87), Expect = 6e-04
 Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 5/110 (4%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE GG +G    +   A   ++    +   +  PT +     G R    + +   G  G
Sbjct: 69  DEEGGGFEGARALIEDGAIFGLHPDQGV---VGEPTGL-PGGTGIRGSLDLFLTVIGGAG 124

Query: 63  H-GSLLHENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINIT 111
           H GS  H   A       +   L L             + IG V     +
Sbjct: 125 HHGSPPHGGNAIALAAAALILLLQLIVSRGVDPLDPAVVGIGTVGGGGGS 174

This family includes a range of zinc metallopeptidases belonging to several families in the peptidase classification. Family M20 are Glutamate carboxypeptidases. Peptidase family M25 contains X-His dipeptidases. Length = 310

>gnl|CDD|193570 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like

 Score = 36.1 bits (84), Expect = 0.002
 Identities = 23/115 (20%), Positives = 40/115 (34%), Gaps = 18/115 (15%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE G   G    +      +     A+   +  PT    +    +   ++++   G   
Sbjct: 130 DEETGSL-GARALLERGYALR--PDAAI---VGEPTS-LDICIAHKGSLRLRVTATGKAA 182

Query: 63  HGSLLHENTAAEKVN--YIMNKFL-ALREEEKNKLKANKNLTIGDVTTINITMLS 114
           HGS          VN  Y + K + AL E        +  L  G   T+N+ ++ 
Sbjct: 183 HGSRPELG-----VNAIYALAKVIGALEELPFALPAEHPLL--GP-PTLNVGVIK 229

Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE) like family of enzymes catalyze analogous reactions and share a common activator, the metal ion (usually Co2+ or Zn2+). ArgE catalyzes a broad range of substrates, including N-acetylornithine, alpha-N-acetylmethionine and alpha-N-formylmethionine, while DapE catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelate (L,L-SDAP) to L,L-diaminopimelate and succinate. Proteins in this family are mostly bacterial and have been inferred by homology as being related to both, ArgE and DapE. This family also includes N-acetyl-L-citrulline deacetylase (ACDase; acetylcitrulline deacetylase), a unique, novel enzyme found in Xanthomonas campestris, a plant pathogen, in which N-acetyl-L-ornithine is the substrate for transcarbamoylation reaction, and the product is N-acetyl-L-citrulline. Thus, in the arginine biosynthesis pathway, ACDase subsequently catalyzes the hydrolysis of N-acetyl-L-citrulline to acetate and L-citrulline. Length = 365

>gnl|CDD|193550 cd05675, M20_yscS_like, M20 Peptidase, carboxypeptidase yscS-like

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 10/82 (12%)

Query: 3   DEEIGGSQGMSLFVTT--DAFKKMNVGCALDEG------IASPTEVFALFNGERTIWQMK 54
           DEE GG  G    V    D F       A++EG            ++ +   E+    ++
Sbjct: 133 DEEAGGEYGAKWLVENHPDLFD--GAEFAINEGGGGSLDDGGKPRLYPIQTAEKGYAWLR 190

Query: 55  IHCPGTPGHGSLLHENTAAEKV 76
           +   G  GHGS+   + A  ++
Sbjct: 191 LTATGPGGHGSMPRPDNAIYRL 212

Peptidase M20 family, yscS (GlyX-carboxypeptidase, CPS1, carboxypeptidase S, carboxypeptidase a, carboxypeptidase yscS, glycine carboxypeptidase)-like subfamily. This group contains proteins that have been uncharacterized to date with similarity to vacuolar proteins involved in nitrogen metabolism which are essential for use of certain peptides that are sole nitrogen sources. YscS releases a C-terminal amino acid from a peptide that has glycine as the penultimate residue. It is synthesized as one polypeptide chain precursor which yields two active precursor molecules after carbohydrate modification in the secretory pathway. The proteolytically unprocessed forms are associated with the membrane, whereas the mature forms of the enzyme are soluble. Enzymes in this subfamily may also cleave intracellularly generated peptides in order to recycle amino acids for protein synthesis. Length = 426

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	114
KOG2275|consensus	420		99.93
TIGR01880	400	Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase	99.75
PRK08737	364	acetylornithine deacetylase; Provisional	99.55
PRK13013	427	succinyl-diaminopimelate desuccinylase; Reviewed	99.54
PRK09133	472	hypothetical protein; Provisional	99.51
PRK06915	422	acetylornithine deacetylase; Validated	99.51
PRK05111	383	acetylornithine deacetylase; Provisional	99.5
TIGR01910	375	DapE-ArgE acetylornithine deacetylase or succinyl-	99.49
PRK04443	348	acetyl-lysine deacetylase; Provisional	99.49
PRK08588	377	succinyl-diaminopimelate desuccinylase; Reviewed	99.48
PRK07522	385	acetylornithine deacetylase; Provisional	99.47
TIGR01892	364	AcOrn-deacetyl acetylornithine deacetylase (ArgE).	99.44
PRK00466	346	acetyl-lysine deacetylase; Validated	99.44
PRK13009	375	succinyl-diaminopimelate desuccinylase; Reviewed	99.42
PRK07906	426	hypothetical protein; Provisional	99.42
TIGR03320	395	ygeY M20/DapE family protein YgeY. Members of this	99.41
PRK08652	347	acetylornithine deacetylase; Provisional	99.41
PRK06446	436	hypothetical protein; Provisional	99.4
TIGR01900	373	dapE-gram_pos succinyl-diaminopimelate desuccinyla	99.39
TIGR03526	395	selenium_YgeY putative selenium metabolism hydrola	99.38
TIGR01246	370	dapE_proteo succinyl-diaminopimelate desuccinylase	99.38
PRK13983	400	diaminopimelate aminotransferase; Provisional	99.38
PRK08651	394	succinyl-diaminopimelate desuccinylase; Reviewed	99.36
PRK13007	352	succinyl-diaminopimelate desuccinylase; Reviewed	99.36
PRK06837	427	acetylornithine deacetylase; Provisional	99.35
PRK08262	486	hypothetical protein; Provisional	99.35
PRK09290	413	allantoate amidohydrolase; Reviewed	99.33
TIGR01891	363	amidohydrolases amidohydrolase. This model represe	99.33
PRK13004	399	peptidase; Reviewed	99.33
PRK07473	376	carboxypeptidase; Provisional	99.32
PRK08201	456	hypothetical protein; Provisional	99.27
TIGR01902	336	dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d	99.25
PRK12892	412	allantoate amidohydrolase; Reviewed	99.24
PLN02280	478	IAA-amino acid hydrolase	99.22
PRK12893	412	allantoate amidohydrolase; Reviewed	99.22
PRK12890	414	allantoate amidohydrolase; Reviewed	99.2
PRK07338	402	hypothetical protein; Provisional	99.19
PRK07907	449	hypothetical protein; Provisional	99.17
PRK06133	410	glutamate carboxypeptidase; Reviewed	99.13
PLN02693	437	IAA-amino acid hydrolase	99.13
PRK09104	464	hypothetical protein; Validated	99.13
TIGR01879	401	hydantase amidase, hydantoinase/carbamoylase famil	99.11
PRK13381	404	peptidase T; Provisional	99.1
PRK07318	466	dipeptidase PepV; Reviewed	99.07
TIGR01887	447	dipeptidaselike dipeptidase, putative. This model	99.05
PRK07079	469	hypothetical protein; Provisional	99.05
TIGR01886	466	dipeptidase dipeptidase PepV. This model represent	99.03
COG0624	409	ArgE Acetylornithine deacetylase/Succinyl-diaminop	98.99
PRK12891	414	allantoate amidohydrolase; Reviewed	98.99
TIGR01883	361	PepT-like peptidase T-like protein. This model rep	98.97
PRK08596	421	acetylornithine deacetylase; Validated	98.96
PRK07205	444	hypothetical protein; Provisional	98.95
PRK06156	520	hypothetical protein; Provisional	98.89
PF07687	111	M20_dimer: Peptidase dimerisation domain This fami	98.82
PRK05469	408	peptidase T; Provisional	98.82
TIGR01882	410	peptidase-T peptidase T. This model represents a t	98.76
TIGR01893	477	aa-his-dipept aminoacyl-histidine dipeptidase.	98.63
PRK15026	485	aminoacyl-histidine dipeptidase; Provisional	98.59
COG1473	392	AbgB Metal-dependent amidase/aminoacylase/carboxyp	98.34
TIGR03176	406	AllC allantoate amidohydrolase. This enzyme cataly	98.29
PRK13799	591	unknown domain/N-carbamoyl-L-amino acid hydrolase	98.1
PRK08554	438	peptidase; Reviewed	97.93
PRK13590	591	putative bifunctional OHCU decarboxylase/allantoat	97.88
COG2195	414	PepD Di- and tripeptidases [Amino acid transport a	92.93
COG4187	553	RocB Arginine degradation protein (predicted deacy	89.87
PF01546	189	Peptidase_M20: Peptidase family M20/M25/M40 This f	88.53
KOG2276|consensus	473		83.25

>KOG2275|consensus

Probab=99.93  E-value=6.3e-26  Score=180.57  Aligned_cols=114  Identities=40%  Similarity=0.677  Sum_probs=108.6

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCCCCCHHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIM   80 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~~~nAi~~~~~~i   80 (114)
                      ++|||+||..|++-+++..+|++++.++++|||+..+...+.++++|||.||++|+++|++||||.|++++|++++.++|
T Consensus       160 vpDEEi~G~~Gm~~fa~~~~~~~l~~~filDEG~~se~d~~~vfyaEkg~w~~~v~~~G~~GHss~~~~nTa~~~l~klv  239 (420)
T KOG2275|consen  160 VPDEEIGGHIGMKEFAKTEEFKKLNLGFILDEGGATENDFATVFYAEKGPWWLKVTANGTPGHSSYPPPNTAIEKLEKLV  239 (420)
T ss_pred             cCchhccCcchHHHHhhhhhhcccceeEEecCCCCCcccceeEEEEeeceeEEEEEecCCCCCCCCCCCccHHHHHHHHH
Confidence            58999999999999999778999999999999988888888899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccceeeeeeeccC
Q psy14393         81 NKFLALREEEKNKLKANKNLTIGDVTTINITMLS  114 (114)
Q Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~  114 (114)
                      +.+.++|++|.+.+.+++.++.+++|++|++.+|
T Consensus       240 ~~~~~fr~~q~~~l~~~p~~~~~~vtT~Nv~~i~  273 (420)
T KOG2275|consen  240 ESLEEFREKQVDLLASGPKLALGDVTTINVGIIN  273 (420)
T ss_pred             HHHHHhHHHHHHHhhcCCceeccceeEEeeeeee
Confidence            9999999999999999999999999999999875

>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase

Probab=99.75  E-value=8.5e-18  Score=132.98  Aligned_cols=113  Identities=49%  Similarity=0.813  Sum_probs=87.4

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCCCCCHHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIM   80 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~~~nAi~~~~~~i   80 (114)
                      ++|||.|+..|+++|++++.++..+.++++|+|.++|+....+++++||.+|++|+++|+++|||.|...|||..|++++
T Consensus       143 ~~dEE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~i~~~~kG~~~~~l~v~G~~~Hs~~~~~~nai~~l~~~i  222 (400)
T TIGR01880       143 VPDEEIGGHDGMEKFAKTDEFKALNLGFALDEGLASPDDVYRVFYAERVPWWVVVTAPGNPGHGSKLMENTAMEKLEKSV  222 (400)
T ss_pred             eCCcccCcHhHHHHHHHhhhccCCceEEEEcCCCcccccccceeEEeeEEEEEEEEEecCCCCCCCCCCCCHHHHHHHHH
Confidence            57999987679999998755655557899988877776556899999999999999999999999987789999999999


Q ss_pred             HHHHHHHHHHHHhhhhCCCCCccceeeeeeecc
Q psy14393         81 NKFLALREEEKNKLKANKNLTIGDVTTINITML  113 (114)
Q Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~  113 (114)
                      ..|.++...+.+.+...+....+..+++|+..+
T Consensus       223 ~~l~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i  255 (400)
T TIGR01880       223 ESIRRFRESQFQLLQSNPDLAIGDVTSVNLTKL  255 (400)
T ss_pred             HHHHHhhHHHHHHHhcCccccccccceeeccee
Confidence            999887655544333332223333466666544

This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.

>PRK08737 acetylornithine deacetylase; Provisional

Probab=99.55  E-value=2.7e-14  Score=112.72  Aligned_cols=79  Identities=20%  Similarity=0.218  Sum_probs=65.8

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC--CCCHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH--ENTAAEKVNY   78 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~--~~nAi~~~~~   78 (114)
                      ++|||+|+..|++++++.+ .+   ++++|   +++|+ ...++++|||.+|++|+++|+++|+|.|+  +.|||..+++
T Consensus       126 ~~dEE~g~~~g~~~~~~~~-~~---~~~~i---v~Ept-~~~~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~  197 (364)
T PRK08737        126 SSDEEANDPRCVAAFLARG-IP---YEAVL---VAEPT-MSEAVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMR  197 (364)
T ss_pred             EcccccCchhhHHHHHHhC-CC---CCEEE---EcCCC-CceeEEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHH
Confidence            5899998767999998853 22   67787   46786 46788999999999999999999999984  5999999999


Q ss_pred             HHHHHHHHH
Q psy14393         79 IMNKFLALR   87 (114)
Q Consensus        79 ~i~~l~~~~   87 (114)
                      +|.++.++.
T Consensus       198 ~l~~~~~~~  206 (364)
T PRK08737        198 WGGQALDHV  206 (364)
T ss_pred             HHHHHHHHH
Confidence            998876553

>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed

Probab=99.54  E-value=3.5e-14  Score=112.94  Aligned_cols=84  Identities=20%  Similarity=0.341  Sum_probs=68.7

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||+|+..|..+|++++.++..+++++|.   ++|+....+.+++||.+|++++++|+++|||.|+ +.|||..|+++
T Consensus       154 ~~dEE~g~~~g~~~l~~~~~~~~~~~d~~i~---~ep~~~~~i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~  230 (427)
T PRK13013        154 TADEESGGFGGVAYLAEQGRFSPDRVQHVII---PEPLNKDRICLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAV  230 (427)
T ss_pred             EeccccCChhHHHHHHhcCCccccCCCEEEE---ecCCCCCceEEeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHH
Confidence            4799998766888999876665333677773   5676434688999999999999999999999996 59999999999


Q ss_pred             HHHHHHHH
Q psy14393         80 MNKFLALR   87 (114)
Q Consensus        80 i~~l~~~~   87 (114)
                      |.+|+++.
T Consensus       231 l~~l~~~~  238 (427)
T PRK13013        231 LAEIEERL  238 (427)
T ss_pred             HHHHHHHh
Confidence            99997653

>PRK09133 hypothetical protein; Provisional

Probab=99.51  E-value=4.3e-14  Score=114.43  Aligned_cols=84  Identities=20%  Similarity=0.311  Sum_probs=67.6

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcc-------cCCCcceeeecccceEEEEEEEeccCCCcCCCCCCCHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIA-------SPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAA   73 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~-------~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~~~nAi   73 (114)
                      ++|||++|..|+++|+++.. ...+++++|+||+.       +| +...+++++||.+|++|+++|+++|||.|...|||
T Consensus       172 ~~dEE~~g~~G~~~l~~~~~-~~~~~~~~i~e~~~~~~~~~gep-t~~~i~~g~kG~~~~~i~v~G~~~Hss~p~~~nAi  249 (472)
T PRK09133        172 TGDEEGTPMNGVAWLAENHR-DLIDAEFALNEGGGGTLDEDGKP-VLLTVQAGEKTYADFRLEVTNPGGHSSRPTKDNAI  249 (472)
T ss_pred             ECccccCccchHHHHHHHHh-hccCeEEEEECCCccccCCCCCc-eEEEeeeecceeEEEEEEEecCCCCCCCCCCCChH
Confidence            57999555689999997521 11236788877653       44 35568899999999999999999999999889999


Q ss_pred             HHHHHHHHHHHHH
Q psy14393         74 EKVNYIMNKFLAL   86 (114)
Q Consensus        74 ~~~~~~i~~l~~~   86 (114)
                      ..|+++|.+|.++
T Consensus       250 ~~l~~~l~~l~~~  262 (472)
T PRK09133        250 YRLAAALSRLAAY  262 (472)
T ss_pred             HHHHHHHHHHhhC
Confidence            9999999999764

>PRK06915 acetylornithine deacetylase; Validated

Probab=99.51  E-value=9.3e-14  Score=110.63  Aligned_cols=81  Identities=23%  Similarity=0.422  Sum_probs=67.4

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||+|| .|+.+++..+ ++   +|+++.   ++|+ ...+++++||.+|++|+++|+++|+|.|+ +.|||..++++
T Consensus       165 ~~dEE~g~-~G~~~~~~~~-~~---~d~~i~---~ep~-~~~i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~~~~~  235 (422)
T PRK06915        165 VIEEESGG-AGTLAAILRG-YK---ADGAII---PEPT-NMKFFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEKSMFV  235 (422)
T ss_pred             ecccccCC-cchHHHHhcC-cC---CCEEEE---CCCC-CccceeecccEEEEEEEEEeeccccCCCCcCcCHHHHHHHH
Confidence            47999986 5988887753 33   678884   5675 45788999999999999999999999996 59999999999


Q ss_pred             HHHHHHHHHHH
Q psy14393         80 MNKFLALREEE   90 (114)
Q Consensus        80 i~~l~~~~~~~   90 (114)
                      +..|.+++..+
T Consensus       236 ~~~l~~l~~~~  246 (422)
T PRK06915        236 IDHLRKLEEKR  246 (422)
T ss_pred             HHHHHHHHHHh
Confidence            99998887543

>PRK05111 acetylornithine deacetylase; Provisional

Probab=99.50  E-value=1.3e-13  Score=108.14  Aligned_cols=82  Identities=27%  Similarity=0.385  Sum_probs=67.7

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.|+ .|++++++++.++   ++++|   +++|+ ...+++++||.+|++|+++|+++|||.|. +.|||..++++
T Consensus       140 ~~~EE~g~-~G~~~~~~~~~~~---~d~~i---~~ep~-~~~~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~  211 (383)
T PRK05111        140 TADEETSM-AGARAFAEATAIR---PDCAI---IGEPT-SLKPVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDV  211 (383)
T ss_pred             EeccccCc-ccHHHHHhcCCCC---CCEEE---EcCCC-CCceeecccceEEEEEEEEeechhccCCccCcCHHHHHHHH
Confidence            47999986 6999999865444   46777   35675 35567899999999999999999999996 59999999999


Q ss_pred             HHHHHHHHHHH
Q psy14393         80 MNKFLALREEE   90 (114)
Q Consensus        80 i~~l~~~~~~~   90 (114)
                      +.++.+++...
T Consensus       212 i~~l~~~~~~~  222 (383)
T PRK05111        212 IGELLQLRDEL  222 (383)
T ss_pred             HHHHHHHHHHH
Confidence            99998876543

>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase

Probab=99.49  E-value=1.2e-13  Score=108.29  Aligned_cols=84  Identities=21%  Similarity=0.289  Sum_probs=68.9

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.|+ .|++++++++.+++  ++++|.   ++|+....+.+++||.++++|+++|+++|||.|. +.|||..++++
T Consensus       136 ~~~EE~g~-~G~~~~~~~~~~~~--~d~~i~---~~~~~~~~v~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~  209 (375)
T TIGR01910       136 VVDEESGE-AGTLYLLQRGYFKD--ADGVLI---PEPSGGDNIVIGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKL  209 (375)
T ss_pred             EcCcccCc-hhHHHHHHcCCCCC--CCEEEE---CCCCCCCceEEEecceEEEEEEEeeeecccCCCCcchhHHHHHHHH
Confidence            47999985 69999998755543  567763   4554346788999999999999999999999996 49999999999


Q ss_pred             HHHHHHHHHHH
Q psy14393         80 MNKFLALREEE   90 (114)
Q Consensus        80 i~~l~~~~~~~   90 (114)
                      |.+|.++....
T Consensus       210 l~~l~~~~~~~  220 (375)
T TIGR01910       210 ITELNELEEHI  220 (375)
T ss_pred             HHHHHHHHHHh
Confidence            99998876543

This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.

