Psyllid ID: psy14480

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
MKIKISNFTTPHPSYECIIALRCLYKKSHQPQIWDKLMQLEAHVEEYKNSPKYENDRRNVVQFLLNFFKLNEEFTQEEILKICGIIQVNAHEMPLTEPSYIAIFDRASFIEHNCYPNLYKSFTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTELNTFYDGVKCPE
ccEEcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHccHHccccccccccccEEEEEccccccccccccccEEEEccccEEEEEEEcccccccEEEEEEccccccHHHHHHHHHccccEEEEccccccccccccccccccccc
ccEEEEcccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccEEcccccccEEEEEccHEEEcccccccEEEEEccccEEEEEEEEEcccccEEEEEEHHHHHcHHHHHHHHHHcccEEEEccccccccccccEEEEEEccc
mkikisnfttphpsyECIIALRClykkshqpqIWDKLMQLEAHVEEyknspkyendRRNVVQFLLNFFKLNEEFTQEEILKICGIIqvnahempltepsyiaifdrasfiehncypnlyksfTDSGQVLLRAmkpiapgdhlsicytdplwgtinrrhhlqTSKYFIcqcercrdptelntfydgvkcpe
mkikisnfttphpsyECIIALRCLYKKSHQPQIWDKLMQLEAHVEEYknspkyendRRNVVQFLLNFFKLNEEFTQEEILKICGIIQVNAHEMPLTEPSYIAIFDRASFIEHNCYPNLYKSFTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTelntfydgvkcpe
MKIKISNFTTPHPSYECIIALRCLYKKSHQPQIWDKLMQLEAHVEEYKNSPKYENDRRNVVQfllnffklneefTQEEILKICGIIQVNAHEMPLTEPSYIAIFDRASFIEHNCYPNLYKSFTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTELNTFYDGVKCPE
********TTPHPSYECIIALRCLYKKSHQPQIWDKLMQLEAHVEEYKNSPKYENDRRNVVQFLLNFFKLNEEFTQEEILKICGIIQVNAHEMPLTEPSYIAIFDRASFIEHNCYPNLYKSFTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTELNTFYDGV****
*KIKISNFTTPHPSYECIIALRCLYKKSHQPQIWDKLMQLEAHVEEYKNSPKYENDRRNVVQFLLNFFKLNEEFTQEEILKICGIIQVNAHEMPLTEPSYIAIFDRASFIEHNCYPNLYKSFTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTELNTFYDGVKCPE
MKIKISNFTTPHPSYECIIALRCLYKKSHQPQIWDKLMQLEAHVEEYKNSPKYENDRRNVVQFLLNFFKLNEEFTQEEILKICGIIQVNAHEMPLTEPSYIAIFDRASFIEHNCYPNLYKSFTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTELNTFYDGVKCPE
MKIKISNFTTPHPSYECIIALRCLYKKSHQPQIWDKLMQLEAHVEEYKNSPKYENDRRNVVQFLLNFFKLNEEFTQEEILKICGIIQVNAHEMPLTEPSYIAIFDRASFIEHNCYPNLYKSFTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTELNTFYDGVKCPE
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKIKISNFTTPHPSYECIIALRCLYKKSHQPQIWDKLMQLEAHVEEYKNSPKYENDRRNVVQFLLNFFKLNEEFTQEEILKICGIIQVNAHEMPLTEPSYIAIFDRASFIEHNCYPNLYKSFTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTELNTFYDGVKCPE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query190 2.2.26 [Sep-21-2011]
O46040 462 Protein msta, isoform A O no N/A 0.705 0.290 0.285 1e-13
P83501 448 Protein msta, isoform B O no N/A 0.515 0.218 0.330 9e-12
Q54D67343 SET and MYND domain-conta no N/A 0.494 0.274 0.364 4e-10
P38890526 Putative protein lysine m yes N/A 0.578 0.209 0.338 8e-09
A6ZTB4526 Potential protein lysine N/A N/A 0.578 0.209 0.338 8e-09
P97443 490 SET and MYND domain-conta yes N/A 0.789 0.306 0.253 2e-08
Q8NB12 490 SET and MYND domain-conta yes N/A 0.768 0.297 0.257 5e-08
Q0P585 433 N-lysine methyltransferas no N/A 0.815 0.357 0.258 2e-07
Q7XJS0 480 Histone-lysine N-methyltr yes N/A 0.752 0.297 0.273 2e-07
Q7M6Z3 433 N-lysine methyltransferas no N/A 0.815 0.357 0.258 3e-07
>sp|O46040|MSTAA_DROME Protein msta, isoform A OS=Drosophila melanogaster GN=msta PE=2 SV=3 Back     alignment and function desciption
 Score = 76.6 bits (187), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 6/140 (4%)