>PRK04443 acetyl-lysine deacetylase; Provisional

Probab=99.49  E-value=8.2e-14  Score=108.72  Aligned_cols=79  Identities=19%  Similarity=0.085  Sum_probs=63.4

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCCCCCHHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIM   80 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~~~nAi~~~~~~i   80 (114)
                      ++|||.|+. |...++.+ .++   ++++|   +++|+....+++++||.+|++++++|+++|||.| +.|||..|++++
T Consensus       119 ~~dEE~g~~-~~~~~l~~-~~~---~d~~i---v~Ept~~~~i~~~~kG~~~~~l~~~G~~~Hss~~-g~NAi~~~~~~l  189 (348)
T PRK04443        119 AVEEEAPSS-GGARLVAD-RER---PDAVI---IGEPSGWDGITLGYKGRLLVTYVATSESFHSAGP-EPNAAEDAIEWW  189 (348)
T ss_pred             EcccccCCh-hHHHHHHh-ccC---CCEEE---EeCCCCccceeeecccEEEEEEEEEeCCCccCCC-CCCHHHHHHHHH
Confidence            579999874 55554443 232   68887   4677644468999999999999999999999988 799999999999


Q ss_pred             HHHHHHHH
Q psy14393         81 NKFLALRE   88 (114)
Q Consensus        81 ~~l~~~~~   88 (114)
                      .+|.++..
T Consensus       190 ~~l~~~~~  197 (348)
T PRK04443        190 LAVEAWFE  197 (348)
T ss_pred             HHHHHHHh
Confidence            99987654

>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed

Probab=99.48  E-value=1e-13  Score=108.66  Aligned_cols=81  Identities=14%  Similarity=0.191  Sum_probs=66.9

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.|+ .|+++|++++.+++  +++++.   ++|+ ...+.+++||.+|++|+++|+++|||.|. +.|||..++++
T Consensus       131 ~~dEE~g~-~G~~~~~~~~~~~~--~d~~i~---~ep~-~~~i~~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~  203 (377)
T PRK08588        131 TAGEEVGE-LGAKQLTEKGYADD--LDALII---GEPS-GHGIVYAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEF  203 (377)
T ss_pred             EcccccCc-hhHHHHHhcCccCC--CCEEEE---ecCC-CceeEEEEEEEEEEEEEEEeechhccCCccccCHHHHHHHH
Confidence            47999875 79999998765544  566663   5564 45688999999999999999999999996 59999999999


Q ss_pred             HHHHHHHHH
Q psy14393         80 MNKFLALRE   88 (114)
Q Consensus        80 i~~l~~~~~   88 (114)
                      +.++.++..
T Consensus       204 l~~l~~~~~  212 (377)
T PRK08588        204 YNEQKEYFD  212 (377)
T ss_pred             HHHHHHHhh
Confidence            999977543

>PRK07522 acetylornithine deacetylase; Provisional

Probab=99.47  E-value=3.4e-13  Score=105.78  Aligned_cols=84  Identities=18%  Similarity=0.235  Sum_probs=66.8

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.|+ .|+++|++........++++|.   ++|+ ...+++++||.+|++|+++|+++|+|.|. +.||+..++++
T Consensus       133 ~~dEE~g~-~G~~~l~~~~~~~~~~~d~~i~---~ep~-~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~  207 (385)
T PRK07522        133 SYDEEVGC-LGVPSMIARLPERGVKPAGCIV---GEPT-SMRPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARL  207 (385)
T ss_pred             EeccccCC-ccHHHHHHHhhhcCCCCCEEEE---ccCC-CCeeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHH
Confidence            47999975 7999999742111123678873   5665 46788999999999999999999999996 59999999999


Q ss_pred             HHHHHHHHHH
Q psy14393         80 MNKFLALREE   89 (114)
Q Consensus        80 i~~l~~~~~~   89 (114)
                      +..|+++...
T Consensus       208 i~~l~~~~~~  217 (385)
T PRK07522        208 IAHLRDLADR  217 (385)
T ss_pred             HHHHHHHHHH
Confidence            9999876543

>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE)

Probab=99.44  E-value=6.2e-13  Score=103.32  Aligned_cols=81  Identities=20%  Similarity=0.306  Sum_probs=66.5

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.|+ .|+++++++..++   +++++   +++|+ ...+..++||.+|++|+++|+++|+|.|. +.|||..++++
T Consensus       127 ~~~EE~g~-~G~~~~~~~~~~~---~d~~i---~~ep~-~~~~~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~  198 (364)
T TIGR01892       127 TADEEVGC-TGAPKMIEAGAGR---PRHAI---IGEPT-RLIPVRAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRF  198 (364)
T ss_pred             EeccccCC-cCHHHHHHhcCCC---CCEEE---ECCCC-CceeEEeeceEEEEEEEEEcccccccCCccCcCHHHHHHHH
Confidence            47999975 7999999864333   57777   35675 34567899999999999999999999996 49999999999


Q ss_pred             HHHHHHHHHH
Q psy14393         80 MNKFLALREE   89 (114)
Q Consensus        80 i~~l~~~~~~   89 (114)
                      +.+|.++...
T Consensus       199 i~~l~~~~~~  208 (364)
T TIGR01892       199 LQRLVHLADT  208 (364)
T ss_pred             HHHHHHHHHH
Confidence            9999877543

This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.

>PRK00466 acetyl-lysine deacetylase; Validated

Probab=99.44  E-value=3.7e-13  Score=104.87  Aligned_cols=77  Identities=21%  Similarity=0.306  Sum_probs=63.9

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCCCCCHHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIM   80 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~~~nAi~~~~~~i   80 (114)
                      ++|||.|+ .|++++++++ ++   ++++|   +++|+....+.+++||.+|++|+++|+++|||.|. .|||..|++++
T Consensus       119 ~~dEE~g~-~G~~~l~~~~-~~---~d~~i---~~ep~~~~~i~~~~kG~~~~~i~v~G~~~Has~p~-~nAi~~~~~~l  189 (346)
T PRK00466        119 LADEESTS-IGAKELVSKG-FN---FKHII---VGEPSNGTDIVVEYRGSIQLDIMCEGTPEHSSSAK-SNLIVDISKKI  189 (346)
T ss_pred             EcCcccCC-ccHHHHHhcC-CC---CCEEE---EcCCCCCCceEEEeeEEEEEEEEEEeeccccCCCC-cCHHHHHHHHH
Confidence            58999875 6999999863 32   67777   36776545688999999999999999999999986 59999999999


Q ss_pred             HHHHHH
Q psy14393         81 NKFLAL   86 (114)
Q Consensus        81 ~~l~~~   86 (114)
                      .+|.++
T Consensus       190 ~~l~~~  195 (346)
T PRK00466        190 IEVYKQ  195 (346)
T ss_pred             HHHHhc
Confidence            988653

>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed

Probab=99.42  E-value=3e-13  Score=105.77  Aligned_cols=85  Identities=18%  Similarity=0.154  Sum_probs=65.2

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCc----ceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEV----FALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEK   75 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~----~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~   75 (114)
                      ++|||.++..|++.+++........++++|.   ++|+..    ..+.+++||.+|++++++|+++|+|.|. +.|||..
T Consensus       130 ~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~---~ep~~~~~~~~~i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~  206 (375)
T PRK13009        130 TSDEEGPAINGTVKVLEWLKARGEKIDYCIV---GEPTSTERLGDVIKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHL  206 (375)
T ss_pred             EeecccccccCHHHHHHHHHHcCcCCCEEEE---cCCCcccCCCCeEEEecceEEEEEEEEEecCcccCCCCcccCHHHH
Confidence            4799997767999988631111223678863   444421    2478999999999999999999999996 5999999


Q ss_pred             HHHHHHHHHHHHH
Q psy14393         76 VNYIMNKFLALRE   88 (114)
Q Consensus        76 ~~~~i~~l~~~~~   88 (114)
                      ++++|.+|..+..
T Consensus       207 ~~~~l~~l~~~~~  219 (375)
T PRK13009        207 AAPALAELAATEW  219 (375)
T ss_pred             HHHHHHHHHhhhc
Confidence            9999999977543

>PRK07906 hypothetical protein; Provisional

Probab=99.42  E-value=5.8e-13  Score=106.31  Aligned_cols=84  Identities=23%  Similarity=0.385  Sum_probs=65.6

Q ss_pred             CCccCcCcccchHHhhccc--ccccCCeeEEEecCccc------CCCcceeeecccceEEEEEEEeccCCCcCCCCCCCH
Q psy14393          1 MLDEEIGGSQGMSLFVTTD--AFKKMNVGCALDEGIAS------PTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTA   72 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~--~~~~~~~~~~idEG~~~------~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~~~nA   72 (114)
                      ++|||+||..|+++|++..  .+..  +++++.|..+.      +...+.+++++||.+|++|+++|+++|||+|...||
T Consensus       136 ~~dEE~g~~~g~~~l~~~~~~~~~~--~~~ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~~nA  213 (426)
T PRK07906        136 VADEEAGGTYGAHWLVDNHPELFEG--VTEAISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVNDDNA  213 (426)
T ss_pred             ecCcccchhhhHHHHHHHHHHhccc--hheEEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCCCCH
Confidence            4799998877999998752  2222  34567664321      112246899999999999999999999999988999


Q ss_pred             HHHHHHHHHHHHHH
Q psy14393         73 AEKVNYIMNKFLAL   86 (114)
Q Consensus        73 i~~~~~~i~~l~~~   86 (114)
                      |..++++|.+|.++
T Consensus       214 i~~~~~~l~~l~~~  227 (426)
T PRK07906        214 VTRLAEAVARIGRH  227 (426)
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999999764

>TIGR03320 ygeY M20/DapE family protein YgeY

Probab=99.41  E-value=8.3e-13  Score=104.51  Aligned_cols=81  Identities=22%  Similarity=0.342  Sum_probs=64.5

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.++..+.+++++...++   ++++|   +++|+ ...+.+++||.+|++++++|+++|||.|. +.|||..++++
T Consensus       139 ~~dEE~~~g~~~~~~~~~~~~~---~d~~i---v~ep~-~~~i~~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~  211 (395)
T TIGR03320       139 TVQEEDCDGLCWQYIIEEDGIK---PEFVV---ITEPT-DMNIYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPI  211 (395)
T ss_pred             cccccccCchHHHHHHHhcCCC---CCEEE---EcCCC-ccceEEecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHH
Confidence            4689976434566777643333   67777   35675 56788999999999999999999999996 59999999999


Q ss_pred             HHHHHHHHH
Q psy14393         80 MNKFLALRE   88 (114)
Q Consensus        80 i~~l~~~~~   88 (114)
                      +.+|+++..
T Consensus       212 l~~l~~~~~  220 (395)
T TIGR03320       212 LKELSQLNA  220 (395)
T ss_pred             HHHHHHHHH
Confidence            999987654

Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.

>PRK08652 acetylornithine deacetylase; Provisional

Probab=99.41  E-value=8.8e-13  Score=101.85  Aligned_cols=79  Identities=25%  Similarity=0.360  Sum_probs=65.5

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.|+ .|++++++.  ++   .+++|.   .+|+ ...+++++||.+|++|+++|+++|+|.|+ +.|||..++++
T Consensus       116 ~~dEE~g~-~G~~~~~~~--~~---~d~~i~---~ep~-~~~i~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~  185 (347)
T PRK08652        116 VSDEEEGG-RGSALFAER--YR---PKMAIV---LEPT-DLKVAIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEM  185 (347)
T ss_pred             ecCcccCC-hhHHHHHHh--cC---CCEEEE---ecCC-CCceeeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHH
Confidence            58999986 699999974  33   366763   4665 35788999999999999999999999996 59999999999


Q ss_pred             HHHHHHHHHH
Q psy14393         80 MNKFLALREE   89 (114)
Q Consensus        80 i~~l~~~~~~   89 (114)
                      +.+|.++...
T Consensus       186 i~~l~~~~~~  195 (347)
T PRK08652        186 LEKLKELLKA  195 (347)
T ss_pred             HHHHHHHHHh
Confidence            9999876543

>PRK06446 hypothetical protein; Provisional

Probab=99.40  E-value=6e-13  Score=106.92  Aligned_cols=82  Identities=16%  Similarity=0.181  Sum_probs=64.7

Q ss_pred             CCccCcCcccchHHhhcc-c-ccccCCeeEEEecCccc-CCCcceeeecccceEEEEEEEec--cCCCcCCCC-CCCHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTT-D-AFKKMNVGCALDEGIAS-PTEVFALFNGERTIWQMKIHCPG--TPGHGSLLH-ENTAAE   74 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~-~-~~~~~~~~~~idEG~~~-~~~~~~i~~aeKG~~~~~v~v~G--~~gHsS~P~-~~nAi~   74 (114)
                      ++|||.|+ .|+++++++ + .++   ++++|.|+.+. +.....+++++||.+|++++++|  +++|||.|+ +.|||.
T Consensus       133 ~~dEE~g~-~g~~~~l~~~~~~~~---~d~vi~E~~~~~~~~~~~i~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~  208 (436)
T PRK06446        133 EGEEEIGS-PNLEDFIEKNKNKLK---ADSVIMEGAGLDPKGRPQIVLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAW  208 (436)
T ss_pred             EcccccCC-HhHHHHHHHHHHHhC---CCEEEECCCCccCCCCeEEEEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHH
Confidence            47999986 688888874 1 223   57888764332 22233689999999999999999  999999986 599999


Q ss_pred             HHHHHHHHHHHH
Q psy14393         75 KVNYIMNKFLAL   86 (114)
Q Consensus        75 ~~~~~i~~l~~~   86 (114)
                      .|+++|.+|.++
T Consensus       209 ~~~~~l~~l~~~  220 (436)
T PRK06446        209 DLVKLLSTLVDG  220 (436)
T ss_pred             HHHHHHHhhCCC
Confidence            999999999754

>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase

Probab=99.39  E-value=1e-12  Score=103.79  Aligned_cols=83  Identities=19%  Similarity=0.236  Sum_probs=66.4

Q ss_pred             CCccCcCcc-cchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHH
Q psy14393          1 MLDEEIGGS-QGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNY   78 (114)
Q Consensus         1 ~~DEE~Gg~-~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~   78 (114)
                      ++|||+|+. .|++++++... ....++++|   +++|+ ...+++++||.+|++++++|+++|||.|. +.|||..|++
T Consensus       136 ~~dEE~~~~~~G~~~~~~~~~-~~~~~d~~i---v~Ept-~~~i~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~  210 (373)
T TIGR01900       136 YDCEEVAAEKNGLGHIRDAHP-DWLAADFAI---IGEPT-GGGIEAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAAD  210 (373)
T ss_pred             EecccccCCCCCHHHHHHhCc-ccccCCEEE---EECCC-CCcccccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHH
Confidence            579998743 59999997521 111267777   36675 46789999999999999999999999995 5999999999


Q ss_pred             HHHHHHHHHH
Q psy14393         79 IMNKFLALRE   88 (114)
Q Consensus        79 ~i~~l~~~~~   88 (114)
                      ++.+|+++..
T Consensus       211 ~i~~l~~l~~  220 (373)
T TIGR01900       211 IINKLAAYEA  220 (373)
T ss_pred             HHHHHHHhhc
Confidence            9999987653

This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.

>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase

Probab=99.38  E-value=1.6e-12  Score=102.96  Aligned_cols=81  Identities=22%  Similarity=0.338  Sum_probs=64.8

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.++..|+.+++++..++   ++++|   +++|+ ...+.+++||.+|++|+++|+++|||.|. +.|||..++++
T Consensus       139 ~~dEE~~~g~~~~~~~~~~~~~---~d~~i---~~ep~-~~~i~~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~  211 (395)
T TIGR03526       139 TVQEEDCDGLCWQYIIEEDKIK---PEFVV---ITEPT-DMNIYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPI  211 (395)
T ss_pred             ecccccCCcHhHHHHHhccCCC---CCEEE---ecCCC-CceEEEEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHH
Confidence            4689954335778888754443   57777   35675 46788999999999999999999999996 59999999999


Q ss_pred             HHHHHHHHH
Q psy14393         80 MNKFLALRE   88 (114)
Q Consensus        80 i~~l~~~~~   88 (114)
                      +.+|+++..
T Consensus       212 i~~l~~~~~  220 (395)
T TIGR03526       212 LKELSQLNA  220 (395)
T ss_pred             HHHHHHhhh
Confidence            999987654

SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.

>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade

Probab=99.38  E-value=9.8e-13  Score=102.94  Aligned_cols=85  Identities=20%  Similarity=0.195  Sum_probs=64.1

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCC----cceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTE----VFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEK   75 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~----~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~   75 (114)
                      ++|||.++..|++.+++.-......+++++.   ++|+.    ...+++++||.+|++++++|+++|+|.|. +.|||..
T Consensus       127 ~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~---~ep~~~~~~~~~i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~  203 (370)
T TIGR01246       127 TSDEEGTAIDGTKKVVETLMARDELIDYCIV---GEPSSVKKLGDVIKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHK  203 (370)
T ss_pred             EeccccCCCcCHHHHHHHHHhcCCCCCEEEE---cCCCCcccCCceEEEeeeEEEEEEEEEEccCcccCCcccCCCHHHH
Confidence            4799987656999988631111123688873   34431    12478999999999999999999999996 5999999


Q ss_pred             HHHHHHHHHHHHH
Q psy14393         76 VNYIMNKFLALRE   88 (114)
Q Consensus        76 ~~~~i~~l~~~~~   88 (114)
                      +++++..|.++..
T Consensus       204 ~~~~i~~l~~~~~  216 (370)
T TIGR01246       204 AAPALAELTAIKW  216 (370)
T ss_pred             HHHHHHHHhhhhh
Confidence            9999999876543

This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.