Query: 57  RRNVVQFLLNF--FKLNEEFTQEEILKICGIIQVNAHEMPLTEPSY----IAIFDRASFI 110
           RR ++Q    F  F   +    +++ +I G++  NA E P     +      +F   + +
Sbjct: 191 RREIIQAAQCFRNFPTTDRVFMDQLFRIVGVLNTNAFEAPCRSGGHETLLRGLFPLTAIM 250

Query: 111 EHNCYPNLYKSFTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQC 170
            H C PN    F +    ++RA + I  G  ++  YT  LWG + R   L+ +K+F C C
Sbjct: 251 NHECTPNASHYFENGRLAVVRAARDIPKGGEITTTYTKILWGNLTRNIFLKMTKHFACDC 310

Query: 171 ERCRDPTELNTFYDGVKCPE 190
            RC D TE  T+   + C E
Sbjct: 311 VRCHDNTENGTYLSALFCRE 330

Drosophila melanogaster (taxid: 7227)
>sp|P83501|MSTAB_DROME Protein msta, isoform B OS=Drosophila melanogaster GN=msta PE=4 SV=2 Back     alignment and function description
>sp|Q54D67|Y2454_DICDI SET and MYND domain-containing protein DDB_G0292454 OS=Dictyostelium discoideum GN=DDB_G0292454 PE=3 SV=1 Back     alignment and function description
>sp|P38890|SET5_YEAST Putative protein lysine methyltransferase SET5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SET5 PE=1 SV=1 Back     alignment and function description
>sp|A6ZTB4|SET5_YEAS7 Potential protein lysine methyltransferase SET5 OS=Saccharomyces cerevisiae (strain YJM789) GN=SET5 PE=3 SV=1 Back     alignment and function description
>sp|P97443|SMYD1_MOUSE SET and MYND domain-containing protein 1 OS=Mus musculus GN=Smyd1 PE=1 SV=3 Back     alignment and function description
>sp|Q8NB12|SMYD1_HUMAN SET and MYND domain-containing protein 1 OS=Homo sapiens GN=SMYD1 PE=2 SV=1 Back     alignment and function description
>sp|Q0P585|SMYD2_BOVIN N-lysine methyltransferase SMYD2 OS=Bos taurus GN=SMYD2 PE=2 SV=1 Back     alignment and function description
>sp|Q7XJS0|ASHR1_ARATH Histone-lysine N-methyltransferase ASHR1 OS=Arabidopsis thaliana GN=ASHR1 PE=2 SV=2 Back     alignment and function description
>sp|Q7M6Z3|SMYD2_RAT N-lysine methyltransferase SMYD2 OS=Rattus norvegicus GN=Smyd2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query190
357603389 544 hypothetical protein KGM_20849 [Danaus p 0.984 0.343 0.540 2e-60
193683573 499 PREDICTED: protein msta, isoform A-like 0.984 0.374 0.518 1e-54
189239848 829 PREDICTED: similar to CG8503 CG8503-PA [ 0.984 0.225 0.505 4e-53
270011901 803 hypothetical protein TcasGA2_TC005992 [T 0.984 0.232 0.502 4e-53
158288115 522 AGAP011530-PA [Anopheles gambiae str. PE 0.984 0.358 0.497 2e-52
383858836 523 PREDICTED: SET and MYND domain-containin 0.989 0.359 0.489 5e-52
312373795 486 hypothetical protein AND_16998 [Anophele 0.978 0.382 0.489 6e-51
380018360 467 PREDICTED: protein msta, isoform A-like 0.957 0.389 0.508 3e-50
328784417 440 PREDICTED: protein msta, isoform A-like 0.957 0.413 0.508 7e-50
350420138 442 PREDICTED: hypothetical protein LOC10074 0.952 0.409 0.475 3e-49
>gi|357603389|gb|EHJ63740.1| hypothetical protein KGM_20849 [Danaus plexippus] Back     alignment and taxonomy information
 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 101/187 (54%), Positives = 133/187 (71%)