>PRK13983 diaminopimelate aminotransferase; Provisional

Probab=99.38  E-value=2.2e-12  Score=101.37  Aligned_cols=82  Identities=21%  Similarity=0.217  Sum_probs=65.0

Q ss_pred             CCccCcCcccchHHhhcc--cccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTT--DAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVN   77 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~--~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~   77 (114)
                      ++|||.|+..|+++|++.  +.+.+  .++++.-..++|+ ...+.+++||.+|++|+++|+++|||+|+ +.|||..++
T Consensus       148 ~~dEE~g~~~g~~~~~~~~~~~~~~--~d~~i~~~~~~~~-~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~  224 (400)
T PRK13983        148 VSDEETGSKYGIQYLLKKHPELFKK--DDLILVPDAGNPD-GSFIEIAEKSILWLKFTVKGKQCHASTPENGINAHRAAA  224 (400)
T ss_pred             EeccccCCcccHHHHHhhcccccCC--CCEEEEecCCCCC-CceeEEeecceEEEEEEEEeEccccCCCCCCCCHHHHHH
Confidence            479999875699999985  33443  4555532224454 34678999999999999999999999996 599999999


Q ss_pred             HHHHHHHH
Q psy14393         78 YIMNKFLA   85 (114)
Q Consensus        78 ~~i~~l~~   85 (114)
                      +++.++.+
T Consensus       225 ~~i~~l~~  232 (400)
T PRK13983        225 DFALELDE  232 (400)
T ss_pred             HHHHHHHH
Confidence            99999976

>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed

Probab=99.36  E-value=2.7e-12  Score=101.04  Aligned_cols=81  Identities=20%  Similarity=0.227  Sum_probs=65.7

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||+|+ .|+++++++..++   +++++.   ++|+....+.+++||.+|++|+++|+++|||.|. +.|||..|+++
T Consensus       142 ~~~EE~g~-~G~~~~~~~~~~~---~d~~i~---~~~~~~~~i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~  214 (394)
T PRK08651        142 VPDEETGG-TGTGYLVEEGKVT---PDYVIV---GEPSGLDNICIGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKI  214 (394)
T ss_pred             ecCccccc-hhHHHHHhccCCC---CCEEEE---ecCCCCCceEEecccEEEEEEEEEEeccccCCCccccCHHHHHHHH
Confidence            47999986 7999999864443   456652   4454322688999999999999999999999996 59999999999


Q ss_pred             HHHHHHHHH
Q psy14393         80 MNKFLALRE   88 (114)
Q Consensus        80 i~~l~~~~~   88 (114)
                      +.+|.++..
T Consensus       215 i~~l~~~~~  223 (394)
T PRK08651        215 AERLKSSLS  223 (394)
T ss_pred             HHHHHHHHH
Confidence            999987654

>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed

Probab=99.36  E-value=2.5e-12  Score=99.77  Aligned_cols=82  Identities=15%  Similarity=0.162  Sum_probs=66.1

Q ss_pred             CCccCcCcc-cchHHhhcc-cccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHH
Q psy14393          1 MLDEEIGGS-QGMSLFVTT-DAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVN   77 (114)
Q Consensus         1 ~~DEE~Gg~-~G~~~l~~~-~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~   77 (114)
                      ++|||+|+. .|++++++. +.+.  +++++|.   ++|+ ...+.+++||.+|++++++|+++|||.|+ +.|||..++
T Consensus       122 ~~~EE~~~~~~G~~~~~~~~~~~~--~~d~~i~---~ep~-~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~  195 (352)
T PRK13007        122 YDCEEVEAEANGLGRLAREHPEWL--AGDFAIL---LEPT-DGVIEAGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAA  195 (352)
T ss_pred             EecccccCCcccHHHHHHhccccc--CCCEEEE---ecCC-CCceEeeccceEEEEEEEEecccccCCCccCcCHHHHHH
Confidence            479998753 589999874 2222  2688874   4564 45789999999999999999999999996 599999999


Q ss_pred             HHHHHHHHHHH
Q psy14393         78 YIMNKFLALRE   88 (114)
Q Consensus        78 ~~i~~l~~~~~   88 (114)
                      +++.++.++..
T Consensus       196 ~~i~~l~~~~~  206 (352)
T PRK13007        196 PVLARLAAYEP  206 (352)
T ss_pred             HHHHHHHHhcc
Confidence            99999987654

>PRK06837 acetylornithine deacetylase; Provisional

Probab=99.35  E-value=5.4e-12  Score=101.10  Aligned_cols=81  Identities=19%  Similarity=0.275  Sum_probs=65.3

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.+| .|+.+++..+ +.   +++++   +++|+ ...+.+++||.+|++++++|+++|||.|. +.||+..++++
T Consensus       169 ~~dEE~~g-~g~~~~~~~~-~~---~d~~i---v~ep~-~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~  239 (427)
T PRK06837        169 VIEEESTG-NGALSTLQRG-YR---ADACL---IPEPT-GEKLVRAQVGVIWFRLRVRGAPVHVREAGTGANAIDAAYHL  239 (427)
T ss_pred             EeccccCC-HhHHHHHhcC-cC---CCEEE---EcCCC-CCccccccceeEEEEEEEEeeccccCCcccCcCHHHHHHHH
Confidence            46999876 5888877653 22   57776   35665 35688999999999999999999999996 59999999999


Q ss_pred             HHHHHHHHHHH
Q psy14393         80 MNKFLALREEE   90 (114)
Q Consensus        80 i~~l~~~~~~~   90 (114)
                      +.+|.++..+.
T Consensus       240 i~~l~~~~~~~  250 (427)
T PRK06837        240 IQALRELEAEW  250 (427)
T ss_pred             HHHHHHHHHHH
Confidence            99998876543

>PRK08262 hypothetical protein; Provisional

Probab=99.35  E-value=6.3e-12  Score=102.15  Aligned_cols=83  Identities=22%  Similarity=0.271  Sum_probs=63.7

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCc----------ccCCCcceeeecccceEEEEEEEeccCCCcCCCCCC
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGI----------ASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHEN   70 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~----------~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~~~   70 (114)
                      ++|||+|+ .|++++++.-..+...+++++++|.          .+|+  ..+++++||.+|++|+++|+++|||.|...
T Consensus       185 ~~dEE~g~-~G~~~l~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~p~--~~i~~~~kG~~~~~i~v~G~~~Hss~p~~~  261 (486)
T PRK08262        185 GHDEEVGG-LGARAIAELLKERGVRLAFVLDEGGAITEGVLPGVKKPV--ALIGVAEKGYATLELTARATGGHSSMPPRQ  261 (486)
T ss_pred             ecccccCC-cCHHHHHHHHHHhcCCEEEEEeCCceecccccCCCCceE--EeeEEeeeeeEEEEEEEecCCCCCCCCCCC
Confidence            47999987 5999988631111123677776542          1222  357899999999999999999999999669


Q ss_pred             CHHHHHHHHHHHHHHH
Q psy14393         71 TAAEKVNYIMNKFLAL   86 (114)
Q Consensus        71 nAi~~~~~~i~~l~~~   86 (114)
                      |||..++++|.+|+++
T Consensus       262 nai~~l~~~l~~l~~~  277 (486)
T PRK08262        262 TAIGRLARALTRLEDN  277 (486)
T ss_pred             CHHHHHHHHHHHHhhC
Confidence            9999999999999864

>PRK09290 allantoate amidohydrolase; Reviewed

Probab=99.33  E-value=1.8e-12  Score=103.39  Aligned_cols=48  Identities=10%  Similarity=0.105  Sum_probs=42.6

Q ss_pred             ceeeecccceEEEEEEEeccCCCcC-CC-C-CCCHHHHHHHHHHHHHHHHH
Q psy14393         41 FALFNGERTIWQMKIHCPGTPGHGS-LL-H-ENTAAEKVNYIMNKFLALRE   88 (114)
Q Consensus        41 ~~i~~aeKG~~~~~v~v~G~~gHsS-~P-~-~~nAi~~~~~~i~~l~~~~~   88 (114)
                      ..|.+++||..|++|+++|+++|+| .| . +.|||..+++++.+|+++..
T Consensus       206 ~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~NAI~~~~~~i~~l~~l~~  256 (413)
T PRK09290        206 IGVVTGIVGQRRYRVTFTGEANHAGTTPMALRRDALLAAAEIILAVERIAA  256 (413)
T ss_pred             EEEEeeeeccEEEEEEEEEECCCCCCCCchhccCHHHHHHHHHHHHHHHHH
Confidence            4588999999999999999999988 68 3 49999999999999977653

>TIGR01891 amidohydrolases amidohydrolase

Probab=99.33  E-value=1.6e-12  Score=101.92  Aligned_cols=83  Identities=13%  Similarity=0.128  Sum_probs=62.3

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEe-cCcc-cCCCc--ceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALD-EGIA-SPTEV--FALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEK   75 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~id-EG~~-~~~~~--~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~   75 (114)
                      ++|||.+  .|++++++++.+++  +++++. |..+ .+...  ....+++||..|++++++|+++|+|.|+ +.|||..
T Consensus       121 ~~dEE~~--~G~~~~~~~~~~~~--~d~~i~~e~~~~~~~~~~~~~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~  196 (363)
T TIGR01891       121 QPAEEGG--GGATKMIEDGVLDD--VDAILGLHPDPSIPAGTVGLRPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDA  196 (363)
T ss_pred             eecCcCc--chHHHHHHCCCCCC--cCEEEEECCCCCCCCeEEEECCCcceeecceEEEEEEeecccccCcccccCHHHH
Confidence            5899985  59999998765554  566664 2111 11111  2245688999999999999999999996 5999999


Q ss_pred             HHHHHHHHHHHH
Q psy14393         76 VNYIMNKFLALR   87 (114)
Q Consensus        76 ~~~~i~~l~~~~   87 (114)
                      |++++.+++++.
T Consensus       197 ~~~~i~~l~~~~  208 (363)
T TIGR01891       197 AAQLVVALQQIV  208 (363)
T ss_pred             HHHHHHHHHHHh
Confidence            999999997764

This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.

>PRK13004 peptidase; Reviewed

Probab=99.33  E-value=4.4e-12  Score=100.60  Aligned_cols=81  Identities=21%  Similarity=0.317  Sum_probs=66.2

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.++..|++++++++.++   +++++.   ++|+ ...+.+++||.+|++|+++|+++|||.|. +.|||..++++
T Consensus       141 ~~~EE~~~g~~~~~~~~~~~~~---~d~~i~---~e~~-~~~i~~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~  213 (399)
T PRK13004        141 TVQEEDCDGLCWRYIIEEDKIK---PDFVVI---TEPT-DLNIYRGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPI  213 (399)
T ss_pred             EcccccCcchhHHHHHHhcCCC---CCEEEE---ccCC-CCceEEecceEEEEEEEEeccccccCCCCCCCCHHHHHHHH
Confidence            4799975446888898864443   677773   4564 56788999999999999999999999996 59999999999


Q ss_pred             HHHHHHHHH
Q psy14393         80 MNKFLALRE   88 (114)
Q Consensus        80 i~~l~~~~~   88 (114)
                      +.+|.+++.
T Consensus       214 i~~l~~~~~  222 (399)
T PRK13004        214 LNELEELNP  222 (399)
T ss_pred             HHHHHhhcc
Confidence            999987754

>PRK07473 carboxypeptidase; Provisional

Probab=99.32  E-value=4.6e-12  Score=100.30  Aligned_cols=80  Identities=19%  Similarity=0.303  Sum_probs=64.8

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCC-cceeeecccceEEEEEEEeccCCCcC-CCC-CCCHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTE-VFALFNGERTIWQMKIHCPGTPGHGS-LLH-ENTAAEKVN   77 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~-~~~i~~aeKG~~~~~v~v~G~~gHsS-~P~-~~nAi~~~~   77 (114)
                      ++|||.|+ .|+++++++...+   ++++|   +++|+. ...+.+++||..|++|+++|+++|++ .|. +.|||..++
T Consensus       143 ~~dEE~g~-~g~~~~~~~~~~~---~d~~i---v~ep~~~~~~v~~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~  215 (376)
T PRK07473        143 TPDEEVGT-PSTRDLIEAEAAR---NKYVL---VPEPGRPDNGVVTGRYAIARFNLEATGRPSHAGATLSEGRSAIREMA  215 (376)
T ss_pred             eCCcccCC-ccHHHHHHHhhcc---CCEEE---EeCCCCCCCCEEEECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHH
Confidence            57999985 7999999853222   57777   466753 24688999999999999999999975 786 699999999


Q ss_pred             HHHHHHHHHH
Q psy14393         78 YIMNKFLALR   87 (114)
Q Consensus        78 ~~i~~l~~~~   87 (114)
                      +++.+|+++.
T Consensus       216 ~~i~~l~~~~  225 (376)
T PRK07473        216 RQILAIDAMT  225 (376)
T ss_pred             HHHHHHHHhc
Confidence            9999997764

>PRK08201 hypothetical protein; Provisional

Probab=99.27  E-value=8.8e-12  Score=100.51  Aligned_cols=80  Identities=23%  Similarity=0.312  Sum_probs=61.0

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCC----cceeeecccceEEEEEEEeccCC--CcCCCC-C-CCH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTE----VFALFNGERTIWQMKIHCPGTPG--HGSLLH-E-NTA   72 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~----~~~i~~aeKG~~~~~v~v~G~~g--HsS~P~-~-~nA   72 (114)
                      ++|||+|+ .|+.+++++.. ....++++|.   ++|+.    ...|++++||.+|++|+++|+++  |||.|. . .||
T Consensus       151 ~~dEE~g~-~g~~~~l~~~~-~~~~~d~~ii---~e~~~~~~~~~~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nA  225 (456)
T PRK08201        151 EGEEEIGS-PNLDSFVEEEK-DKLAADVVLI---SDTTLLGPGKPAICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNA  225 (456)
T ss_pred             EcccccCC-ccHHHHHHhhH-HhccCCEEEE---eCCCcCCCCCEEEEEecCCeEEEEEEEEeCCCCCccccccCcCCCH
Confidence            57999987 58888886411 1112466663   34431    23589999999999999999999  999875 4 799


Q ss_pred             HHHHHHHHHHHHH
Q psy14393         73 AEKVNYIMNKFLA   85 (114)
Q Consensus        73 i~~~~~~i~~l~~   85 (114)
                      |..|+++|.+|++
T Consensus       226 i~~~~~~l~~l~~  238 (456)
T PRK08201        226 LHALVQLLASLHD  238 (456)
T ss_pred             HHHHHHHHHhcCC
Confidence            9999999999975

>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase

Probab=99.25  E-value=1.9e-11  Score=94.74  Aligned_cols=73  Identities=26%  Similarity=0.342  Sum_probs=59.3

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCCCCCHHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIM   80 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~~~nAi~~~~~~i   80 (114)
                      ++|||.|+ .|+++++++.  +   .+++|   +++|+....+++++||.+|++++++|+++|||.|.  ||+..+.+++
T Consensus       109 ~~dEE~g~-~G~~~~~~~~--~---~~~~i---i~ept~~~~i~~~~kG~~~~~v~~~G~~~Hss~~~--~ai~~~~~~~  177 (336)
T TIGR01902       109 LVDEESSS-KGAREVIDKN--Y---PFYVI---VGEPSGAEGITLGYKGSLQLKIMCEGTPFHSSSAG--NAAELLIDYS  177 (336)
T ss_pred             EeCcccCC-ccHHHHHhhc--C---CCEEE---EecCCCCcceeeeeeeEEEEEEEEEecCcccCCCh--hHHHHHHHHH
Confidence            57999975 7999999852  2   23555   35676434688999999999999999999999885  4999999999


Q ss_pred             HHHH
Q psy14393         81 NKFL   84 (114)
Q Consensus        81 ~~l~   84 (114)
                      .+|.
T Consensus       178 ~~l~  181 (336)
T TIGR01902       178 KKII  181 (336)
T ss_pred             HHHH
Confidence            9886

This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.

>PRK12892 allantoate amidohydrolase; Reviewed

Probab=99.24  E-value=2.1e-11  Score=96.72  Aligned_cols=47  Identities=19%  Similarity=0.286  Sum_probs=41.2

Q ss_pred             ceeeecccceEEEEEEEeccCCCcCC-CC--CCCHHHHHHHHHHHHHHHH
Q psy14393         41 FALFNGERTIWQMKIHCPGTPGHGSL-LH--ENTAAEKVNYIMNKFLALR   87 (114)
Q Consensus        41 ~~i~~aeKG~~~~~v~v~G~~gHsS~-P~--~~nAi~~~~~~i~~l~~~~   87 (114)
                      ..|.+++||..|++|+++|+++|+|. |.  +.|||..+++++.+|+++.
T Consensus       206 ~~i~~~~kG~~~~~i~v~G~~aHa~~~p~~~g~nAi~~a~~~i~~l~~~~  255 (412)
T PRK12892        206 VGVVTGIVGIWQYRITVTGEAGHAGTTPMALRRDAGLAAAEMIAAIDEHF  255 (412)
T ss_pred             EEEEEEeccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence            46889999999999999999999875 53  3899999999999997753

>PLN02280 IAA-amino acid hydrolase

Probab=99.22  E-value=2.9e-11  Score=99.11  Aligned_cols=86  Identities=14%  Similarity=0.058  Sum_probs=61.7

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCc--ceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEV--FALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVN   77 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~--~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~   77 (114)
                      ++|||+|  .|+++|++++.+++.++.+++--+.++|+..  .......+|..|++|+++|+++|+|+|+ +.|||..++
T Consensus       217 ~pdEE~g--~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa  294 (478)
T PLN02280        217 QPAEEAG--NGAKRMIGDGALDDVEAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAAS  294 (478)
T ss_pred             ccccccc--chHHHHHHCCCCcCCCEEEEEecCCCCCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHH
Confidence            5899985  4999999987776533333332111233211  1123455699999999999999999996 599999999


Q ss_pred             HHHHHHHHHHH
Q psy14393         78 YIMNKFLALRE   88 (114)
Q Consensus        78 ~~i~~l~~~~~   88 (114)
                      +++..++++..
T Consensus       295 ~li~~l~~l~~  305 (478)
T PLN02280        295 AAVISLQGIVS  305 (478)
T ss_pred             HHHHHHHHHHh
Confidence            99999877643

>PRK12893 allantoate amidohydrolase; Reviewed

Probab=99.22  E-value=4.1e-11  Score=95.24  Aligned_cols=49  Identities=12%  Similarity=0.148  Sum_probs=43.3

Q ss_pred             cceeeecccceEEEEEEEeccCCCcCC-CC--CCCHHHHHHHHHHHHHHHHH
Q psy14393         40 VFALFNGERTIWQMKIHCPGTPGHGSL-LH--ENTAAEKVNYIMNKFLALRE   88 (114)
Q Consensus        40 ~~~i~~aeKG~~~~~v~v~G~~gHsS~-P~--~~nAi~~~~~~i~~l~~~~~   88 (114)
                      ...+++++||..|++|+++|+++|+|. |.  +.|||..+++++.+|+++..
T Consensus       204 ~~~i~~~~kG~~~~~i~v~G~~aHas~~p~~~G~NAI~~a~~~i~~l~~~~~  255 (412)
T PRK12893        204 PIGVVTGIQGIRWLEVTVEGQAAHAGTTPMAMRRDALVAAARIILAVERIAA  255 (412)
T ss_pred             cEEEEeeecccEEEEEEEEEECCCcCCCcchhccCHHHHHHHHHHHHHHHHH
Confidence            456889999999999999999999886 73  59999999999999987654

>PRK12890 allantoate amidohydrolase; Reviewed

Probab=99.20  E-value=4.2e-11  Score=95.39  Aligned_cols=48  Identities=8%  Similarity=0.056  Sum_probs=42.5

Q ss_pred             cceeeecccceEEEEEEEeccCCCcCC-CC-C-CCHHHHHHHHHHHHHHHH
Q psy14393         40 VFALFNGERTIWQMKIHCPGTPGHGSL-LH-E-NTAAEKVNYIMNKFLALR   87 (114)
Q Consensus        40 ~~~i~~aeKG~~~~~v~v~G~~gHsS~-P~-~-~nAi~~~~~~i~~l~~~~   87 (114)
                      ...+++++||.+|++|+++|+++|+|. |. + .|||..+++++.+|+++.
T Consensus       206 ~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~i~~l~~~~  256 (414)
T PRK12890        206 PIGVVTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAELVTAMERRA  256 (414)
T ss_pred             ceEEEEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHHHHHHHHHHH
Confidence            356889999999999999999999985 73 4 899999999999997765

>PRK07338 hypothetical protein; Provisional

Probab=99.19  E-value=4.9e-11  Score=94.37  Aligned_cols=80  Identities=20%  Similarity=0.165  Sum_probs=62.1

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCC-cceeeecccceEEEEEEEeccCCCcCC-CC-CCCHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTE-VFALFNGERTIWQMKIHCPGTPGHGSL-LH-ENTAAEKVN   77 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~-~~~i~~aeKG~~~~~v~v~G~~gHsS~-P~-~~nAi~~~~   77 (114)
                      ++|||+|+ .|+++++++.. ..  .++++   +.+|+. ...+.+++||.+|++|+++|+++|||. |. +.|||..++
T Consensus       160 ~~dEE~g~-~g~~~~~~~~~-~~--~~~~i---~~ep~~~~~~v~~~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~  232 (402)
T PRK07338        160 NPDEEIGS-PASAPLLAELA-RG--KHAAL---TYEPALPDGTLAGARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAA  232 (402)
T ss_pred             ECCcccCC-hhhHHHHHHHh-cc--CcEEE---EecCCCCCCcEEeecceeEEEEEEEEeEcccCCCCcccCccHHHHHH
Confidence            47999986 69999887522 22  35555   245542 245778999999999999999999997 64 599999999


Q ss_pred             HHHHHHHHHH
Q psy14393         78 YIMNKFLALR   87 (114)
Q Consensus        78 ~~i~~l~~~~   87 (114)
                      +++.+|+++.
T Consensus       233 ~~i~~l~~l~  242 (402)
T PRK07338        233 ELALALHALN  242 (402)
T ss_pred             HHHHHHHhhh
Confidence            9999997654

>PRK07907 hypothetical protein; Provisional

Probab=99.17  E-value=5.4e-11  Score=95.89  Aligned_cols=81  Identities=11%  Similarity=0.076  Sum_probs=61.0

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCc----ceeeecccceEEEEEEEe--ccCCCcCCCC--CCCH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEV----FALFNGERTIWQMKIHCP--GTPGHGSLLH--ENTA   72 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~----~~i~~aeKG~~~~~v~v~--G~~gHsS~P~--~~nA   72 (114)
                      ++|||+|+ .|++++++... ...+++++|.   ++|+..    -.+.+++||.+|++++++  |+++|||.|.  ..||
T Consensus       152 ~~dEE~g~-~g~~~~l~~~~-~~~~~d~~iv---~E~~~~~~~~p~i~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nA  226 (449)
T PRK07907        152 EGEEEMGS-PSLERLLAEHP-DLLAADVIVI---ADSGNWSVGVPALTTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDA  226 (449)
T ss_pred             EcCcccCC-ccHHHHHHhch-HhhcCCEEEE---ecCCcCCCCCeEEEEecCCcEEEEEEEEECCCCCCCccccccCCCH
Confidence            47999987 69999998521 1122566663   344321    147899999999999999  9999999863  5899


Q ss_pred             HHHHHHHHHHHHHH
Q psy14393         73 AEKVNYIMNKFLAL   86 (114)
Q Consensus        73 i~~~~~~i~~l~~~   86 (114)
                      |..++++|.+|.+.
T Consensus       227 i~~~~~~l~~l~~~  240 (449)
T PRK07907        227 LTALVRLLATLHDE  240 (449)
T ss_pred             HHHHHHHHHhhCCC
Confidence            99999999999753

>PRK06133 glutamate carboxypeptidase; Reviewed

Probab=99.13  E-value=1.4e-10  Score=92.61  Aligned_cols=79  Identities=16%  Similarity=0.159  Sum_probs=62.1

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCc-ceeeecccceEEEEEEEeccCCCc-CCCC-CCCHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEV-FALFNGERTIWQMKIHCPGTPGHG-SLLH-ENTAAEKVN   77 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~-~~i~~aeKG~~~~~v~v~G~~gHs-S~P~-~~nAi~~~~   77 (114)
                      ++|||.|+ .|+++++++ ...+  ++++++   .+|+.. ..+.+++||.+|++++++|+++|| +.|. +.|||..++
T Consensus       167 ~~dEE~g~-~G~~~~~~~-~~~~--~d~~i~---~ep~~~~~~v~~~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~  239 (410)
T PRK06133        167 NPDEETGS-PGSRELIAE-LAAQ--HDVVFS---CEPGRAKDALTLATSGIATALLEVKGKASHAGAAPELGRNALYELA  239 (410)
T ss_pred             ECCcccCC-ccHHHHHHH-Hhcc--CCEEEE---eCCCCCCCCEEEeccceEEEEEEEEeeccccCCCcccCcCHHHHHH
Confidence            48999985 699999975 2222  577774   345432 357899999999999999999996 5785 599999999


Q ss_pred             HHHHHHHHH
Q psy14393         78 YIMNKFLAL   86 (114)
Q Consensus        78 ~~i~~l~~~   86 (114)
                      +++..|+++
T Consensus       240 ~~i~~l~~~  248 (410)
T PRK06133        240 HQLLQLRDL  248 (410)
T ss_pred             HHHHHHHhc
Confidence            999988664

>PLN02693 IAA-amino acid hydrolase

Probab=99.13  E-value=1.3e-10  Score=94.18  Aligned_cols=82  Identities=17%  Similarity=0.073  Sum_probs=60.4

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCc-cee----eecccceEEEEEEEeccCCCcCCCC-CCCHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEV-FAL----FNGERTIWQMKIHCPGTPGHGSLLH-ENTAAE   74 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~-~~i----~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~   74 (114)
                      ++||| ++ .|++.|++++.+++  +++++.|= .+|... -.+    ...+||..|++++++|+++|+|.|+ +.|||.
T Consensus       167 ~pdEE-~~-~Ga~~~i~~g~~~~--~~~iig~h-~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~  241 (437)
T PLN02693        167 QPAEE-GL-SGAKKMREEGALKN--VEAIFGIH-LSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVV  241 (437)
T ss_pred             EEccc-ch-hhHHHHHHCCCCCC--CCEEEEEe-cCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHH
Confidence            47999 43 59999998876664  45666331 122111 112    1236899999999999999999996 599999


Q ss_pred             HHHHHHHHHHHHH
Q psy14393         75 KVNYIMNKFLALR   87 (114)
Q Consensus        75 ~~~~~i~~l~~~~   87 (114)
                      .+++++.+|+++.
T Consensus       242 ~aa~~i~~l~~~~  254 (437)
T PLN02693        242 AASSIVLSLQQLV  254 (437)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998764

>PRK09104 hypothetical protein; Validated

Probab=99.13  E-value=1.4e-10  Score=93.77  Aligned_cols=83  Identities=16%  Similarity=0.161  Sum_probs=59.8

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEe-cCcccCCCcceeeecccceEEEEEEEec--cCCCcCCC-C-CCCHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALD-EGIASPTEVFALFNGERTIWQMKIHCPG--TPGHGSLL-H-ENTAAEK   75 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~id-EG~~~~~~~~~i~~aeKG~~~~~v~v~G--~~gHsS~P-~-~~nAi~~   75 (114)
                      ++|||+|+ .|+..++++.. ..+.++++|. |+.........|.+++||.+|++++++|  +++|||+| . +.|||..
T Consensus       159 ~~dEE~g~-~g~~~~l~~~~-~~~~~d~~iv~E~~~~~~~~~~i~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~  236 (464)
T PRK09104        159 EGEEESGS-PSLVPFLEANA-EELKADVALVCDTGMWDRETPAITTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRV  236 (464)
T ss_pred             ECccccCC-ccHHHHHHhhH-HhcCCCEEEEeCCCCCCCCCeEEEeecCCeEEEEEEEEeCCCCccccccCCccCCHHHH
Confidence            47999987 57777766411 1123577774 3211111123688999999999999999  78999985 3 5999999


Q ss_pred             HHHHHHHHHH
Q psy14393         76 VNYIMNKFLA   85 (114)
Q Consensus        76 ~~~~i~~l~~   85 (114)
                      |++++.+|.+
T Consensus       237 ~~~~l~~l~~  246 (464)
T PRK09104        237 LTRILAGLHD  246 (464)
T ss_pred             HHHHHHhccC
Confidence            9999999865

>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family

Probab=99.11  E-value=2.5e-10  Score=90.80  Aligned_cols=48  Identities=10%  Similarity=0.090  Sum_probs=42.4

Q ss_pred             ceeeecccceEEEEEEEeccCCCcCCCC---CCCHHHHHHHHHHHHHHHHH
Q psy14393         41 FALFNGERTIWQMKIHCPGTPGHGSLLH---ENTAAEKVNYIMNKFLALRE   88 (114)
Q Consensus        41 ~~i~~aeKG~~~~~v~v~G~~gHsS~P~---~~nAi~~~~~~i~~l~~~~~   88 (114)
                      +.|++++||.+|++|+++|+++|+|.|+   +.|||..+++++.+|+++..
T Consensus       198 ~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~~  248 (401)
T TIGR01879       198 IGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKAK  248 (401)
T ss_pred             EEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHH
Confidence            5688999999999999999999998653   48999999999999977654

Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.

>PRK13381 peptidase T; Provisional

Probab=99.10  E-value=1.5e-10  Score=92.04  Aligned_cols=78  Identities=17%  Similarity=0.160  Sum_probs=59.7

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCC-CC-CCCHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSL-LH-ENTAAEKVNY   78 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~-P~-~~nAi~~~~~   78 (114)
                      ++|||.|+ .|+++++.+ .++ .+..++++  +++|.   .+.+++||..|++|+++|+++|+|. |. +.|||..+++
T Consensus       168 ~~dEE~g~-~G~~~~~~~-~~~-~d~~~~~~--~~~~~---~i~~~~~G~~~~~v~v~Gk~aHa~~~p~~g~NAI~~a~~  239 (404)
T PRK13381        168 VPDEEIGL-RGAKALDLA-RFP-VDFAYTID--CCELG---EVVYENFNAASAEITITGVTAHPMSAKGVLVNPILMAND  239 (404)
T ss_pred             Eccccccc-ccHHHHHHh-cCC-CCEEEEec--CCCcc---eEEEecCcceEEEEEEEeEecCCCCCcccCcCHHHHHHH
Confidence            47999975 799999764 333 12344454  33443   4678899999999999999999875 65 5999999999


Q ss_pred             HHHHHHHH
Q psy14393         79 IMNKFLAL   86 (114)
Q Consensus        79 ~i~~l~~~   86 (114)
                      ++.+|+++
T Consensus       240 ~i~~l~~~  247 (404)
T PRK13381        240 FISHFPRQ  247 (404)
T ss_pred             HHHhCCcc
Confidence            99988665

>PRK07318 dipeptidase PepV; Reviewed

Probab=99.07  E-value=2.4e-10  Score=92.69  Aligned_cols=41  Identities=22%  Similarity=0.277  Sum_probs=37.0

Q ss_pred             ecccceE-----EEEEEEeccCCCcCCCC-CCCHHHHHHHHHHHHHH
Q psy14393         45 NGERTIW-----QMKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKFLA   85 (114)
Q Consensus        45 ~aeKG~~-----~~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l~~   85 (114)
                      .++||.+     |++|+++|+++|||.|+ +.|||..|+++|.+|++
T Consensus       245 ~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~  291 (466)
T PRK07318        245 NGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNL  291 (466)
T ss_pred             cCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccC
Confidence            3789877     89999999999999996 59999999999999864

>TIGR01887 dipeptidaselike dipeptidase, putative

Probab=99.05  E-value=1.1e-09  Score=88.81  Aligned_cols=36  Identities=19%  Similarity=0.243  Sum_probs=33.9

Q ss_pred             ceE-----EEEEEEeccCCCcCCCC-CCCHHHHHHHHHHHHH
Q psy14393         49 TIW-----QMKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKFL   84 (114)
Q Consensus        49 G~~-----~~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l~   84 (114)
                      |.+     |++|+++|+++|||.|. +.|||.+|++++..+.
T Consensus       236 g~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~  277 (447)
T TIGR01887       236 GSFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLN  277 (447)
T ss_pred             eEEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhcc
Confidence            888     89999999999999996 6999999999999986

This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.

>PRK07079 hypothetical protein; Provisional

Probab=99.05  E-value=6.8e-10  Score=90.01  Aligned_cols=83  Identities=14%  Similarity=0.228  Sum_probs=58.9

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEe-cCcccCCCcceeeecccceEEEEEEEecc--CCCcCCCCC--CCHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALD-EGIASPTEVFALFNGERTIWQMKIHCPGT--PGHGSLLHE--NTAAEK   75 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~id-EG~~~~~~~~~i~~aeKG~~~~~v~v~G~--~gHsS~P~~--~nAi~~   75 (114)
                      ++|||+|+ .|+++++++.. ....++++|. |+.....+...+++++||.+|++|+++|+  +.||+.+.+  .||+..
T Consensus       159 ~~dEE~g~-~G~~~l~~~~~-~~~~~d~~iv~e~~~~~~~~~~i~~g~kG~~~~~v~v~G~~~~~hs~~~~g~~~nai~~  236 (469)
T PRK07079        159 EMGEEIGS-PGLAEVCRQHR-EALAADVLIASDGPRLSAERPTLFLGSRGAVNFRLRVNLRDGAHHSGNWGGLLRNPGTV  236 (469)
T ss_pred             ECccccCC-ccHHHHHHHhH-HhcCCCEEEEeCCCccCCCCeEEEEecceEEEEEEEEeeCCCCCCCCccccccCCHHHH
Confidence            48999986 69999998521 1122577775 22111112245889999999999999998  456664433  799999


Q ss_pred             HHHHHHHHHH
Q psy14393         76 VNYIMNKFLA   85 (114)
Q Consensus        76 ~~~~i~~l~~   85 (114)
                      ++++|.++.+
T Consensus       237 l~~ai~~l~~  246 (469)
T PRK07079        237 LAHAIASLVD  246 (469)
T ss_pred             HHHHHHHhCC
Confidence            9999999854

>TIGR01886 dipeptidase dipeptidase PepV

Probab=99.03  E-value=8.2e-10  Score=89.87  Aligned_cols=39  Identities=15%  Similarity=0.243  Sum_probs=34.1

Q ss_pred             ecccceE---------EEEEEEeccCCCcCCCC-CCCHHHHHHHHHHHH
Q psy14393         45 NGERTIW---------QMKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKF   83 (114)
Q Consensus        45 ~aeKG~~---------~~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l   83 (114)
                      .++||.+         |++|+++|+++|||+|+ +.|||..|+++|..+
T Consensus       240 ~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~  288 (466)
T TIGR01886       240 LADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQY  288 (466)
T ss_pred             HhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhc
Confidence            3577765         89999999999999996 699999999999873

This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.

>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]

Probab=98.99  E-value=1.7e-09  Score=85.84  Aligned_cols=78  Identities=15%  Similarity=0.210  Sum_probs=52.3

Q ss_pred             CCccCcCcccchHHhhccccc-ccCCeeEEEecCcccC----CCcceeeecccceEEEEEEEeccCCCcCC--CC-CCCH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAF-KKMNVGCALDEGIASP----TEVFALFNGERTIWQMKIHCPGTPGHGSL--LH-ENTA   72 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~-~~~~~~~~idEG~~~~----~~~~~i~~aeKG~~~~~v~v~G~~gHsS~--P~-~~nA   72 (114)
                      ++|||+|+ .|+..++....- ....++++|.   ++|    .....+.+++||.+|++++++|+++|+|.  |. +.|+
T Consensus       147 ~~dEE~g~-~~~~~~~~~~~~~~~~~~d~~i~---~E~~~~~~~~~~~~~~~kG~~~~~v~v~G~~~Has~~~p~~~~n~  222 (409)
T COG0624         147 TADEESGG-AGGKAYLEEGEEALGIRPDYEIV---GEPTLESEGGDIIVVGHKGSLWLEVTVKGKAGHASTTPPDLGRNP  222 (409)
T ss_pred             EeccccCC-cchHHHHHhcchhhccCCCEEEe---CCCCCcccCCCeEEEcceeEEEEEEEEEeecccccccCCcccccH
Confidence            47999998 566666654221 1123566663   344    23456677999999999999999999999  63 5995


Q ss_pred             HHHHHHHHHH
Q psy14393         73 AEKVNYIMNK   82 (114)
Q Consensus        73 i~~~~~~i~~   82 (114)
                      +..+.+++.+
T Consensus       223 i~~a~~~~~~  232 (409)
T COG0624         223 IHAAIEALAE  232 (409)
T ss_pred             HHHHHHHHHH
Confidence            5444444433

>PRK12891 allantoate amidohydrolase; Reviewed

Probab=98.99  E-value=1.8e-09  Score=86.29  Aligned_cols=49  Identities=10%  Similarity=0.075  Sum_probs=42.8

Q ss_pred             cceeeecccceEEEEEEEeccCCCcC-CCC--CCCHHHHHHHHHHHHHHHHH
Q psy14393         40 VFALFNGERTIWQMKIHCPGTPGHGS-LLH--ENTAAEKVNYIMNKFLALRE   88 (114)
Q Consensus        40 ~~~i~~aeKG~~~~~v~v~G~~gHsS-~P~--~~nAi~~~~~~i~~l~~~~~   88 (114)
                      ...|++++||..|++|+++|+++|+| .|.  +.|||..+++++.+|+++..
T Consensus       204 ~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~  255 (414)
T PRK12891        204 TIGVVTAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFLDALGR  255 (414)
T ss_pred             cEEEEeeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHHHHHHH
Confidence            35688999999999999999999988 564  49999999999999977643

>TIGR01883 PepT-like peptidase T-like protein

Probab=98.97  E-value=1.5e-09  Score=84.64  Aligned_cols=78  Identities=22%  Similarity=0.263  Sum_probs=58.4

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCc-CCCC-CCCHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHG-SLLH-ENTAAEKVNY   78 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHs-S~P~-~~nAi~~~~~   78 (114)
                      ++|||.|+ .|+++|.+.. +. .++.+++++    +.+...+++++||.+|++++++|+++|+ +.|+ +.||+..+++
T Consensus       130 ~~~EE~g~-~G~~~~~~~~-~~-~~~~~~~~~----~~~~~~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~  202 (361)
T TIGR01883       130 TVKEELGL-IGMRLFDESK-IT-AAYGYCLDA----PGEVGNIQLAAPTQVKVDATIAGKDAHAGLVPEDGISAISVARM  202 (361)
T ss_pred             EcccccCc-hhHhHhChhh-cC-cceeEEEeC----CCCcceEEecCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHH
Confidence            57999874 7999888632 22 123445542    1123468899999999999999999998 5786 5999999999


Q ss_pred             HHHHHHH
Q psy14393         79 IMNKFLA   85 (114)
Q Consensus        79 ~i~~l~~   85 (114)
                      ++..|..
T Consensus       203 ~i~~l~~  209 (361)
T TIGR01883       203 AIHAMRL  209 (361)
T ss_pred             HHHhccc
Confidence            9988854

This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.

>PRK08596 acetylornithine deacetylase; Validated

Probab=98.96  E-value=4e-09  Score=84.44  Aligned_cols=79  Identities=16%  Similarity=0.217  Sum_probs=61.6

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccC----------CCcCCCC-C
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTP----------GHGSLLH-E   69 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~----------gHsS~P~-~   69 (114)
                      ++|||.|+ .|++++++++ +.   ++++|.   ++|+. .. .+++||.++++++++|.+          +|++.|. +
T Consensus       149 ~~dEE~g~-~G~~~~~~~~-~~---~d~~i~---~ep~~-~~-~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G  218 (421)
T PRK08596        149 VIGEEVGE-AGTLQCCERG-YD---ADFAVV---VDTSD-LH-MQGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFG  218 (421)
T ss_pred             EeccccCC-cCHHHHHhcC-CC---CCEEEE---CCCCC-Cc-cccccceeeEEEEEEeecccccccccccccccCCccC
Confidence            47999986 6999999863 32   577773   56643 33 489999998888888764          7999995 6


Q ss_pred             CCHHHHHHHHHHHHHHHHHH
Q psy14393         70 NTAAEKVNYIMNKFLALREE   89 (114)
Q Consensus        70 ~nAi~~~~~~i~~l~~~~~~   89 (114)
                      .|||..++++|.+|+++...
T Consensus       219 ~nai~~~~~~i~~l~~~~~~  238 (421)
T PRK08596        219 ASAIEKMMKIIQSLQELERH  238 (421)
T ss_pred             cCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999887543

>PRK07205 hypothetical protein; Provisional

Probab=98.95  E-value=2e-09  Score=86.66  Aligned_cols=34  Identities=9%  Similarity=-0.016  Sum_probs=30.6

Q ss_pred             EEEEEeccCCCcCCCC-CCCHHHHHHHHHHHHHHH
Q psy14393         53 MKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKFLAL   86 (114)
Q Consensus        53 ~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l~~~   86 (114)
                      .+++++|+++|||.|+ +.|||..+++++.+++++
T Consensus       240 ~~v~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~  274 (444)
T PRK07205        240 NEVTVLGKSVHAKDAPQGINAVIRLAKALVVLEPH  274 (444)
T ss_pred             cEEEEEeEEcccCCCccCcCHHHHHHHHHHhccHH
Confidence            3999999999999996 599999999999998764

>PRK06156 hypothetical protein; Provisional

Probab=98.89  E-value=3.3e-09  Score=87.42  Aligned_cols=34  Identities=12%  Similarity=0.242  Sum_probs=32.0

Q ss_pred             EEEEEEeccCCCcCCCC-CCCHHHHHHHHHHHHHH
Q psy14393         52 QMKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKFLA   85 (114)
Q Consensus        52 ~~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l~~   85 (114)
                      |++|+++|+++|||.|+ +.|||.++++++.+|++
T Consensus       300 ~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~  334 (520)
T PRK06156        300 DVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDG  334 (520)
T ss_pred             eEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccc
Confidence            99999999999999996 59999999999999875

>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []

Probab=98.82  E-value=3.1e-09  Score=69.75  Aligned_cols=45  Identities=27%  Similarity=0.316  Sum_probs=40.9

Q ss_pred             ecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHHHHHHHHHHHH
Q psy14393         45 NGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKFLALREE   89 (114)
Q Consensus        45 ~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l~~~~~~   89 (114)
                      +++||.+|++++++|+++|+|.|. +.||+..+++++..|.++..+
T Consensus         1 ~g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~   46 (111)
T PF07687_consen    1 IGHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFE   46 (111)
T ss_dssp             EEEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCH
T ss_pred             CcCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcc
Confidence            589999999999999999999885 599999999999999887654

This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....