Query: 2   KIKISNFTTPHPSYECIIALRCLYKKSHQPQIWDKLMQLEAHVEEYKNSPKYENDRRNVV 61
           K+ IS +  PHP+Y+C+  LRCLY++ H  ++W+KL  LE H E+ K + K+ENDR+ V 
Sbjct: 134 KVSISTYGIPHPNYQCVTVLRCLYQRDHNMKLWNKLQALETHTEDRKGTDKWENDRKMVA 193

Query: 62  QFLLNFFKLNEEFTQEEILKICGIIQVNAHEMPLTEPSYIAIFDRASFIEHNCYPNLYKS 121
           QF+ +FFKL   F +EEI+K CGIIQ+N HE+PL EP Y+A+FD+ S +EHNC  N  KS
Sbjct: 194 QFIWSFFKLERLFNEEEIMKCCGIIQINGHEVPLLEPEYVAVFDKISMVEHNCRANCNKS 253

Query: 122 FTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTELNT 181
           FT +G+++L A   I  G H+S+CYTDPLWGT  RRHHL  SK+F C CERC D TE  T
Sbjct: 254 FTSNGEIILSAGVAIPRGSHISVCYTDPLWGTEARRHHLSDSKFFECSCERCSDVTEFGT 313

Query: 182 FYDGVKC 188
            +  VKC
Sbjct: 314 MFSAVKC 320

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|193683573|ref|XP_001946512.1| PREDICTED: protein msta, isoform A-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|189239848|ref|XP_973542.2| PREDICTED: similar to CG8503 CG8503-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270011901|gb|EFA08349.1| hypothetical protein TcasGA2_TC005992 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|158288115|ref|XP_309979.4| AGAP011530-PA [Anopheles gambiae str. PEST] gi|157019319|gb|EAA05706.4| AGAP011530-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|383858836|ref|XP_003704905.1| PREDICTED: SET and MYND domain-containing protein DDB_G0273589-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|312373795|gb|EFR21480.1| hypothetical protein AND_16998 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|380018360|ref|XP_003693098.1| PREDICTED: protein msta, isoform A-like [Apis florea] Back     alignment and taxonomy information
>gi|328784417|ref|XP_624539.3| PREDICTED: protein msta, isoform A-like [Apis mellifera] Back     alignment and taxonomy information
>gi|350420138|ref|XP_003492412.1| PREDICTED: hypothetical protein LOC100743563 [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query190
FB|FBgn0033917 513 CG8503 [Drosophila melanogaste 0.989 0.366 0.396 2.1e-36
FB|FBgn0033061 553 CG14590 [Drosophila melanogast 0.9 0.309 0.338 3.8e-24
FB|FBgn0036839 530 CG18136 [Drosophila melanogast 0.915 0.328 0.350 9.1e-24
FB|FBgn0030257 532 CG11160 [Drosophila melanogast 0.910 0.325 0.278 5.3e-17
FB|FBgn0034183 498 CG9642 [Drosophila melanogaste 0.894 0.341 0.276 2.6e-16
FB|FBgn0034182 488 CG9640 [Drosophila melanogaste 0.610 0.237 0.333 3.5e-13
FB|FBgn0053548 462 msta "msta" [Drosophila melano 0.6 0.246 0.305 4.1e-13
DICTYBASE|DDB_G0292454343 DDB_G0292454 "SET domain-conta 0.494 0.274 0.364 6.6e-11
FB|FBgn0030102 500 CG12119 [Drosophila melanogast 0.484 0.184 0.344 8.9e-11
SGD|S000001250526 SET5 "Methyltransferase involv 0.410 0.148 0.395 9.7e-11
FB|FBgn0033917 CG8503 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 75/189 (39%), Positives = 109/189 (57%)

Query:     2 KIKISNFTTPHPSYECIIALRCLYKKSHQPQIWDKLMQLEAHVEEYKNSPKYENDRRNVV 61
             K+ +  F  PHP Y C+  +RCL       +   K   LE+     + S +++ D  ++ 
Sbjct:   131 KVNVQEFGGPHPLYTCLSTVRCLLIGETSTEKASKFQDLESLESTRRGSNQWKADLVSIG 190