>PRK05469 peptidase T; Provisional

Probab=98.82  E-value=1.4e-08  Score=80.82  Aligned_cols=77  Identities=22%  Similarity=0.151  Sum_probs=57.1

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCC-CC-CCCHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSL-LH-ENTAAEKVNY   78 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~-P~-~~nAi~~~~~   78 (114)
                      ++|||+|  .|+++++.. .+.. .+.++++   +++..  .+.+.++|..+++|+++|+++|+|. |. +.|||..+++
T Consensus       171 ~~dEE~g--~Ga~~~~~~-~~~~-~~~~~~~---~~~~g--~~~~~~~g~~~~~i~v~Gk~~Ha~~~p~~g~nAi~~~~~  241 (408)
T PRK05469        171 TPDEEIG--RGADKFDVE-KFGA-DFAYTVD---GGPLG--ELEYENFNAASAKITIHGVNVHPGTAKGKMVNALLLAAD  241 (408)
T ss_pred             ecccccC--CCHHHhhhh-hcCC-cEEEEec---CCCcc--eEEeccCceeEEEEEEeeecCCCCCCcccccCHHHHHHH
Confidence            5799986  599988743 2221 2455564   33432  3677899999999999999999875 65 5999999999


Q ss_pred             HHHHHHHH
Q psy14393         79 IMNKFLAL   86 (114)
Q Consensus        79 ~i~~l~~~   86 (114)
                      ++..|+++
T Consensus       242 ~i~~l~~~  249 (408)
T PRK05469        242 FHAMLPAD  249 (408)
T ss_pred             HHHhCCCC
Confidence            99887543

>TIGR01882 peptidase-T peptidase T

Probab=98.76  E-value=7.4e-09  Score=82.78  Aligned_cols=76  Identities=24%  Similarity=0.226  Sum_probs=56.9

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC--CCCHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH--ENTAAEKVNY   78 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~--~~nAi~~~~~   78 (114)
                      ++|||+|  .|+++|..+ .++ ..++++++   ++|+.  .+.+..+|..|++|+++|+++|+|.+.  ..|||..+.+
T Consensus       173 t~dEE~g--~Ga~~l~~~-~~~-~~~~~~i~---gep~g--~i~~~~~g~~~~~I~v~Gk~aHa~~~~~~g~nAi~~a~~  243 (410)
T TIGR01882       173 TPDEEIG--RGAHKFDVK-DFN-ADFAYTVD---GGPLG--ELEYETFSAAAAKITIQGNNVHPGTAKGKMINAAQIAID  243 (410)
T ss_pred             ECcccCC--cCcchhhhh-hcC-ccEEEEeC---CCCCC--eEEEccccceEEEEEEEEEecCcccChHHHHHHHHHHHH
Confidence            5899986  399888653 222 23567775   45653  356777999999999999999999984  4999999888


Q ss_pred             HHHHHHH
Q psy14393         79 IMNKFLA   85 (114)
Q Consensus        79 ~i~~l~~   85 (114)
                      ++..+..
T Consensus       244 ~~~~l~~  250 (410)
T TIGR01882       244 LHNLLPE  250 (410)
T ss_pred             HHHhcCC
Confidence            8766543

This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.

>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase

Probab=98.63  E-value=9e-08  Score=77.97  Aligned_cols=83  Identities=16%  Similarity=0.177  Sum_probs=53.3

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEec-C-----cccCCCc-ce------eeecccceEEEEEEEec-cCCCcCC
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDE-G-----IASPTEV-FA------LFNGERTIWQMKIHCPG-TPGHGSL   66 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idE-G-----~~~~~~~-~~------i~~aeKG~~~~~v~v~G-~~gHsS~   66 (114)
                      ++|||.| +.|+++|... .++. +..+++|- +     .++++.. ..      +...+||..|++++++| +++||+.
T Consensus       136 ~~dEE~g-~~Gs~~l~~~-~~~~-~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~  212 (477)
T TIGR01893       136 TVDEETG-MDGALGLDEN-WLSG-KILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGA  212 (477)
T ss_pred             EeccccC-chhhhhcChh-hcCC-cEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCcc
Confidence            5799986 5799999763 2221 11111110 0     1122211 11      11127999999999999 9999975


Q ss_pred             -CC-C-CCHHHHHHHHHHHHHHH
Q psy14393         67 -LH-E-NTAAEKVNYIMNKFLAL   86 (114)
Q Consensus        67 -P~-~-~nAi~~~~~~i~~l~~~   86 (114)
                       |. + .|||..++++|.++.+.
T Consensus       213 ~p~~~r~nAi~~aa~~i~~l~~~  235 (477)
T TIGR01893       213 DIHKGRANANKLMARVLNELKEN  235 (477)
T ss_pred             ccCCCCcCHHHHHHHHHHhhhhc
Confidence             63 4 69999999999998654

>PRK15026 aminoacyl-histidine dipeptidase; Provisional

Probab=98.59  E-value=1.5e-07  Score=77.45  Aligned_cols=75  Identities=16%  Similarity=0.218  Sum_probs=55.3

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecc------------------cceEEEEEEEec-cC
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGE------------------RTIWQMKIHCPG-TP   61 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~ae------------------KG~~~~~v~v~G-~~   61 (114)
                      ++|||+| ..|++++.. ..++   ++++|+   .+|.....+++++                  ||..+++|+++| ++
T Consensus       142 t~dEE~G-~~ga~~l~~-~~~~---~~~~i~---~e~~~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~g  213 (485)
T PRK15026        142 TMTEEAG-MDGAFGLQS-NWLQ---ADILIN---TDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKG  213 (485)
T ss_pred             EcccccC-cHhHHHhhh-ccCC---cCEEEE---eCCCCCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCC
Confidence            5899997 479999865 2333   577775   3443333454444                  677899999999 99


Q ss_pred             CCcCC-CC-CC-CHHHHHHHHHHHH
Q psy14393         62 GHGSL-LH-EN-TAAEKVNYIMNKF   83 (114)
Q Consensus        62 gHsS~-P~-~~-nAi~~~~~~i~~l   83 (114)
                      |||.. |. +. |||..|+++|.++
T Consensus       214 gHsG~~i~~g~~nAi~~la~~l~~~  238 (485)
T PRK15026        214 GHSGGEIHVGLGNANKLLVRFLAGH  238 (485)
T ss_pred             cCChHHHCCCCccHHHHHHHHHHHh
Confidence            99994 64 55 9999999999875

>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]

Probab=98.34  E-value=2.8e-06  Score=68.52  Aligned_cols=88  Identities=18%  Similarity=0.221  Sum_probs=61.3

Q ss_pred             CccCcCcccchHHhhcccccccCCeeEEEecC-ccc-CCCcceeee--cccceEEEEEEEeccCCCcCCCC-CCCHHHHH
Q psy14393          2 LDEEIGGSQGMSLFVTTDAFKKMNVGCALDEG-IAS-PTEVFALFN--GERTIWQMKIHCPGTPGHGSLLH-ENTAAEKV   76 (114)
Q Consensus         2 ~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG-~~~-~~~~~~i~~--aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~   76 (114)
                      +-||.++  |+..|++.+.|++. +|+++.-= .+. |.....+..  --=..-.|+++++|++||+|.|+ ..||+..+
T Consensus       135 PAEE~~~--Ga~~mi~~G~~~~~-vD~v~g~H~~p~~~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa  211 (392)
T COG1473         135 PAEEGGG--GAKAMIEDGVFDDF-VDAVFGLHPGPGLPVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAA  211 (392)
T ss_pred             ccccccc--cHHHHHhcCCcccc-ccEEEEecCCCCCCCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHH
Confidence            5699875  89999999888864 66666200 011 222111111  12235678999999999999997 49999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy14393         77 NYIMNKFLALREEEKN   92 (114)
Q Consensus        77 ~~~i~~l~~~~~~~~~   92 (114)
                      +.++..|+....+..+
T Consensus       212 ~~~v~~lq~ivsr~~~  227 (392)
T COG1473         212 AQLVTALQTIVSRNVD  227 (392)
T ss_pred             HHHHHHHHHHHhcccC
Confidence            9999999876665544

>TIGR03176 AllC allantoate amidohydrolase

Probab=98.29  E-value=2e-06  Score=68.99  Aligned_cols=63  Identities=14%  Similarity=0.160  Sum_probs=48.4

Q ss_pred             cceeeecccceEEEEEEEeccCCCcCCCC-C--CCHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCcccee
Q psy14393         40 VFALFNGERTIWQMKIHCPGTPGHGSLLH-E--NTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVT  106 (114)
Q Consensus        40 ~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~--~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~  106 (114)
                      ...|.+++||..|++|+++|+++|+|.|+ +  .|||..+++++..+.+...+    .....+.++|.++
T Consensus       198 ~igiv~~~~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~l~~~~~~----~~~~~~~tvG~I~  263 (406)
T TIGR03176       198 SIGVVNAIVGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQSIERAKE----IGDPLVLTFGKVE  263 (406)
T ss_pred             eEEEEeecccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHh----cCCCcEEEEEEEE
Confidence            35678999999999999999999999874 3  89999999999998664321    1222255666554

This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.

>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional

Probab=98.10  E-value=6e-06  Score=69.46  Aligned_cols=48  Identities=10%  Similarity=-0.028  Sum_probs=42.1

Q ss_pred             cceeeecccceEEEEEEEeccCCCcCCCC---CCCHHHHHHHHHHHHHHHH
Q psy14393         40 VFALFNGERTIWQMKIHCPGTPGHGSLLH---ENTAAEKVNYIMNKFLALR   87 (114)
Q Consensus        40 ~~~i~~aeKG~~~~~v~v~G~~gHsS~P~---~~nAi~~~~~~i~~l~~~~   87 (114)
                      ...|.+++||..|++|+++|+++|+|.|+   +.|||..+++++..++++.
T Consensus       382 ~igvV~g~~G~~~~~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~  432 (591)
T PRK13799        382 PLGIVTSIAGSARYICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRA  432 (591)
T ss_pred             cEEEEeeeccceEEEEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHH
Confidence            45688999999999999999999999753   4899999999999997653

>PRK08554 peptidase; Reviewed

Probab=97.93  E-value=1.2e-05  Score=65.28  Aligned_cols=79  Identities=13%  Similarity=0.101  Sum_probs=46.8

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEE-------ecc-------------
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHC-------PGT-------------   60 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v-------~G~-------------   60 (114)
                      ++|||+|+. +..++++.-.-....++++|+   ++|+....+..++||. ++++++       +|+             
T Consensus       132 ~~dEE~g~~-~~~~~~~~~~~~~~~~~~~iv---~Ept~~~~~~~~~kg~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  206 (438)
T PRK08554        132 TGDEEIGGA-MAMHIAEKLREEGKLPKYMIN---ADGIGMKPIIRRRKGF-GVTIRVPSEKVKVKGKLREQTFEIRTPVV  206 (438)
T ss_pred             EcccccCcc-ccHHHHHHHHhcCCCCCEEEE---eCCCCCcchhhcCCce-EEEEEecccccccccceeeeeeceeeccc
Confidence            479999874 444665520001123678884   6776433343455554 466653       444             


Q ss_pred             -CCCcCCCC-C--CCHHHHHHHHHHHHH
Q psy14393         61 -PGHGSLLH-E--NTAAEKVNYIMNKFL   84 (114)
Q Consensus        61 -~gHsS~P~-~--~nAi~~~~~~i~~l~   84 (114)
                       ++|+|.|. +  .+|+..+++++.++.
T Consensus       207 ~~~Ha~~~~~g~~~~~i~~~~~~~~~~~  234 (438)
T PRK08554        207 ETRHAAYFLPGVDTHPLIAASHFLRESN  234 (438)
T ss_pred             CccccccccCCcCchHHHHHHHHHhhcC
Confidence             49999873 3  556888887776654

>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional

Probab=97.88  E-value=2.8e-05  Score=65.39  Aligned_cols=46  Identities=11%  Similarity=-0.014  Sum_probs=41.1

Q ss_pred             ceeeecccceEEEEEEEeccCCCcCCCC---CCCHHHHHHHHHHHHHHH
Q psy14393         41 FALFNGERTIWQMKIHCPGTPGHGSLLH---ENTAAEKVNYIMNKFLAL   86 (114)
Q Consensus        41 ~~i~~aeKG~~~~~v~v~G~~gHsS~P~---~~nAi~~~~~~i~~l~~~   86 (114)
                      ..|.+++||..|++|+++|+++|+|.|+   +.|||..+++++..++++
T Consensus       383 ~gvV~~~~G~~~~~v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~  431 (591)
T PRK13590        383 LGIVTSINGSVRYVGEMIGMASHAGTTPMDRRRDAAAAVAELALYVEQR  431 (591)
T ss_pred             eEEEeeeeccEEEEEEEEeECCCCCCCCchhcccHHHHHHHHHHHHHHH
Confidence            5688999999999999999999999754   489999999999988664

>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]

Probab=92.93  E-value=0.083  Score=43.23  Aligned_cols=77  Identities=21%  Similarity=0.176  Sum_probs=56.5

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCCC--CCHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHE--NTAAEKVNY   78 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~~--~nAi~~~~~   78 (114)
                      ++|||.|+ .|+..+.-. .|.. +..+.+| |  ++  ...|.+.-.+...+++++.|+..|.....+  .||+..+.+
T Consensus       176 s~~Ee~g~-rg~~~~~~a-~f~a-~~ay~iD-G--g~--~g~i~~ea~~~~~~~~~~~g~~~h~~~a~~~~i~a~~~a~e  247 (414)
T COG2195         176 SPDEEIGG-RGAANKDVA-RFLA-DFAYTLD-G--GP--VGEIPREAFNAAAVRATIVGPNVHPGSAKGKMINALLLAAE  247 (414)
T ss_pred             cchHHhhh-hhhhhccHH-hhhc-ceeEecC-C--Cc--cCeeeeeccchheeeeeeeccCcCccchHHHHhhHHHhhhh
Confidence            57999986 688876543 3331 2567777 2  33  246778889999999999999999988743  889888777


Q ss_pred             HHHHHHH
Q psy14393         79 IMNKFLA   85 (114)
Q Consensus        79 ~i~~l~~   85 (114)
                      +...+..
T Consensus       248 ~~~~~~~  254 (414)
T COG2195         248 FILELPL  254 (414)
T ss_pred             hhhcCCc
Confidence            7776643

>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]

Probab=89.87  E-value=1.1  Score=37.43  Aligned_cols=83  Identities=17%  Similarity=0.145  Sum_probs=58.1

Q ss_pred             CCccCcCcccchHHhhcc-cccc-c--CCeeEEEecCcccCC----CcceeeecccceEEEEEEEeccCCCcCCCC-CCC
Q psy14393          1 MLDEEIGGSQGMSLFVTT-DAFK-K--MNVGCALDEGIASPT----EVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENT   71 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~-~~~~-~--~~~~~~idEG~~~~~----~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~n   71 (114)
                      ++|||+-+ .|++..+.. +.++ +  +.+-.+||=-...|.    ....++++--|.+---.-|.|...|.+.|. +.|
T Consensus       170 ~pdEE~~s-~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG~~f~Gvn  248 (553)
T COG4187         170 VPDEEVES-RGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVGYPFEGVN  248 (553)
T ss_pred             ccchhhhc-ccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEeeccccCCcccCCC
Confidence            68999975 799877753 1221 1  123445541111111    123578999999999999999999999995 799


Q ss_pred             HHHHHHHHHHHHH
Q psy14393         72 AAEKVNYIMNKFL   84 (114)
Q Consensus        72 Ai~~~~~~i~~l~   84 (114)
                      |-..++.+..+|+
T Consensus       249 an~maSei~~~le  261 (553)
T COG4187         249 ANFMASEITRRLE  261 (553)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999988874

>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=88.53  E-value=0.17  Score=35.29  Aligned_cols=31  Identities=26%  Similarity=0.334  Sum_probs=21.8

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEe
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALD   31 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~id   31 (114)
                      ++|||.|+..|+++|++++......+++++.
T Consensus        67 ~~~EE~g~~~g~~~l~~~~~~~~~~~~~~~~   97 (189)
T PF01546_consen   67 TPDEEIGSIGGAKHLLEEGAFFGLHPDYVII   97 (189)
T ss_dssp             ESTCCGTSTTHHHHHHHHCEEEEEEESEEEE
T ss_pred             cccccCCCcchhhhhhhhccccccccccccc
Confidence            4799999755999999864233333677774

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....

>KOG2276|consensus

Probab=83.25  E-value=3.8  Score=33.96  Aligned_cols=76  Identities=21%  Similarity=0.300  Sum_probs=52.1

Q ss_pred             ccCcCcccchHHhhcc---cccccCCeeEEEecCcccCC-----CcceeeecccceEEEEEEEec--cCCCcCCCCC--C
Q psy14393          3 DEEIGGSQGMSLFVTT---DAFKKMNVGCALDEGIASPT-----EVFALFNGERTIWQMKIHCPG--TPGHGSLLHE--N   70 (114)
Q Consensus         3 DEE~Gg~~G~~~l~~~---~~~~~~~~~~~idEG~~~~~-----~~~~i~~aeKG~~~~~v~v~G--~~gHsS~P~~--~   70 (114)
                      -||+|+ .|...+++.   ..|++  +|++..    ++.     ..-.+.++-+|.+.|.+.|.|  +=.||...-+  +
T Consensus       165 mEEsgS-~~L~~l~~~~kD~~~~~--vD~vci----SdnyWlg~kkPcltyGlRG~~yf~i~v~g~~~DlHSGvfGG~~h  237 (473)
T KOG2276|consen  165 MEESGS-EGLDELIEKEKDKFFKD--VDFVCI----SDNYWLGTKKPCLTYGLRGVIYFQIEVEGPSKDLHSGVFGGVVH  237 (473)
T ss_pred             chhccC-ccHHHHHHHHhhhhhcc--CCEEEe----eCceeccCCCcccccccccceeEEEEEeecccccccccccchhH
Confidence            589987 688777764   23444  677642    221     122456888999999999999  8889998754  5


Q ss_pred             CHHHHHHHHHHHHHH
Q psy14393         71 TAAEKVNYIMNKFLA   85 (114)
Q Consensus        71 nAi~~~~~~i~~l~~   85 (114)
                      -|+..|..++..|.+
T Consensus       238 E~m~dL~~~ms~Lv~  252 (473)
T KOG2276|consen  238 EAMNDLVLVMSSLVD  252 (473)
T ss_pred             HHHHHHHHHHHHhcC
Confidence            677677777666644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	114
1q7l_A	198	Zn-binding Domain Of The T347g Mutant Of Human Amin		7e-12

>pdb|1Q7L|A Chain A, Zn-binding Domain Of The T347g Mutant Of Human Aminoacylase- I Length = 198

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKI 55
           DEE+GG QGM LFV    F  +  G ALDEGIA+PT+ F +F  ER+ W +++
Sbjct: 146 DEEVGGHQGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRV 198

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	114
1q7l_A	198	Aminoacylase-1; catalysis, enzyme dimerization, si	5e-14
1lfw_A	470	PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac	3e-05
2rb7_A	364	Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat	3e-04

>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Length = 198

 Score = 63.6 bits (155), Expect = 5e-14
 Identities = 27/53 (50%), Positives = 36/53 (67%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKI 55
           DEE+GG QGM LFV    F  +  G ALDEGIA+PT+ F +F  ER+ W +++
Sbjct: 146 DEEVGGHQGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRV 198

>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Length = 470

 Score = 40.3 bits (94), Expect = 3e-05
 Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 11/90 (12%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           +EE     G+  ++  +    +          +   E + + NGE+ I+ ++        
Sbjct: 152 NEETNW-VGIDYYLKHEPTPDI--------VFSPDAE-YPIINGEQGIFTLEFSFKNDDT 201

Query: 63  HGSL-LHENTAAEKVNYIMNKFLALREEEK 91
            G   L +  A    N       A      
Sbjct: 202 KGDYVLDKFKAGIATNVTPQVTRATISGPD 231

>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Length = 364

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 20/114 (17%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEEIGG  G +  +       +     +            +   E+ I  +K+ C G   
Sbjct: 138 DEEIGGMNGAAKAL-----PLIRADYVV---ALDGGNPQQVITKEKGIIDIKLTCTGKAA 189

Query: 63  HGSLLHE--NTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVTTINITMLS 114
           HG+      N A + +     +   L  EE                T+N+  + 
Sbjct: 190 HGARPWMGVN-AVDLLMEDYTRLKTLFAEENEDHWH---------RTVNLGRIR 233

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	114
2f7v_A	369	Aectylcitrulline deacetylase; alpha/beta, hydrolas	99.41
2rb7_A	364	Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat	99.34
3pfo_A	433	Putative acetylornithine deacetylase; metal bindin	99.34
3ct9_A	356	Acetylornithine deacetylase; NP_812461.1, A putati	99.34
1vgy_A	393	Succinyl-diaminopimelate desuccinylase; structural	99.32
3ram_A	394	HMRA protein; two-domain, catalytic (alpha-beta-al	99.3
3isz_A	377	Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b	99.26
3tx8_A	369	Succinyl-diaminopimelate desuccinylase; peptidase,	99.25
1xmb_A	418	IAA-amino acid hydrolase homolog 2; structural gen	99.2
1ysj_A	404	Protein YXEP; M20 family peptidase, dinuclear meta	99.11
1cg2_A	393	Carboxypeptidase G2; metallocarboxypeptidase, hydr	99.1
3pfe_A	472	Succinyl-diaminopimelate desuccinylase; metal bind	99.03
3ife_A	434	Peptidase T; metallopeptidase, aminopeptidase, hyd	99.03
3io1_A	445	Aminobenzoyl-glutamate utilization protein; peptid	99.03
2pok_A	481	Peptidase, M20/M25/M40 family; M20 family peptidas	98.99
3khx_A	492	Putative dipeptidase sacol1801; DAPE, metallopepti	98.98
1fno_A	417	Peptidase T; metallo peptidase, protease, hydrolas	98.96
3rza_A	396	Tripeptidase; phosphorylase/hydrolase-like, struct	98.9
2zog_A	479	Cytosolic non-specific dipeptidase; metallopeptida	98.89
1z2l_A	423	Allantoate amidohydrolase; ALLC, purine cataboli a	98.89
2qyv_A	487	XAA-His dipeptidase; YP_718209.1, structural genom	98.87
3n5f_A	408	L-carbamoylase, N-carbamoyl-L-amino acid hydrolase	98.84
2v8h_A	474	Beta-alanine synthase; amidohydrolase, alpha and b	98.82
3gb0_A	373	Peptidase T; NP_980509.1, aminopeptidase PEPT, pep	98.81
3dlj_A	485	Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti	98.76
3mru_A	490	Aminoacyl-histidine dipeptidase; metalloprotease,	98.75
1q7l_A	198	Aminoacylase-1; catalysis, enzyme dimerization, si	98.74
1lfw_A	470	PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac	98.44
4h2k_A	269	Succinyl-diaminopimelate desuccinylase; DAPE, MCSG	95.04
3t68_A	268	Succinyl-diaminopimelate desuccinylase; DAPE, csgi	93.26
2fvg_A	340	Endoglucanase; TM1049, structural genomics, joint	92.13

>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A

Probab=99.41  E-value=4.7e-13  Score=103.46  Aligned_cols=80  Identities=23%  Similarity=0.209  Sum_probs=60.4

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC--CCCHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH--ENTAAEKVNY   78 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~--~~nAi~~~~~   78 (114)
                      ++|||.||..|+++++++..    ++++++.   .+|+ ...+.+++||..+++|+++|+++|||.|+  +.|||..+++
T Consensus       130 ~~~EE~~g~~G~~~~~~~~~----~~d~~i~---~e~~-~~~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~  201 (369)
T 2f7v_A          130 SSDEEANDPRCIAAFLARGL----PYDAVLV---AEPT-MSEAVLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMR  201 (369)
T ss_dssp             ESCTTSSSCCHHHHHHTTCC----CCSEEEE---CCCS-TTCBBCCBCCEEEEEEEEECCCC------CTTSCHHHHHHH
T ss_pred             EeCcccCCCcCHHHHHhcCC----CCCEEEE---CCCC-CCcceeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHH
Confidence            47999955689999998632    2677774   4554 35678999999999999999999999997  4999999999


Q ss_pred             HHHHHHHHHH
Q psy14393         79 IMNKFLALRE   88 (114)
Q Consensus        79 ~i~~l~~~~~   88 (114)
                      ++.+|+++..
T Consensus       202 ~i~~l~~~~~  211 (369)
T 2f7v_A          202 WGGKALDHVE  211 (369)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHhhhh
Confidence            9999977654

>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}

Probab=99.34  E-value=1.5e-12  Score=100.76  Aligned_cols=78  Identities=22%  Similarity=0.323  Sum_probs=63.8

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.||..|++++++..     +++++|.--.++|+.   |.+++||..|++|+++|+++|+|.|+ +.|||..++++
T Consensus       136 ~~~EE~~g~~G~~~~~~~~-----~~d~~i~~d~~~p~~---i~~~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~  207 (364)
T 2rb7_A          136 TGDEEIGGMNGAAKALPLI-----RADYVVALDGGNPQQ---VITKEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMED  207 (364)
T ss_dssp             ESCGGGTSTTTHHHHGGGC-----EEEEEEECSSSBTTE---EEEEECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHH
T ss_pred             EeccccCchhhHHHHHhcC-----CCCEEEEccCCcccc---eEEEeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHH
Confidence            4799987778999999853     256666422245643   88999999999999999999999995 69999999999


Q ss_pred             HHHHHHH
Q psy14393         80 MNKFLAL   86 (114)
Q Consensus        80 i~~l~~~   86 (114)
                      +.+|+++
T Consensus       208 i~~l~~~  214 (364)
T 2rb7_A          208 YTRLKTL  214 (364)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHhh
Confidence            9998765

>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}

Probab=99.34  E-value=3.1e-12  Score=100.31  Aligned_cols=81  Identities=19%  Similarity=0.225  Sum_probs=67.3

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.|+ .|++.+++++ +   +++++|.   ++|+ ...|.+++||..|++|+++|+++|||.|. +.|||..++++
T Consensus       175 ~~~EE~g~-~G~~~~~~~~-~---~~d~~i~---~ep~-~~~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~  245 (433)
T 3pfo_A          175 VTEEESTG-NGALSTLMRG-Y---RADACLI---PEPT-GHTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILSAMHL  245 (433)
T ss_dssp             ESCTTTTC-HHHHHHHHTT-C---CCSEEEE---CCCC-SSCEEEEECEEEEEEEEEECCCCBGGGGGGSCCHHHHHHHH
T ss_pred             EecCccCC-hhHHHHHhcC-C---CCCEEEE---eCCC-CCceEEecceEEEEEEEEEcCCCccCCCCcCcCHHHHHHHH
Confidence            47999986 6999998753 2   3678874   4565 34788999999999999999999999996 59999999999


Q ss_pred             HHHHHHHHHHH
Q psy14393         80 MNKFLALREEE   90 (114)
Q Consensus        80 i~~l~~~~~~~   90 (114)
                      +.+|+++..+.
T Consensus       246 i~~l~~l~~~~  256 (433)
T 3pfo_A          246 IRAFEEYTKEL  256 (433)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99998877654

>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.34  E-value=2.9e-13  Score=104.45  Aligned_cols=79  Identities=22%  Similarity=0.276  Sum_probs=64.0

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCCCCCHHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLHENTAAEKVNYIM   80 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~~~nAi~~~~~~i   80 (114)
                      ++|||.+|..|+++++++.  .  ++++++.   .+|+ ...+.+++||..+++|+++|+++|||.|.+.|||..+++++
T Consensus       134 ~~~EE~~g~~G~~~~~~~~--~--~~d~~i~---~ep~-~~~i~~~~~G~~~~~i~~~G~~~Ha~~p~g~nAi~~~~~~i  205 (356)
T 3ct9_A          134 SCEEEVSGKEGIESVLPGL--P--PVSFAIV---GEPT-EMQPAIAEKGLMVLDVTATGKAGHAARDEGDNAIYKVLNDI  205 (356)
T ss_dssp             ECCGGGTCTTTHHHHGGGS--C--CCSEEEE---CCSB-TTCCEEEECCCEEEEEEEECBCCBTTSSCCBCTTGGGHHHH
T ss_pred             EeCcccCCccCHHHHHhhC--C--CCCEEEE---cCCC-CceEEEeeeEEEEEEEEEECCCcccCCCCCCCHHHHHHHHH
Confidence            4799994458999999853  2  2677774   4554 35678999999999999999999999995599999999999


Q ss_pred             HHHHHHH
Q psy14393         81 NKFLALR   87 (114)
Q Consensus        81 ~~l~~~~   87 (114)
                      .+|+++.
T Consensus       206 ~~l~~~~  212 (356)
T 3ct9_A          206 AWFRDYR  212 (356)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhhh
Confidence            9996643

>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1

Probab=99.32  E-value=4.8e-13  Score=104.05  Aligned_cols=83  Identities=18%  Similarity=0.163  Sum_probs=63.9

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCc----ceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEV----FALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEK   75 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~----~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~   75 (114)
                      ++|||.++..|++++++........+++++.   ++|+..    ..+.+++||..+++|+++|+++|+|.|+ +.|||..
T Consensus       134 ~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~---~e~~~~~~~g~~i~~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~  210 (393)
T 1vgy_A          134 TSDEEGDALDGTTKVVDVLKARDELIDYCIV---GEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHT  210 (393)
T ss_dssp             ESCSSSCCTTSHHHHHHHHHHTTCCEEEEEE---CCCCBSSSTTSEEECEECEEEEEEEEEECBCEETTCGGGCBCHHHH
T ss_pred             EeccccCCcCCHHHHHHHHHhcCcCCCEEEE---eCCCCcccCCceeEEeeeeEEEEEEEEEccCcccCCCccCCCHHHH
Confidence            4799997778999998742222234777763   334311    1367899999999999999999999996 5999999


Q ss_pred             HHHHHHHHHHH
Q psy14393         76 VNYIMNKFLAL   86 (114)
Q Consensus        76 ~~~~i~~l~~~   86 (114)
                      +++++.+|...
T Consensus       211 ~a~~i~~l~~~  221 (393)
T 1vgy_A          211 FAPALLELTQE  221 (393)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHhhcc
Confidence            99999998664

>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}

Probab=99.30  E-value=2.2e-12  Score=101.00  Aligned_cols=82  Identities=17%  Similarity=0.158  Sum_probs=67.5

Q ss_pred             CCccCcCcccchH-HhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcC-CCC-CCCHHHHHH
Q psy14393          1 MLDEEIGGSQGMS-LFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGS-LLH-ENTAAEKVN   77 (114)
Q Consensus         1 ~~DEE~Gg~~G~~-~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS-~P~-~~nAi~~~~   77 (114)
                      ++|||.|+..|++ +|++.+.+++  +++++   +..|+....+..+++|..|++|+++|+++|+| .|+ +.|||..++
T Consensus       125 ~~~EE~~~~~Ga~~~~~~~g~~~~--~d~~~---~~h~~~~~~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~  199 (394)
T 3ram_A          125 CPAEEGGENGSAKASYVKAGVIDQ--IDIAL---MIHPGNETYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMI  199 (394)
T ss_dssp             CCCTTCCTTCCHHHHHHHHTGGGG--CSEEE---CCEEESSBBCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHH
T ss_pred             ECCccCCCCCchHHHHHHcCCccc--CCEEE---EECCccccCCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHH
Confidence            5899987447999 9998777765  67777   34454334677899999999999999999999 996 599999999


Q ss_pred             HHHHHHHHHH
Q psy14393         78 YIMNKFLALR   87 (114)
Q Consensus        78 ~~i~~l~~~~   87 (114)
                      +++..|+.++
T Consensus       200 ~~i~~l~~l~  209 (394)
T 3ram_A          200 SYFNGVAQLR  209 (394)
T ss_dssp             HHHHHHHHHG
T ss_pred             HHHHHHHHHH
Confidence            9999997764

>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A

Probab=99.26  E-value=1.7e-12  Score=99.44  Aligned_cols=83  Identities=18%  Similarity=0.230  Sum_probs=56.0

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCc----ceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEV----FALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEK   75 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~----~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~   75 (114)
                      ++|||.|+..|++.+++....+...+++++.   ++|+..    ..+.+++||..+++++++|+++|+|.|+ +.||+..
T Consensus       131 ~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~---~e~~~~~~~g~~i~~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~  207 (377)
T 3isz_A          131 TSDEEATAKDGTIHVVETLMARDEKITYCMV---GEPSSAKNLGDVVKNGRRGSITGNLYIQGIQGHVAYPHLAENPIHK  207 (377)
T ss_dssp             ESCSSSCCSSSHHHHHHHHHHTTCCCCEEEE---CCCCBSSSTTSEEEEEECEEEEEEEEEECC-------CGGGCHHHH
T ss_pred             EcccccCccccHHHHHHHHHhcCCCCCEEEE---cCCCCcccCCceEEEEcceEEEEEEEEEccccccCCCccCcCHHHH
Confidence            4799998757999988742222233677763   233211    1367899999999999999999999996 4999999


Q ss_pred             HHHHHHHHHHH
Q psy14393         76 VNYIMNKFLAL   86 (114)
Q Consensus        76 ~~~~i~~l~~~   86 (114)
                      +++++.+|++.
T Consensus       208 ~~~~i~~l~~~  218 (377)
T 3isz_A          208 AALFLQELTTY  218 (377)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhc
Confidence            99999998654

>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}

Probab=99.25  E-value=4.3e-12  Score=97.65  Aligned_cols=82  Identities=20%  Similarity=0.193  Sum_probs=66.1

Q ss_pred             CCccCcCcc-cchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHH
Q psy14393          1 MLDEEIGGS-QGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNY   78 (114)
Q Consensus         1 ~~DEE~Gg~-~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~   78 (114)
                      ++|||+|+. .|++++++.. ....+++++|.   .+|+ ...+.+++||..|++++++|+++|+|.|+ +.|||..+++
T Consensus       133 ~~~EE~g~~~~G~~~~~~~~-~~~~~~~~~i~---~ep~-~~~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~  207 (369)
T 3tx8_A          133 YECEEVADHLNGLGHIRDEH-PEWLAADLALL---GEPT-GGWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSP  207 (369)
T ss_dssp             ECCCSSCTTSCHHHHHHHHC-GGGGCCSEEEE---CCCC-TTCEEESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHH
T ss_pred             EeccccCcccccHHHHHHhc-ccccCCCEEEE---eCCC-CCceeeecceEEEEEEEEeeeccccCCCCcCcCHHHHHHH
Confidence            479999853 5999999853 22234678874   4564 46788999999999999999999999996 5999999999


Q ss_pred             HHHHHHHHH
Q psy14393         79 IMNKFLALR   87 (114)
Q Consensus        79 ~i~~l~~~~   87 (114)
                      ++.+|+++.
T Consensus       208 ~i~~l~~~~  216 (369)
T 3tx8_A          208 IISKVAAYK  216 (369)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhhc
Confidence            999997654

>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A

Probab=99.20  E-value=1.5e-11  Score=96.61  Aligned_cols=83  Identities=16%  Similarity=0.039  Sum_probs=55.8

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEec-C-cccCCCc--ceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDE-G-IASPTEV--FALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEK   75 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idE-G-~~~~~~~--~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~   75 (114)
                      ++||| |+ .|++++++++.+++  +++++.. . .++|+..  ..+..++||..+++|+++|+++|||.|+ +.|||..
T Consensus       148 ~~~EE-g~-~G~~~~~~~g~~~~--~d~~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~  223 (418)
T 1xmb_A          148 QPAEE-GL-SGAKKMREEGALKN--VEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVA  223 (418)
T ss_dssp             ECCTT-TT-CHHHHHHHTTTTTT--EEEEEEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHH
T ss_pred             ecccc-cc-ccHHHHHHcCCcCC--CCEEEEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHH
Confidence            47999 64 79999998765543  5666531 0 1244432  2456789999999999999999999996 5999999


Q ss_pred             HHHHHHHHHHHH
Q psy14393         76 VNYIMNKFLALR   87 (114)
Q Consensus        76 ~~~~i~~l~~~~   87 (114)
                      +++++.+|+++.
T Consensus       224 ~a~~i~~l~~~~  235 (418)
T 1xmb_A          224 ASSIVLSLQQLV  235 (418)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHH
Confidence            999999997653

>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1

Probab=99.11  E-value=1.1e-10  Score=91.34  Aligned_cols=83  Identities=16%  Similarity=0.199  Sum_probs=51.2

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCc-cee--eec--ccceEEEEEEEeccCCCcCCCC-CCCHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEV-FAL--FNG--ERTIWQMKIHCPGTPGHGSLLH-ENTAAE   74 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~-~~i--~~a--eKG~~~~~v~v~G~~gHsS~P~-~~nAi~   74 (114)
                      ++|||. + .|++++++++.++.  +++++.- -.+|+.. ..+  ..+  +||..|++|+++|+++|||.|+ +.|||.
T Consensus       154 ~~~EE~-~-~G~~~~~~~g~~~~--~d~~i~~-h~ep~~~~g~v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~  228 (404)
T 1ysj_A          154 QPAEEI-A-AGARKVLEAGVLNG--VSAIFGM-HNKPDLPVGTIGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIA  228 (404)
T ss_dssp             ESCTTT-T-CHHHHHHHTTTTTT--EEEEEEE-EEETTSCTTEEEECSEEEECCEEEEEEEEECC--------CCCCHHH
T ss_pred             eccccc-c-hhHHHHHhcCCCcC--CCEEEEE-ecCCCCCCceEEeccChhhcccceEEEEEEccCccccCcccCCCHHH
Confidence            479998 4 69999998765554  5666640 0123211 122  223  7899999999999999999996 599999


Q ss_pred             HHHHHHHHHHHHHH
Q psy14393         75 KVNYIMNKFLALRE   88 (114)
Q Consensus        75 ~~~~~i~~l~~~~~   88 (114)
                      .+++++.+|+++..
T Consensus       229 ~~~~~i~~l~~~~~  242 (404)
T 1ysj_A          229 AAGQIISGLQSVVS  242 (404)
T ss_dssp             HHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999976543

>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1

Probab=99.10  E-value=4.1e-11  Score=93.08  Aligned_cols=80  Identities=19%  Similarity=0.184  Sum_probs=63.0

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCC--cceeeecccceEEEEEEEeccCCCcC-CCC-CCCHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTE--VFALFNGERTIWQMKIHCPGTPGHGS-LLH-ENTAAEKV   76 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~--~~~i~~aeKG~~~~~v~v~G~~gHsS-~P~-~~nAi~~~   76 (114)
                      ++|||.|+ .|++++++....   ++++++.   .+|+.  ...+.+++||..+++|+++|+++||| .|. +.|||..+
T Consensus       150 ~~~EE~g~-~G~~~~~~~~~~---~~d~~i~---~e~~~~~~~~i~~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~  222 (393)
T 1cg2_A          150 NTDEEKGS-FGSRDLIQEEAK---LADYVLS---FEPTSAGDEKLSLGTSGIAYVQVNITGKASHAGAAPELGVNALVEA  222 (393)
T ss_dssp             ESCGGGTT-TTTHHHHHHHHH---HCSEEEE---CCCEETTSCEEESEECEEEEEEEEEECBCEETTSCGGGSBCHHHHH
T ss_pred             EcccccCC-ccHHHHHHHHhh---cCCEEEE---eCCCCCCCCcEEEeeeeeEEEEEEEEeeecccCCCcccCcCHHHHH
Confidence            47999975 799999985222   2677774   34432  34678999999999999999999995 786 69999999


Q ss_pred             HHHHHHHHHHH
Q psy14393         77 NYIMNKFLALR   87 (114)
Q Consensus        77 ~~~i~~l~~~~   87 (114)
                      ++++.+|+.+.
T Consensus       223 ~~~i~~l~~~~  233 (393)
T 1cg2_A          223 SDLVLRTMNID  233 (393)
T ss_dssp             HHHHHHHGGGC
T ss_pred             HHHHHHHHhhh
Confidence            99999987654

>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}

Probab=99.03  E-value=1.3e-10  Score=92.71  Aligned_cols=83  Identities=11%  Similarity=0.025  Sum_probs=62.1

Q ss_pred             CCccCcCcccchHHhhccc--ccccCCeeEEEe-cCcccCCCcceeeecccceEEEEEEE--eccCCCcCCCCC--CCHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTD--AFKKMNVGCALD-EGIASPTEVFALFNGERTIWQMKIHC--PGTPGHGSLLHE--NTAA   73 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~--~~~~~~~~~~id-EG~~~~~~~~~i~~aeKG~~~~~v~v--~G~~gHsS~P~~--~nAi   73 (114)
                      ++|||+|+ .|++++++..  .++.  +++++. |+...+.....+.+++||.+++++++  +|+++|||+|.+  .|||
T Consensus       160 ~~~EE~g~-~g~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~~i~~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai  236 (472)
T 3pfe_A          160 EACEESGS-YDLPFYIELLKERIGK--PSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVELINEGVHSGSASGIVADSF  236 (472)
T ss_dssp             ESCGGGTS-TTHHHHHHHHHHHHCC--CSEEEEECCBCSCSSSCEEEEEECEEEEEEEEEESCSSCBCHHHHTTTSCCHH
T ss_pred             EeCCCCCC-hhHHHHHHHhHhhccC--CCEEEEeCCCcCCCCCeeEEEeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHH
Confidence            47999986 7999999853  2333  555553 22222223457889999999988554  899999999975  4999