Query:    62 QXXXXXXXXXXXXTQEEILKICGIIQVNAHEMPLTEPSYIAIFDRASFIEHNCYPNLYKS 121
             Q            T+EEI+K  G +Q+N HE+P T+PS++A+F  ASF E++C PNL KS
Sbjct:   191 QFIPKFFKTQKF-TEEEIMKAVGALQINGHEVPTTDPSHVAVFYTASFTENSCLPNLAKS 249

Query:   122 FTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTELNT 181
             F  +G  +L A + I    HLSICY+D +WGT +R+ HL  +K F C CERC D TEL+T
Sbjct:   250 FNKNGHCILWAPREIKKNAHLSICYSDAMWGTADRQRHLMQTKLFKCACERCVDVTELDT 309

Query:   182 FYDGVKCPE 190
              Y  +KC +
Sbjct:   310 NYSAIKCED 318
GO:0008270 "zinc ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=IDA
GO:0042826 "histone deacetylase binding" evidence=ISS
GO:0010629 "negative regulation of gene expression" evidence=ISS
FB|FBgn0033061 CG14590 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0036839 CG18136 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0030257 CG11160 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0034183 CG9642 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0034182 CG9640 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0053548 msta "msta" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0292454 DDB_G0292454 "SET domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0030102 CG12119 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
SGD|S000001250 SET5 "Methyltransferase involved in methylation of histone H4 Lys5, -8, -12" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query190
smart00317124 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest 1e-05
pfam00856113 pfam00856, SET, SET domain 5e-04
>gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information 
 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 107 ASFIEHNCYPNLYKSFT---DSGQVLLRAMKPIAPGDHLSICYTDPLWGT 153
           A FI H+C PN    F       ++++ A++ I PG+ L+I Y       
Sbjct: 75  ARFINHSCEPNCELLFVEVNGDDRIVIFALRDIKPGEELTIDYGSDYANE 124

Putative methyl transferase, based on outlier plant homologues. Length = 124
>gnl|CDD|216155 pfam00856, SET, SET domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 190
KOG2084|consensus 482 99.63
PF00856162 SET: SET domain; InterPro: IPR001214 The SET domai 99.55
smart00317116 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) 99.32
KOG2589|consensus 453 98.85
COG2940480 Proteins containing SET domain [General function p 98.44
KOG4442|consensus 729 98.31
KOG1080|consensus1005 98.26
KOG1337|consensus 472 97.83
KOG1082|consensus364 97.71
KOG1141|consensus1262 97.32
KOG1083|consensus1306 96.98
KOG1085|consensus392 96.95
KOG1338|consensus 466 96.8
KOG1079|consensus739 95.77
KOG1081|consensus463 92.7
>KOG2084|consensus Back     alignment and domain information 
Probab=99.63  E-value=4.3e-15  Score=131.85  Aligned_cols=113  Identities=35%  Similarity=0.620  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHhcccccCC----CC--CceEEEcccccccCCCCCCCceeEecCCCEEEEEEcccCCCCC-eeeeeccC
Q psy14480         76 QEEILKICGIIQVNAHEMPL----TE--PSYIAIFDRASFIEHNCYPNLYKSFTDSGQVLLRAMKPIAPGD-HLSICYTD  148 (190)
Q Consensus        76 ~~~~~~~~~~~~~N~f~i~~----~~--~~~~gl~p~~s~~NHSC~PN~~~~~~~~~~~~~~a~r~I~~Ge-EltisY~~  148 (190)
                      .+.+..++..+..+++....    ..  ..+.|+||..+++||||.||+...|+ +....+++...+.+++ |++++|++
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~hsC~pn~~~~~~-~~~~~~~~~~~~~~~~~~l~~~y~~  247 (482)
T KOG2084|consen  169 ADCISKLFPSLLCNSITNASSLRVPEPLFLGRGLFPGSSLFNHSCFPNISVIFD-GRGLALLVPAGIDAGEEELTISYTD  247 (482)
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhhccccccceeeecccchhcccCCCCCeEEEEC-CceeEEEeecccCCCCCEEEEeecc
Confidence            44556667777777776654    11  48999999999999999999998886 6677777888888876 99999999