Q ss_pred             HHHHHHHHHHHHH
Q psy14393         74 EKVNYIMNKFLAL   86 (114)
Q Consensus        74 ~~~~~~i~~l~~~   86 (114)
                      ..++++|.+|+..
T Consensus       237 ~~~~~~i~~l~~~  249 (472)
T 3pfe_A          237 RVARQLISRIEDE  249 (472)
T ss_dssp             HHHHHHHHHHBCT
T ss_pred             HHHHHHHHHhhCc
Confidence            9999999999876

>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}

Probab=99.03  E-value=1.8e-10  Score=90.81  Aligned_cols=77  Identities=21%  Similarity=0.113  Sum_probs=59.3

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcC-CCC-CCCHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGS-LLH-ENTAAEKVNY   78 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS-~P~-~~nAi~~~~~   78 (114)
                      ++|||+|  .|+++|... .++   +++++.   ..|.....|.+++||..|++|+++|+++||+ .|. +.|||..+++
T Consensus       197 ~~~EE~g--~Ga~~~~~~-~~~---~d~~~~---~d~~~~g~i~~~~~G~~~~~i~v~G~~~Hag~~P~~g~nAi~~aa~  267 (434)
T 3ife_A          197 TPDEEIG--RGPAHFDVE-AFG---ASFAYM---MDGGPLGGLEYESFNAAGAKLTFNGTNTHPGTAKNKMRNATKLAME  267 (434)
T ss_dssp             ESCGGGT--CTGGGCCHH-HHC---CSEEEE---CCCCSTTEEECCBCEEEEEEEEEECBCCCGGGCTTTCBCHHHHHHH
T ss_pred             ECCcccC--hHHHHhhhh-hcC---CCEEEE---ecCCCCCceeecCCCeEEEEEEEEEEecCCCCCcccchhHHHHHHH
Confidence            4799987  699987542 343   566653   2232224688999999999999999999976 785 5999999999


Q ss_pred             HHHHHHHH
Q psy14393         79 IMNKFLAL   86 (114)
Q Consensus        79 ~i~~l~~~   86 (114)
                      ++.+|+++
T Consensus       268 ~i~~l~~~  275 (434)
T 3ife_A          268 FNGHLPVE  275 (434)
T ss_dssp             HHHTSCTT
T ss_pred             HHHhcccc
Confidence            99998665

>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}

Probab=99.03  E-value=3.8e-10  Score=89.52  Aligned_cols=80  Identities=14%  Similarity=0.087  Sum_probs=61.6

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEe-cCcc-cCCCcceeeecccc---eEEEEEEEeccCCCc-CCCC-CCCHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALD-EGIA-SPTEVFALFNGERT---IWQMKIHCPGTPGHG-SLLH-ENTAA   73 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~id-EG~~-~~~~~~~i~~aeKG---~~~~~v~v~G~~gHs-S~P~-~~nAi   73 (114)
                      ++|||. + .|+++|++++.+++  +++++. +..+ .|  ...+.+++||   ..|++|+++|+++|+ |.|+ +.|||
T Consensus       181 ~p~EE~-~-~Ga~~~i~~g~~~~--~d~~~~~h~~~~~~--~g~i~~~~~g~~a~~~~~i~v~Gk~~HaGs~P~~g~nAi  254 (445)
T 3io1_A          181 QPAEEG-T-RGARAMVAAGVVDD--VDYFTAIHIGTGVP--AGTVVCGGDNFMATTKFDVQFSGVAAHAGGKPEDGRNAL  254 (445)
T ss_dssp             ESCTTT-T-CHHHHHHHTTTTTT--CSEEEEEEEEEEEE--TTBEESCCCCBCEEEEEEEEEECCCSSTTCCGGGCCCHH
T ss_pred             eccccc-c-chHHHHHHcCCccc--cceeEEEeccCCCC--CCeEEEecCCeeEEEEEEEEEEeecCCCCCCCcCCcCHH
Confidence            479994 3 69999999877765  566652 1111 12  2357788888   479999999999997 8996 59999


Q ss_pred             HHHHHHHHHHHHH
Q psy14393         74 EKVNYIMNKFLAL   86 (114)
Q Consensus        74 ~~~~~~i~~l~~~   86 (114)
                      ..+++++.+|+.+
T Consensus       255 ~~aa~~i~~l~~l  267 (445)
T 3io1_A          255 LAAAQAALGLHAI  267 (445)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999776

>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}

Probab=98.99  E-value=5e-10  Score=89.26  Aligned_cols=83  Identities=12%  Similarity=0.069  Sum_probs=62.7

Q ss_pred             CCccCcCcccchHHhhccc--ccccCCeeEEEecCcccCC-CcceeeecccceEEEEEEEeccC--CCcCCCC-CCCHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTD--AFKKMNVGCALDEGIASPT-EVFALFNGERTIWQMKIHCPGTP--GHGSLLH-ENTAAE   74 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~--~~~~~~~~~~idEG~~~~~-~~~~i~~aeKG~~~~~v~v~G~~--gHsS~P~-~~nAi~   74 (114)
                      ++|||+|+ .|++.++++.  .+++  ++++++.-.+.+. ....+.+++||.++++|+++|++  +|||.|. +.|||.
T Consensus       178 ~~~EE~g~-~g~~~~~~~~~~~~~~--~d~~i~~~~~~~~~~~~~i~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~  254 (481)
T 2pok_A          178 EGAEESAS-TDLDKYLEKHADKLRG--ADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPW  254 (481)
T ss_dssp             ESCGGGTT-TTHHHHHHHHHHHHTT--CSEEECSCCBBCTTSCEEEECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHH
T ss_pred             ecccccCc-hhHHHHHHHhHhhccC--CCEEEECCCCccCCCCeeEEEecceeEEEEEEEecCCCCccccCCCCCCCHHH
Confidence            47999985 6998888742  1332  6778753111111 12468899999999999999999  8999996 599999


Q ss_pred             HHHHHHHHHHHH
Q psy14393         75 KVNYIMNKFLAL   86 (114)
Q Consensus        75 ~~~~~i~~l~~~   86 (114)
                      .+++++.+|++.
T Consensus       255 ~~a~~i~~l~~~  266 (481)
T 2pok_A          255 YLLQALQSLRAA  266 (481)
T ss_dssp             HHHHHHHHTBCT
T ss_pred             HHHHHHHHhhCC
Confidence            999999998764

>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A

Probab=98.98  E-value=2.7e-10  Score=91.58  Aligned_cols=40  Identities=13%  Similarity=-0.020  Sum_probs=32.5

Q ss_pred             ecccceE-----EEEEEEeccCCCcCCCC-CCCHHHHHHHHHHHHH
Q psy14393         45 NGERTIW-----QMKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKFL   84 (114)
Q Consensus        45 ~aeKG~~-----~~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l~   84 (114)
                      .++||.+     |++|+++|+++|+|.|+ +.|||..++++|.+|.
T Consensus       269 ~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~  314 (492)
T 3khx_A          269 NHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLN  314 (492)
T ss_dssp             TTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSC
T ss_pred             cCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcC
Confidence            4669999     99999999999999996 6999999999998886

>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A

Probab=98.96  E-value=3.4e-10  Score=88.54  Aligned_cols=78  Identities=21%  Similarity=0.073  Sum_probs=59.1

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcC-CCC-CCCHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGS-LLH-ENTAAEKVNY   78 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS-~P~-~~nAi~~~~~   78 (114)
                      ++|||+|  .|+++++++ .++   +++++.- .++|.  ..+.+++||..+++|+++|+++|+| .|. +.|||..+++
T Consensus       170 ~~~EE~g--~Ga~~~~~~-~~~---~d~~i~~-d~~~~--g~i~~~~~g~~~~~i~~~G~~~Hs~~~p~~g~nAi~~~a~  240 (417)
T 1fno_A          170 TPDEEVG--KGAKHFDVE-AFG---AQWAYTV-DGGGV--GELEFENFNAASVNIKIVGNNVHPGTAKGVMVNALSLAAR  240 (417)
T ss_dssp             ESCGGGT--CTTTTCCHH-HHC---CSEEEEC-CCCST--TBEECCBCEEEEEEEEEECBCCCGGGCTTTCBCHHHHHHH
T ss_pred             EeccccC--CChhhhchh-hcC---CCEEEEe-CCCCc--CeeEEecCCceeEEEEEEeeccCCCCCccccCCHHHHHHH
Confidence            4799986  699888753 232   4555531 12243  3578899999999999999999999 575 5999999999


Q ss_pred             HHHHHHHHH
Q psy14393         79 IMNKFLALR   87 (114)
Q Consensus        79 ~i~~l~~~~   87 (114)
                      ++.+|+++.
T Consensus       241 ~i~~l~~~~  249 (417)
T 1fno_A          241 IHAEVPADE  249 (417)
T ss_dssp             HHHTSCTTS
T ss_pred             HHHhhhccC
Confidence            999886653

>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}

Probab=98.90  E-value=1.9e-09  Score=83.90  Aligned_cols=78  Identities=18%  Similarity=0.194  Sum_probs=58.7

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYI   79 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~   79 (114)
                      ++|||.|+ .|+++|.+. .++. .+.++++.+   . ....|.++++|..+++++++|+++|+|.|+ +.|||..++++
T Consensus       159 ~~~EE~g~-~Ga~~~~~~-~~~~-~~~~~~~~~---~-~~g~i~~~~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~  231 (396)
T 3rza_A          159 TVGEESGL-IGAKELNSE-LLDA-DFGYAIDAS---A-DVGTTVVGAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKA  231 (396)
T ss_dssp             ESCGGGTS-HHHHHCCGG-GCCC-SEEEEEEES---S-CTTCEEEEECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHH
T ss_pred             Eccccccc-HhHhhhchh-hccc-ceEEEEecC---C-CcceEEEcCCceEEEEEEEEeEecCCCCccccccHHHHHHHH
Confidence            47999974 799998764 2321 133444311   1 124678999999999999999999999996 59999999999


Q ss_pred             HHHHHH
Q psy14393         80 MNKFLA   85 (114)
Q Consensus        80 i~~l~~   85 (114)
                      +.+|+.
T Consensus       232 i~~l~~  237 (396)
T 3rza_A          232 ISRMKL  237 (396)
T ss_dssp             HHHSCC
T ss_pred             HHhccc
Confidence            998854

>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*

Probab=98.89  E-value=5.1e-10  Score=88.79  Aligned_cols=82  Identities=17%  Similarity=0.152  Sum_probs=60.4

Q ss_pred             CCccCcCcccchHHhhccc---ccccCCeeEEEe-cCcccCCCcceeeecccceEEEEEEEeccC--CCcCCCCCCCHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTD---AFKKMNVGCALD-EGIASPTEVFALFNGERTIWQMKIHCPGTP--GHGSLLHENTAAE   74 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~---~~~~~~~~~~id-EG~~~~~~~~~i~~aeKG~~~~~v~v~G~~--gHsS~P~~~nAi~   74 (114)
                      ++|||.|+ .|+++|+++.   .+.  ++++++. |++....+...+.+++||..+++|+++|++  +|||+| +.||+.
T Consensus       167 ~~~EE~g~-~Ga~~~~~~~~~~~~~--~~d~~i~~e~~~~~~~~~~i~~~~~G~~~~~i~v~G~~~~~Hs~~~-g~~ai~  242 (479)
T 2zog_A          167 EGMEESGS-EGLDELIFAQKDKFFK--DVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVY-GGSVHE  242 (479)
T ss_dssp             ESCGGGTC-TTHHHHHHHTTTTTTT--TCCEEEECCCBCSSSSSCEEEEEECEEEEEEEEEECCSSCEEHHHH-TTTSCC
T ss_pred             ecccccCC-ccHHHHHHhhhhhhcc--cCCEEEEeCCCcCCCCCeEEEEecceEEEEEEEEEeCCCCCccCCC-CCCccC
Confidence            47999975 7999999853   222  2566653 322111124568899999999999999999  999996 688888


Q ss_pred             HHHHHHHHHHHH
Q psy14393         75 KVNYIMNKFLAL   86 (114)
Q Consensus        75 ~~~~~i~~l~~~   86 (114)
                      .+++++..|.++
T Consensus       243 ~~~~~i~~l~~l  254 (479)
T 2zog_A          243 AMTDLISLMGCL  254 (479)
T ss_dssp             HHHHHHHHHTTS
T ss_pred             HHHHHHHHHHhc
Confidence            888888887654

>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A

Probab=98.89  E-value=1.9e-09  Score=84.28  Aligned_cols=61  Identities=13%  Similarity=0.120  Sum_probs=47.9

Q ss_pred             ceeeecccceEEEEEEEeccCCCcC-CCC--CCCHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCccce
Q psy14393         41 FALFNGERTIWQMKIHCPGTPGHGS-LLH--ENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDV  105 (114)
Q Consensus        41 ~~i~~aeKG~~~~~v~v~G~~gHsS-~P~--~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~  105 (114)
                      ..+..++||..+++|+++|+++||| .|+  +.|||..+++++..|+++..+. +   ...+.++|.+
T Consensus       206 ~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~~-~---~~~~~~vg~i  269 (423)
T 1z2l_A          206 IGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRM-G---DPLVLTFGKV  269 (423)
T ss_dssp             EEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHHH-C---TTCEEECCCE
T ss_pred             eEEEeeEecceEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHhc-C---CCceEEEEEE
Confidence            4567899999999999999999999 684  5999999999999997765431 1   1334555555

>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}

Probab=98.87  E-value=5.4e-09  Score=83.47  Aligned_cols=77  Identities=12%  Similarity=0.103  Sum_probs=55.8

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeee------------------cccceEEEEEEEec-cC
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFN------------------GERTIWQMKIHCPG-TP   61 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~------------------aeKG~~~~~v~v~G-~~   61 (114)
                      ++|||+|+ .|+++++++. ++   +++++.   ..|.....+.+                  +++| .+++|+++| ++
T Consensus       143 ~~~EE~g~-~Ga~~~~~~~-~~---~d~~~~---~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~  213 (487)
T 2qyv_A          143 TMTEERGM-EGAIGLRPNW-LR---SEILIN---TDTEENGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRG  213 (487)
T ss_dssp             ESCTTTTC-HHHHTCCSSC-CC---CSEEEE---CCCCCTTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCC
T ss_pred             EeccccCC-HHHHHHHHhc-cC---CCEEEE---EccCCCCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCC
Confidence            47999874 7999999753 43   556653   12221123444                  4555 889999999 89


Q ss_pred             CCcCCCC--C-CCHHHHHHHHHHHHHHH
Q psy14393         62 GHGSLLH--E-NTAAEKVNYIMNKFLAL   86 (114)
Q Consensus        62 gHsS~P~--~-~nAi~~~~~~i~~l~~~   86 (114)
                      +|||.|+  + .|||..+++++.+|+.+
T Consensus       214 ~Hsg~~~~~g~~nAi~~~~~~i~~l~~~  241 (487)
T 2qyv_A          214 GHSGVDIHTGRANAIKVLLRFLAELQQN  241 (487)
T ss_dssp             CBTTTTTTSCCCCHHHHHHHHHHHHHHH
T ss_pred             ccCCcccccCCCCHHHHHHHHHHHHhhc
Confidence            9999984  4 79999999999998665

>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}

Probab=98.84  E-value=1.4e-08  Score=79.28  Aligned_cols=48  Identities=10%  Similarity=0.074  Sum_probs=42.9

Q ss_pred             cceeeecccceEEEEEEEeccCCCc-CCCC--CCCHHHHHHHHHHHHHHHH
Q psy14393         40 VFALFNGERTIWQMKIHCPGTPGHG-SLLH--ENTAAEKVNYIMNKFLALR   87 (114)
Q Consensus        40 ~~~i~~aeKG~~~~~v~v~G~~gHs-S~P~--~~nAi~~~~~~i~~l~~~~   87 (114)
                      ...+..++||..|++++++|+++|+ |.|+  +.|||..+++++.+|+++.
T Consensus       202 ~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~  252 (408)
T 3n5f_A          202 PVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEA  252 (408)
T ss_dssp             SEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHH
Confidence            3567789999999999999999999 7994  4999999999999998775

>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A

Probab=98.82  E-value=8.5e-09  Score=82.36  Aligned_cols=60  Identities=13%  Similarity=0.137  Sum_probs=47.7

Q ss_pred             ceeeecccceEEEEEEEeccCCCcCC-CC--CCCHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCcccee
Q psy14393         41 FALFNGERTIWQMKIHCPGTPGHGSL-LH--ENTAAEKVNYIMNKFLALREEEKNKLKANKNLTIGDVT  106 (114)
Q Consensus        41 ~~i~~aeKG~~~~~v~v~G~~gHsS~-P~--~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~  106 (114)
                      ..+..++||..|++|+++|+++|||. |+  +.|||..+++++.+|+++..+.      ..+.++|.|.
T Consensus       239 ~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~------~~t~~vg~i~  301 (474)
T 2v8h_A          239 IGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH------NGLFTCGIID  301 (474)
T ss_dssp             EEEEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT------TCEEECCCEE
T ss_pred             ceeEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc------CCEEEEEEEE
Confidence            45678999999999999999999995 84  5999999999999997754431      3355555543

>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}

Probab=98.81  E-value=4.1e-09  Score=81.01  Aligned_cols=77  Identities=13%  Similarity=0.067  Sum_probs=57.8

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCC-CcceeeecccceEEEEEEEeccCCCcC-CCC-CCCHHHHHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPT-EVFALFNGERTIWQMKIHCPGTPGHGS-LLH-ENTAAEKVN   77 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~-~~~~i~~aeKG~~~~~v~v~G~~gHsS-~P~-~~nAi~~~~   77 (114)
                      ++|||.|+ .|++++.+. .++   +++++.   .+|. ....|.++++|..+++++++|+++|+| .|+ +.|||..++
T Consensus       138 ~~~EE~g~-~Ga~~~~~~-~~~---~~~~~~---~~~~~~~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~  209 (373)
T 3gb0_A          138 TVGEESGL-VGAKALDRE-RIT---AKYGYA---LDSDGKVGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAA  209 (373)
T ss_dssp             ESCGGGTS-HHHHHSCGG-GCC---CSEEEE---EEECSCTTEEEEEECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHH
T ss_pred             EeccccCc-hhhhhhCHH-hcC---CCEEEE---EcCCCCCCeEEEcCCCcEEEEEEEEeEecCCCCChhhCcCHHHHHH
Confidence            47999974 799998653 232   344432   1121 124678999999999999999999999 796 599999999


Q ss_pred             HHHHHHHH
Q psy14393         78 YIMNKFLA   85 (114)
Q Consensus        78 ~~i~~l~~   85 (114)
                      +++.+|+.
T Consensus       210 ~~i~~l~~  217 (373)
T 3gb0_A          210 KAIAKMPL  217 (373)
T ss_dssp             HHHTTSCC
T ss_pred             HHHHhccc
Confidence            99988753

>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}

Probab=98.76  E-value=5.5e-09  Score=83.48  Aligned_cols=79  Identities=15%  Similarity=0.100  Sum_probs=55.1

Q ss_pred             CCccCcCcccchHHhhcccc---cccCCeeEEEecCcccCC----CcceeeecccceEEEEEEEeccCC--CcCCCCCCC
Q psy14393          1 MLDEEIGGSQGMSLFVTTDA---FKKMNVGCALDEGIASPT----EVFALFNGERTIWQMKIHCPGTPG--HGSLLHENT   71 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~---~~~~~~~~~idEG~~~~~----~~~~i~~aeKG~~~~~v~v~G~~g--HsS~P~~~n   71 (114)
                      ++|||+|+ .|+++++++..   +++  +++++.   .+|.    ....+.+++||..+++|+++|+++  |||+ .+.|
T Consensus       174 ~~~EE~g~-~g~~~~~~~~~~~~~~~--~d~~~~---~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~~~H~~~-~g~~  246 (485)
T 3dlj_A          174 EGMEEAGS-VALEELVEKEKDRFFSG--VDYIVI---SDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGT-FGGI  246 (485)
T ss_dssp             ESCGGGTT-TTHHHHHHHHTTTTSTT--CCEEEE---CCCBCCC--CCEEEEEECEEEEEEEEEESCSSCEETTT-STTS
T ss_pred             EcccccCC-ccHHHHHHhhhhhcccC--CCEEEE---cCCCccCCCCeeEEEeccceEEEEEEEEECCCCCcCCC-CCcc
Confidence            47999985 69999998632   333  677764   2332    234678899999999999999999  9998 4455


Q ss_pred             HHHHHHHHHHHHHHH
Q psy14393         72 AAEKVNYIMNKFLAL   86 (114)
Q Consensus        72 Ai~~~~~~i~~l~~~   86 (114)
                      |+..+.+++..|..+
T Consensus       247 a~~~~~~l~~~l~~l  261 (485)
T 3dlj_A          247 LHEPMADLVALLGSL  261 (485)
T ss_dssp             SCCHHHHHHHHHTTS
T ss_pred             ccCHHHHHHHHHHhh
Confidence            555555555555443

>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}

Probab=98.75  E-value=1.8e-08  Score=80.96  Aligned_cols=79  Identities=16%  Similarity=0.133  Sum_probs=56.2

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEE--ecC----------cccCCCcce----eeecccceEEEEEEEec-cCCC
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCAL--DEG----------IASPTEVFA----LFNGERTIWQMKIHCPG-TPGH   63 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~i--dEG----------~~~~~~~~~----i~~aeKG~~~~~v~v~G-~~gH   63 (114)
                      ++|||+| ..|+++|++. .++   +++++  |-+          +++|+ ...    ...++||..+++++++| ++||
T Consensus       146 ~~~EE~g-~~Ga~~~~~~-~~~---~~~~~~~d~~~~g~~~~g~~~g~~~-~~~~~~~~~~~~~g~~~~~i~v~G~~~gH  219 (490)
T 3mru_A          146 TIDEEAG-MTGAFGLEAG-WLK---GDILLNTDSEQEGEVYMGCAGGIDG-AMTFDITRDAIPAGFITRQLTLKGLKGGH  219 (490)
T ss_dssp             ESCSSST-TGGGGTCCSS-SCC---SSEEEECCCCCTTCCEEEECEEEEE-EEEEECCEECCCTTEEEEEEEEECCCCEE
T ss_pred             Ecccccc-cHhHHHhhhc-ccC---CCEEEEcCCCCCCeEEEecCCccce-EEEeeeeeeccCCCceEEEEEEECCCCcc
Confidence            4799997 4799999874 333   34433  210          01121 111    14689999999999999 9999


Q ss_pred             cCC-CC-CC-CHHHHHHHHHHHHHH
Q psy14393         64 GSL-LH-EN-TAAEKVNYIMNKFLA   85 (114)
Q Consensus        64 sS~-P~-~~-nAi~~~~~~i~~l~~   85 (114)
                      ||+ |+ +. |||..+++++.+|++
T Consensus       220 s~~~p~~g~~nai~~~~~~l~~l~~  244 (490)
T 3mru_A          220 SGCDIHTGRGNANKLIGRFLAGHAQ  244 (490)
T ss_dssp             TTTSSSSCCCCHHHHHHHHHHHHTT
T ss_pred             cccccccCCcCHHHHHHHHHHHHHh
Confidence            997 64 56 999999999998864

>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4

Probab=98.74  E-value=1.5e-09  Score=77.66  Aligned_cols=55  Identities=49%  Similarity=0.932  Sum_probs=44.9

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEE
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKI   55 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v   55 (114)
                      ++|||+|+..|+++++++..+....++++||+|+++|+....|+++|||.+|++|
T Consensus       144 ~~~EE~g~~~Ga~~~~~~~~~~~~~~~~~id~g~~ept~~~~v~~~~kG~~~~~v  198 (198)
T 1q7l_A          144 VPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRV  198 (198)
T ss_dssp             ESCGGGTSTTTHHHHTTSHHHHTTCEEEEEECCCCCSSSSEEEEECCSSCGGGCC
T ss_pred             EcccccCccccHHHHHHhHHhccCCcCEEEecCccCCCCCceEEEEccEEEEEEC
Confidence            4799998778999999864333334899999999999865789999999999864

>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1

Probab=98.44  E-value=1.1e-07  Score=75.16  Aligned_cols=39  Identities=13%  Similarity=0.174  Sum_probs=35.0

Q ss_pred             cccceE-----EEEEEEeccCCCcCCCC-CCCHHHHHHHHHHHHH
Q psy14393         46 GERTIW-----QMKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKFL   84 (114)
Q Consensus        46 aeKG~~-----~~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l~   84 (114)
                      +.||.+     |++|+++|+++|+|.|+ +.|||..+++++.+|.
T Consensus       247 ~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~  291 (470)
T 1lfw_A          247 ELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYA  291 (470)
T ss_dssp             TCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSC
T ss_pred             ccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCC
Confidence            458887     99999999999999996 5999999999998874

>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}

Probab=95.04  E-value=0.0097  Score=43.75  Aligned_cols=47  Identities=21%  Similarity=0.200  Sum_probs=29.6

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCc----ceeeecccce
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEV----FALFNGERTI   50 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~----~~i~~aeKG~   50 (114)
                      ++|||.|+..|++++++.......+++++|.   .+|+..    ..+.+++||.
T Consensus       134 ~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~---~Ept~~~~~~~~i~~g~~G~  184 (269)
T 4h2k_A          134 TSDEEATAKDGTIHVVETLMARDEKITYCMV---GEPSSAKNLGDVVKNGRRGG  184 (269)
T ss_dssp             ESCSSSCCTTSHHHHHHHHHHTTCCCCEEEE---CCCCBSSSTTSEEECSCTTC
T ss_pred             EeccccCcccCHHHHHHHHHhcCCCCCEEEE---ECCCCCCcCCceeEEecccc
Confidence            4799998756999998731111234788884   566521    1366777776

>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A

Probab=93.26  E-value=0.046  Score=39.99  Aligned_cols=47  Identities=21%  Similarity=0.099  Sum_probs=29.3

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCc----ceeeecccce
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEV----FALFNGERTI   50 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~----~~i~~aeKG~   50 (114)
                      ++|||.|+..|++++++.......+++++|.   .+|+..    ..+.++.||.
T Consensus       134 ~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~---~ept~~~~~~~~i~~g~~G~  184 (268)
T 3t68_A          134 TSDEEGPFINGTVRVVETLMARNELIDMCIV---GEPSSTLAVGDVVKNGRRGG  184 (268)
T ss_dssp             ESCTTSSSCCHHHHHHHHHHHTTCCCCEEEE---CSCCBSSSTTSEEEECCGGG
T ss_pred             EeCCccCcccCHHHHHHHHHhcCCCCCEEEE---eCCCCCccCCceeEEecCCC
Confidence            4799998756999998741111224788874   556521    2356677776

>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4

Probab=92.13  E-value=0.017  Score=43.75  Aligned_cols=50  Identities=24%  Similarity=0.310  Sum_probs=28.0

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCCcCCCC-CCCHH
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGHGSLLH-ENTAA   73 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi   73 (114)
                      ++|||+|+ .|++++++  .++   ++++|.   .+|+. ..             ++.|+++|++.|. +.|++
T Consensus       194 ~~~EE~G~-~G~~~~~~--~~~---~~~~i~---~d~~~-~~-------------~~~G~~~h~~~~~~G~g~~  244 (340)
T 2fvg_A          194 TVQEETGL-RGSAVVVE--QLK---PTCAIV---VETTT-AG-------------DNPELEERKWATHLGDGPA  244 (340)
T ss_dssp             ECCCC------CHHHHH--HHC---CSEEEE---EEEEE-EC-------------SCSTTCCSSSSCCTTSCCE
T ss_pred             Ecccccch-hhhHHHhh--ccC---CCEEEE---Eeccc-CC-------------CCCCCccccCCcccCCCcE
Confidence            47999985 79999886  333   466663   23321 11             5688889988884 45543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	114
g1q7l.1	280	c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain	2e-14

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	114
g1q7l.1	280	Aminoacylase-1, catalytic domain {Human (Homo sapi	98.96
d1vgya2	113	Succinyl-diaminopimelate desuccinylase {Neisseria	98.7
d1ysja2	115	Protein YxeP {Bacillus subtilis [TaxId: 1423]}	98.47
d1xmba2	119	IAA-amino acid hydrolase {Mouse-ear cress (Arabido	98.37
d1lfwa2	196	Aminopeptidase PepV {Lactobacillus delbrueckii [Ta	98.35
d1cg2a2	113	Carboxypeptidase G2 {Pseudomonas sp., strain rs-16	98.32
d1z2la2	117	Allantoate amidohydrolase AllC {Escherichia coli [	98.16
d1r3na2	116	Peptidase-like beta-alanine synthase {Yeast (Sacch	98.11
d1vgya1	262	Succinyl-diaminopimelate desuccinylase, catalytic	96.51
d1lfwa1	272	Aminopeptidase PepV {Lactobacillus delbrueckii [Ta	90.36
d1fnoa3	113	Peptidase T (tripeptidase) {Salmonella typhimurium	85.39

>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Bacterial exopeptidase dimerisation domain
family: Bacterial exopeptidase dimerisation domain
domain: Succinyl-diaminopimelate desuccinylase
species: Neisseria meningitidis [TaxId: 487]

Probab=98.70  E-value=9e-10  Score=71.46  Aligned_cols=38  Identities=11%  Similarity=0.076  Sum_probs=34.6

Q ss_pred             ceEEEEEEEeccCCCcCCCC-CCCHHHHHHHHHHHHHHH
Q psy14393         49 TIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKFLAL   86 (114)
Q Consensus        49 G~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l~~~   86 (114)
                      |.++++|+++|++||+|+|+ +.|||..+++++..+.++
T Consensus         1 Gsl~~~i~i~Gk~gHaa~P~~g~NpI~~~~~~i~~l~~~   39 (113)
T d1vgya2           1 GSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQE   39 (113)
T ss_dssp             EEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHC
T ss_pred             CceEEEEEEEEEeecccCcccCCCcHHHHHHHHHHHHhh
Confidence            78999999999999999996 699999999999888653

>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Bacterial exopeptidase dimerisation domain
family: Bacterial exopeptidase dimerisation domain
domain: Protein YxeP
species: Bacillus subtilis [TaxId: 1423]

Probab=98.47  E-value=4.6e-08  Score=63.14  Aligned_cols=39  Identities=15%  Similarity=0.267  Sum_probs=23.4

Q ss_pred             EEEEEEeccCCCcCCCC-CCCHHHHHHHHHHHHHHHHHHH
Q psy14393         52 QMKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKFLALREEE   90 (114)
Q Consensus        52 ~~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l~~~~~~~   90 (114)
                      .|+|+++|+++|+|+|+ +.|||..+++++..|+++..+.
T Consensus         4 ~f~v~v~Gk~aHaa~P~~g~nai~~a~~~i~~l~~~~~~~   43 (115)
T d1ysja2           4 RFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRN   43 (115)
T ss_dssp             EEEEEEECC--------CCCCHHHHHHHHHHHHC------
T ss_pred             EEEEEEEEecccccCcccCcCHHHHHHHHHHHhcccchhc
Confidence            48999999999999996 5999999999999997765443

>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Bacterial exopeptidase dimerisation domain
family: Bacterial exopeptidase dimerisation domain
domain: IAA-amino acid hydrolase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.37  E-value=4.3e-08  Score=63.83  Aligned_cols=39  Identities=13%  Similarity=0.103  Sum_probs=16.6

Q ss_pred             ceEEEEEEEeccCCCcCCCC-CCCHHHHHHHHHHHHHHHH
Q psy14393         49 TIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKFLALR   87 (114)
Q Consensus        49 G~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l~~~~   87 (114)
                      |..+|+|+++|+++|+|+|+ +.|||..+++++..|+++.
T Consensus         2 g~~~f~I~v~Gk~~Has~P~~g~nai~~~~~~i~~l~~~~   41 (119)
T d1xmba2           2 GAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLV   41 (119)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHTTC
T ss_pred             CceEEEEEEEeecccccCcccCCCHHHHHHHHHHhhhhcc
Confidence            67789999999999999996 5999999999999987654

>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Bacterial exopeptidase dimerisation domain
family: Bacterial exopeptidase dimerisation domain
domain: Aminopeptidase PepV
species: Lactobacillus delbrueckii [TaxId: 1584]

Probab=98.35  E-value=3.5e-08  Score=68.70  Aligned_cols=43  Identities=14%  Similarity=0.033  Sum_probs=38.0

Q ss_pred             eecccceEEEEEEEeccCCCcCCCC-CCCHHHHHHHHHHHHHHH
Q psy14393         44 FNGERTIWQMKIHCPGTPGHGSLLH-ENTAAEKVNYIMNKFLAL   86 (114)
Q Consensus        44 ~~aeKG~~~~~v~v~G~~gHsS~P~-~~nAi~~~~~~i~~l~~~   86 (114)
                      +..+++..+++|+++|+++|||+|+ +.|||..|+++|.+|...
T Consensus        64 g~~~~~~~~~~i~~~Gk~aHss~P~~G~NAi~~l~~~l~~l~~~  107 (196)
T d1lfwa2          64 GSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFA  107 (196)
T ss_dssp             EEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBC
T ss_pred             eEEEEecceEEEEEEEEECCccCcccCcCHHHHHHHHHHHhhhc
Confidence            4667888899999999999999997 599999999999988643

>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Bacterial exopeptidase dimerisation domain
family: Bacterial exopeptidase dimerisation domain
domain: Carboxypeptidase G2
species: Pseudomonas sp., strain rs-16 [TaxId: 306]

Probab=98.32  E-value=1.7e-07  Score=59.88  Aligned_cols=39  Identities=10%  Similarity=0.164  Sum_probs=34.7

Q ss_pred             ceEEEEEEEeccCCCc-CCCC-CCCHHHHHHHHHHHHHHHH
Q psy14393         49 TIWQMKIHCPGTPGHG-SLLH-ENTAAEKVNYIMNKFLALR   87 (114)
Q Consensus        49 G~~~~~v~v~G~~gHs-S~P~-~~nAi~~~~~~i~~l~~~~   87 (114)
                      |.+||+|+++|+++|+ |.|+ +.||+..+++++.+|+++.
T Consensus         2 G~~~~~v~~~Gk~~Hag~~P~~g~nAi~~a~~~i~~l~~~~   42 (113)
T d1cg2a2           2 GIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNID   42 (113)
T ss_dssp             EEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGC
T ss_pred             CeEEEEEEEEeECccccCCccccCcchHHHHHHHHHHHhhh
Confidence            7899999999999995 8896 5999999999999986653

>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Bacterial exopeptidase dimerisation domain
family: Bacterial exopeptidase dimerisation domain
domain: Allantoate amidohydrolase AllC
species: Escherichia coli [TaxId: 562]

Probab=98.16  E-value=1.5e-06  Score=55.66  Aligned_cols=41  Identities=7%  Similarity=0.074  Sum_probs=35.1

Q ss_pred             ceEEEEEEEeccCCCc-CCCC--CCCHHHHHHHHHHHHHHHHHH
Q psy14393         49 TIWQMKIHCPGTPGHG-SLLH--ENTAAEKVNYIMNKFLALREE   89 (114)
Q Consensus        49 G~~~~~v~v~G~~gHs-S~P~--~~nAi~~~~~~i~~l~~~~~~   89 (114)
                      |..|++|+++|+++|+ |.|+  +.||+..+++++..+.++..+
T Consensus         2 G~~~~~v~~~G~~aHAGs~P~~~~~~al~aaa~~~~~l~~~~~~   45 (117)
T d1z2la2           2 GQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR   45 (117)
T ss_dssp             EEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEEEEECCCCCCCcccccccHHHHHHHHHHHHHHHHHh
Confidence            7899999999999995 9993  489999999999988665443

>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Bacterial exopeptidase dimerisation domain
family: Bacterial exopeptidase dimerisation domain
domain: Peptidase-like beta-alanine synthase
species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]

Probab=98.11  E-value=1.6e-06  Score=55.45  Aligned_cols=39  Identities=13%  Similarity=0.088  Sum_probs=33.2

Q ss_pred             eEEEEEEEeccCCC-cCCCC--CCCHHHHHHHHHHHHHHHHH
Q psy14393         50 IWQMKIHCPGTPGH-GSLLH--ENTAAEKVNYIMNKFLALRE   88 (114)
Q Consensus        50 ~~~~~v~v~G~~gH-sS~P~--~~nAi~~~~~~i~~l~~~~~   88 (114)
                      +-||+|+++|+++| |+.|+  +.||+..+++++..++++..
T Consensus         2 ~~W~~v~v~G~~aHAGs~P~~~~~da~~aa~~~i~~l~~~~~   43 (116)
T d1r3na2           2 YNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQ   43 (116)
T ss_dssp             EEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEEEEECcccCCCcccccchHHHHHHHHHhhcccccc
Confidence            45999999999999 59993  48999999999999876543

>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Succinyl-diaminopimelate desuccinylase, catalytic domain
species: Neisseria meningitidis [TaxId: 487]

Probab=96.51  E-value=0.0001  Score=52.53  Aligned_cols=60  Identities=17%  Similarity=0.084  Sum_probs=35.5

Q ss_pred             CCccCcCcccchHHhhcccccccCCeeEEEecCcccCCCcceeeecccceEEEEEEEeccCCC
Q psy14393          1 MLDEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPGH   63 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~~~~~~~~~~~~idEG~~~~~~~~~i~~aeKG~~~~~v~v~G~~gH   63 (114)
                      ++|||.+++.|++++++........++++|   +++|+....+....++..+....+.|..+|
T Consensus       131 ~~dEE~~~~~G~~~l~~~~~~~~~~~~~~i---vgEpt~~~~~g~~~~~~~~~~~~~~~~~~~  190 (262)
T d1vgya1         131 TSDEEGDALDGTTKVVDVLKARDELIDYCI---VGEPTAVDKLGDMIKNGRRPFLTQAGKLTD  190 (262)
T ss_dssp             ESCSSSCCTTSHHHHHHHHHHTTCCEEEEE---ECCCCBSSSTTSEEECEECCEECCSSHHHH
T ss_pred             EecCccccccCHHHHHhHhhhcCCCccccc---ccCCCCccceeeEEEeeeeeeeccccccch
Confidence            479998889999999985222333478888   467764333333333333444444544433

>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Aminopeptidase PepV
species: Lactobacillus delbrueckii [TaxId: 1584]

Probab=90.36  E-value=0.0037  Score=44.69  Aligned_cols=17  Identities=18%  Similarity=0.299  Sum_probs=14.5

Q ss_pred             CCccCcCcccchHHhhcc
Q psy14393          1 MLDEEIGGSQGMSLFVTT   18 (114)
Q Consensus         1 ~~DEE~Gg~~G~~~l~~~   18 (114)
                      ++|||+|+ .|+++++++
T Consensus       150 ~~~EE~g~-~g~~~~~~~  166 (272)
T d1lfwa1         150 GTNEETNW-VGIDYYLKH  166 (272)
T ss_dssp             ESCTTTTC-HHHHHHHHH
T ss_pred             EcccccCC-ccHHHHHHh
Confidence            47999986 799999985

>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Bacterial exopeptidase dimerisation domain
family: Bacterial exopeptidase dimerisation domain
domain: Peptidase T (tripeptidase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.39  E-value=0.44  Score=29.84  Aligned_cols=33  Identities=15%  Similarity=0.053  Sum_probs=28.6

Q ss_pred             EEEEEEEeccCCCcCCCCC--CCHHHHHHHHHHHH
Q psy14393         51 WQMKIHCPGTPGHGSLLHE--NTAAEKVNYIMNKF   83 (114)
Q Consensus        51 ~~~~v~v~G~~gHsS~P~~--~nAi~~~~~~i~~l   83 (114)
                      ...+|+++|.+.|=...-+  .||+..+++++..|
T Consensus         4 a~a~i~i~G~svHPG~AKgkMvNA~~~A~ef~~~L   38 (113)
T d1fnoa3           4 ASVNIKIVGNNVHPGTAKGVMVNALSLAARIHAEV   38 (113)
T ss_dssp             EEEEEEEECBCCCGGGCTTTCBCHHHHHHHHHHTS
T ss_pred             ceEEEEEEEEEeCCcchhhHHHhHHHHHHHHHHhC
Confidence            4578999999999877754  99999999999877