Q ss_pred             CCCCHHHHHHHhccCCCeeeecCCCCCCCCCCccccccccC
Q psy14480        149 PLWGTINRRHHLQTSKYFICQCERCRDPTELNTFYDGVKCP  189 (190)
Q Consensus       149 ~~~~~~~R~~~L~~~~~F~C~C~~C~~~~e~~~~~~~~~C~  189 (190)
                      ..+++..|++.|+..|.|.|.|++|.++++.+...++++|.
T Consensus       248 ~~~~~~~r~~~l~~~~~f~c~c~rc~d~~~~~~~~~~~~c~  288 (482)
T KOG2084|consen  248 PLLSTASRQKQLRQSKLFSCQCPRCLDPTELGTFLSSLRCE  288 (482)
T ss_pred             cccCHHHHHHHHhhccceeeecCCCCCCCccccchhhhhhc
Confidence            99999999999999999999999999999999999988884

>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco Back     alignment and domain information
>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information
>KOG2589|consensus Back     alignment and domain information
>COG2940 Proteins containing SET domain [General function prediction only] Back     alignment and domain information
>KOG4442|consensus Back     alignment and domain information
>KOG1080|consensus Back     alignment and domain information
>KOG1337|consensus Back     alignment and domain information
>KOG1082|consensus Back     alignment and domain information
>KOG1141|consensus Back     alignment and domain information
>KOG1083|consensus Back     alignment and domain information
>KOG1085|consensus Back     alignment and domain information
>KOG1338|consensus Back     alignment and domain information
>KOG1079|consensus Back     alignment and domain information
>KOG1081|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query190
3n71_A 490 Crystal Structure Of Cardiac Specific Histone Methy 2e-07
3ru0_A 438 Cocrystal Structure Of Human Smyd3 With Inhibitor S 4e-07
3oxf_A 436 Human Lysine Methyltransferase Smyd3 In Complex Wit 4e-07
3pdn_A 428 Crystal Structure Of Smyd3 In Complex With Methyltr 4e-07
3qwp_A 429 Crystal Structure Of Set And Mynd Domain Containing 4e-07
3oxg_A 464 Human Lysine Methyltransferase Smyd3 In Complex Wit 4e-07
3mek_A 429 Crystal Structure Of Human Histone-Lysine N- Methyl 5e-07
3qwv_A 433 Crystal Structure Of Histone Lysine Methyltransfera 8e-07
3rib_A 441 Human Lysine Methyltransferase Smyd2 In Complex Wit 1e-06
3s7b_A 433 Structural Basis Of Substrate Methylation And Inhib 1e-06
3tg4_A 433 Structure Of Smyd2 In Complex With Sam Length = 433 1e-06
>pdb|3N71|A Chain A, Crystal Structure Of Cardiac Specific Histone Methyltransferase Smyd1 Length = 490 Back     alignment and structure 
Iteration: 1

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 79  ILKICGIIQVNAHEMP---LTEPSYIAIFDRASFIEHNCYPNLYKSFTDSG--------- 126
           I  I G+I  N   +      +   + IF     + H+C+PN    F +           
Sbjct: 170 ISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFH 229
Query: 127 ---QVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTELNTFY 183
              ++ LRA+  I+ G+ L++ Y D L  +  RR  L+   YF C CE C+   + + F 
Sbjct: 230 TQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCEHCQKGLKDDLFL 289
Query: 184 DGVKCPE 190
              + P+
Sbjct: 290 AAKEDPK 296
>pdb|3RU0|A Chain A, Cocrystal Structure Of Human Smyd3 With Inhibitor Sinefungin Bound Length = 438 Back     alignment and structure
>pdb|3OXF|A Chain A, Human Lysine Methyltransferase Smyd3 In Complex With Adohcy (Form I) Length = 436 Back     alignment and structure
>pdb|3PDN|A Chain A, Crystal Structure Of Smyd3 In Complex With Methyltransferase Inhibitor Sinefungin Length = 428 Back     alignment and structure
>pdb|3QWP|A Chain A, Crystal Structure Of Set And Mynd Domain Containing 3; Zinc Finger Mynd Domain-Containing Protein 1 Length = 429 Back     alignment and structure
>pdb|3OXG|A Chain A, Human Lysine Methyltransferase Smyd3 In Complex With Adohcy (Form Iii) Length = 464 Back     alignment and structure
>pdb|3MEK|A Chain A, Crystal Structure Of Human Histone-Lysine N- Methyltransferase Smyd3 In Complex With S-Adenosyl-L- Methionine Length = 429 Back     alignment and structure
>pdb|3QWV|A Chain A, Crystal Structure Of Histone Lysine Methyltransferase Smyd2 In Complex With The Cofactor Product Adohcy Length = 433 Back     alignment and structure
>pdb|3RIB|A Chain A, Human Lysine Methyltransferase Smyd2 In Complex With Adohcy Length = 441 Back     alignment and structure
>pdb|3S7B|A Chain A, Structural Basis Of Substrate Methylation And Inhibition Of Smyd2 Length = 433 Back     alignment and structure
>pdb|3TG4|A Chain A, Structure Of Smyd2 In Complex With Sam Length = 433 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query190
3qww_A 433 SET and MYND domain-containing protein 2; methyltr 6e-36
3qwp_A 429 SET and MYND domain-containing protein 3; SMYD3,SE 3e-33
3n71_A 490 Histone lysine methyltransferase SMYD1; heart deve 1e-32
3rq4_A247 Histone-lysine N-methyltransferase SUV420H2; suppr 4e-06
3s8p_A273 Histone-lysine N-methyltransferase SUV420H1; SET d 3e-04
1n3j_A119 A612L, histone H3 lysine methyltransferase; beta b 4e-04
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 Back     alignment and structure
 Score =  129 bits (324), Expect = 6e-36
 Identities = 37/188 (19%), Positives = 80/188 (42%), Gaps = 4/188 (2%)

Query: 4   KISNFTTPHPSYECIIALRCLYKKSHQPQIWDKLMQLEAHVEEYKNSPKYENDRRNVVQF 63
           +  N +        I+A + ++ +    +    + + E+H+++  N  K +  + ++   
Sbjct: 98  ENWNPSETVRLTARILAKQKIHPERTPSEKLLAVREFESHLDKLDNE-KKDLIQSDIAAL 156

Query: 64  LLNFFKLNEEFTQEEILKICGIIQVNAHEMPLTEPSYI--AIFDRASFIEHNCYPNLYKS 121
              + K  E      ++ +   +  N   +   E S++  AIF   + + H+C PN+  +
Sbjct: 157 HQFYSKYLEFPDHSSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVT 216

Query: 122 FTDSGQVLLRAMKPIAPGDHLSICYTDPLWGTINRRHHLQTSKYFICQCERCRDPTELNT 181
           +       +RA++ I PGD +   Y D L+ T +R   L+ S +F C+C  C    +   
Sbjct: 217 Y-KGTLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECRECTTKDKDKA 275

Query: 182 FYDGVKCP 189
             +  K  
Sbjct: 276 KVEVRKLS 283
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429 Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Length = 490 Back     alignment and structure
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247 Back     alignment and structure
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273 Back     alignment and structure
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query190
3n71_A 490 Histone lysine methyltransferase SMYD1; heart deve 100.0
3qww_A 433 SET and MYND domain-containing protein 2; methyltr 100.0
3qwp_A 429 SET and MYND domain-containing protein 3; SMYD3,SE 100.0
3rq4_A247 Histone-lysine N-methyltransferase SUV420H2; suppr 99.73
3s8p_A273 Histone-lysine N-methyltransferase SUV420H1; SET d 99.6
1n3j_A119 A612L, histone H3 lysine methyltransferase; beta b 99.51
2w5y_A192 Histone-lysine N-methyltransferase HRX; transcript 99.39
3f9x_A166 Histone-lysine N-methyltransferase SETD8; methyltr 99.33
3ooi_A232 Histone-lysine N-methyltransferase, H3 lysine-36 l 99.28
3ope_A222 Probable histone-lysine N-methyltransferase ASH1L; 99.27
3smt_A 497 Histone-lysine N-methyltransferase SETD3; histone 99.22
3qxy_A 449 N-lysine methyltransferase SETD6; epigenetics, pro 99.22
3h6l_A278 Histone-lysine N-methyltransferase SETD2; SET doma 99.19
3hna_A287 Histone-lysine N-methyltransferase, H3 lysine-9 sp 99.16
1ml9_A302 Histone H3 methyltransferase DIM-5; adoMet-depende 99.15
2f69_A261 Histone-lysine N-methyltransferase, H3 lysine-4 sp 99.04
1mvh_A299 Cryptic LOCI regulator 4; lysine methyltransferase 99.03
2r3a_A300 Histone-lysine N-methyltransferase SUV39H2; histon 99.0
3bo5_A290 Histone-lysine N-methyltransferase setmar; SET dom 98.96
1h3i_A293 Histone H3 lysine 4 specific methyltransferase; 2. 98.95
2h21_A 440 Ribulose-1,5 bisphosphate carboxylase/oxygenase; S 98.95
2qpw_A149 PR domain zinc finger protein 2; methyltransferase 98.89
3db5_A151 PR domain zinc finger protein 4; methyltransferase 98.06
3ep0_A170 PR domain zinc finger protein 12; PR domain-contai 97.92
3dal_A196 PR domain zinc finger protein 1; methyltransferase 97.67
3ihx_A152 PR domain zinc finger protein 10; PRDM10, methyltr 97.47
3ray_A237 PR domain-containing protein 11; structural genomi 97.27
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1.3e-36  Score=272.59  Aligned_cols=174  Identities=25%  Similarity=0.472  Sum_probs=144.9

Q ss_pred             CCCchhHHHHHHHHHcccCCh-----hHHHHHhhhhccccccCCCchhhHHHHHHHHHHHHhhccCCCCCHHHHHHHHHH
Q psy14480         11 PHPSYECIIALRCLYKKSHQP-----QIWDKLMQLEAHVEEYKNSPKYENDRRNVVQFLLNFFKLNEEFTQEEILKICGI   85 (190)
Q Consensus        11 ~~~~~~~~l~~Ril~~~~~~~-----~~~~~v~~L~sh~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~   85 (190)
                      +.|...+++++|+|++...++     ..|..|.+|++|.+++.++ .+......+..++..+......++.+++..++++
T Consensus        98 ~~p~~~~rl~lRiL~~~~~~~~~~~~~~~~~~~~L~sh~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  176 (490)
T 3n71_A           98 KVPNENIRLAARIMWRVEREGTGLTEGCLVSVDDLQNHVEHFGEE-EQKELRVDVDTFLQYWPPQSQQFSMQYISHIFGV  176 (490)
T ss_dssp             SCCCHHHHHHHHHHHHHHHTTSSBCTTCSSBGGGSCCCGGGCCHH-HHHHHHHHHHHHHHHSCTTSCCCCHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHhhccCccCcchhhhHHHHHHhhhhhcCch-HHHHHHHHHHHHHHHccccccCCCHHHHHHHHHH
Confidence            378899999999999765433     3477899999999998864 3444555666666544333335889999999999


Q ss_pred             HHhcccccCCC---CCceEEEcccccccCCCCCCCceeEecCCC------------EEEEEEcccCCCCCeeeeeccCCC
Q psy14480         86 IQVNAHEMPLT---EPSYIAIFDRASFIEHNCYPNLYKSFTDSG------------QVLLRAMKPIAPGDHLSICYTDPL  150 (190)
Q Consensus        86 ~~~N~f~i~~~---~~~~~gl~p~~s~~NHSC~PN~~~~~~~~~------------~~~~~a~r~I~~GeEltisY~~~~  150 (190)
                      +.+|+|++.+.   ...|.||||.+|+|||||.||+.+.|+++.            .+.|+|+|||++||||||||++..
T Consensus       177 ~~~N~f~i~~~~g~~~~g~gl~p~~s~~NHSC~PN~~~~~~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~  256 (490)
T 3n71_A          177 INCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFL  256 (490)
T ss_dssp             HHTTEEEEECTTSCSEEEEEECTTGGGCEECSSCSEEEEEECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSC
T ss_pred             HhccCcccccCCCCccceEEEchhhhhcccCCCCCeeEEecCCccccccccccccceEEEEECCCCCCCCEEEEeecCCC
Confidence            99999999863   356899999999999999999999997432            999999999999999999999999


Q ss_pred             CCHHHHHHHhccCCCeeeecCCCCCCCCCCccccc
Q psy14480        151 WGTINRRHHLQTSKYFICQCERCRDPTELNTFYDG  185 (190)
Q Consensus       151 ~~~~~R~~~L~~~~~F~C~C~~C~~~~e~~~~~~~  185 (190)
                      +++.+||+.|++.|+|+|.|++|.++.+++.+++.
T Consensus       257 ~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~~~~~~  291 (490)
T 3n71_A          257 HLSEERRRQLKKQYYFDCSCEHCQKGLKDDLFLAA  291 (490)
T ss_dssp             SCHHHHHHHHHHHHSSCCCCHHHHHTTTHHHHTCB
T ss_pred             CCHHHHHHHHHCCCCeEeeCCCCCCCCcccchhhc
Confidence            99999999999999999999999999876654443
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Back     alignment and structure
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Back     alignment and structure
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Back     alignment and structure
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Back     alignment and structure
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A* Back     alignment and structure
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Back     alignment and structure
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Back     alignment and structure
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} Back     alignment and structure
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* Back     alignment and structure
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Back     alignment and structure
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Back     alignment and structure
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Back     alignment and structure
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Back     alignment and structure
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Back     alignment and structure
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Back     alignment and structure
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Back     alignment and structure
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* Back     alignment and structure
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Back     alignment and structure
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Back     alignment and structure
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Back     alignment and structure
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Back     alignment and structure
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Back     alignment and structure
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 190
d2g46a1119 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth 2e-05
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 Back     information, alignment and structure

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Viral histone H3 Lysine 27 Methyltransferase
domain: Viral histone H3 Lysine 27 Methyltransferase
species: Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]

 Score = 40.2 bits (93), Expect = 2e-05
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 91  HEMPLTEPSYIAIFDRASFIEHNCYPNLYKSFTDSG-QVLLRAMKPIAPGDHLSICYTDP 149
             +   +          +   H+  PN     T    ++ +  +KPIA G+ ++I Y D 
Sbjct: 49  DYLFSRKNMSAMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISYGDD 108

Query: 150 LWGTINRR 157
            W +  R 
Sbjct: 109 YWLSRPRL 116

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query190
d2h2ja2261 RuBisCo LSMT catalytic domain {Garden pea (Pisum s 99.62
d2g46a1119 Viral histone H3 Lysine 27 Methyltransferase {Para 99.36
d1ml9a_284 Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} 99.21
d2f69a2171 Histone H3 K4-specific methyltransferase SET7/9 ca 98.98
d1mvha_269 SET domain of Clr4 {Fission yeast (Schizosaccharom 98.87
>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: RuBisCo LSMT catalytic domain
domain: RuBisCo LSMT catalytic domain
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=99.62  E-value=9.6e-17  Score=129.01  Aligned_cols=89  Identities=16%  Similarity=0.163  Sum_probs=71.8

Q ss_pred             CCCHHHHHHHHHHHHhcccccCCCCCceEEEcccccccCCCCCCCceeEecC----------CCEEEEEEcccCCCCCee
Q psy14480         73 EFTQEEILKICGIIQVNAHEMPLTEPSYIAIFDRASFIEHNCYPNLYKSFTD----------SGQVLLRAMKPIAPGDHL  142 (190)
Q Consensus        73 ~~~~~~~~~~~~~~~~N~f~i~~~~~~~~gl~p~~s~~NHSC~PN~~~~~~~----------~~~~~~~a~r~I~~GeEl  142 (190)
                      .++.+.+..+++.+.+++|.+.  ...+.+|+|.++++||||.||+...+++          ++.++++|.|+|++||||
T Consensus       157 ~~~~~~~~~a~~~v~sr~~~~~--~~~~~~l~P~~d~~NHsc~pn~~~~~~~~~~~~~~~~~~~~~~l~A~r~I~~GEEI  234 (261)
T d2h2ja2         157 PVTLDDFFWAFGILRSRAFSRL--RNENLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQV  234 (261)
T ss_dssp             CCCHHHHHHHHHHHHHHSBCCC-----CCBCCTTGGGCEECSSCCSCCCCCC-----------CEEEEECSSCCCTTSBC
T ss_pred             ccCHHHHHHHHHHhhccccccc--ccccccchhhhHHhhcCCCCCcccccccccCcccccCCCcEEEEEECCCCCCCCEE
Confidence            4678899999999999999875  3567899999999999999999887742          357999999999999999


Q ss_pred             eeeccCCCCCHHHHHHHhccCCCeee
Q psy14480        143 SICYTDPLWGTINRRHHLQTSKYFIC  168 (190)
Q Consensus       143 tisY~~~~~~~~~R~~~L~~~~~F~C  168 (190)
                      ||||++.. +..    .|...|||.+
T Consensus       235 ~isYG~~~-~n~----~ll~~yGFv~  255 (261)
T d2h2ja2         235 YIQYDLNK-SNA----ELALDYGFIE  255 (261)
T ss_dssp             EECSCSSC-CHH----HHHHHSSCCC
T ss_pred             EEecCCCC-CHH----HHHHhCCCCC
Confidence            99998543 322    3555799976
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Back     information, alignment and structure
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Back     information, alignment and structure
>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure