Psyllid ID: psy14799

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Protein Sequence
MLLSFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERNRQPPYSQDLSPCDIFLLQKLKNQLNGRHRG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccHHcccccccccccccccccccccccHHHcccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEccccHHHHHHHccccccccccccccccEccccHHHHHccccEEcccccccccccccccEccccHHHHHHHHccccccccccccccccccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHcccccccccccEccccHHHHHHHHccccccccEEEcccccccEccccHHHHHHcccc
Coil and Loop (DISEMBL)
MLLSFILDYWNKNYFFFLMGLKLEAHITtvhgdksfqcdecdmsfgthqalgrhkqckhmdislrpfpcdlceqrflnksHLAYHVKThtgerdvtcglcfqsfYSKADLVRHmkgrhlnirSFTChlcnkgffrksYLKVHLLTIHMQPADEAQNAIHRCYAcrcaghclqigthsggicgsmwrvetwhpchllternrqppysqdlspcdIFLLQKLKNqlngrhrg
Flexible Loop (DISEMBL)
MLLSFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERNRQPPYSQDLSPCDIFLLQKLKNQLNGRHRG
Low Complexity Region (SEG)
MLLSFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERNRQPPYSQDLSPCDIFLLQKLKNQLNGRHRG
Disordered region (IsUnstruct)
**LSFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERN*******DLSPCDIFLLQKL**********
Disordered Region (DISOPRED)
MLLSFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERNRQPPYSQDLSPCDIFLLQK**NQLNGRHR*
Disordered Region (DISEMBL)
MLLSFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERNRQPPYSQDLSPCDIFLLQKLKNQLNGRHRG
Disordered Region (DISPRO)
****FILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERNRQPPYSQDLSPCDIFLLQKL**********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLSFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERNRQPPYSQDLSPCDIFLLQKLKNQLNGRHRG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	230	2.2.26 [Sep-21-2011]
Q7Z7K2	595	Zinc finger protein 467 O	yes	N/A	0.539	0.208	0.398	2e-17
Q02525	718	Zinc finger protein 39 OS	yes	N/A	0.517	0.165	0.373	4e-16
P18733	606	Gastrula zinc finger prot	N/A	N/A	0.543	0.206	0.346	7e-16
Q8N895	744	Zinc finger protein 366 O	no	N/A	0.543	0.168	0.379	8e-16
Q08705	728	Transcriptional repressor	yes	N/A	0.539	0.170	0.330	1e-15
P18729	336	Gastrula zinc finger prot	N/A	N/A	0.508	0.348	0.404	1e-15
P08045	1350	Zinc finger protein Xfin	N/A	N/A	0.478	0.081	0.359	2e-15
Q8JZL0	594	Zinc finger protein 467 O	no	N/A	0.530	0.205	0.380	2e-15
Q5RJR4	594	Zinc finger protein 467 O	no	N/A	0.530	0.205	0.380	3e-15
Q5EBL2	1055	Zinc finger protein 628 O	no	N/A	0.513	0.111	0.344	3e-15

>sp|Q7Z7K2|ZN467_HUMAN Zinc finger protein 467 OS=Homo sapiens GN=ZNF467 PE=2 SV=1

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 17  FLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF 76
           F  G  L  H     G++ F C +CD  FG+   L  H +        RPF C  C +RF
Sbjct: 440 FSHGQHLARHPRVHTGERPFACTQCDRRFGSRPNLVAHSR---AHSGARPFACAQCGRRF 496

Query: 77  LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRK 136
             KSHL  H   HTG R   C +C +SF SK +LVRH +  H   R F+C  C K F RK
Sbjct: 497 SRKSHLGRHQAVHTGSRPHACAVCARSFSSKTNLVRH-QAIHTGSRPFSCPQCGKSFSRK 555

Query: 137 SYLKVHLL 144
           ++L  H L
Sbjct: 556 THLVRHQL 563

Transcription factor that promotes adipocyte differentiation and suppresses osteoblast differentiation in the bone marrow. Enhances the osteoclast-supporting ability of stromal cells. Binds with STAT3 the consensus sequence 5'-CTTCTGGGAAGA-3' of the acute phase response element (APRE). Transactivates several promoters including FOS, OSM and PPARG. Recruits a histone deacetylase complex.
Homo sapiens (taxid: 9606)

>sp|Q02525|ZFP39_MOUSE Zinc finger protein 39 OS=Mus musculus GN=Zfp39 PE=2 SV=2

 Score = 85.1 bits (209), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 4/123 (3%)

Query: 23  LEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHL 82
           L  H  T  G K +QC+EC  +F    +L RH++        RP+ C+ C + FL+KS L
Sbjct: 564 LNMHQGTHTGQKPYQCEECGKAFYQKSSLRRHQR---NHTGSRPYACEECRKTFLHKSSL 620

Query: 83  AYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH 142
             H ++HTG +  +C  C ++FYSK+ L  H +  H   + + C LC K F +KSYL  H
Sbjct: 621 TVHQRSHTGYKPYSCEECRKTFYSKSHLTVHQRT-HTGEKPYECKLCKKAFHQKSYLNRH 679

Query: 143 LLT 145
            +T
Sbjct: 680 QVT 682

A putative DNA-binding regulatory protein associated with meiosis in spermatogenesis.

Mus musculus (taxid: 10090)

>sp|P18733|ZG66_XENLA Gastrula zinc finger protein XlCGF66.1 (Fragment) OS=Xenopus laevis PE=2 SV=1

 Score = 84.0 bits (206), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 16  FFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQR 75
           +FL   +L  H  T  G+K + C EC   F T   L  H+Q  H+++  +PF C  C + 
Sbjct: 478 YFLYQSQLVRHQRTHTGEKPYSCSECGKCFATSSQLMAHQQQVHIEV--KPFSCSECGKY 535

Query: 76  FLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFR 135
           FL ++HL  H +THTGE+   C  C + F +   L+ H +  H+ ++ F+C  C K F  
Sbjct: 536 FLYRAHLVRHQRTHTGEKPDFCFECGKCFATSLQLIAHQQQVHMEVKQFSCSECGKSFLY 595

Query: 136 KSYLKVH 142
           +S+L  H
Sbjct: 596 RSHLARH 602

May be involved in transcriptional regulation.

Xenopus laevis (taxid: 8355)

>sp|Q8N895|ZN366_HUMAN Zinc finger protein 366 OS=Homo sapiens GN=ZNF366 PE=1 SV=1

 Score = 84.0 bits (206), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 4/129 (3%)

Query: 17  FLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF 76
           F    +L+ H+TT  G   + C ECD +F     L  H   KH DI  RP+ C  C   F
Sbjct: 374 FPTLAQLKRHLTTHRGPIQYNCSECDKTFQYPSQLQNH-MMKHKDI--RPYICSECGMEF 430

Query: 77  LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRK 136
           +   HL  H  TH G ++  CG+C + F   A++ RH+   H NIR++ CHLC K F +K
Sbjct: 431 VQPHHLKQHSLTHKGVKEHKCGICGREFTLLANMKRHVL-IHTNIRAYQCHLCYKSFVQK 489

Query: 137 SYLKVHLLT 145
             LK H++ 
Sbjct: 490 QTLKAHMIV 498

Has transcriptional repression activity. Acts as corepressor of ESR1; the function seems to involve CTBP1 and histone deacetylases.

Homo sapiens (taxid: 9606)

>sp|Q08705|CTCF_CHICK Transcriptional repressor CTCF OS=Gallus gallus GN=CTCF PE=1 SV=1

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 3/127 (2%)

Query: 23  LEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHL 82
           L  H+ T  G +  +C +CDM+F T   L RH++ KH     +PF C +C+   +  S L
Sbjct: 309 LRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT--HEKPFKCSMCDYASVEVSKL 366

Query: 83  AYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH 142
             H+++HTGER   C LC  +      L RHM+  H   + + C++C+  F +   +K+H
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMR-THSGEKPYECYICHARFTQSGTMKMH 425

Query: 143 LLTIHMQ 149
           +L  H +
Sbjct: 426 ILQKHTE 432

Acts as both a transcriptional activator and repressor of the MYC gene.

Gallus gallus (taxid: 9031)

>sp|P18729|ZG57_XENLA Gastrula zinc finger protein XlCGF57.1 (Fragment) OS=Xenopus laevis PE=3 SV=1

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 4/121 (3%)

Query: 23  LEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHL 82
           L+ H+ T  G+K F C EC  +F     L RH     +    +PF C  C + F +K HL
Sbjct: 49  LQTHMKTHTGEKPFTCTECGKNFAQITTLLRHLT---IHTGEKPFSCTECGKHFAHKGHL 105

Query: 83  AYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH 142
             H+KTHTGE+  TC  C + F  K  LV HMK  H   + FTC  C K F +K+ L  H
Sbjct: 106 VSHMKTHTGEKPFTCTECGKHFAQKGHLVSHMK-THTGEKPFTCTECGKNFAQKTNLLCH 164

Query: 143 L 143
           L
Sbjct: 165 L 165

May be involved in transcriptional regulation.

Xenopus laevis (taxid: 8355)

>sp|P08045|XFIN_XENLA Zinc finger protein Xfin OS=Xenopus laevis PE=1 SV=1

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 4/114 (3%)

Query: 32   GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTG 91
            G++ + C EC  SF    AL +H +   +    +P+PC  C + F+ KS LA H + HTG
Sbjct: 1160 GEQPYTCKECGKSFSQSSALVKHVR---IHTGEKPYPCSTCGKSFIQKSDLAKHQRIHTG 1216

Query: 92   ERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLT 145
            E+  TC +C + F  ++ +V+H +  H   R + C+ C KGF +KS L  H+ T
Sbjct: 1217 EKPYTCTVCGKKFIDRSSVVKHSRT-HTGERPYKCNECTKGFVQKSDLVKHMRT 1269

Binds to poly-G sequences in RNA. May function in post-translational regulation processes.

Xenopus laevis (taxid: 8355)

>sp|Q8JZL0|ZN467_MOUSE Zinc finger protein 467 OS=Mus musculus GN=Znf467 PE=1 SV=1

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 17  FLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF 76
           F  G  L  H     G++ F C +C   FG+   L  H +        RPF C  C +RF
Sbjct: 439 FAHGQHLARHRRVHTGERPFACAQCGRRFGSRPNLVAHSR---AHSGARPFACAQCGRRF 495

Query: 77  LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRK 136
             KSHL  H   HTG R   C +C + F SK +LVRH +  H   R F+C  C K F RK
Sbjct: 496 SRKSHLGRHQAVHTGSRPHACAVCARCFSSKTNLVRH-QAIHTGSRPFSCPQCAKSFSRK 554

Query: 137 SYLKVH 142
           ++L  H
Sbjct: 555 THLVRH 560

Transcription factor that promotes adipocyte differentiation and suppresses osteoblast differentiation in the bone marrow. Enhances the osteoclast-supporting ability of stromal cells. Binds with STAT3 the consensus sequence 5'-CTTCTGGGAAGA-3' of the acute phase response element (APRE). Transactivates several promoters including FOS, OSM and PPARG. Recruits a histone deacetylase complex.

Mus musculus (taxid: 10090)

>sp|Q5RJR4|ZN467_RAT Zinc finger protein 467 OS=Rattus norvegicus GN=Znf467 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 17  FLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF 76
           F  G  L  H     G++ F C +C   FG+   L  H +        RPF C  C +RF
Sbjct: 439 FAHGQHLARHRRVHTGERPFACAQCGRRFGSRPNLVAHSR---AHSGARPFACAQCGRRF 495

Query: 77  LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRK 136
             KSHL  H   HTG R   C +C + F SK +LVRH +  H   R F+C  C K F RK
Sbjct: 496 SRKSHLGRHQAVHTGSRPHACAVCARCFSSKTNLVRH-QAIHTGSRPFSCPQCAKSFSRK 554

Query: 137 SYLKVH 142
           ++L  H
Sbjct: 555 THLVRH 560

Transcription factor that promotes adipocyte differentiation and suppresses osteoblast differentiation in the bone marrow. Enhances the osteoclast-supporting ability of stromal cells. Binds with STAT3 the consensus sequence 5'-CTTCTGGGAAGA-3' of the acute phase response element (APRE). Transactivates several promoters including FOS, OSM and PPARG. Recruits a histone deacetylase complex.

Rattus norvegicus (taxid: 10116)

>sp|Q5EBL2|ZN628_HUMAN Zinc finger protein 628 OS=Homo sapiens GN=ZNF628 PE=2 SV=2

 Score = 82.0 bits (201), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 4/122 (3%)

Query: 24  EAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLA 83
           + H+    G++ + C EC  +F     L RH+   H+    RP  C +C + F   S+L 
Sbjct: 522 QYHLRLHSGERPYACGECGKAFRNTSCLRRHR---HVHTGERPHACGVCGKSFAQTSNLR 578

Query: 84  YHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHL 143
            H + HTGER   C LC ++F   ++L+ H +  H   R FTC +C +GF   +YL+ HL
Sbjct: 579 QHQRVHTGERPFRCPLCPKTFTHSSNLLLHQR-THSAERPFTCPICGRGFVMAAYLQRHL 637

Query: 144 LT 145
            T
Sbjct: 638 RT 639

Transcription activator. Binds DNA on GT-box consensus sequence 5'-TTGGTT-3'.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	230
427794703	207	hypothetical protein, partial [Rhipiceph	0.543	0.603	0.410	4e-17
328702988	599	PREDICTED: zinc finger protein 271-like	0.582	0.223	0.375	1e-16
270012284	231	hypothetical protein TcasGA2_TC006407 [T	0.539	0.536	0.387	1e-16
326427910	705	zinc finger protein [Salpingoeca sp. ATC	0.526	0.171	0.384	2e-16
432952026	590	PREDICTED: oocyte zinc finger protein Xl	0.547	0.213	0.376	2e-16
348579138	758	PREDICTED: zinc finger protein 282-like	0.465	0.141	0.396	2e-16
444514076	549	Zinc finger protein 717 [Tupaia chinensi	0.543	0.227	0.379	2e-16
321458861	524	putative GFI-Pag-sens-A protein [Daphnia	0.556	0.244	0.371	4e-16
328701308	598	PREDICTED: zinc finger protein 665-like	0.530	0.204	0.380	4e-16
194749889	979	GF24085 [Drosophila ananassae] gi|190624	0.626	0.147	0.322	4e-16

>gi|427794703|gb|JAA62803.1| hypothetical protein, partial [Rhipicephalus pulchellus]

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 71/129 (55%), Gaps = 4/129 (3%)

Query: 17  FLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF 76
           F    KL AH+ T  G++ + C  C+ SF    AL  H +        RPF CD C+  F
Sbjct: 19  FTENSKLVAHLRTHTGERPYSCAHCNASFSVSGALKTHMR---THTGERPFSCDHCDASF 75

Query: 77  LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRK 136
           L K+HL  H++THTGER ++C  C  SF  KA L+ HM+  H   R F+C  CNK F +K
Sbjct: 76  LQKTHLITHMRTHTGERPLSCDHCNASFAQKAHLISHMR-IHTGERPFSCDQCNKSFSQK 134

Query: 137 SYLKVHLLT 145
            +L  H+ T
Sbjct: 135 PHLINHMRT 143

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328702988|ref|XP_001943799.2| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 7/141 (4%)

Query: 5   FILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISL 64
           F  D  NK+   F    KL AH  T  G+K + CD CD SF  +  L  H++        
Sbjct: 121 FPCDVCNKS---FSENSKLTAHKRTHTGEKPYPCDVCDKSFSQNGTLIVHRR---THTGE 174

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSF 124
           +P+PCD+C++ F + S L  H +THTGE+   C +C +SF S +DL  H K  H   + +
Sbjct: 175 KPYPCDVCDKWFSDNSQLTIHKRTHTGEKPYPCDVCDRSFNSNSDLTVH-KRIHTGEKPY 233

Query: 125 TCHLCNKGFFRKSYLKVHLLT 145
            C++C+K F R ++L VH  T
Sbjct: 234 PCYVCDKSFRRNAHLTVHKRT 254

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270012284|gb|EFA08732.1| hypothetical protein TcasGA2_TC006407 [Tribolium castaneum]

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 5/129 (3%)

Query: 23  LEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHL 82
           LE H+ T  G++ F+CD CD  F    +L  HK+   +   LRP+ CD+CE++F  +S+L
Sbjct: 108 LEVHLRTHTGERPFKCDVCDKRFTQKSSLNTHKR---VHTGLRPYACDVCEKKFAVRSYL 164

Query: 83  AYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH 142
             H  +H  +  ++C  C   F +K+ LV+H+KG H N R F C +C + F R SYL  H
Sbjct: 165 VAHRWSHVSD-GLSCPECNAGFSTKSQLVQHVKG-HSNRRGFQCEVCQRRFVRDSYLIRH 222

Query: 143 LLTIHMQPA 151
           L  +H   A
Sbjct: 223 LNKVHKNNA 231

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326427910|gb|EGD73480.1| zinc finger protein [Salpingoeca sp. ATCC 50818]

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 4/125 (3%)

Query: 23  LEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHL 82
           L  H+ T  G+K F CD+C+ SF     L RH++   +    +PF C  C ++    S L
Sbjct: 90  LVVHLRTHTGEKPFVCDKCNKSFTKKSHLTRHRK---IHTGEKPFSCGFCGKKHARMSDL 146

Query: 83  AYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH 142
             H++THTGER  +C +C +SF + +  VR  +  H + R F+C LC+K F  K  LK H
Sbjct: 147 KVHLRTHTGERPYSCSICGKSFITSSH-VRMHERTHDDARHFSCPLCSKPFKTKPGLKQH 205

Query: 143 LLTIH 147
           L T H
Sbjct: 206 LKTGH 210

Source: Salpingoeca sp. ATCC 50818

Species: Salpingoeca sp. ATCC 50818

Genus: Salpingoeca

Family: Salpingoecidae

Order: Choanoflagellida

Superkingdom: Eukaryota

>gi|432952026|ref|XP_004084940.1| PREDICTED: oocyte zinc finger protein XlCOF6-like [Oryzias latipes]

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 4/130 (3%)

Query: 16  FFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQR 75
            F     L+ H  T  G+K F C+ C  +F   ++L  H +        +PF C +C++R
Sbjct: 429 LFSTSSDLKIHTRTHTGEKPFSCEICKKAFIQARSLTDHMR---THTGEKPFICRVCQKR 485

Query: 76  FLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFR 135
           F++++ L  H++THTGER  TC +C +SF S +DL  HM+  H   R F C +C K F +
Sbjct: 486 FMHRAALNVHLRTHTGERPFTCEVCQKSFISTSDLKSHMRT-HTGERPFLCTVCEKTFIK 544

Query: 136 KSYLKVHLLT 145
            S+LKVH+ T
Sbjct: 545 SSHLKVHIRT 554

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348579138|ref|XP_003475338.1| PREDICTED: zinc finger protein 282-like [Cavia porcellus]

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 4/111 (3%)

Query: 33  DKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGE 92
           ++ ++C EC+ SF  H  L RH+     +   RP+ C  CE+ +  K HL  H + HTGE
Sbjct: 629 ERPYECAECEKSFNCHSGLIRHQMTHRGE---RPYKCSECEKTYSRKEHLQNHQRLHTGE 685

Query: 93  RDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHL 143
           R   C LC +SF  K +L++H +  H   R +TC  CNK F  K  LK HL
Sbjct: 686 RPFQCALCGKSFIRKQNLLKHQR-IHTGERPYTCGECNKSFRYKESLKDHL 735

Source: Cavia porcellus

Species: Cavia porcellus

Genus: Cavia

Family: Caviidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|444514076|gb|ELV10526.1| Zinc finger protein 717 [Tupaia chinensis]

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 4/129 (3%)

Query: 17  FLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF 76
           F     L  H  T  G+K ++C+EC  SF     L RH++   +    +P+ C+ C++ F
Sbjct: 304 FYRKSDLTVHQRTHTGEKPYECNECRKSFNQKSNLSRHQR---IHTGEKPYECNRCKKSF 360

Query: 77  LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRK 136
             KS L +H +THTGER   C  C +SFY K+DL  H K  H   + + C++C K F++K
Sbjct: 361 CQKSDLTFHQRTHTGERPHECKECRKSFYKKSDLTVH-KRTHTGEKPYECNVCRKTFYQK 419

Query: 137 SYLKVHLLT 145
           S L VH  T
Sbjct: 420 SKLTVHQRT 428

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|321458861|gb|EFX69922.1| putative GFI-Pag-sens-A protein [Daphnia pulex]

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 70/132 (53%), Gaps = 4/132 (3%)

Query: 16  FFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQR 75
            F +G  LE H+ T H  +SFQC +C  +F     L  H    H D   RP+PC  C +R
Sbjct: 365 VFEIGASLEQHLATHHASRSFQCKQCGKTFKRSSTLSTHLLI-HSDT--RPYPCQYCGKR 421

Query: 76  FLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFR 135
           F  KS +  H   HTGE+   C +C ++F   ++L+ HM+ +H   + F C LC+K F R
Sbjct: 422 FHQKSDMKKHTYIHTGEKPHKCIVCSKAFSQSSNLITHMR-KHTGYKPFACGLCDKAFQR 480

Query: 136 KSYLKVHLLTIH 147
           K  L+ H  + H
Sbjct: 481 KVDLRRHRDSQH 492

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328701308|ref|XP_001950404.2| PREDICTED: zinc finger protein 665-like [Acyrthosiphon pisum]

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 4/126 (3%)

Query: 17  FLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF 76
           F +   L+ H TT  G+K FQCD+CD +F     L RH +        +P+ CD C++ F
Sbjct: 359 FALKRTLKMHTTTHTGEKPFQCDDCDRAFSQKSHLTRHTR---THAGEKPYKCDDCDKAF 415

Query: 77  LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRK 136
             KS L  H++THTGE+   C  C Q+F  K+ L+RH K  H   + + C+ C++ F +K
Sbjct: 416 SWKSLLTEHIRTHTGEKPYKCNSCEQAFSYKSSLIRH-KMIHTGEKPYKCNTCDQAFSQK 474

Query: 137 SYLKVH 142
           S+L +H
Sbjct: 475 SHLTIH 480

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194749889|ref|XP_001957368.1| GF24085 [Drosophila ananassae] gi|190624650|gb|EDV40174.1| GF24085 [Drosophila ananassae]

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 5/149 (3%)

Query: 17  FLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF 76
           F + ++L  H      +K+++C+EC M   T Q L  H +    D   R + CD C++ F
Sbjct: 686 FRLKMRLSEHQLRHRTEKAYKCEECSMPLATKQDLSLHMRHHKND---RRYKCDKCDKGF 742

Query: 77  LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRK 136
           +  S L+ HV+ HTGE+   C +C ++F ++ +LV H +  HL  +   C LC+K F RK
Sbjct: 743 VRSSDLSIHVRIHTGEKPYACDICGKAFRARQNLVVHRR-THLGDKPIQCELCDKRFARK 801

Query: 137 SYLKVHLLTIHMQPADEAQNAIHRCYACR 165
             ++VH+   H      + +A  R Y+ R
Sbjct: 802 IDMRVHMRR-HTGEKPYSCDACTRGYSSR 829

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	230
FB|FBgn0050431	418	CG30431 [Drosophila melanogast	0.621	0.342	0.355	3.3e-21
UNIPROTKB|Q7Z7K2	595	ZNF467 "Zinc finger protein 46	0.586	0.226	0.415	1.8e-20
ZFIN|ZDB-GENE-030131-4589	449	zgc:174263 "zgc:174263" [Danio	0.508	0.260	0.414	2.8e-20
ZFIN|ZDB-GENE-080305-5	320	zgc:174275 "zgc:174275" [Danio	0.521	0.375	0.4	7.2e-20
UNIPROTKB|F1SK10	740	ZNF366 "Uncharacterized protei	0.526	0.163	0.388	9.8e-20
UNIPROTKB|E1BCS0	742	ZNF366 "Uncharacterized protei	0.526	0.163	0.388	9.9e-20
RGD|2322904	743	Zfp366 "zinc finger protein 36	0.526	0.162	0.388	9.9e-20
UNIPROTKB|Q8N895	744	ZNF366 "Zinc finger protein 36	0.526	0.162	0.388	9.9e-20
ZFIN|ZDB-GENE-030131-5253	602	zgc:162936 "zgc:162936" [Danio	0.643	0.245	0.356	1.4e-19
UNIPROTKB|F1NSX7	739	ZNF366 "Uncharacterized protei	0.526	0.163	0.388	2.1e-19

FB|FBgn0050431 CG30431 [Drosophila melanogaster (taxid:7227)]

 Score = 252 (93.8 bits), Expect = 3.3e-21, P = 3.3e-21
 Identities = 54/152 (35%), Positives = 84/152 (55%)

Query:    17 FLMGLKLEAHITTVHG--DKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQ 74
             F    +L+ H+T VHG  +  +QC+EC  +F +  +L  H +  H   + RPF C  C++
Sbjct:   241 FTRNFQLKLHMTAVHGMGEMRYQCEECRKNFASRHSLRYHVKSVHS--TERPFGCQHCDR 298

Query:    75 RFLNKSHLAYHVKTHTGE---RDVTCGLCFQSFYSKADLVRHMKGRHLNI-RSFTCHLCN 130
             RF+ ++ L  H++THTGE   R   C  C +S+ +K+DL  HM+  + N+ R F C  C+
Sbjct:   299 RFILRTQLLSHLRTHTGEAKPRIFECQRCSKSWPTKSDLRTHMRSHNPNMERPFKCDRCS 358

Query:   131 KGFFRKSYLKVHLLTIHMQPADEAQNAIHRCY 162
             K FF + +L  HLL +H      A     +CY
Sbjct:   359 KAFFTRGHLNSHLL-VHTGEKPFACEYCDKCY 389

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

UNIPROTKB|Q7Z7K2 ZNF467 "Zinc finger protein 467" [Homo sapiens (taxid:9606)]

 Score = 250 (93.1 bits), Expect = 1.8e-20, P = 1.8e-20
 Identities = 59/142 (41%), Positives = 74/142 (52%)

Query:    17 FLMGLKLEAHITTVH-GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQR 75
             F  G  L  H   VH G++ F C +CD  FG+   L  H +  H     RPF C  C +R
Sbjct:   440 FSHGQHLARH-PRVHTGERPFACTQCDRRFGSRPNLVAHSRA-HS--GARPFACAQCGRR 495

Query:    76 FLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFR 135
             F  KSHL  H   HTG R   C +C +SF SK +LVRH +  H   R F+C  C K F R
Sbjct:   496 FSRKSHLGRHQAVHTGSRPHACAVCARSFSSKTNLVRH-QAIHTGSRPFSCPQCGKSFSR 554

Query:   136 KSYLKVHLLTIHMQPADEAQNA 157
             K++L  H L IH + A  A +A
Sbjct:   555 KTHLVRHQL-IHGEAAHAAPDA 575

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-030131-4589 zgc:174263 "zgc:174263" [Danio rerio (taxid:7955)]

 Score = 245 (91.3 bits), Expect = 2.8e-20, P = 2.8e-20
 Identities = 51/123 (41%), Positives = 71/123 (57%)

Query:    26 HITTVHG-DKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAY 84
             H   +H  +K F CDEC  SF   Q+L  H++  H    LRPF C LC + +++K +L  
Sbjct:   158 HHYRIHTVEKPFPCDECGKSFIHKQSLKNHQKV-HS--GLRPFVCTLCGKSYIHKDNLTD 214

Query:    85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLL 144
             H++ HTGE+  TC LC +SF  K  L+ HMK  H  ++ FTC  C + F  K  LK+H+ 
Sbjct:   215 HMRIHTGEKPHTCKLCGKSFTHKGSLLHHMK-IHTGLKPFTCRQCGRHFTHKGNLKIHI- 272

Query:   145 TIH 147
              IH
Sbjct:   273 RIH 275

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-080305-5 zgc:174275 "zgc:174275" [Danio rerio (taxid:7955)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 50/125 (40%), Positives = 68/125 (54%)

Query:    23 LEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHL 82
             L  H++   G+K F+C +C  SF    +L RH +  H     +PF C  C + FL  SHL
Sbjct:   164 LNYHMSIHTGEKPFKCTQCGKSFTCSSSLNRHMRI-HT--GEKPFACTQCGKSFLRSSHL 220

Query:    83 AYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH 142
               H++ HTGER  TC  C++SF   + L RHM+  H   + FTC  C K F R S+L  H
Sbjct:   221 NRHMRIHTGERLFTCTQCWKSFTCSSHLYRHMR-IHTGEKPFTCTQCEKSFIRSSHLNRH 279

Query:   143 LLTIH 147
             +  IH
Sbjct:   280 M-RIH 283

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1SK10 ZNF366 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 245 (91.3 bits), Expect = 9.8e-20, P = 9.8e-20
 Identities = 49/126 (38%), Positives = 69/126 (54%)

Query:    22 KLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSH 81
             +L+ H+TT  G   + C ECD +F     L  H   KH DI  RP+ C  C   F+   H
Sbjct:   379 QLKRHLTTHRGPIQYSCSECDKTFQYPSQLQNHMM-KHKDI--RPYICSECGMEFVQPHH 435

Query:    82 LAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKV 141
             L  H  TH G ++  CG+C + F   A++ RH+   H NIR++ CHLC K F +K  LK 
Sbjct:   436 LKQHSLTHKGVKEHKCGICGREFTLLANMKRHVL-IHTNIRAYQCHLCYKSFVQKQTLKA 494

Query:   142 HLLTIH 147
             H++ +H
Sbjct:   495 HMI-VH 499

GO:0043627 "response to estrogen stimulus" evidence=IEA

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000988 "protein binding transcription factor activity" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E1BCS0 ZNF366 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 245 (91.3 bits), Expect = 9.9e-20, P = 9.9e-20
 Identities = 49/126 (38%), Positives = 69/126 (54%)

Query:    22 KLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSH 81
             +L+ H+TT  G   + C ECD +F     L  H   KH DI  RP+ C  C   F+   H
Sbjct:   381 QLKRHLTTHRGPIQYNCSECDKTFQYPSQLQNHMM-KHKDI--RPYICSECGMEFVQPHH 437

Query:    82 LAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKV 141
             L  H  TH G ++  CG+C + F   A++ RH+   H NIR++ CHLC K F +K  LK 
Sbjct:   438 LKQHSLTHKGVKEHKCGICGREFTLLANMKRHVL-IHTNIRAYQCHLCYKSFVQKQTLKA 496

Query:   142 HLLTIH 147
             H++ +H
Sbjct:   497 HMI-VH 501

GO:0043627 "response to estrogen stimulus" evidence=IEA

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000988 "protein binding transcription factor activity" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

RGD|2322904 Zfp366 "zinc finger protein 366" [Rattus norvegicus (taxid:10116)]

 Score = 245 (91.3 bits), Expect = 9.9e-20, P = 9.9e-20
 Identities = 49/126 (38%), Positives = 69/126 (54%)

Query:    22 KLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSH 81
             +L+ H+TT  G   + C ECD +F     L  H   KH DI  RP+ C  C   F+   H
Sbjct:   376 QLKRHLTTHRGPIQYNCSECDKTFQYPSQLQNHMM-KHKDI--RPYICSECGMEFVQPHH 432

Query:    82 LAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKV 141
             L  H  TH G ++  CG+C + F   A++ RH+   H NIR++ CHLC K F +K  LK 
Sbjct:   433 LKQHSLTHKGVKEHKCGICGREFTLLANMKRHVL-IHTNIRAYQCHLCYKSFVQKQTLKA 491

Query:   142 HLLTIH 147
             H++ +H
Sbjct:   492 HMI-VH 496

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0000988 "protein binding transcription factor activity" evidence=IEA;ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=IEA;ISO

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=IEA;ISO

GO:0043627 "response to estrogen stimulus" evidence=IEA;ISO

UNIPROTKB|Q8N895 ZNF366 "Zinc finger protein 366" [Homo sapiens (taxid:9606)]

 Score = 245 (91.3 bits), Expect = 9.9e-20, P = 9.9e-20
 Identities = 49/126 (38%), Positives = 69/126 (54%)

Query:    22 KLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSH 81
             +L+ H+TT  G   + C ECD +F     L  H   KH DI  RP+ C  C   F+   H
Sbjct:   379 QLKRHLTTHRGPIQYNCSECDKTFQYPSQLQNHMM-KHKDI--RPYICSECGMEFVQPHH 435

Query:    82 LAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKV 141
             L  H  TH G ++  CG+C + F   A++ RH+   H NIR++ CHLC K F +K  LK 
Sbjct:   436 LKQHSLTHKGVKEHKCGICGREFTLLANMKRHVL-IHTNIRAYQCHLCYKSFVQKQTLKA 494

Query:   142 HLLTIH 147
             H++ +H
Sbjct:   495 HMI-VH 499

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0000988 "protein binding transcription factor activity" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0030331 "estrogen receptor binding" evidence=IDA

GO:0043627 "response to estrogen stimulus" evidence=IDA

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

ZFIN|ZDB-GENE-030131-5253 zgc:162936 "zgc:162936" [Danio rerio (taxid:7955)]

 Score = 242 (90.2 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 57/160 (35%), Positives = 82/160 (51%)

Query:    22 KLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSH 81
             KL+ H+T   G+K F C++C  SF   + L  H +  H     RPF C  C + F++K+ 
Sbjct:   107 KLKNHMTIHTGEKPFTCEQCGKSFNYKENLNYHMRV-HT--GERPFSCKECGKSFVHKAA 163

Query:    82 LAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKV 141
             L YH + HTGE+  TC LC +S+  K +L  H +G H   R FTC  C K F +K  L  
Sbjct:   164 LKYHTRVHTGEKPFTCELCGKSYVHKGNLNYHKRG-HTGERPFTCEQCGKSFVQKHKLNN 222

Query:   142 HLLTIHMQPADEAQNAIHRC---YACRCAGHCLQIGTHSG 178
             H+L+ H     E      +C   ++C+   H   +  HSG
Sbjct:   223 HILS-H---TGEKPFKCLQCGTGFSCKANLHT-HMKVHSG 257

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1NSX7 ZNF366 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 242 (90.2 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 49/126 (38%), Positives = 69/126 (54%)

Query:    22 KLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSH 81
             +L+ H+TT  G   + C ECD +F     L  H   KH DI  RP+ C  C   F+   H
Sbjct:   374 QLKRHLTTHRGPIQYNCTECDKTFQYPSQLQNHMM-KHKDI--RPYICTECGMEFVQPHH 430

Query:    82 LAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKV 141
             L  H  TH G ++  CG+C + F   A++ RH+   H NIR++ CHLC K F +K  LK 
Sbjct:   431 LKQHSLTHKGVKEHKCGICGREFTLLANMKRHVL-IHTNIRAYQCHLCFKSFVQKQTLKA 489

Query:   142 HLLTIH 147
             H++ +H
Sbjct:   490 HMI-VH 494

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000988 "protein binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=IEA

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=IEA

GO:0043627 "response to estrogen stimulus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	230
KOG2462|consensus	279		99.96
KOG2462|consensus	279		99.96
KOG1074|consensus	958		99.92
KOG3608|consensus	467		99.91
KOG3608|consensus	467		99.86
KOG3623|consensus	1007		99.79
KOG1074|consensus	958		99.78
KOG3576|consensus	267		99.74
KOG3576|consensus	267		99.71
KOG3623|consensus	1007		99.49
PLN03086	567	PRLI-interacting factor K; Provisional	99.36
PHA00733	128	hypothetical protein	99.25
PLN03086	567	PRLI-interacting factor K; Provisional	99.19
PHA00733	128	hypothetical protein	99.17
KOG3993|consensus	500		99.01
PHA02768	55	hypothetical protein; Provisional	98.82
KOG3993|consensus	500		98.81
PHA02768	55	hypothetical protein; Provisional	98.81
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.66
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.62
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.42
PHA00616	44	hypothetical protein	98.39
PHA00732	79	hypothetical protein	98.27
PHA00732	79	hypothetical protein	98.25
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.17
PHA00616	44	hypothetical protein	98.17
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.93
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.84
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.82
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.77
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.66
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.6
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.56
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.54
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.45
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.42
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.33
KOG2231|consensus	669		97.3
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.06
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.75
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.68
smart00355	26	ZnF_C2H2 zinc finger.	96.68
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.66
KOG2231|consensus	669		96.57
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.56
KOG2482|consensus	423		96.51
KOG4173|consensus	253		96.42
KOG4173|consensus	253		96.32
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.24
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.21
KOG1146|consensus	1406		96.21
KOG1146|consensus	1406		96.01
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.84
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.84
PRK04860	160	hypothetical protein; Provisional	95.71
KOG2482|consensus	423		95.69
PRK04860	160	hypothetical protein; Provisional	95.66
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.63
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.45
KOG2785|consensus	390		94.42
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.26
KOG2785|consensus	390		94.22
KOG2893|consensus	341		93.68
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.33
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	92.76
COG5048	467	FOG: Zn-finger [General function prediction only]	92.68
COG4049	65	Uncharacterized protein containing archaeal-type C	91.97
KOG2893|consensus	341		91.5
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	91.02
COG5048	467	FOG: Zn-finger [General function prediction only]	90.91
COG4049	65	Uncharacterized protein containing archaeal-type C	90.7
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	85.44
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	85.33
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	85.09
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	84.86
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	84.73
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	84.7
KOG2186|consensus	276		84.64
PF12907	40	zf-met2: Zinc-binding	84.29
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	84.15
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	82.58
KOG2186|consensus	276		82.36
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	81.91
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	80.67

>KOG2462|consensus

Probab=99.96  E-value=7.3e-31  Score=197.67  Aligned_cols=138  Identities=28%  Similarity=0.577  Sum_probs=128.8

Q ss_pred             CCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHH
Q psy14799         33 DKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVR  112 (230)
Q Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  112 (230)
                      ...|+|+.|++.+.+.++|.+|.++|......+.+.|.+||+.|.+...|..|+++|+  -+.+|.+||+.|...+-|+.
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhc
Confidence            3459999999999999999999999998887788999999999999999999999997  57899999999999999999


Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCcccccccccCCccccccccCCccc
Q psy14799        113 HMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHP  192 (230)
Q Consensus       113 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~~~~C~~~f~~~~~l~  192 (230)
                      |+| .|+|+|||.|+.|++.|.++++|+.| +.+|.+.++|.|.                       .|+|+|..++.|.
T Consensus       206 HiR-THTGEKPF~C~hC~kAFADRSNLRAH-mQTHS~~K~~qC~-----------------------~C~KsFsl~SyLn  260 (279)
T KOG2462|consen  206 HIR-THTGEKPFSCPHCGKAFADRSNLRAH-MQTHSDVKKHQCP-----------------------RCGKSFALKSYLN  260 (279)
T ss_pred             ccc-cccCCCCccCCcccchhcchHHHHHH-HHhhcCCccccCc-----------------------chhhHHHHHHHHH
Confidence            999 99999999999999999999999999 7889999999986                       8999999999999


Q ss_pred             ccccc
Q psy14799        193 CHLLT  197 (230)
Q Consensus       193 ~H~~~  197 (230)
                      +|...
T Consensus       261 KH~ES  265 (279)
T KOG2462|consen  261 KHSES  265 (279)
T ss_pred             Hhhhh
Confidence            99874

>KOG2462|consensus

Probab=99.96  E-value=8.8e-30  Score=191.87  Aligned_cols=130  Identities=28%  Similarity=0.525  Sum_probs=122.4

Q ss_pred             hhhhhhhhccCHHHHHHHHHhhcC---CCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHh
Q psy14799          9 YWNKNYFFFLMGLKLEAHITTVHG---DKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYH   85 (230)
Q Consensus         9 ~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H   85 (230)
                      -|++||+.+.+...|.+|.++|-.   .+.+.|+.|++.|.+...|+.|+++|..     +..|.+||+.|...+.|+-|
T Consensus       132 ~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l-----~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  132 KCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTL-----PCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             eccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCC-----CcccccccccccchHHhhcc
Confidence            466699999999999999999853   5679999999999999999999999874     59999999999999999999


Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHH
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      +|+|+||+||.|+.|++.|.++++|+.|++ .|.+.++|+|..|+++|...+-|.+|..
T Consensus       207 iRTHTGEKPF~C~hC~kAFADRSNLRAHmQ-THS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPHCGKAFADRSNLRAHMQ-THSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             cccccCCCCccCCcccchhcchHHHHHHHH-hhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            999999999999999999999999999999 9999999999999999999999999944

>KOG1074|consensus

Probab=99.92  E-value=4.2e-26  Score=193.42  Aligned_cols=75  Identities=35%  Similarity=0.627  Sum_probs=62.2

Q ss_pred             ccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCC----Cccccc---ccccccCChHHH
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNI----RSFTCH---LCNKGFFRKSYL  139 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~----~~~~C~---~C~~~f~~~~~l  139 (230)
                      ..|.+|.+...-.+.|+.|.++|+|++||+|.+|++.|.++.+|+.|+- .|...    .++.|+   +|.+.|...-.|
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~-vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMS-VHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhccc-ccccCccccccccCCchhhhcccccccccc
Confidence            7899999999999999999999999999999999999999999999998 66433    235565   566666665555


Q ss_pred             HHH
Q psy14799        140 KVH  142 (230)
Q Consensus       140 ~~H  142 (230)
                      ..|
T Consensus       685 pQh  687 (958)
T KOG1074|consen  685 PQH  687 (958)
T ss_pred             cce
Confidence            555

>KOG3608|consensus

Probab=99.91  E-value=5e-25  Score=170.70  Aligned_cols=187  Identities=24%  Similarity=0.397  Sum_probs=153.0

Q ss_pred             hhhhhhhccCHHHHHHHHHhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHh
Q psy14799         10 WNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTH   89 (230)
Q Consensus        10 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h   89 (230)
                      |..|-+.|.++..|++|+++|++++...|+.||..|.++..|--|.+....... .+|.|..|.+.|.+...|..|+..|
T Consensus       182 W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~-n~fqC~~C~KrFaTeklL~~Hv~rH  260 (467)
T KOG3608|consen  182 WAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNT-NSFQCAQCFKRFATEKLLKSHVVRH  260 (467)
T ss_pred             chhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcC-CchHHHHHHHHHhHHHHHHHHHHHh
Confidence            477889999999999999999999999999999999999999999986654433 5899999999999999999999988


Q ss_pred             cCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCc
Q psy14799         90 TGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGH  169 (230)
Q Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~  169 (230)
                      .  ..|+|+.|+.+....+.|..|++-.|...+||+|..|++.|.+.++|.+| ...|+ +..|.|..    +.|-..+.
T Consensus       261 v--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH-~~~HS-~~~y~C~h----~~C~~s~r  332 (467)
T KOG3608|consen  261 V--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKH-VQVHS-KTVYQCEH----PDCHYSVR  332 (467)
T ss_pred             h--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHH-HHhcc-ccceecCC----CCCcHHHH
Confidence            6  45999999999999999999999999999999999999999999999999 55887 55677653    22433332


Q ss_pred             cc-----cc-ccccC--------CccccccccCCccccccccccCCCCCC
Q psy14799        170 CL-----QI-GTHSG--------GICGSMWRVETWHPCHLLTERNRQPPY  205 (230)
Q Consensus       170 ~~-----~~-~~h~~--------~~C~~~f~~~~~l~~H~~~h~~~~~~~  205 (230)
                      +.     |+ .+|.+        ..|++.|++-.+|..|++.-|+=+-|+
T Consensus       333 ~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~Ps  382 (467)
T KOG3608|consen  333 TYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPS  382 (467)
T ss_pred             HHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCCC
Confidence            22     22 33323        377777777777777776665555443

>KOG3608|consensus

Probab=99.86  E-value=4.5e-22  Score=154.42  Aligned_cols=152  Identities=24%  Similarity=0.422  Sum_probs=116.9

Q ss_pred             hhhhhhhccCHHHHHHHHHhhcC--CCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHH
Q psy14799         10 WNKNYFFFLMGLKLEAHITTVHG--DKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVK   87 (230)
Q Consensus        10 C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~   87 (230)
                      |+-|+..|.++..|-.|++..+.  ..+|.|..|-+.|.+...|..|+..|-.     -|+|+.|+.+....++|.+|++
T Consensus       210 Cp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn-----~ykCplCdmtc~~~ssL~~H~r  284 (467)
T KOG3608|consen  210 CPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN-----CYKCPLCDMTCSSASSLTTHIR  284 (467)
T ss_pred             cchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh-----cccccccccCCCChHHHHHHHH
Confidence            66688888888888888876653  4578888888888888888888886654     3888888888888888888877


Q ss_pred             -HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhhcCC--CChhhhhhccCCC
Q psy14799         88 -THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHL--CNKGFFRKSYLKVHLLTIHMQ--PADEAQNAIHRCY  162 (230)
Q Consensus        88 -~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~--~~~~~c~~~~~C~  162 (230)
                       .|..++||+|+.|++.|.+.++|.+|.. .|+ +..|+|..  |..+|.+...+++|++.+|.+  +.+|.|-.   |.
T Consensus       285 ~rHs~dkpfKCd~Cd~~c~~esdL~kH~~-~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~---Cd  359 (467)
T KOG3608|consen  285 YRHSKDKPFKCDECDTRCVRESDLAKHVQ-VHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHC---CD  359 (467)
T ss_pred             hhhccCCCccccchhhhhccHHHHHHHHH-hcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeec---ch
Confidence             5667788888888888888888888888 787 55688877  888888888888888888843  45577665   44


Q ss_pred             CCCCCCccc
Q psy14799        163 ACRCAGHCL  171 (230)
Q Consensus       163 ~c~~~~~~~  171 (230)
                      .++.+...+
T Consensus       360 r~ft~G~~L  368 (467)
T KOG3608|consen  360 RFFTSGKSL  368 (467)
T ss_pred             hhhccchhH
Confidence            444444333

>KOG3623|consensus

Probab=99.79  E-value=3.9e-20  Score=155.37  Aligned_cols=77  Identities=23%  Similarity=0.407  Sum_probs=71.8

Q ss_pred             eecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCcccccc
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIG  174 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~  174 (230)
                      |.|+.|+++|...+.|.+|.. .|+|.+||+|.+|.+.|..+-.|..| ++.|.|++||.|.                  
T Consensus       895 yaCDqCDK~FqKqSSLaRHKY-EHsGqRPyqC~iCkKAFKHKHHLtEH-kRLHSGEKPfQCd------------------  954 (1007)
T KOG3623|consen  895 YACDQCDKAFQKQSSLARHKY-EHSGQRPYQCIICKKAFKHKHHLTEH-KRLHSGEKPFQCD------------------  954 (1007)
T ss_pred             chHHHHHHHHHhhHHHHHhhh-hhcCCCCcccchhhHhhhhhhhhhhh-hhhccCCCcchhh------------------
Confidence            889999999999999999998 89999999999999999999999999 8899999999986                  


Q ss_pred             cccCCccccccccCCccccccc
Q psy14799        175 THSGGICGSMWRVETWHPCHLL  196 (230)
Q Consensus       175 ~h~~~~C~~~f~~~~~l~~H~~  196 (230)
                           .|+|+|...+....||.
T Consensus       955 -----KClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  955 -----KCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             -----hhhhhcccccchHhhhc
Confidence                 89999999999999995

>KOG1074|consensus

Probab=99.78  E-value=4.6e-20  Score=157.08  Aligned_cols=94  Identities=22%  Similarity=0.451  Sum_probs=79.8

Q ss_pred             ceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCccccc
Q psy14799         94 DVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQI  173 (230)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~  173 (230)
                      +-+|-+|.++..-.++|+-|.+ .|+|++||+|.+||+.|.++.+|+.| ..+|....+..-.  ..|+.-+        
T Consensus       605 PNqCiiC~rVlSC~saLqmHyr-tHtGERPFkCKiCgRAFtTkGNLkaH-~~vHka~p~~R~q--~ScP~~~--------  672 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYR-THTGERPFKCKICGRAFTTKGNLKAH-MSVHKAKPPARVQ--FSCPSTF--------  672 (958)
T ss_pred             ccceeeeeecccchhhhhhhhh-cccCcCccccccccchhccccchhhc-ccccccCcccccc--ccCCchh--------
Confidence            4789999999999999999999 99999999999999999999999999 8889777665521  2222111        


Q ss_pred             ccccCCccccccccCCccccccccccCCCCCC
Q psy14799        174 GTHSGGICGSMWRVETWHPCHLLTERNRQPPY  205 (230)
Q Consensus       174 ~~h~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  205 (230)
                            +|-+.|.+...|..|+++|.+.+-|.
T Consensus       673 ------ic~~kftn~V~lpQhIriH~~~~~s~  698 (958)
T KOG1074|consen  673 ------ICQKKFTNAVTLPQHIRIHLGGQISN  698 (958)
T ss_pred             ------hhcccccccccccceEEeecCCCCCC
Confidence                  99999999999999999999776543

>KOG3576|consensus

Probab=99.74  E-value=4e-19  Score=128.25  Aligned_cols=123  Identities=25%  Similarity=0.423  Sum_probs=109.4

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHH
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      ..|.|.+|++.|.-...|.+|++-|...+.+-|..||+.|.+..+|++|++ .|++.+||+|..|++.|+..-.|..|++
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~r-thtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTR-THTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhc-cccCccccchhhhhHHHHhhccHHHHHH
Confidence            359999999999999999999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             hhcCCCChhhhhhccCCCCCCCCCcccccccccCCccccccccCCccccccccccCC
Q psy14799        145 TIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERNR  201 (230)
Q Consensus       145 ~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~~~~C~~~f~~~~~l~~H~~~h~~~  201 (230)
                      .+|.-...|.-.             ....+.+.|+.||.+-.....+..|++.|+..
T Consensus       195 kvhgv~~~yayk-------------err~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  195 KVHGVQHQYAYK-------------ERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             HHcCchHHHHHH-------------HhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            999766655432             12235677789999999999999999999743

>KOG3576|consensus

Probab=99.71  E-value=4.5e-18  Score=122.89  Aligned_cols=115  Identities=30%  Similarity=0.561  Sum_probs=103.5

Q ss_pred             CCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHH
Q psy14799         33 DKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVR  112 (230)
Q Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  112 (230)
                      ...|.|.+|++.|.-...|.+|++-|...   +.+.|..||+.|...-+|++|+++|+|.+||+|..|++.|...-.|..
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~v---kr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDV---KRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHH---HHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHH
Confidence            34599999999999999999999977666   789999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcC----------CCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799        113 HMKGRHL----------NIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       113 H~~~~H~----------~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      |.+..|.          ..+.|.|..||.+-.....+..|+...|...
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            9998885          4467999999999999999999977777544

>KOG3623|consensus

Probab=99.49  E-value=9e-15  Score=123.55  Aligned_cols=79  Identities=30%  Similarity=0.610  Sum_probs=76.2

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHH
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      -.|.|+.|++.|...++|.+|.-.|+|.+||+|.+|.+.|..+-.|..|+| .|.|+|||+|..|++.|.....+.+||.
T Consensus       893 gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkR-LHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  893 GMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKR-LHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             ccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhh-hccCCCcchhhhhhhhcccccchHhhhc
Confidence            569999999999999999999999999999999999999999999999999 9999999999999999999999999953

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.36  E-value=9e-13  Score=111.51  Aligned_cols=102  Identities=21%  Similarity=0.515  Sum_probs=71.6

Q ss_pred             ccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceeccccccccc----------
Q psy14799         36 FQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFY----------  105 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------  105 (230)
                      +.|+.|+..|. ...|..|+.++|     +++.|+ |+..+ ....|..|+.+|.+.+++.|+.|++.+.          
T Consensus       454 ~~C~~Cgk~f~-~s~LekH~~~~H-----kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d  525 (567)
T PLN03086        454 VHCEKCGQAFQ-QGEMEKHMKVFH-----EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRD  525 (567)
T ss_pred             ccCCCCCCccc-hHHHHHHHHhcC-----CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhh
Confidence            56777877775 466778877764     357777 77644 4567777877777777888888877774          


Q ss_pred             CHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcC
Q psy14799        106 SKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       106 ~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      ....|..|.. .. +.+++.|..||+.+... ++..|+...|.
T Consensus       526 ~~s~Lt~HE~-~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        526 RLRGMSEHES-IC-GSRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             hhhhHHHHHH-hc-CCcceEccccCCeeeeh-hHHHHHHHhhc
Confidence            1346777776 43 66777887787777665 67777666663

>PHA00733 hypothetical protein

Probab=99.25  E-value=1.3e-11  Score=85.93  Aligned_cols=82  Identities=21%  Similarity=0.308  Sum_probs=59.8

Q ss_pred             CCcccccccccccCCHHHHHHh--HH---HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHH
Q psy14799         64 LRPFPCDLCEQRFLNKSHLAYH--VK---THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSY  138 (230)
Q Consensus        64 ~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~  138 (230)
                      .+++.|.+|...|.....|..+  +.   .+.++++|.|+.|++.|.+...|..|++ .|  ..+|.|+.|++.|.....
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r-~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIR-YT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHh-cC--CcCccCCCCCCccCCHHH
Confidence            3667777777777766655554  11   2334678888888888888888888887 55  346888888888888888


Q ss_pred             HHHHHHhhcC
Q psy14799        139 LKVHLLTIHM  148 (230)
Q Consensus       139 l~~H~~~~H~  148 (230)
                      |..|+...|.
T Consensus       115 L~~H~~~~h~  124 (128)
T PHA00733        115 TLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC
Confidence            8888777663

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.19  E-value=3e-11  Score=102.43  Aligned_cols=143  Identities=17%  Similarity=0.340  Sum_probs=101.8

Q ss_pred             hhhhhhhccCHHHHHHHHHhhcCCCcccccc--cccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHH
Q psy14799         10 WNKNYFFFLMGLKLEAHITTVHGDKSFQCDE--CDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVK   87 (230)
Q Consensus        10 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~   87 (230)
                      |+.|..... ...|..|..... ...-.|+.  |+..|.. ..+.            ..+.|+.|+..|. ...|..|+.
T Consensus       410 C~NC~~~i~-l~~l~lHe~~C~-r~~V~Cp~~~Cg~v~~r-~el~------------~H~~C~~Cgk~f~-~s~LekH~~  473 (567)
T PLN03086        410 CRNCKHYIP-SRSIALHEAYCS-RHNVVCPHDGCGIVLRV-EEAK------------NHVHCEKCGQAFQ-QGEMEKHMK  473 (567)
T ss_pred             CCCCCCccc-hhHHHHHHhhCC-CcceeCCcccccceeec-cccc------------cCccCCCCCCccc-hHHHHHHHH
Confidence            444554433 344556664432 23345764  8877732 2222            3468999999996 678999999


Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccC----------ChHHHHHHHHhhcCCCChhhhhh
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFF----------RKSYLKVHLLTIHMQPADEAQNA  157 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~----------~~~~l~~H~~~~H~~~~~~~c~~  157 (230)
                      +++  .++.|+ |++.+ ....|..|+. .|...+++.|+.|++.|.          ..+.|..| .... +.+++.|. 
T Consensus       474 ~~H--kpv~Cp-Cg~~~-~R~~L~~H~~-thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~H-E~~C-G~rt~~C~-  545 (567)
T PLN03086        474 VFH--EPLQCP-CGVVL-EKEQMVQHQA-STCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEH-ESIC-GSRTAPCD-  545 (567)
T ss_pred             hcC--CCccCC-CCCCc-chhHHHhhhh-ccCCCCceeCCCCCCccccCccccchhhhhhhHHHH-HHhc-CCcceEcc-
Confidence            886  789999 99755 6689999988 899999999999999985          24589999 4444 77788874 


Q ss_pred             ccCCCCCCCCCcccccccccCCccccccccCCcccccccccc
Q psy14799        158 IHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTER  199 (230)
Q Consensus       158 ~~~C~~c~~~~~~~~~~~h~~~~C~~~f~~~~~l~~H~~~h~  199 (230)
                                            .||+.++. ..|..|+..-|
T Consensus       546 ----------------------~Cgk~Vrl-rdm~~H~~~~h  564 (567)
T PLN03086        546 ----------------------SCGRSVML-KEMDIHQIAVH  564 (567)
T ss_pred             ----------------------ccCCeeee-hhHHHHHHHhh
Confidence                                  78887776 56777776544

>PHA00733 hypothetical protein

Probab=99.17  E-value=5.2e-11  Score=82.94  Aligned_cols=97  Identities=18%  Similarity=0.255  Sum_probs=74.8

Q ss_pred             HHHHHHHHhhcCCCcccccccccccCChHHHHHh--HhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         21 LKLEAHITTVHGDKSFQCDECDMSFGTHQALGRH--KQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        21 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H--~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      .+|.++-..-...+++.|.+|...|.+...|..+  +..+....+.++|.|+.|++.|.+...|..|++.+  +.++.|.
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~  103 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP  103 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC
Confidence            3443333322335779999999999998887777  33222222347999999999999999999999976  3579999


Q ss_pred             cccccccCHHHHHHHHHhhcC
Q psy14799         99 LCFQSFYSKADLVRHMKGRHL  119 (230)
Q Consensus        99 ~C~~~f~~~~~l~~H~~~~H~  119 (230)
                      .|++.|.....|..|+...|.
T Consensus       104 ~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        104 VCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCHHHHHHHHHHhcC
Confidence            999999999999999986663

>KOG3993|consensus

Probab=99.01  E-value=1e-10  Score=93.71  Aligned_cols=145  Identities=19%  Similarity=0.262  Sum_probs=101.6

Q ss_pred             hhhhhhhhhhhhhhhccCHHHHHHHHHhhcCCCcccccccccccCChHHHHHhHhccCCCCC------------------
Q psy14799          2 LLSFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDIS------------------   63 (230)
Q Consensus         2 ~~~~~c~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~------------------   63 (230)
                      |=.|||..|.+   .|.+...|.+|.-.-.--.-|+|++|+++|....+|..|.+.|.....                  
T Consensus       265 iGdyiCqLCK~---kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae  341 (500)
T KOG3993|consen  265 IGDYICQLCKE---KYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAE  341 (500)
T ss_pred             HHHHHHHHHHH---hhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhh
Confidence            34689999655   999999999997543333459999999999999999999998854311                  


Q ss_pred             ------------CCcccccccccccCCHHHHHHhHHHhcCCC--------------------------------------
Q psy14799         64 ------------LRPFPCDLCEQRFLNKSHLAYHVKTHTGER--------------------------------------   93 (230)
Q Consensus        64 ------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--------------------------------------   93 (230)
                                  ...|.|.+|++.|.....|++|+.+|+...                                      
T Consensus       342 ~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~v  421 (500)
T KOG3993|consen  342 VQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEV  421 (500)
T ss_pred             hhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccce
Confidence                        123889999999999999999988775310                                      


Q ss_pred             --------ceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799         94 --------DVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus        94 --------~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                              -..+++++..+.+...-..+.+ .-..+..|.|.+|.-+|.+...|.+|+...|..+
T Consensus       422 l~~a~sael~~pp~~~~ppsss~~sgg~~r-lg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  422 LYVAGSAELELPPYDGSPPSSSGSSGGYGR-LGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             eeeeccccccCCCCCCCCcccCCCCCcccc-ccchhhccccccchHhhhcCcchHhHhhhcChHH
Confidence                    0123334433333222222222 1112234899999999999999999998888543

>PHA02768 hypothetical protein; Provisional

Probab=98.82  E-value=2.1e-09  Score=62.12  Aligned_cols=39  Identities=13%  Similarity=0.526  Sum_probs=18.5

Q ss_pred             ccccccccccCCHHHHHHhHHHhcCCCceecccccccccCH
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSK  107 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  107 (230)
                      |.|+.||+.|...+.|..|+++|+  ++++|..|++.|...
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~   44 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRT   44 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccc
Confidence            444444444444444444444444  344444444444433

>KOG3993|consensus

Probab=98.81  E-value=1.1e-09  Score=88.06  Aligned_cols=162  Identities=19%  Similarity=0.299  Sum_probs=99.5

Q ss_pred             ccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCcee---cccccccccCHHHHHH
Q psy14799         36 FQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVT---CGLCFQSFYSKADLVR  112 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~---C~~C~~~f~~~~~l~~  112 (230)
                      |.|..|...|.+...|.+|.-.....   ..|+|++|++.|.-..+|..|.++|.....-.   -+-=.+...+....+.
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~---vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVH---VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEE---eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            89999999999999999997533222   45999999999999999999999996422100   0000000011111111


Q ss_pred             HHH-hhcCCCCcccccccccccCChHHHHHHHHhhcCCCChhh-------------------------------------
Q psy14799        113 HMK-GRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEA-------------------------------------  154 (230)
Q Consensus       113 H~~-~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~-------------------------------------  154 (230)
                      -.+ ..-.....|.|..|++.|....-|+.|..++|.....-.                                     
T Consensus       345 a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~  424 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYV  424 (500)
T ss_pred             ccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeee
Confidence            000 000122358888888888888888888555553221110                                     


Q ss_pred             --hhhccCCCCCCCCCccc-----------ccccccCCccccccccCCccccccccccC
Q psy14799        155 --QNAIHRCYACRCAGHCL-----------QIGTHSGGICGSMWRVETWHPCHLLTERN  200 (230)
Q Consensus       155 --c~~~~~C~~c~~~~~~~-----------~~~~h~~~~C~~~f~~~~~l~~H~~~h~~  200 (230)
                        -.....++.++..+++.           -..+.+|++|.-.|.+..+|.+|+..-|-
T Consensus       425 a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  425 AGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             eccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcCh
Confidence              01113455555444332           13777788999999999999999887653

>PHA02768 hypothetical protein; Provisional

Probab=98.81  E-value=2e-09  Score=62.23  Aligned_cols=42  Identities=14%  Similarity=0.463  Sum_probs=28.9

Q ss_pred             eecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHH
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYL  139 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l  139 (230)
                      |.|+.||+.|...+.|..|++ .|.  ++++|..|++.|...++|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r-~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLR-KHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHH-hcC--CcccCCcccceeccccee
Confidence            667777777777777777777 565  467777777777666554

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.66  E-value=1.7e-08  Score=49.83  Aligned_cols=26  Identities=35%  Similarity=0.782  Sum_probs=22.3

Q ss_pred             HHHHHHHhhcCCCcccccccccccCC
Q psy14799         22 KLEAHITTVHGDKSFQCDECDMSFGT   47 (230)
Q Consensus        22 ~l~~H~~~h~~~~~~~C~~C~~~f~~   47 (230)
                      +|.+|+++|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47889999999999999999988863

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.62  E-value=3.1e-08  Score=48.91  Aligned_cols=24  Identities=46%  Similarity=0.820  Sum_probs=13.0

Q ss_pred             HHHhHHHhcCCCceeccccccccc
Q psy14799         82 LAYHVKTHTGERDVTCGLCFQSFY  105 (230)
Q Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~  105 (230)
                      |..|+++|++++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            455555555555555555555553

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.42  E-value=5.4e-07  Score=53.02  Aligned_cols=51  Identities=27%  Similarity=0.525  Sum_probs=35.6

Q ss_pred             ceecccccccccCHHHHHHHHHhhcCCC-CcccccccccccCChHHHHHHHHhhc
Q psy14799         94 DVTCGLCFQSFYSKADLVRHMKGRHLNI-RSFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      .|.|++|++ ..+..+|..|....|..+ +.+.||+|...+.  .+|.+|+...|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            367888888 455677888877677654 4577888877544  37778876666

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=98.39  E-value=1.8e-07  Score=51.46  Aligned_cols=33  Identities=18%  Similarity=0.314  Sum_probs=19.3

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ||.|+.||..|...++|..|++.|++++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            355666666666666666666666665555554

>PHA00732 hypothetical protein

Probab=98.27  E-value=6e-07  Score=56.88  Aligned_cols=21  Identities=33%  Similarity=0.599  Sum_probs=9.7

Q ss_pred             ccccccccccCChHHHHHhHh
Q psy14799         36 FQCDECDMSFGTHQALGRHKQ   56 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~   56 (230)
                      |.|+.|++.|.+...|..|++
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r   22 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHAR   22 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhh
Confidence            444444444444444444444

>PHA00732 hypothetical protein

Probab=98.25  E-value=7.5e-07  Score=56.43  Aligned_cols=37  Identities=24%  Similarity=0.507  Sum_probs=17.5

Q ss_pred             eecccccccccCHHHHHHHHHhhcCCCCcccccccccccC
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFF  134 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~  134 (230)
                      |.|..|++.|.+...|..|++..|.   ++.|+.|++.|.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~   38 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR   38 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC
Confidence            4455555555555555555442232   234555555554

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.17  E-value=3.2e-06  Score=49.72  Aligned_cols=37  Identities=24%  Similarity=0.469  Sum_probs=15.5

Q ss_pred             ccccccccccCChHHHHHhHhccCCCCCCCccccccccc
Q psy14799         36 FQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQ   74 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~   74 (230)
                      |.|+.|++ ..+...|..|....|.... +.+.||+|..
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~-~~v~CPiC~~   39 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSES-KNVVCPICSS   39 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCC-CCccCCCchh
Confidence            44444444 2333444444444433321 2344444444

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=98.17  E-value=8.2e-07  Score=48.88  Aligned_cols=27  Identities=15%  Similarity=0.160  Sum_probs=13.5

Q ss_pred             hhhhccCHHHHHHHHHhhcCCCccccc
Q psy14799         13 NYFFFLMGLKLEAHITTVHGDKSFQCD   39 (230)
Q Consensus        13 C~~~f~~~~~l~~H~~~h~~~~~~~C~   39 (230)
                      ||+.|....+|.+|++.|++++++.|+
T Consensus         7 CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          7 CGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             hhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            444555555555555555555554443

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.93  E-value=6.3e-06  Score=39.31  Aligned_cols=22  Identities=41%  Similarity=0.810  Sum_probs=14.0

Q ss_pred             ccccccccccCChHHHHHHHHh
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLT  145 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~  145 (230)
                      |.|+.|++.|.+.+.|.+|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.84  E-value=1.5e-05  Score=37.99  Aligned_cols=16  Identities=50%  Similarity=0.791  Sum_probs=5.7

Q ss_pred             ccccccccCHHHHHHH
Q psy14799         98 GLCFQSFYSKADLVRH  113 (230)
Q Consensus        98 ~~C~~~f~~~~~l~~H  113 (230)
                      +.|++.|.+...|..|
T Consensus         4 ~~C~~~f~~~~~l~~H   19 (23)
T PF00096_consen    4 PICGKSFSSKSNLKRH   19 (23)
T ss_dssp             TTTTEEESSHHHHHHH
T ss_pred             CCCCCccCCHHHHHHH
Confidence            3333333333333333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.82  E-value=1.8e-05  Score=37.91  Aligned_cols=24  Identities=46%  Similarity=0.834  Sum_probs=14.2

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      |.|++|++.|.+..+|..|+.+.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456777777777777777755443

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.77  E-value=2e-05  Score=52.51  Aligned_cols=72  Identities=24%  Similarity=0.419  Sum_probs=15.4

Q ss_pred             ccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhh
Q psy14799         69 CDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTI  146 (230)
Q Consensus        69 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~  146 (230)
                      |..|+..|.+...|..|+...++-..   + ....+.....+..+++ . .....+.|..|++.|.+...|..|+...
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~---~-~~~~l~~~~~~~~~~~-~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDI---P-DQKYLVDPNRLLNYLR-K-KVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             cccccccccccccccccccccccccc---c-cccccccccccccccc-c-ccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            55555555555556666543332110   0 1111122333333333 1 1112466777777777777777776554

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.66  E-value=4.4e-05  Score=50.83  Aligned_cols=70  Identities=26%  Similarity=0.460  Sum_probs=14.5

Q ss_pred             ccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHH
Q psy14799         38 CDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        38 C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      |..|+..|.+...|..|+...|+..    ..   ....+.....+..+++... ...+.|..|++.|.+...|..|++
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~----~~---~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFD----IP---DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             -------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccc----cc---ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHc
Confidence            5666666666666666665555431    00   0111112223333332211 124667777766766666777766

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.60  E-value=1.4e-05  Score=62.49  Aligned_cols=52  Identities=23%  Similarity=0.511  Sum_probs=40.4

Q ss_pred             CCceeccc--ccccccCHHHHHHHHHhhc------------------CCCCcccccccccccCChHHHHHHH
Q psy14799         92 ERDVTCGL--CFQSFYSKADLVRHMKGRH------------------LNIRSFTCHLCNKGFFRKSYLKVHL  143 (230)
Q Consensus        92 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H------------------~~~~~~~C~~C~~~f~~~~~l~~H~  143 (230)
                      ++||+|++  |.+.+.+...|+-|+..-|                  ...|||+|++|++.|.....|+-|+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            47788876  8888888888888876333                  1337899999999999999999983

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.56  E-value=7e-05  Score=35.77  Aligned_cols=14  Identities=43%  Similarity=0.743  Sum_probs=4.6

Q ss_pred             cccccCCHHHHHHh
Q psy14799         72 CEQRFLNKSHLAYH   85 (230)
Q Consensus        72 C~~~f~~~~~l~~H   85 (230)
                      |++.|.+...|..|
T Consensus         6 C~~~~~~~~~l~~H   19 (24)
T PF13894_consen    6 CGKSFRSKSELRQH   19 (24)
T ss_dssp             TS-EESSHHHHHHH
T ss_pred             CCCcCCcHHHHHHH
Confidence            33333333333333

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.54  E-value=5.3e-05  Score=37.56  Aligned_cols=23  Identities=43%  Similarity=0.936  Sum_probs=13.0

Q ss_pred             ccccccccccCChHHHHHhHhcc
Q psy14799         36 FQCDECDMSFGTHQALGRHKQCK   58 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~   58 (230)
                      |.|..|++.|.+...|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            55555555555555555555544

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.45  E-value=5.3e-05  Score=59.40  Aligned_cols=72  Identities=15%  Similarity=0.223  Sum_probs=47.8

Q ss_pred             CCCcccccc--cccccCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCcccccccccCCccccccccCCccccccc
Q psy14799        120 NIRSFTCHL--CNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLL  196 (230)
Q Consensus       120 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~~~~C~~~f~~~~~l~~H~~  196 (230)
                      +++||+|++  |.+.|++...|+-|++.-|...+..+-+...     ........-+...|++|+|+|.+...|+-|..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~-----~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPE-----KMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCcc-----ccccccccCCceeccccchhhccCccceeccc
Confidence            458999998  9999999999999987777332221111000     00001112244455799999999999999865

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.42  E-value=8.7e-05  Score=36.75  Aligned_cols=20  Identities=40%  Similarity=0.718  Sum_probs=12.0

Q ss_pred             cccccccccccCChHHHHHH
Q psy14799        123 SFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H  142 (230)
                      ||.|..|++.|.+...|..|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H   20 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREH   20 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHH
T ss_pred             CCCCCccCCccCChhHHHHH
Confidence            35566666666666666666

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.33  E-value=0.00053  Score=54.57  Aligned_cols=138  Identities=26%  Similarity=0.355  Sum_probs=91.9

Q ss_pred             hhhhhhhhhhhhhhhccCHHHHHHHHHhhcCCCcccccccc---------cccCChHHHHHhHhccCCCCCCCc-ccccc
Q psy14799          2 LLSFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECD---------MSFGTHQALGRHKQCKHMDISLRP-FPCDL   71 (230)
Q Consensus         2 ~~~~~c~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---------~~f~~~~~l~~H~~~~~~~~~~~~-~~C~~   71 (230)
                      |+.|.|.. ..|..+-..-..|..|.+.-++.  +.|.+|-         -..-+...|..|...-....+-+. -.|..
T Consensus       149 LL~F~CP~-skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~F  225 (493)
T COG5236         149 LLSFKCPK-SKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIF  225 (493)
T ss_pred             HHHhcCCc-hhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhh
Confidence            45666643 23555666677899999876653  4566553         223344667778653222212121 35999


Q ss_pred             cccccCCHHHHHHhHHHhcCCCceeccccc----ccccCHHHHHHHHHhhcCCCCcccccc--cc----cccCChHHHHH
Q psy14799         72 CEQRFLNKSHLAYHVKTHTGERDVTCGLCF----QSFYSKADLVRHMKGRHLNIRSFTCHL--CN----KGFFRKSYLKV  141 (230)
Q Consensus        72 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~----~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~----~~f~~~~~l~~  141 (230)
                      |...|-+-..|..|++..+ ++-+.|..-+    .-|.+...|.+|.+..|     |.|.+  |-    ..|.+..+|..
T Consensus       226 C~~~FYdDDEL~~HcR~~H-E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h-----y~ct~qtc~~~k~~vf~~~~el~~  299 (493)
T COG5236         226 CKIYFYDDDELRRHCRLRH-EACHICDMVGPIRYQYFKSYEDLEAHFRNAH-----YCCTFQTCRVGKCYVFPYHTELLE  299 (493)
T ss_pred             ccceecChHHHHHHHHhhh-hhhhhhhccCccchhhhhCHHHHHHHhhcCc-----eEEEEEEEecCcEEEeccHHHHHH
Confidence            9999999999999999665 3334443322    34888899999998555     66654  32    57999999999


Q ss_pred             HHHhhcC
Q psy14799        142 HLLTIHM  148 (230)
Q Consensus       142 H~~~~H~  148 (230)
                      |+...|.
T Consensus       300 h~~~~h~  306 (493)
T COG5236         300 HLTRFHK  306 (493)
T ss_pred             HHHHHhh
Confidence            9999984

>KOG2231|consensus

Probab=97.30  E-value=0.00034  Score=60.99  Aligned_cols=92  Identities=24%  Similarity=0.492  Sum_probs=49.1

Q ss_pred             CChHHHHHhHhccCCCCCCCcccccccc---------cccCCHHHHHHhHHHhcC-CC----ceecccccccccCHHHHH
Q psy14799         46 GTHQALGRHKQCKHMDISLRPFPCDLCE---------QRFLNKSHLAYHVKTHTG-ER----DVTCGLCFQSFYSKADLV  111 (230)
Q Consensus        46 ~~~~~l~~H~~~~~~~~~~~~~~C~~C~---------~~f~~~~~l~~H~~~h~~-~~----~~~C~~C~~~f~~~~~l~  111 (230)
                      .+...|+.|+...|..     +.|.+|-         ...-+...|..|+..--. ++    .-.|..|...|.....|.
T Consensus       125 ~s~~~Lk~H~~~~H~~-----~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~  199 (669)
T KOG2231|consen  125 KSVENLKNHMRDQHKL-----HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELY  199 (669)
T ss_pred             hHHHHHHHHHHHhhhh-----hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHH
Confidence            3556677776544433     4444432         122234456666552211 11    135666777777777777


Q ss_pred             HHHHhhcCCCCccccccc------ccccCChHHHHHHHHhhc
Q psy14799        112 RHMKGRHLNIRSFTCHLC------NKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       112 ~H~~~~H~~~~~~~C~~C------~~~f~~~~~l~~H~~~~H  147 (230)
                      +|++..|     |.|..|      +.-|.....|..|.+..|
T Consensus       200 rH~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  200 RHLRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             Hhhccce-----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            7776444     445555      244556667777766666

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.06  E-value=0.00019  Score=57.02  Aligned_cols=135  Identities=27%  Similarity=0.446  Sum_probs=89.8

Q ss_pred             cccccc--cccccCChHHHHHhHhccCCCCCCCccccccccc---cc------CCHHHHHHhHHHhcCCCc----eeccc
Q psy14799         35 SFQCDE--CDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQ---RF------LNKSHLAYHVKTHTGERD----VTCGL   99 (230)
Q Consensus        35 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~---~f------~~~~~l~~H~~~h~~~~~----~~C~~   99 (230)
                      .|.|+.  |..+......|+.|....|+.     +.|.+|-.   .|      -+...|..|...-..+..    -.|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~-----~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~F  225 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF-----VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIF  225 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc-----EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhh
Confidence            378865  677766678899999887765     67777742   22      234456666543322222    26999


Q ss_pred             ccccccCHHHHHHHHHhhcCCCCcccccccccc-------cCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCcccc
Q psy14799        100 CFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKG-------FFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQ  172 (230)
Q Consensus       100 C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~-------f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~  172 (230)
                      |...|-+...|..|++..|     -.|.+|++.       |.+..+|..|.+..|     |.|..    ..|.-      
T Consensus       226 C~~~FYdDDEL~~HcR~~H-----E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h-----y~ct~----qtc~~------  285 (493)
T COG5236         226 CKIYFYDDDELRRHCRLRH-----EACHICDMVGPIRYQYFKSYEDLEAHFRNAH-----YCCTF----QTCRV------  285 (493)
T ss_pred             ccceecChHHHHHHHHhhh-----hhhhhhhccCccchhhhhCHHHHHHHhhcCc-----eEEEE----EEEec------
Confidence            9999999999999998666     247777654       788888999977766     65542    11100      


Q ss_pred             cccccCCccccccccCCccccccccccCC
Q psy14799        173 IGTHSGGICGSMWRVETWHPCHLLTERNR  201 (230)
Q Consensus       173 ~~~h~~~~C~~~f~~~~~l~~H~~~h~~~  201 (230)
                            .. -..|.....|..|+..-|+.
T Consensus       286 ------~k-~~vf~~~~el~~h~~~~h~~  307 (493)
T COG5236         286 ------GK-CYVFPYHTELLEHLTRFHKV  307 (493)
T ss_pred             ------Cc-EEEeccHHHHHHHHHHHhhc
Confidence                  01 15788888999998766543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.75  E-value=0.0015  Score=36.92  Aligned_cols=29  Identities=17%  Similarity=0.445  Sum_probs=12.1

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGER   93 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   93 (230)
                      .|..|++|+..+.+..+|.+|+...++.+
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            34455555555555555555554444433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.68  E-value=0.0016  Score=31.14  Aligned_cols=23  Identities=39%  Similarity=0.582  Sum_probs=12.9

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      |+|+.|+.... .+.|.+|++..|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666665 666666655554

>smart00355 ZnF_C2H2 zinc finger

Probab=96.68  E-value=0.0019  Score=31.06  Aligned_cols=21  Identities=43%  Similarity=0.681  Sum_probs=13.6

Q ss_pred             ccccccccccCChHHHHHHHH
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      |.|+.|++.|.+.+.|..|++
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH
Confidence            456667777777767766643

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.66  E-value=0.0014  Score=37.00  Aligned_cols=31  Identities=23%  Similarity=0.381  Sum_probs=18.5

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhc
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      .+..+.|-.|++|+..+....+|++|+...|
T Consensus        18 ~~~S~~PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   18 KSQSEQPATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             CCTTS--EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             hhccCCCCCCCcchhhccchhhHHHHHHHHh
Confidence            3445567778888888888888888866666

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2231|consensus

Probab=96.57  E-value=0.0064  Score=53.36  Aligned_cols=115  Identities=25%  Similarity=0.457  Sum_probs=74.8

Q ss_pred             ccCHHHHHHHHHhhcCCCcccccc---------cccccCChHHHHHhHhccCC-CCCCCc-ccccccccccCCHHHHHHh
Q psy14799         17 FLMGLKLEAHITTVHGDKSFQCDE---------CDMSFGTHQALGRHKQCKHM-DISLRP-FPCDLCEQRFLNKSHLAYH   85 (230)
Q Consensus        17 f~~~~~l~~H~~~h~~~~~~~C~~---------C~~~f~~~~~l~~H~~~~~~-~~~~~~-~~C~~C~~~f~~~~~l~~H   85 (230)
                      |.+...|+.|+...|..  +.|.+         +.....+...|..|++.--. +...+. -.|..|...|.....|.+|
T Consensus       124 ~~s~~~Lk~H~~~~H~~--~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH  201 (669)
T KOG2231|consen  124 FKSVENLKNHMRDQHKL--HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRH  201 (669)
T ss_pred             hhHHHHHHHHHHHhhhh--hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHh
Confidence            34889999999654432  33433         23334456778888774333 211122 4699999999999999999


Q ss_pred             HHHhcCCCceecccc------cccccCHHHHHHHHHhhcCCCCccccc--cccc-ccCChHHHHHH
Q psy14799         86 VKTHTGERDVTCGLC------FQSFYSKADLVRHMKGRHLNIRSFTCH--LCNK-GFFRKSYLKVH  142 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~-~f~~~~~l~~H  142 (230)
                      ++.++    |.|..|      +..|.....|..|.+..|     |.|.  .|.- .|.....+..+
T Consensus       202 ~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H-----flCE~~~C~~~~f~~~~~~ei~  258 (669)
T KOG2231|consen  202 LRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH-----FLCEEEFCRTKKFYVAFELEIE  258 (669)
T ss_pred             hccce----eheeecCcccccchhcccchHHHHHhhhcC-----ccccccccccceeeehhHHHHH
Confidence            98766    566666      356788899999999666     7777  4542 33333344444

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.56  E-value=0.0017  Score=31.35  Aligned_cols=21  Identities=43%  Similarity=0.887  Sum_probs=13.0

Q ss_pred             ccccccccccCChHHHHHHHH
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      |.|.+|++.|.+...|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            456666666666666666643

>KOG2482|consensus

Probab=96.51  E-value=0.01  Score=47.40  Aligned_cols=24  Identities=33%  Similarity=0.494  Sum_probs=14.9

Q ss_pred             eecccccccccCHHHHHHHHHhhc
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRH  118 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H  118 (230)
                      ..|-.|.....+...|..||...|
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vH  303 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVH  303 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHH
Confidence            356666666666666666666555

>KOG4173|consensus

Probab=96.42  E-value=0.0012  Score=48.67  Aligned_cols=84  Identities=26%  Similarity=0.495  Sum_probs=54.9

Q ss_pred             Ccccccc--cccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhc---------CCCCcccccc--ccc
Q psy14799         65 RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRH---------LNIRSFTCHL--CNK  131 (230)
Q Consensus        65 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H---------~~~~~~~C~~--C~~  131 (230)
                      ..+.|++  |...|.+......|..+-++   -.|+.|.+.|.+..-|..|+...|         .|...|.|-+  |+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            3466766  66777777666666554443   257777777777777777776444         2455677744  777


Q ss_pred             ccCChHHHHHHHHhhcCCCC
Q psy14799        132 GFFRKSYLKVHLLTIHMQPA  151 (230)
Q Consensus       132 ~f~~~~~l~~H~~~~H~~~~  151 (230)
                      .|.+....+.|+...|.-..
T Consensus       155 KFkT~r~RkdH~I~~Hk~Pa  174 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHKYPA  174 (253)
T ss_pred             hhhhhhhhhhHHHHhccCCc
Confidence            77777777777777775443

>KOG4173|consensus

Probab=96.32  E-value=0.0027  Score=46.92  Aligned_cols=84  Identities=24%  Similarity=0.470  Sum_probs=66.8

Q ss_pred             cccccc--cccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHh----------cCCCceeccc--c
Q psy14799         35 SFQCDE--CDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTH----------TGERDVTCGL--C  100 (230)
Q Consensus        35 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h----------~~~~~~~C~~--C  100 (230)
                      .|.|++  |...|.+......|...-|+.      .|..|.+.|.+...|..|+..-          .|...|.|-+  |
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~------sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN------SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc------hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence            377876  778888888888887665554      8999999999999999998633          2456689965  9


Q ss_pred             cccccCHHHHHHHHHhhcCCCCcc
Q psy14799        101 FQSFYSKADLVRHMKGRHLNIRSF  124 (230)
Q Consensus       101 ~~~f~~~~~l~~H~~~~H~~~~~~  124 (230)
                      +..|.+..+...|+...|.-...|
T Consensus       153 t~KFkT~r~RkdH~I~~Hk~Pa~f  176 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRMHKYPADF  176 (253)
T ss_pred             hhhhhhhhhhhhHHHHhccCCcce
Confidence            999999999999998788655444

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.24  E-value=0.0038  Score=30.03  Aligned_cols=21  Identities=33%  Similarity=0.768  Sum_probs=16.7

Q ss_pred             eecccccccccCHHHHHHHHH
Q psy14799         95 VTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      |.|.+|++.|.+...|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            568888888888888888876

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.21  E-value=0.0041  Score=29.65  Aligned_cols=7  Identities=43%  Similarity=0.909  Sum_probs=2.6

Q ss_pred             HHHHHHH
Q psy14799        108 ADLVRHM  114 (230)
Q Consensus       108 ~~l~~H~  114 (230)
                      ..|.+|+
T Consensus        13 ~~l~~H~   19 (24)
T PF13909_consen   13 SNLKRHL   19 (24)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            3333333

>KOG1146|consensus

Probab=96.21  E-value=0.0041  Score=57.89  Aligned_cols=52  Identities=8%  Similarity=0.036  Sum_probs=34.7

Q ss_pred             ccccccccccCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCcccccccccCCccccccccCCccccccccc
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTE  198 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~~~~C~~~f~~~~~l~~H~~~h  198 (230)
                      +.|.+|++.-.-..+|+.|+...+....|-.+-                       .++-.+.....+..+-+.+
T Consensus       590 ~~C~vc~yetniarnlrihmtss~~s~~p~~~L-----------------------q~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  590 WRCEVCSYETNIARNLRIHMTASPSSSPPSLVL-----------------------QQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             cchhhhcchhhhhhccccccccCCCCCChHHHh-----------------------hhcchhhccccccCcCCCC
Confidence            778888887777778888866665555544443                       5566666666666666655

>KOG1146|consensus

Probab=96.01  E-value=0.0039  Score=58.04  Aligned_cols=127  Identities=17%  Similarity=0.188  Sum_probs=70.6

Q ss_pred             cccccCCHHHHHHhHH-HhcCCCceecccccccccCHHHHHHHHHhhc------------------------CCCCcccc
Q psy14799         72 CEQRFLNKSHLAYHVK-THTGERDVTCGLCFQSFYSKADLVRHMKGRH------------------------LNIRSFTC  126 (230)
Q Consensus        72 C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H------------------------~~~~~~~C  126 (230)
                      ++..+.+...+..|+. .+.-.+.++|+.|+..|.....|..|++..|                        .+.++|.|
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C  521 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPC  521 (1406)
T ss_pred             hhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccc
Confidence            3333444444444432 2333455666666666666666666666433                        23467999


Q ss_pred             cccccccCChHHHHHHHHhh-cCCC----------ChhhhhhccCCCCCCCCC------cc---cccccccCCccccccc
Q psy14799        127 HLCNKGFFRKSYLKVHLLTI-HMQP----------ADEAQNAIHRCYACRCAG------HC---LQIGTHSGGICGSMWR  186 (230)
Q Consensus       127 ~~C~~~f~~~~~l~~H~~~~-H~~~----------~~~~c~~~~~C~~c~~~~------~~---~~~~~h~~~~C~~~f~  186 (230)
                      ..|..++.+..+|.+|++.. |..+          ....-.. ..+..+....      .+   .-.-.-.|++|+..-.
T Consensus       522 ~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~-~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetn  600 (1406)
T KOG1146|consen  522 RACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPA-SVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETN  600 (1406)
T ss_pred             eeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhh-hhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhh
Confidence            99999999999999998754 3222          0000000 0011111111      11   1123445579999999


Q ss_pred             cCCcccccccccc
Q psy14799        187 VETWHPCHLLTER  199 (230)
Q Consensus       187 ~~~~l~~H~~~h~  199 (230)
                      -..+|+.||..-.
T Consensus       601 iarnlrihmtss~  613 (1406)
T KOG1146|consen  601 IARNLRIHMTASP  613 (1406)
T ss_pred             hhhccccccccCC
Confidence            9999999987543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.84  E-value=0.0052  Score=30.25  Aligned_cols=21  Identities=38%  Similarity=0.868  Sum_probs=14.8

Q ss_pred             ccccccccccCChHHHHHhHh
Q psy14799         36 FQCDECDMSFGTHQALGRHKQ   56 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~   56 (230)
                      |.|..|++.|.+...|..|+.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            567777777777777777765

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.84  E-value=0.0025  Score=31.45  Aligned_cols=20  Identities=40%  Similarity=0.793  Sum_probs=12.7

Q ss_pred             ccccccccccCChHHHHHHH
Q psy14799        124 FTCHLCNKGFFRKSYLKVHL  143 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~  143 (230)
                      |.|..|++.|.+...|..|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCT
T ss_pred             CCcccCCCCcCCHHHHHHHH
Confidence            45666666666666666663

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=95.71  E-value=0.0067  Score=44.00  Aligned_cols=38  Identities=18%  Similarity=0.430  Sum_probs=24.4

Q ss_pred             ceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCCh
Q psy14799         94 DVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRK  136 (230)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~  136 (230)
                      +|.|. |+.   ....+.+|.+ .|.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~r-i~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNR-VVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHH-HhcCCccEECCCCCceeEEe
Confidence            46776 665   3445666766 67777777777777666543

>KOG2482|consensus

Probab=95.69  E-value=0.037  Score=44.34  Aligned_cols=73  Identities=16%  Similarity=0.183  Sum_probs=43.5

Q ss_pred             ccccccccccCChHHHHHHHHhhcCCC-----ChhhhhhccCCCCCCCCCcccccccccCCccccccccCCccccccccc
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIHMQP-----ADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTE  198 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H~~~-----~~~~c~~~~~C~~c~~~~~~~~~~~h~~~~C~~~f~~~~~l~~H~~~h  198 (230)
                      ..|-.|.....+...|..|+..+|.-.     +.|.-....+-..  -.+....+..-.|-.|.-.|-....|..||.-+
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~Yqrvrv--iNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRV--INYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhH--HHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            589999999999999999999999311     1110000000000  000000112223358999999999999999754

>PRK04860 hypothetical protein; Provisional

Probab=95.66  E-value=0.0051  Score=44.62  Aligned_cols=36  Identities=22%  Similarity=0.619  Sum_probs=18.4

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCCCceeccccccccc
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFY  105 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  105 (230)
                      +|.|. |+.   ....+..|.++|.++++|.|..|+..|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            35554 554   3334455555555555555555555443

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.63  E-value=0.033  Score=26.83  Aligned_cols=18  Identities=28%  Similarity=0.774  Sum_probs=11.2

Q ss_pred             ccccccccccCChHHHHHH
Q psy14799        124 FTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H  142 (230)
                      ..|+.||+.| ..+.|.+|
T Consensus         3 ~~C~~CgR~F-~~~~l~~H   20 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKH   20 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHH
Confidence            3566677776 44566666

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.45  E-value=0.039  Score=26.58  Aligned_cols=19  Identities=42%  Similarity=0.992  Sum_probs=9.2

Q ss_pred             cccccccccCCHHHHHHhHH
Q psy14799         68 PCDLCEQRFLNKSHLAYHVK   87 (230)
Q Consensus        68 ~C~~C~~~f~~~~~l~~H~~   87 (230)
                      .|+.||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 3344555543

>KOG2785|consensus

Probab=94.42  E-value=0.17  Score=41.37  Aligned_cols=54  Identities=22%  Similarity=0.385  Sum_probs=42.7

Q ss_pred             ceecccccccccCHHHHHHHHHhhcCCC----------------------Ccccccccc---cccCChHHHHHHHHhhc
Q psy14799         94 DVTCGLCFQSFYSKADLVRHMKGRHLNI----------------------RSFTCHLCN---KGFFRKSYLKVHLLTIH  147 (230)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~----------------------~~~~C~~C~---~~f~~~~~l~~H~~~~H  147 (230)
                      |-.|-.|++.+.+...-..||...|.--                      ..+.|-.|+   +.|.+....+.||...-
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~K~  244 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRDKG  244 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhhcc
Confidence            4679999999999999999998666422                      227788888   89999999999987653

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.26  E-value=0.037  Score=28.89  Aligned_cols=23  Identities=35%  Similarity=0.667  Sum_probs=16.7

Q ss_pred             cccccccccccCChHHHHHHHHh
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLT  145 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~  145 (230)
                      +|.|.+|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46788888888877777777543

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2785|consensus

Probab=94.22  E-value=0.19  Score=41.10  Aligned_cols=51  Identities=22%  Similarity=0.405  Sum_probs=44.4

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCC-----------------------Cceeccccc---ccccCHHHHHHHHHh
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGE-----------------------RDVTCGLCF---QSFYSKADLVRHMKG  116 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~  116 (230)
                      |-.|..|+..+.+...-..||..++|-                       ..+.|-.|+   +.|.+..+.+.||..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            367999999999999999999988762                       347899999   999999999999983

>KOG2893|consensus

Probab=93.68  E-value=0.018  Score=43.69  Aligned_cols=49  Identities=33%  Similarity=0.762  Sum_probs=38.3

Q ss_pred             ecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCC
Q psy14799         96 TCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus        96 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      .|=+|++.|.+..-|.+|++..|     |+|.+|.+...+--.|..|-..+|.+
T Consensus        12 wcwycnrefddekiliqhqkakh-----fkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc-----ceeeeehhhhccCCCceeehhhhhhh
Confidence            47788888888888888877444     88888888777777888887777743

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.33  E-value=0.079  Score=27.57  Aligned_cols=22  Identities=27%  Similarity=0.590  Sum_probs=17.2

Q ss_pred             ceecccccccccCHHHHHHHHH
Q psy14799         94 DVTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      +|.|.+|+..|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4778888888888888877775

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=92.76  E-value=0.26  Score=33.34  Aligned_cols=24  Identities=21%  Similarity=0.346  Sum_probs=22.2

Q ss_pred             ccc----cccccccCChHHHHHHHHhhc
Q psy14799        124 FTC----HLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       124 ~~C----~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      |.|    ..|+..+.+...+.+|+...|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            889    999999999999999988877

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.68  E-value=0.033  Score=46.90  Aligned_cols=62  Identities=31%  Similarity=0.559  Sum_probs=35.8

Q ss_pred             cccccccccccCCHHHHHHhHH--HhcCC--Cceecc--cccccccCHHHHHHHHHhhcCCCCcccccc
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVK--THTGE--RDVTCG--LCFQSFYSKADLVRHMKGRHLNIRSFTCHL  128 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  128 (230)
                      ++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+.+|.. .|.+..++.+..
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  356 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHIL-LHTSISPAKEKL  356 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcc-cccCCCcccccc
Confidence            4555566666666666666665  55555  566666  46666666666666655 555555444433

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.97  E-value=0.088  Score=30.33  Aligned_cols=29  Identities=21%  Similarity=0.266  Sum_probs=23.2

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhhc
Q psy14799        119 LNIRSFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       119 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      .++.-+.||-|+..|....++.+|....|
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            45566788888888888888888877777

>KOG2893|consensus

Probab=91.50  E-value=0.036  Score=42.17  Aligned_cols=43  Identities=21%  Similarity=0.170  Sum_probs=22.1

Q ss_pred             hhhhhhhhccCHHHHHHHHHhhcCCCcccccccccccCChHHHHHhH
Q psy14799          9 YWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHK   55 (230)
Q Consensus         9 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   55 (230)
                      ||--|++.|.+..-|..|++.    +-|+|.+|.+...+--.|..|.
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeeh
Confidence            334455566665555555543    2355666655544444455443

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=91.02  E-value=0.11  Score=26.85  Aligned_cols=8  Identities=25%  Similarity=1.169  Sum_probs=4.2

Q ss_pred             cccccccc
Q psy14799        123 SFTCHLCN  130 (230)
Q Consensus       123 ~~~C~~C~  130 (230)
                      ++.|++|+
T Consensus        17 ~~~CP~Cg   24 (33)
T cd00350          17 PWVCPVCG   24 (33)
T ss_pred             CCcCcCCC
Confidence            45555555

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.91  E-value=0.019  Score=48.30  Aligned_cols=49  Identities=27%  Similarity=0.392  Sum_probs=27.1

Q ss_pred             hhhhccCHHHHHHHHH--hhcCC--Cccccc--ccccccCChHHHHHhHhccCCC
Q psy14799         13 NYFFFLMGLKLEAHIT--TVHGD--KSFQCD--ECDMSFGTHQALGRHKQCKHMD   61 (230)
Q Consensus        13 C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~   61 (230)
                      |...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|...+...
T Consensus       295 ~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  349 (467)
T COG5048         295 CNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSI  349 (467)
T ss_pred             ccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCC
Confidence            4445555555555555  45555  555555  4555555555555555554444

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.70  E-value=0.14  Score=29.58  Aligned_cols=28  Identities=32%  Similarity=0.622  Sum_probs=20.0

Q ss_pred             CCCceecccccccccCHHHHHHHHHhhc
Q psy14799         91 GERDVTCGLCFQSFYSKADLVRHMKGRH  118 (230)
Q Consensus        91 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (230)
                      |+.-+.|+-|+..|....++.+|....|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            4555677777777777777777777555

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=85.44  E-value=2  Score=28.98  Aligned_cols=24  Identities=25%  Similarity=0.376  Sum_probs=21.7

Q ss_pred             eec----ccccccccCHHHHHHHHHhhc
Q psy14799         95 VTC----GLCFQSFYSKADLVRHMKGRH  118 (230)
Q Consensus        95 ~~C----~~C~~~f~~~~~l~~H~~~~H  118 (230)
                      |.|    ..|+....+...+..|++..|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            899    999999999999999999655

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=85.33  E-value=0.72  Score=24.32  Aligned_cols=33  Identities=21%  Similarity=0.438  Sum_probs=16.4

Q ss_pred             eecccccccccCHHHHHHHHHhhcCCCCccccccccccc
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGF  133 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f  133 (230)
                      ..|+.|+..|.-..+.      .-......+|+.|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~------ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEK------IPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHH------CCCCCcEEECCCCCCEe
Confidence            3566666666554442      11222345666666555

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=85.09  E-value=0.68  Score=24.57  Aligned_cols=32  Identities=28%  Similarity=0.466  Sum_probs=14.9

Q ss_pred             ecccccccccCHHHHHHHHHhhcCCCCccccccccccc
Q psy14799         96 TCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGF  133 (230)
Q Consensus        96 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f  133 (230)
                      .|+.|+..|.-..+-      .-.+....+|+.|+..|
T Consensus         4 ~CP~C~~~f~v~~~~------l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDDK------LPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHHH------cccCCcEEECCCCCcEe
Confidence            455565555544331      11222345566665554

>TIGR00622 ssl1 transcription factor ssl1

Probab=84.86  E-value=1.3  Score=29.98  Aligned_cols=24  Identities=25%  Similarity=0.620  Sum_probs=14.8

Q ss_pred             cccccccccccCChHHHHHHHHhhc
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      .|.|+.|...|=..-+.-.| ...|
T Consensus        81 ~y~C~~C~~~FC~dCD~fiH-e~Lh  104 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVH-ESLH  104 (112)
T ss_pred             ceeCCCCCCccccccchhhh-hhcc
Confidence            46677777666666666666 4444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=84.73  E-value=0.59  Score=27.45  Aligned_cols=10  Identities=20%  Similarity=0.328  Sum_probs=6.0

Q ss_pred             Cceecccccc
Q psy14799         93 RDVTCGLCFQ  102 (230)
Q Consensus        93 ~~~~C~~C~~  102 (230)
                      .+|.|+.||+
T Consensus        49 ~~Y~Cp~CGF   58 (61)
T COG2888          49 NPYRCPKCGF   58 (61)
T ss_pred             CceECCCcCc
Confidence            4566666664

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=84.70  E-value=0.15  Score=39.10  Aligned_cols=13  Identities=23%  Similarity=0.736  Sum_probs=10.3

Q ss_pred             ccccccccccCCh
Q psy14799        124 FTCHLCNKGFFRK  136 (230)
Q Consensus       124 ~~C~~C~~~f~~~  136 (230)
                      ..||.||.+|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            5799999887754

>KOG2186|consensus

Probab=84.64  E-value=0.67  Score=35.84  Aligned_cols=45  Identities=22%  Similarity=0.434  Sum_probs=21.0

Q ss_pred             ccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhH
Q psy14799         36 FQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHV   86 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   86 (230)
                      |.|..||....- ..+.+|+..-++.    -|.|..|+..|.. .+...|.
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn~----~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRNA----YFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccCC----eeEEeeccccccc-chhhhhh
Confidence            445555554433 2344455444332    3555555555554 3444443

>PF12907 zf-met2: Zinc-binding

Probab=84.29  E-value=0.98  Score=24.43  Aligned_cols=32  Identities=25%  Similarity=0.454  Sum_probs=21.8

Q ss_pred             ccccccccccC---ChHHHHHHHHhhcCCCChhhh
Q psy14799        124 FTCHLCNKGFF---RKSYLKVHLLTIHMQPADEAQ  155 (230)
Q Consensus       124 ~~C~~C~~~f~---~~~~l~~H~~~~H~~~~~~~c  155 (230)
                      +.|.+|..+|.   +...|..|....|....+..|
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~~~C   36 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKHPKNTFEEC   36 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccCCCCCHHHc
Confidence            56888885544   456788887788877655554

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.15  E-value=0.99  Score=24.89  Aligned_cols=24  Identities=38%  Similarity=0.495  Sum_probs=10.5

Q ss_pred             ccccccccccCCh----HHHHHHHHhhc
Q psy14799        124 FTCHLCNKGFFRK----SYLKVHLLTIH  147 (230)
Q Consensus       124 ~~C~~C~~~f~~~----~~l~~H~~~~H  147 (230)
                      ..|..|++.+...    +.|.+|++..|
T Consensus        17 a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   17 AKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             EEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            4555555555442    45556644433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=82.58  E-value=0.3  Score=37.39  Aligned_cols=22  Identities=23%  Similarity=0.454  Sum_probs=13.2

Q ss_pred             CcccccccccccCChHHHHHhH
Q psy14799         34 KSFQCDECDMSFGTHQALGRHK   55 (230)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~   55 (230)
                      +...|+.|+..|.++.-.....
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~   25 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKI   25 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCc
Confidence            4466777777777664444443

>KOG2186|consensus

Probab=82.36  E-value=0.95  Score=35.03  Aligned_cols=46  Identities=20%  Similarity=0.455  Sum_probs=26.3

Q ss_pred             ccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHH
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      |.|..||...... .+.+|+..-++ .-|.|-.|+..|.. ..+..|..
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            5666666655543 35556655555 34666666666665 45555554

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=81.91  E-value=0.98  Score=23.94  Aligned_cols=13  Identities=31%  Similarity=0.587  Sum_probs=6.4

Q ss_pred             eecccccccccCH
Q psy14799         95 VTCGLCFQSFYSK  107 (230)
Q Consensus        95 ~~C~~C~~~f~~~  107 (230)
                      +.|+.|+..|.-.
T Consensus         3 ~~CP~C~~~~~v~   15 (38)
T TIGR02098         3 IQCPNCKTSFRVV   15 (38)
T ss_pred             EECCCCCCEEEeC
Confidence            3455555555443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=80.67  E-value=1.1  Score=30.28  Aligned_cols=29  Identities=21%  Similarity=0.292  Sum_probs=20.7

Q ss_pred             CCCCCCCCCcccccccccCCccccccccC
Q psy14799        160 RCYACRCAGHCLQIGTHSGGICGSMWRVE  188 (230)
Q Consensus       160 ~C~~c~~~~~~~~~~~h~~~~C~~~f~~~  188 (230)
                      .|+.||+.|..+....-.|+.||..|.-.
T Consensus        11 ~Cp~CG~kFYDLnk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   11 TCPSCGAKFYDLNKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cCCCCcchhccCCCCCccCCCCCCccCcc
Confidence            36666666666666666677899888876

The function of members of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	230
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-12
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-09
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		8e-08
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		8e-09
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-08
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-07
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		4e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		7e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		8e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		5e-06
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		8e-07
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		8e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-05
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		9e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		9e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-04
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		9e-05
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-04
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-04
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		6e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 17  FLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF 76
           F     L  H  T  G+K ++C EC  SF   + L RH++        +P+ C  C + F
Sbjct: 31  FSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR---THTGEKPYKCPECGKSF 87
Query: 77  LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRK 136
             +++L  H +THTGE+   C  C +SF   A L  H +  H   + + C  C K F R+
Sbjct: 88  SQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFSRE 146
Query: 137 SYLKVHLLT 145
             L  H  T
Sbjct: 147 DNLHTHQRT 155

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 11  NKNYFFFLMGLKLEAHITTVHGDKSFQCD--ECDMSFGTHQALGRHKQCKHMDISLRPFP 68
           NK YF       L+ H     G+K +QCD  +C+  F     L RH++       ++PF 
Sbjct: 15  NKRYFKLSH---LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR---RHTGVKPFQ 68
Query: 69  CDLCEQRFLNKSHLAYHVKTHTGERDVTC--GLCFQSFYSKADLVRH 113
           C  C+++F    HL  H +THTGE+  +C    C + F    +LVRH
Sbjct: 69  CKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLN 120
           RPF C    C +R+   SHL  H + HTGE+   C    C + F     L RH + RH  
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTG 63
Query: 121 IRSFTCHLCNKGFFRKSYLKVHLLT 145
           ++ F C  C + F R  +LK H  T
Sbjct: 64  VKPFQCKTCQRKFSRSDHLKTHTRT 88

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSF 124
           +P+ C  C + F   S+L  H +THTGE+   C  C +SF   +DL +H +  H   + +
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRT-HTGEKPY 61
Query: 125 TCHLCNKGFFRKSYLKVHLLT 145
            C  C K F R  +L  H  T
Sbjct: 62  KCPECGKSFSRSDHLSRHQRT 82

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 47/98 (47%)
Query: 17  FLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF 76
           FL    L+ H     G+K F+C +C   +   + L  H+    M+ S + F C +C++ F
Sbjct: 17  FLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETF 76
Query: 77  LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHM 114
             +  L  H+ +HTGE    C  C Q F  K DL  HM
Sbjct: 77  RRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 69  CDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRS---FT 125
           C  C ++FL+K +L  H + HTGE+   C  C + ++ K +L+ H + R+   RS   FT
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH-EARNCMNRSEQVFT 68
Query: 126 CHLCNKGFFRKSYLKVHLLT 145
           C +C + F R+  L++H+++
Sbjct: 69  CSVCQETFRRRMELRLHMVS 88

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR 122
           RP+ C +  C++RF + S+L  H++ HTG++   C +C ++F     L  H++  H   +
Sbjct: 3   RPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEK 61
Query: 123 SFTCHLCNKGFFRKSYLKVHLLTIHMQPAD 152
            F C +C + F R    K H   IH++  D
Sbjct: 62  PFACDICGRKFARSDERKRH-TKIHLRQKD 90

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR 122
           RP+ C +  C++RF   + L  H++ HTG++   C +C ++F     L  H++  H   +
Sbjct: 3   RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEK 61
Query: 123 SFTCHLCNKGFFRKSYLKVHLLTIHMQPAD 152
            F C +C + F R    K H   IH++  D
Sbjct: 62  PFACDICGRKFARSDERKRH-TKIHLRQKD 90

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR 122
           RP+ C +  C++RF   + L  H++ HTG++   C +C ++F     L  H++  H   +
Sbjct: 3   RPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEK 61
Query: 123 SFTCHLCNKGFFRKSYLKVHLLTIHMQPAD 152
            F C +C + F R    K H   IH++  D
Sbjct: 62  PFACDICGRKFARSDERKRH-TKIHLRQKD 90

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR 122
           RP+ C +  C++RF     L  H++ HTG++   C +C ++F     L  H++  H   +
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEK 61
Query: 123 SFTCHLCNKGFFRKSYLKVHLLTIHMQPAD 152
            F C +C + F R    K H   IH++  D
Sbjct: 62  PFACDICGRKFARSDERKRH-TKIHLRQKD 90

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 40  ECDMSFGTHQALGRHKQCKHMDISLRPFPC--DLCEQRFLNKSHLAYHVKTHTGERDVTC 97
           +C  ++  +  L  H  CKH     +PFPC  + CE+ F +  HL  H  THTGE++ TC
Sbjct: 19  DCGAAYNKNWKLQAH-LCKH--TGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTC 75
Query: 98  GL--CFQSFYSKADLVRHMKGRH-LNIRSFTCHL--CNKGFFRKSYLKVHLLT 145
               C   F +KA++ +H    H + I  + CH   C K F + + LKVH  +
Sbjct: 76  DSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS 128

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR 122
           RP+ C +  C++RF     L  H++ HTG++   C +C ++F     L  H++  H   +
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGEK 61
Query: 123 SFTCHLCNKGFFRKSYLKVHLLTIHMQPAD 152
            F C +C + F R    K H   IH++  D
Sbjct: 62  PFACDICGRKFARSDERKRH-TKIHLRQKD 90

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSF 124
           + F C  C + F    +L  H +THT ER  TC +C ++F  + D +R  +  H   + F
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAF-RRQDHLRDHRYIHSKEKPF 74
Query: 125 TCHLCNKGFFRKSYLKVHLLTIHMQPAD 152
            C  C KGF +   L VH  T+HMQ + 
Sbjct: 75  KCQECGKGFCQSRTLAVH-KTLHMQTSS 101

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 39  DECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG 98
           + CD  F     L RH +   +    +PF C +C + F    HL  H++THTGE+   C 
Sbjct: 9   ESCDRRFSRSDELTRHIR---IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 65
Query: 99  LCFQSFYSKADLVRHMK 115
           +C + F    +  RH K
Sbjct: 66  ICGRKFARSDERKRHTK 82

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 39  DECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG 98
           + CD  F     L RH +   +    +PF C +C + F    HL  H++THTGE+   C 
Sbjct: 10  ESCDRRFSRSDELTRHIR---IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 99  LCFQSFYSKADLVRHMK 115
           +C + F    +  RH K
Sbjct: 67  ICGRKFARSDERKRHTK 83

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 35  SFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERD 94
           SF C  C  SF     L  H    H D   RP+PC  C +RF  KS +  H   HTGE+ 
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLI-HSDT--RPYPCQYCGKRFHQKSDMKKHTFIHTGEKP 57
Query: 95  VTCGLCFQSFYSKADLVRHMK 115
             C +C ++F   ++L+ H +
Sbjct: 58  HKCQVCGKAFSQSSNLITHSR 78

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTG 91
           GDK + C +C  SF       RH     M + LRP+ C +C ++F  K HL  H+K HTG
Sbjct: 7   GDKLYPC-QCGKSFTHKSQRDRHMS---MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
Query: 92  ERDVTCGLCFQSFYSKADLVRHM 114
            +   C +C + F  +    RH+
Sbjct: 63  IKPYECNICAKRFMWRDSFHRHV 85

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 67  FPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC 126
           +PC  C + F +KS    H+  H G R   CG+C + F  K  LV HMK  H  I+ + C
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYEC 68
Query: 127 HLCNKGFFRKSYLKVHLL--TIHMQPADEAQNAI 158
           ++C K F  +     H+   T   + A   QN  
Sbjct: 69  NICAKRFMWRDSFHRHVTSCTKSYEAAKAEQNTT 102

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 69  CDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNI-RSFTCH 127
           C++C + F +  HL  H  +H+GE+  +C +C   F  K  +  H++    ++ + + C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 128 LCNKGFFRKSYLKVHLLTIHMQPAD 152
            C KGF R  +L  H+  +H  P+ 
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHSGPSS 94

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 69  CDL--CEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSF 124
           CD   C + +   SHL  H++THTGE+   C    C   F    +L RH + +H   + F
Sbjct: 18  CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR-KHTGAKPF 76
Query: 125 TCHLCNKGFFRKSYLKVHL 143
            C +CN+ F R  +L +H+
Sbjct: 77  QCGVCNRSFSRSDHLALHM 95

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 64  LRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHL 119
           ++PF C +C + F    HL  H++THTGE+   C +C + F    +  RH   +H+
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI 56

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 72  CEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCHLC 129
           C + +   SHL  H++THTGE+   C    C   F    +L RH + +H   R F C  C
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQKC 72
Query: 130 NKGFFRKSYLKVHL 143
           ++ F R  +L +H+
Sbjct: 73  DRAFSRSDHLALHM 86

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 72  CEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCHLC 129
           C + +   SHL  H++THTGE+   C    C   F    +L RH + +H   R F C  C
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQKC 71
Query: 130 NKGFFRKSYLKVHL 143
           ++ F R  +L +H+
Sbjct: 72  DRAFSRSDHLALHM 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 39  DECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG 98
           + CD  F     L  H +   +    +PF C +C + F  ++ L  H++THTGE+   C 
Sbjct: 10  ESCDRRFSQKTNLDTHIR---IHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACD 66
Query: 99  LCFQSFYSKADLVRHMK 115
           +C + F +     RH K
Sbjct: 67  ICGRKFATLHTRTRHTK 83

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 67  FPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRH 118
           F C++C + F  + HL  H ++HT E+   CGLC ++F  +  L+RH +  H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 34 KSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTG 91
          + ++CDEC  SF     L +H++        +P+ CD C + F+ +SHL  H + HTG
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRR---THTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 17 FLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF 76
          F    KL+ H+    G K ++C  CD +     +L +H +  H D   RPF C +C    
Sbjct: 18 FSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI-HSD--ERPFKCQICPYAS 74
Query: 77 LNKSHLAYHVKTHTGERDVTCG 98
           N S L  H+++HTG+   + G
Sbjct: 75 RNSSQLTVHLRSHTGDSGPSSG 96

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 63  SLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR 122
           S  P  C++C + F  K  L  H++ HTG +   C  C  +    + L +H++  H + R
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDER 63
Query: 123 SFTCHLCNKGFFRKSYLKVHLLT 145
            F C +C       S L VHL +
Sbjct: 64  PFKCQICPYASRNSSQLTVHLRS 86

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK 115
           +P+ CD C+  F  K +LA H   HTGE+   C +C   F   A+L  H +
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTC--GLCFQSFYSKADLVRHMKGRHLN 120
           +P  C    C + +    +L  H+++HTGE+   C    C ++F + +D  +H    H N
Sbjct: 66  KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125
Query: 121 IRSFTCHL--CNKGFFRKSYLKVHLLTIH 147
            + + C L  C K +   S L+ H+ T+H
Sbjct: 126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 39  DECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG 98
           + CD  F     L  H +   +    +PF C +C + F   + L  H++THTGE+   C 
Sbjct: 10  ESCDRRFSQKTNLDTHIR---IHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACD 66
Query: 99  LCFQSFYSKADLVRHMK 115
           +C + F +     RH K
Sbjct: 67  ICGRKFATLHTRDRHTK 83

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 65  RPFPC--DLCEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLN 120
           +PFPC  + CE+ F +  HL  H  THTGE++ TC    C   F +KA++ +H   R  N
Sbjct: 32  KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHF-NRFHN 90
Query: 121 IR 122
           I+
Sbjct: 91  IK 92

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	230
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-12
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-11
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	8e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	9e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-09
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-09
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	7e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	4e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	5e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 65.6 bits (161), Expect = 4e-14
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 7/119 (5%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYH---VKT 88
           G    +C  C   F +   L  H   KH     +PF C  C + +  K +L  H      
Sbjct: 4   GSSGVECPTCHKKFLSKYYLKVH-NRKH--TGEKPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 89  HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIH 147
           +  E+  TC +C ++F  + +L  HM   H     + C  C++ F +K  L+ H++ +H
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMV-SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 89  HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH--LLTI 146
            +G   V C  C + F SK  L  H + +H   + F C  C K +FRK  L  H     +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 147 H 147
           +
Sbjct: 61  N 61

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYH-VKTHT 90
            ++ F C  C  +F     L  H    H      P+ C  C Q+F+ K  L  H +K H+
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLH-MVSH--TGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

Query: 91  GER 93
           G  
Sbjct: 120 GPS 122

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 63.6 bits (156), Expect = 9e-13
 Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 16/117 (13%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLR------PFPCDLCEQRFLNKSHLAYH 85
           G+K + C EC  SF     L  H+         R      P+ C  C + F +K  L  H
Sbjct: 18  GEKPYACPECGKSFSRSDHLAEHQ---------RTHTGEKPYKCPECGKSFSDKKDLTRH 68

Query: 86  VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH 142
            +THTGE+   C  C +SF  +A+L  H +  H   + + C  C K F + ++L+ H
Sbjct: 69  QRTHTGEKPYKCPECGKSFSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAH 124

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 61.7 bits (151), Expect = 4e-12
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 16/117 (13%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLR------PFPCDLCEQRFLNKSHLAYH 85
           G+K ++C EC  SF     L  H+         R      P+ C  C + F   +HL  H
Sbjct: 74  GEKPYKCPECGKSFSQRANLRAHQ---------RTHTGEKPYACPECGKSFSQLAHLRAH 124

Query: 86  VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH 142
            +THTGE+   C  C +SF  + +L  H +  H   + + C  C K F R+  L VH
Sbjct: 125 QRTHTGEKPYKCPECGKSFSREDNLHTHQR-THTGEKPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 46.3 bits (111), Expect = 1e-06
 Identities = 17/67 (25%), Positives = 22/67 (32%), Gaps = 1/67 (1%)

Query: 76  FLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFR 135
               S          GE+   C  C +SF     L  H +  H   + + C  C K F  
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSD 61

Query: 136 KSYLKVH 142
           K  L  H
Sbjct: 62  KKDLTRH 68

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 41.3 bits (98), Expect = 8e-05
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 15/68 (22%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLR------PFPCDLCEQRFLNKSHLAYH 85
           G+K ++C EC  SF     L  H+         R      P+ C  C + F  +  L  H
Sbjct: 130 GEKPYKCPECGKSFSREDNLHTHQ---------RTHTGEKPYKCPECGKSFSRRDALNVH 180

Query: 86  VKTHTGER 93
            +THTG++
Sbjct: 181 QRTHTGKK 188

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 61.5 bits (150), Expect = 3e-12
 Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 10/123 (8%)

Query: 34  KSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQR-----FLNKSHLAYHVKT 88
              + D C   F + + L  H   +H+    + F C           F  +  L  H++ 
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 89  HTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCH--LCNKGFFRKSYLKVHLL 144
           HTGE+   C    C +S+    +L  H++  H   + + C    C+K F   S    H  
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLR-SHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

Query: 145 TIH 147
             H
Sbjct: 121 RTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 11/131 (8%)

Query: 23  LEAHITTVH---GDKSFQCDECDMSFGTHQALGRHKQCKHMDI--SLRPFPCDL--CEQR 75
           L  HI + H     K F C     S        ++    HM      +P  C    C + 
Sbjct: 19  LVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKS 78

Query: 76  FLNKSHLAYHVKTHTGERDVTC--GLCFQSFYSKADLVRHMKGRHLNIRSFTCHL--CNK 131
           +    +L  H+++HTGE+   C    C ++F + +D  +H    H N + + C L  C K
Sbjct: 79  YSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTK 138

Query: 132 GFFRKSYLKVH 142
            +   S L+ H
Sbjct: 139 RYTDPSSLRKH 149

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 38.0 bits (89), Expect = 7e-04
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 32  GDKSFQCDE--CDMSFGTHQALGRHKQCKHMDISLRPFPCDL--CEQRFLNKSHLAYHVK 87
           G+K + C+   C  +F       +H+   H +   +P+ C L  C +R+ + S L  HVK
Sbjct: 94  GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN--EKPYVCKLPGCTKRYTDPSSLRKHVK 151

Query: 88  THTG 91
           T  G
Sbjct: 152 TVHG 155

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 61.5 bits (150), Expect = 3e-12
 Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 12/111 (10%)

Query: 44  SFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGE---------RD 94
           S  + Q + +   CK +D +    P   C++ F     L  HV                 
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 95  VTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHL--CNKGFFRKSYLKVHL 143
             C    +SF +K  LV H++  H   + F C    C K F R   LK+H 
Sbjct: 63  EECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHK 112

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 58.1 bits (141), Expect = 4e-11
 Identities = 30/121 (24%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKH------MDISLRPFPCDLCEQRFLNKSHLAYH 85
              S     CD +F T   L  H   +H       +       C    + F  K  L  H
Sbjct: 22  AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81

Query: 86  VKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCHL--CNKGFFRKSYLKV 141
           ++ HTGE+   C    C + F    +L  H +  H   + F C    C++ F   S  K 
Sbjct: 82  IRVHTGEKPFPCPFPGCGKIFARSENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKK 140

Query: 142 H 142
           H
Sbjct: 141 H 141

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 20/107 (18%)

Query: 23  LEAHITTVHGDKSFQ---------CDECDMSFGTHQALGRHKQCKHMDI--SLRPFPCDL 71
           L  H+T  H     Q         C     SF       ++K   H+ +    +PFPC  
Sbjct: 41  LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA-----KYKLVNHIRVHTGEKPFPCPF 95

Query: 72  --CEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHM 114
             C + F    +L  H +THTGE+   C    C + F + +D  +HM
Sbjct: 96  PGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM 142

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 59.0 bits (144), Expect = 4e-12
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 64  LRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRS 123
           ++PF C +C + F    HL  H++THTGE+   C +C + F    +  RH      +I  
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR--DIQHILP 58

Query: 124 FTCHLCNKGFFRKSYLKVH 142
                  +   +  +L+  
Sbjct: 59  ILEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 23/74 (31%), Positives = 26/74 (35%), Gaps = 7/74 (9%)

Query: 23 LEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHL 82
          L  HI T  G+K F CD C   F       RH+          P   D  E+      HL
Sbjct: 19 LTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI-QHI---LPILEDKVEELLSKNYHL 74

Query: 83 AYHV---KTHTGER 93
             V   K   GER
Sbjct: 75 ENEVARLKKLVGER 88

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 81  HLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHL-NIRSFTCHLCNKGFFRKSYL 139
                 +TH+GE+   C +C   F     +  H+  +H  N+  F C  C+    RKS L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 140 KVHLLTIH 147
            VHL   H
Sbjct: 62  GVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 22 KLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSH 81
             +   T  G+K ++C  C   F     +  H   KH + ++  F C  C+     KS 
Sbjct: 2  SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTE-NVAKFHCPHCDTVIARKSD 60

Query: 82 LAYHVKT-HTGER 93
          L  H++  H+   
Sbjct: 61 LGVHLRKQHSYSG 73

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 66  PFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK---GRHLNIR 122
              C++C + F +  HL  H  +H+GE+  +C +C   F  K  +  H++   G     +
Sbjct: 7   GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS--VGK 64

Query: 123 SFTCHLCNKGFFRKSYLKVHLLTIH 147
            + C  C KGF R  +L  H+  +H
Sbjct: 65  PYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 32 GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVK-THT 90
          G+K + C  C + F     +  H +  H     +P+ C  C + F    HL  H+K  H+
Sbjct: 32 GEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

Query: 91 GER 93
          G  
Sbjct: 91 GPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 89  HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH 142
            +G   V C +C + F     L RH    H   + ++C +C   F RK  +  H
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLS-HSGEKPYSCPVCGLRFKRKDRMSYH 54

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIR 122
                  C + +   SHL  H++THTGE+   C    C   F    +L RH + +H   R
Sbjct: 6   HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHR 64

Query: 123 SFTCHLCNKGFFRKSYLKVHLLTIHM 148
            F C  C++ F R  +L +H+   H 
Sbjct: 65  PFQCQKCDRAFSRSDHLALHMKR-HF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 6/90 (6%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDL--CEQRFLNKSHLAYHVKTH 89
              +     C  ++     L  H +  H     +P+ CD   C  +F     L  H + H
Sbjct: 4   ATHTCDYAGCGKTYTKSSHLKAHLR-THTGE--KPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 90  TGERDVTCGLCFQSFYSKADLVRHMKGRHL 119
           TG R   C  C ++F     L  HMK RH 
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMK-RHF 89

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 56.5 bits (137), Expect = 5e-11
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 14/106 (13%)

Query: 44  SFGTHQALGRHKQCKHMDISLRPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGL-- 99
           S G+       +         R   CD   C + +   SHL  H++THTGE+   C    
Sbjct: 2   SSGSSGPDLEKR---------RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEG 52

Query: 100 CFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLT 145
           C   F    +L RH + +H   + F C +CN+ F R  +L +H+  
Sbjct: 53  CDWRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.0 bits (115), Expect = 8e-08
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 5/70 (7%)

Query: 23 LEAHITTVHGDKSFQC--DECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKS 80
          L+AH+ T  G+K ++C  + CD  F     L RH + KH     +PF C +C + F    
Sbjct: 33 LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR-KHT--GAKPFQCGVCNRSFSRSD 89

Query: 81 HLAYHVKTHT 90
          HLA H+K H 
Sbjct: 90 HLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLN 120
           +P+ C    C+ RF     L  H + HTG +   CG+C +SF     L  HMK RH N
Sbjct: 44  KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK-RHQN 100

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 11/118 (9%)

Query: 34  KSFQCD--ECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTG 91
           ++  C    C   F  + A+ +H    H     R   C  C + F+  S L  H   HTG
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLH-THGP---RVHVCAECGKAFVESSKLKRHQLVHTG 59

Query: 92  ERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCHL--CNKGFFRKSYLKVHLLT 145
           E+   C    C + F    +L  H++  H   R + C    CNK F + + LK H+LT
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILT 116

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 20/103 (19%)

Query: 23  LEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLR------PFPCDL--CEQ 74
           +  H+ T HG +   C EC  +F     L RH+                PF C    C +
Sbjct: 23  MRKHLHT-HGPRVHVCAECGKAFVESSKLKRHQ---------LVHTGEKPFQCTFEGCGK 72

Query: 75  RFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMK 115
           RF    +L  HV+ HTG+R   C    C + F    +L  H+ 
Sbjct: 73  RFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 54.3 bits (131), Expect = 2e-10
 Identities = 11/72 (15%), Positives = 19/72 (26%), Gaps = 3/72 (4%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHT---GERDVTCGLCFQSFYSKADLVRHMKGRHLNI 121
               C++C      K+ L +H + H          C  C + F     +  H    H  +
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 122 RSFTCHLCNKGF 133
                       
Sbjct: 66  LLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 52.4 bits (126), Expect = 1e-09
 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 4/70 (5%)

Query: 89  HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNI---RSFTCHLCNKGFFRKSYLKVHLLT 145
            +G   + C +C  +   KA L  H + +H        F C  C K F +   +  H   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

Query: 146 IHMQPADEAQ 155
            H       Q
Sbjct: 61  SHPALLLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.3 bits (123), Expect = 3e-09
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 32 GDKSFQCDECDMSFGTHQALGRHKQCKH-MDISLRPFPCDLCEQRFLNKSHLAYHVKTHT 90
          G    QC+ C  +     +L  H++ KH   ++   FPC+ C +RF     +A H     
Sbjct: 4  GSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

Query: 91 GERDVTC 97
              +  
Sbjct: 63 PALLLAP 69

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 6/77 (7%)

Query: 32  GDKSFQCD--ECDMSFGTHQALGRHKQCKHMDISLRPFPCD--LCEQRFLNKSHLAYHVK 87
           G     CD   C   F   Q L  HK+ +H  I  + F C    C + F  K HL  H+K
Sbjct: 4   GSSGMPCDFPGCGRIFSNRQYLNHHKKYQH--IHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 88  THTGERDVTCGLCFQSF 104
            H+  RD  C     S 
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)

Query: 65  RPFPCDL--CEQRFLNKSHLAYHVK-THTGERDVTC--GLCFQSFYSKADLVRHMKGRHL 119
              PCD   C + F N+ +L +H K  H  ++  +C    C +SF  K  L  HMK  H 
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHS 64

Query: 120 NIRSFTCHLCNKGF 133
           + R + C       
Sbjct: 65  DTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 89  HTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTC--HLCNKGFFRKSYLKVH 142
            +G   + C    C + F ++  L  H K +H++ +SF+C    C K F  K +LK H
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH 59

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.4 bits (132), Expect = 3e-10
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR 122
           RP+ C +  C++RF     L  H++ HTG++   C +C ++F     L  H++  H   +
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGEK 61

Query: 123 SFTCHLCNKGFFRKSYLKVH 142
            F C +C + F R    K H
Sbjct: 62  PFACDICGRKFARSDERKRH 81

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 50.2 bits (121), Expect = 9e-09
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 13/88 (14%)

Query: 34  KSFQC--DECDMSFGTHQALGRHKQC----KHMDISLRPFPCDLCEQRFLNKSHLAYHVK 87
           + + C  + CD  F    +L RH +     K       PF C +C + F    HL  H++
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQK-------PFQCRICMRNFSRSDHLTTHIR 55

Query: 88  THTGERDVTCGLCFQSFYSKADLVRHMK 115
           THTGE+   C +C + F    +  RH K
Sbjct: 56  THTGEKPFACDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.9 bits (110), Expect = 4e-07
 Identities = 23/78 (29%), Positives = 29/78 (37%), Gaps = 15/78 (19%)

Query: 23 LEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLR------PFPCDLCEQRF 76
          L  HI    G K FQC  C  +F     L  H          R      PF CD+C ++F
Sbjct: 22 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI---------RTHTGEKPFACDICGRKF 72

Query: 77 LNKSHLAYHVKTHTGERD 94
                  H K H  ++D
Sbjct: 73 ARSDERKRHTKIHLRQKD 90

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 54.8 bits (131), Expect = 5e-10
 Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 2/98 (2%)

Query: 23  LEAHITTVHGDKSFQCDECDMSFGTHQALGRH-KQCKHM-DISLRPFPCDLCEQRFLNKS 80
            + + +   G   F+C +C  ++ T   L  H  +  H  D +      +        K 
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66

Query: 81  HLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRH 118
            L         ++ + C  C  SF S  DL  HM    
Sbjct: 67  SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.5 bits (94), Expect = 5e-05
 Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 3/88 (3%)

Query: 80  SHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYL 139
           S    +    TG     C  C  ++ +  +L  HM            H  +    ++   
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGH--YRDDNHETDNNNPKRWSK 62

Query: 140 KVHLLTIHMQPADEAQNAIHRCYACRCA 167
                 + M+  ++AQ  + +C  C  +
Sbjct: 63  PRKRSLLEMEGKEDAQ-KVLKCMYCGHS 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 54.4 bits (132), Expect = 5e-10
 Identities = 32/123 (26%), Positives = 43/123 (34%), Gaps = 22/123 (17%)

Query: 32  GDKSFQCDE--CDMSFGTHQALGRHKQCKHMDISLR------PFPCDL--CEQRFLNKSH 81
             + F C    C+  +     L  H          R      P+ CD   CE+RF     
Sbjct: 3   EKRPFMCAYPGCNKRYFKLSHLQMHS---------RKHTGEKPYQCDFKDCERRFSRSDQ 53

Query: 82  LAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHL--CNKGFFRKSYL 139
           L  H + HTG +   C  C + F     L  H +  H   + F+C    C K F R   L
Sbjct: 54  LKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTR-THTGEKPFSCRWPSCQKKFARSDEL 112

Query: 140 KVH 142
             H
Sbjct: 113 VRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 19/103 (18%)

Query: 23  LEAHITTVHGDKSFQCD--ECDMSFGTHQALGRHKQCKHMDISLR------PFPCDLCEQ 74
           L+ H     G+K +QCD  +C+  F     L RH+         R      PF C  C++
Sbjct: 24  LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ---------RRHTGVKPFQCKTCQR 74

Query: 75  RFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMK 115
           +F    HL  H +THTGE+  +C    C + F    +LVRH  
Sbjct: 75  KFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 55.3 bits (134), Expect = 8e-10
 Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 8/122 (6%)

Query: 32  GDKSFQCDE--CDMSFGTHQALGRHKQCKHMDISLRPFPCDL--CEQRFLNKSHLAYHVK 87
           G+K+F CD   CD+ F T   + +H   +  +I +  + C    C + F   + L  H  
Sbjct: 69  GEKNFTCDSDGCDLRFTTKANMKKHFN-RFHNIKICVYVCHFENCGKAFKKHNQLKVHQF 127

Query: 88  THTGERDVTC--GLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLT 145
           +HT +    C    C + F   + L RH K  H          C+      +    H+  
Sbjct: 128 SHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186

Query: 146 IH 147
            H
Sbjct: 187 CH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 49.5 bits (119), Expect = 1e-07
 Identities = 36/137 (26%), Positives = 50/137 (36%), Gaps = 26/137 (18%)

Query: 22  KLEAHITTVHGDKSFQCDE--CDMSFGTHQALGRHKQCKHMDISLR------PFPCD--L 71
           KL+AH+    G+K F C E  C+  F +   L RH                  F CD   
Sbjct: 29  KLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS---------LTHTGEKNFTCDSDG 79

Query: 72  CEQRFLNKSHLAYHVKTHTGERDV--TCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCH 127
           C+ RF  K+++  H       +     C    C ++F     L  H    H     + C 
Sbjct: 80  CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECP 138

Query: 128 --LCNKGFFRKSYLKVH 142
              C+K F   S LK H
Sbjct: 139 HEGCDKRFSLPSRLKRH 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 9/102 (8%)

Query: 23  LEAHITTVHGDKSFQ----CDECDMSFGTHQALGRHKQCKHMDISLRPFPC--DLCEQRF 76
           ++ H    H  K        + C  +F  H  L  H Q  H      P+ C  + C++RF
Sbjct: 90  MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH-QFSH--TQQLPYECPHEGCDKRF 146

Query: 77  LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRH 118
              S L  H K H G        C     +    ++H+   H
Sbjct: 147 SLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 7/84 (8%)

Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTC--GLCFQSFYSKADLVRHMKGRHLN 120
           + + C    C   +     L  H+  HTGE+   C    C + F S   L RH    H  
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSL-THTG 69

Query: 121 IRSFTC--HLCNKGFFRKSYLKVH 142
            ++FTC    C+  F  K+ +K H
Sbjct: 70  EKNFTCDSDGCDLRFTTKANMKKH 93

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 88  THTGERDVTCGLCFQSFYSKADLVRHMK-GRHLNIRSFTCHLCNKGFFRKSYLKVHLLTI 146
           T  GE    C +C + +   ++  RH       N++ + C  C K F RK  +  H+  I
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 147 H 147
           H
Sbjct: 64  H 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 32 GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTG 91
          G+ +++C  C   +       RH        +++ +PC  C + F  K ++  HVK    
Sbjct: 7  GEHTYRCKVCSRVYTHISNFCRHYV-TSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKT--HTGERDVTCGLCFQSFYSKADLVRHMK 115
             + C +C + + + S+   H  T      +   C  CF+ F  K ++  H+K
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 52.8 bits (128), Expect = 1e-09
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSF 124
            P  C++C + F  K  L  H++ HTG +   C  C  +    + L +H++  H + R F
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDERPF 65

Query: 125 TCHLCNKGFFRKSYLKVH 142
            C +C       S L VH
Sbjct: 66  KCQICPYASRNSSQLTVH 83

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 51.3 bits (124), Expect = 4e-09
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 11/88 (12%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQC----KHMDISLRPFPCDLCEQRFLNKSHLAYHVK 87
                +C+ C   F     L  H +C    K       P+ C  C+    + S L  H++
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVK-------PYKCKTCDYAAADSSSLNKHLR 57

Query: 88  THTGERDVTCGLCFQSFYSKADLVRHMK 115
            H+ ER   C +C  +  + + L  H++
Sbjct: 58  IHSDERPFKCQICPYASRNSSQLTVHLR 85

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.7 bits (107), Expect = 1e-06
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 32 GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTG 91
          G K ++C  CD +     +L +H +  H D   RPF C +C     N S L  H+++HTG
Sbjct: 33 GVKPYKCKTCDYAAADSSSLNKHLR-IHSD--ERPFKCQICPYASRNSSQLTVHLRSHTG 89

Query: 92 ERDVTCG 98
          +   + G
Sbjct: 90 DSGPSSG 96

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 5/83 (6%)

Query: 38  CDECDMSFGTHQALGRHKQCKHMDISLRPFPCD--LCEQRFLNKSHLAYHVKTHTGERDV 95
            + C  +F  H  L  H Q  H      P+ C    C++RF   S L  H K H G    
Sbjct: 6   FENCGKAFKKHNQLKVH-QFSH--TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCK 62

Query: 96  TCGLCFQSFYSKADLVRHMKGRH 118
               C     +    ++H+   H
Sbjct: 63  KDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 45.3 bits (108), Expect = 6e-07
 Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 3/82 (3%)

Query: 68  PCDLCEQRFLNKSHLAYHVKTHTGERDVTC--GLCFQSFYSKADLVRHMKGRHLNIRSFT 125
             + C + F   + L  H  +HT +    C    C + F   + L RH K  H       
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYPCKK 63

Query: 126 CHLCNKGFFRKSYLKVHLLTIH 147
              C+      +    H+   H
Sbjct: 64  DDSCSFVGKTWTLYLKHVAECH 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKH-MDISLRPFPCDLCEQRFLNKSHLAYHVKTHT 90
           G+K + C  CD +F   Q L  H +  H  +     F C  C + F  ++ +A H     
Sbjct: 12  GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA 71

Query: 91  GERDVTCGLCFQSF 104
           G   V       S 
Sbjct: 72  GPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 50.2 bits (121), Expect = 9e-09
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 81  HLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK---GRHLNIRSFTCHLCNKGFFRKS 137
                 +THTGE+   C  C ++F  K  L  H K     +    +F C  C K F R++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 138 YLKVH 142
            +  H
Sbjct: 62  TMARH 66

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 5/73 (6%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDV----TCGLCFQSFYSKADLVRHMKGRHLN 120
           +P+ C  C++ F  K  L  H K +     V     C  C ++F  +  + RH       
Sbjct: 14  KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADN-CAG 72

Query: 121 IRSFTCHLCNKGF 133
                        
Sbjct: 73  PDGVEGENSGPSS 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 52.4 bits (127), Expect = 2e-09
 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 7/108 (6%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTG 91
           GDK + C +C  SF       RH     M + LRP+ C +C ++F  K HL  H+K HTG
Sbjct: 7   GDKLYPC-QCGKSFTHKSQRDRHMS---MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62

Query: 92  ERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYL 139
            +   C +C + F  +    RH+       +S+      +     S  
Sbjct: 63  IKPYECNICAKRFMWRDSFHRHV---TSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 37.4 bits (88), Expect = 6e-04
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 87  KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH 142
              +G++   C  C +SF  K+   RHM   HL +R + C +C K F  K +L  H
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGH 56

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 51.8 bits (123), Expect = 4e-09
 Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 20  GLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNK 79
           G    +  + V   + +QC  C+    +    G H++            C  C  RF + 
Sbjct: 1   GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-----NAAVCPYCSLRFFSP 55

Query: 80  SHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRH 118
                H ++    + +TC  C ++F S   + RH    H
Sbjct: 56  ELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.1 bits (103), Expect = 2e-06
 Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 4/85 (4%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSF 124
             + C LC  +  +      H +         C  C   F+S      H        +  
Sbjct: 15  EVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE--SKCEYKKL 70

Query: 125 TCHLCNKGFFRKSYLKVHLLTIHMQ 149
           TC  C + F     +  H + +H Q
Sbjct: 71  TCLECMRTFKSSFSIWRHQVEVHNQ 95

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 14/51 (27%), Positives = 21/51 (41%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK 115
            P  C  C     +K+ L  H + H  +R   C  C       ++L +HMK
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 32 GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTG 91
               +C EC  S  +  AL  H +  H   + RPF C+ C       S+L+ H+K   G
Sbjct: 6  SGHPEKCSECSYSCSSKAALRIH-ERIH--CTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

Query: 92 E 92
          +
Sbjct: 63 D 63

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 88  THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIH 147
           + +      C  C  S  SKA L  H +  H   R F C+ C+    + S L  H +   
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKH-MKKF 60

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSF 124
           + F C  C + F    +L  H +THT ER  TC +C ++F  +  L  H    H   + F
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY-IHSKEKPF 74

Query: 125 TCHLCNKGFFRKSYLKVH 142
            C  C KGF +   L VH
Sbjct: 75  KCQECGKGFCQSRTLAVH 92

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 23/90 (25%), Positives = 31/90 (34%), Gaps = 15/90 (16%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLR------PFPCDLCEQRFLNKSHLAYH 85
             K F C  C   F     L  H+         R      P+ CD+C + F  + HL  H
Sbjct: 14  TKKEFICKFCGRHFTKSYNLLIHE---------RTHTDERPYTCDICHKAFRRQDHLRDH 64

Query: 86  VKTHTGERDVTCGLCFQSFYSKADLVRHMK 115
              H+ E+   C  C + F     L  H  
Sbjct: 65  RYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 79  KSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSY 138
            S  +        +++  C  C + F    +L+ H +  H + R +TC +C+K F R+ +
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDH 60

Query: 139 LKVH 142
           L+ H
Sbjct: 61  LRDH 64

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 16/72 (22%), Positives = 22/72 (30%), Gaps = 15/72 (20%)

Query: 32  GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLR------PFPCDLCEQRFLNKSHLAYH 85
            ++ + CD C  +F     L  H+                PF C  C + F     LA H
Sbjct: 42  DERPYTCDICHKAFRRQDHLRDHR---------YIHSKEKPFKCQECGKGFCQSRTLAVH 92

Query: 86  VKTHTGERDVTC 97
              H      T 
Sbjct: 93  KTLHMQTSSPTA 104

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 46.3 bits (111), Expect = 1e-07
 Identities = 20/54 (37%), Positives = 32/54 (59%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRH 118
           R F C++C + F  + HL  H ++HT E+   CGLC ++F  +  L+RH +  H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 16/66 (24%)

Query: 34 KSFQCDECDMSFGTHQALGRHKQCKHMDISLR------PFPCDLCEQRFLNKSHLAYHV- 86
          +SF C+ C  +F   + L RH          R      P+PC LC + F  +  L  H  
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHY---------RSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51

Query: 87 KTHTGE 92
          K H+G 
Sbjct: 52 KIHSGN 57

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 35  SFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERD 94
           SF C  C  SF     L  H    H D   RP+PC  C +RF  KS +  H   HTGE+ 
Sbjct: 1   SFDCKICGKSFKRSSTLSTH-LLIHSD--TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP 57

Query: 95  VTCGLCFQSFYSKADLVRHMK 115
             C +C ++F   ++L+ H +
Sbjct: 58  HKCQVCGKAFSQSSNLITHSR 78

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 45.9 bits (110), Expect = 3e-07
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)

Query: 69  CDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHL 128
           C +C + F   S L+ H+  H+  R   C  C + F+ K+D+ +H    H   +   C +
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKCQV 62

Query: 129 CNKGFFRKSYLKVH 142
           C K F + S L  H
Sbjct: 63  CGKAFSQSSNLITH 76

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.0 bits (107), Expect = 5e-07
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 23 LEAHITTVHGDKSFQCD--ECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKS 80
          L  ++      + + C    CD  F     L RH +  H     +PF C +C + F    
Sbjct: 9  LLNYVVP--KMRPYACPVESCDRRFSRSDELTRHIR-IHTGQ--KPFQCRICMRNFSRSD 63

Query: 81 HLAYHVKTHT 90
          HL  H++THT
Sbjct: 64 HLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRH 118
           RP+ C +  C++RF     L  H++ HTG++   C +C ++F     L  H++  H
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-TH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 80  SHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKS 137
           ++L  +       R   C +  C + F    +L RH++  H   + F C +C + F R  
Sbjct: 7   NNLLNY--VVPKMRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSD 63

Query: 138 YLKVHLLT 145
           +L  H+ T
Sbjct: 64  HLTTHIRT 71

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 80  SHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYL 139
            H  +H      ++   C  C  SF  K +L  H    H   + + C++C   F R + L
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANL 61

Query: 140 KVH 142
           K H
Sbjct: 62  KTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.4 bits (101), Expect = 4e-06
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 15/81 (18%)

Query: 19 MGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLR------PFPCDLC 72
          MG     H    H DK ++CD C  SF     L  HK                P+ C++C
Sbjct: 1  MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHK---------TVHTGEKPYRCNIC 51

Query: 73 EQRFLNKSHLAYHVKTHTGER 93
            +F   ++L  H + H+GE+
Sbjct: 52 GAQFNRPANLKTHTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 66  PFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK 115
           P+ CD C+  F  K +LA H   HTGE+   C +C   F   A+L  H +
Sbjct: 17  PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 42.2 bits (99), Expect = 3e-06
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC 100
           +   C++C + F +  HL  H  +H+GE+  + G  
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 43.0 bits (101), Expect = 5e-06
 Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 8/66 (12%)

Query: 88  THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC--------NKGFFRKSYL 139
               +       C ++F +  +LV H+   H+       H+C         K F  K  L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 140 KVHLLT 145
             H+  
Sbjct: 79  VNHIRV 84

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 42.6 bits (100), Expect = 6e-06
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 10/80 (12%)

Query: 56  QCKHMDISLRPFPCDLCEQRFLNKSHLAYHV-KTHTGERD--------VTCGLCFQSFYS 106
            CK +D +    P   C++ F     L  HV   H G  +          C    +SF +
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74

Query: 107 KADLVRHMKGRHLNIRSFTC 126
           K  LV H++  H   +S   
Sbjct: 75  KYKLVNHIR-VHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.9 bits (98), Expect = 1e-05
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 6/73 (8%)

Query: 31 HGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRP------FPCDLCEQRFLNKSHLAY 84
              S     CD +F T   L  H   +H+    +         C    + F  K  L  
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 85 HVKTHTGERDVTC 97
          H++ HTGE+    
Sbjct: 81 HIRVHTGEKSGPS 93

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRH 113
           R + CD C + F + S L+ H +THTGE+   C  C ++F  ++ L+ H
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 79  KSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSY 138
                         R   C  C +SF   +DL +H +  H   + + C  C K F ++S+
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSH 61

Query: 139 LKVH 142
           L  H
Sbjct: 62  LIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.3 bits (93), Expect = 5e-05
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 15/68 (22%)

Query: 32 GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLR------PFPCDLCEQRFLNKSHLAYH 85
            + ++CDEC  SF     L +H+         R      P+ CD C + F+ +SHL  H
Sbjct: 15 ERRRYKCDECGKSFSHSSDLSKHR---------RTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 86 VKTHTGER 93
           + HTG  
Sbjct: 66 HRVHTGSG 73

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.1 bits (93), Expect = 3e-05
 Identities = 19/47 (40%), Positives = 25/47 (53%)

Query: 69  CDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK 115
           C+ C  R    S L  H++THT  R   C  C  SF +K +L +HMK
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.9 bits (90), Expect = 6e-05
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 36 FQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGER 93
          + C+EC +       L +H +        RP+ C  C   F  K +L  H+K+    +
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDV---RPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGER 93
          +P+PC++C  RF +   L  H++ HTG  
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIHTGSG 38

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRH 113
           +P+ C  C + F   S L  H + HTGE+   C  C ++F   + L+ H
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 32 GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTG 91
          G+K + C EC  +F     L +H Q  H     +P+ C  C + F   S L  H + HT 
Sbjct: 11 GEKPYGCVECGKAFSRSSILVQH-QRVHT--GEKPYKCLECGKAFSQNSGLINHQRIHTS 67

Query: 92 ER 93
            
Sbjct: 68 GP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 82  LAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKV 141
            +     H+GE+   C  C ++F   + LV+H +  H   + + C  C K F + S L  
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLIN 60

Query: 142 H 142
           H
Sbjct: 61  H 61

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.1 bits (89), Expect = 7e-05
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG 98
          +P+ C  C++ F + + L  H K HT +   + G
Sbjct: 9  KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG 42

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGER 93
          +P+ C+ C  RF+  +HL  HV  HTG  
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVLIHTGSG 38

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 10/62 (16%)

Query: 32 GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTG 91
          GD+S +C +C + F     L R K             C+ C +    ++ L       +G
Sbjct: 15 GDRSQKCSKCGIIFIRRSTLSRRK----------TPMCEKCRKDSCQEAALNKDEGNESG 64

Query: 92 ER 93
          ++
Sbjct: 65 KK 66

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 8/63 (12%)

Query: 80  SHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYL 139
                  K H G+R   C  C   F  ++ L R         ++  C  C K   +++ L
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEAAL 55

Query: 140 KVH 142
              
Sbjct: 56  NKD 58

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 37.6 bits (86), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTG 91
          +P+ C +C  RF  K  ++YHV++H G
Sbjct: 9  KPYSCPVCGLRFKRKDRMSYHVRSHDG 35

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC 97
          +PF C  CE+ F +KS+L  H +TH  E+    
Sbjct: 9  KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC 97
          RP+ C+ C + F   SHL  H+K H  E+    
Sbjct: 11 RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 39.1 bits (90), Expect = 2e-04
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 3/72 (4%)

Query: 76  FLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFR 135
            L++S   Y +          C LC   F S   L +H++       +  C +C K F  
Sbjct: 56  LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTS 112

Query: 136 KSYLKVHLLTIH 147
                 H+   H
Sbjct: 113 TDSALDHVCKKH 124

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.4 bits (88), Expect = 4e-04
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRS 123
             F C LC   F +   L  H++    E    C +C + F S    + H+  +H    S
Sbjct: 73  SQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNICVS 129

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG 98
           P+ C  C + F  K  L  H +TH GE   + G
Sbjct: 9  NPYECSECGKAFNRKDQLISHQRTHAGESGPSSG 42

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 65  RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMK 115
           R   C    C + +   SHL  H +THTGE+  +C    C + F    +L RH +
Sbjct: 16  RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR 70

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 10/49 (20%), Positives = 17/49 (34%)

Query: 85  HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGF 133
              + +  +   C  C + F     L  H+K  H + R   C +   G 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVK-THTGERDVTCGLCFQSF 104
           +P+ C  C + F    HL  H+K  HT ER   C +     
Sbjct: 11  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG 98
          +P+ C+ C++ F  KS+L  H +THTGE   + G
Sbjct: 11 KPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG 44

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 35.8 bits (83), Expect = 4e-04
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGER 93
          R F C++C + F  + HL  H ++HT E+
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.0 bits (83), Expect = 5e-04
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG 98
           PF C  C++ F  +++L  H +TH  +   + G
Sbjct: 11 NPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG 44

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.9 bits (84), Expect = 5e-04
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG 98
           P+ C  C + F  K  L  H KTH+G+   + G
Sbjct: 11 NPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 66 PFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG 98
          P+ C+ C + F +KS+L  H +THTGE   + G
Sbjct: 12 PYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG 44

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	230
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.9
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.79
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.79
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.78
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.78
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.76
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.72
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.71
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.7
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.69
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.69
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.68
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.68
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.66
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.66
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.64
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.64
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.63
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.63
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.6
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.59
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.57
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.57
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.56
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.56
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.56
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.55
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.54
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.53
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.52
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.52
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.51
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.51
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.51
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.51
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.5
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.5
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.5
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.49
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.49
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.48
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.47
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.45
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.44
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.44
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.43
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.42
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.4
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.39
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.35
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.32
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.31
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.29
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.22
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.2
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.19
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.18
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.18
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.17
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.15
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.15
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.14
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.1
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.1
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.1
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.03
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.01
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.99
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.98
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.98
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.97
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.97
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.97
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.96
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.94
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.93
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.93
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.93
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.93
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.92
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.92
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.91
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.91
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.9
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.89
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.87
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.87
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.87
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.81
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.8
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.79
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.79
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.79
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.78
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.78
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.74
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.7
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.7
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.7
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.63
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.62
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.55
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.54
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.53
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.5
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.48
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.42
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.39
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.39
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.37
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.34
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.31
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.29
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.21
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.17
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.15
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.12
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.11
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.11
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.11
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.09
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.09
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.09
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.08
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.07
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.07
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.07
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.06
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.04
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.03
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.03
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.02
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.01
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.01
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.01
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.0
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.99
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.99
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.99
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.99
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.98
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.23
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.96
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.96
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.95
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.95
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.94
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.17
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.91
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.91
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.14
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.11
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.07
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.01
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.79
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.77
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.63
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.62
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.53
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.51
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.28
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.13
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.99
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.79
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.78
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.63
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.08
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.87
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	92.15
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	88.69
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	86.89
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	86.68
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	86.32
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	86.01
3f2k_A	226	Histone-lysine N-methyltransferase setmar; histone	83.82
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	82.28
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	81.83

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.3e-38  Score=238.96  Aligned_cols=169  Identities=27%  Similarity=0.479  Sum_probs=144.5

Q ss_pred             hhhhhhhhhhhhhccCHHHHHHHHHhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHH
Q psy14799          4 SFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLA   83 (230)
Q Consensus         4 ~~~c~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (230)
                      +|.|+.   |++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|+++|++.   ++|.|+.|++.|.+...|.
T Consensus        21 ~~~C~~---C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~   94 (190)
T 2i13_A           21 PYACPE---CGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGE---KPYKCPECGKSFSQRANLR   94 (190)
T ss_dssp             -------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCC---CCEECTTTCCEESCHHHHH
T ss_pred             CCcCCC---CccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCC---CCccCcccCCccCCHHHHH
Confidence            566665   8889999999999999999999999999999999999999999999887   7899999999999999999


Q ss_pred             HhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCChhhhhhccCCCC
Q psy14799         84 YHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYA  163 (230)
Q Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~  163 (230)
                      .|+++|+++++|.|+.|++.|.+...|..|++ .|.++++|.|++|++.|.+.+.|..| ...|.++++|.|.       
T Consensus        95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~~~~~~C~-------  165 (190)
T 2i13_A           95 AHQRTHTGEKPYACPECGKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTH-QRTHTGEKPYKCP-------  165 (190)
T ss_dssp             HHHHHHHTCCCEECTTTCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHH-HHHHHCCCCEECT-------
T ss_pred             HHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH-HhCCCCCeECCCCCcccCCHHHHHHH-HHhcCCCCCeECC-------
Confidence            99999999999999999999999999999999 89999999999999999999999999 6678888898885       


Q ss_pred             CCCCCcccccccccCCccccccccCCccccccccccCCCC
Q psy14799        164 CRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERNRQP  203 (230)
Q Consensus       164 c~~~~~~~~~~~h~~~~C~~~f~~~~~l~~H~~~h~~~~~  203 (230)
                                      +|++.|.+...|..|+++|+|++|
T Consensus       166 ----------------~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          166 ----------------ECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             ----------------TTCCEESSHHHHHHHHTTC-----
T ss_pred             ----------------CCCCccCCHHHHHHHHHhcCCCCC
Confidence                            999999999999999999998864

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=8.9e-34  Score=212.55  Aligned_cols=169  Identities=25%  Similarity=0.422  Sum_probs=149.6

Q ss_pred             hhhhhhhhhhhhhccCHHHHHHHHHhhcCCCcccc--cccccccCChHHHHHhHhccCCCCCCCccccc--ccccccCCH
Q psy14799          4 SFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQC--DECDMSFGTHQALGRHKQCKHMDISLRPFPCD--LCEQRFLNK   79 (230)
Q Consensus         4 ~~~c~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~   79 (230)
                      +|.|. |+.|++.|.+...|..|+++|+++++|.|  +.|++.|.+...|..|+++|++.   ++|.|+  .|++.|.+.
T Consensus        12 ~~~C~-~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~   87 (190)
T 1tf6_A           12 RYICS-FADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE---KNFTCDSDGCDLRFTTK   87 (190)
T ss_dssp             CCBCS-STTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTC---CCEECCSSSCCCEESCH
T ss_pred             ceeCC-CCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCC---CceeCCCCCCCCccCCH
Confidence            45663 24588899999999999999999999999  88999999999999999998887   899999  899999999


Q ss_pred             HHHHHhH-HHh-cCCCceec--ccccccccCHHHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhhcCCCChh
Q psy14799         80 SHLAYHV-KTH-TGERDVTC--GLCFQSFYSKADLVRHMKGRHLNIRSFTCHL--CNKGFFRKSYLKVHLLTIHMQPADE  153 (230)
Q Consensus        80 ~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~  153 (230)
                      ..|..|+ +.| .++++|.|  +.|++.|.+...|..|++ .|.+++||.|++  |++.|.+.+.|..| +..|.+   |
T Consensus        88 ~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~F~~~~~L~~H-~~~H~~---~  162 (190)
T 1tf6_A           88 ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRH-EKVHAG---Y  162 (190)
T ss_dssp             HHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG-GGSSSCSSBCCSSSCCCBCSSHHHHHHH-HTSSCS---C
T ss_pred             HHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH-HhCCCCCccCCCCCCCchhcCHHHHHHH-HHHhCC---C
Confidence            9999999 566 46789999  889999999999999999 899999999988  99999999999999 557766   4


Q ss_pred             hhhhccCCCCCCCCCcccccccccCCccccccccCCccccccccccCC
Q psy14799        154 AQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERNR  201 (230)
Q Consensus       154 ~c~~~~~C~~c~~~~~~~~~~~h~~~~C~~~f~~~~~l~~H~~~h~~~  201 (230)
                      .      |..|              ..|++.|.+...|..|+++|+++
T Consensus       163 ~------C~~~--------------~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          163 P------CKKD--------------DSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             C------CCST--------------TTCCCCCSCHHHHHHHHTTCC--
T ss_pred             c------CCCC--------------CcCCCccccHHHHHHHHHhhcCC
Confidence            4      4443              24999999999999999999874

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2e-34  Score=216.06  Aligned_cols=177  Identities=25%  Similarity=0.453  Sum_probs=135.5

Q ss_pred             HHHHHHHHHhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceeccc
Q psy14799         20 GLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGL   99 (230)
Q Consensus        20 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   99 (230)
                      ...|..|+..+.++++|.|+.|++.|.+...|..|++.|++.   ++|.|+.|++.|.+...|..|+++|.++++|.|+.
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   82 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGE---KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPE   82 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC------CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTT
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCC---CCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcc
Confidence            456889999999999999999999999999999999998877   79999999999999999999999999999999999


Q ss_pred             ccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCcccccccccCC
Q psy14799        100 CFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGG  179 (230)
Q Consensus       100 C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~~~  179 (230)
                      |++.|.+...|..|++ .|.++++|.|++|++.|.+.+.|..| ...|.++++|.|.                       
T Consensus        83 C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~-----------------------  137 (190)
T 2i13_A           83 CGKSFSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAH-QRTHTGEKPYKCP-----------------------  137 (190)
T ss_dssp             TCCEESCHHHHHHHHH-HHHTCCCEECTTTCCEESSHHHHHHH-HHHHHCCCCEECT-----------------------
T ss_pred             cCCccCCHHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHH-HHHhCCCCCeECC-----------------------
Confidence            9999999999999999 88899999999999999999999999 6678888898875                       


Q ss_pred             ccccccccCCccccccccccCCCCCCCCCCCchhHHhHHHhhhhhc
Q psy14799        180 ICGSMWRVETWHPCHLLTERNRQPPYSQDLSPCDIFLLQKLKNQLN  225 (230)
Q Consensus       180 ~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (230)
                      +|++.|.+...|..|+++|++++ ||.++..+-.|.....+..++.
T Consensus       138 ~C~~~f~~~~~L~~H~~~H~~~~-~~~C~~C~~~f~~~~~L~~H~~  182 (190)
T 2i13_A          138 ECGKSFSREDNLHTHQRTHTGEK-PYKCPECGKSFSRRDALNVHQR  182 (190)
T ss_dssp             TTCCEESCHHHHHHHHHHHHCCC-CEECTTTCCEESSHHHHHHHHT
T ss_pred             CCCcccCCHHHHHHHHHhcCCCC-CeECCCCCCccCCHHHHHHHHH
Confidence            99999999999999999998775 6777776666666666666543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.96  E-value=3e-30  Score=187.03  Aligned_cols=145  Identities=21%  Similarity=0.375  Sum_probs=92.3

Q ss_pred             CcccccccccccCChHHHHHhHhccCCCCCCCcccccc-----cccccCCHHHHHHhHHHhcCCCceeccc--ccccccC
Q psy14799         34 KSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDL-----CEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYS  106 (230)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~-----C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~  106 (230)
                      .+|.|+.|++.|.+...|..|++.++...+.++|.|++     |++.|.+...|..|+++|+++++|.|++  |++.|.+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            35666666666666666666666322222225566553     2366777777777777777767777764  7777777


Q ss_pred             HHHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCcccccccccCCccccc
Q psy14799        107 KADLVRHMKGRHLNIRSFTCHL--CNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSM  184 (230)
Q Consensus       107 ~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~~~~C~~~  184 (230)
                      ...|..|++ .|.++++|.|++  |++.|.+.+.|..|++..|.++++|.|..                     +.|++.
T Consensus        82 ~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~---------------------~~C~~~  139 (155)
T 2gli_A           82 LENLKTHLR-SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKL---------------------PGCTKR  139 (155)
T ss_dssp             HHHHHHHHH-HTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCS---------------------TTTCCE
T ss_pred             HHHHHHHHH-HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCC---------------------CCCccc
Confidence            777777776 666666777776  77777777777777556676666666541                     127777


Q ss_pred             cccCCccccccccccC
Q psy14799        185 WRVETWHPCHLLTERN  200 (230)
Q Consensus       185 f~~~~~l~~H~~~h~~  200 (230)
                      |.+...|..|+++|+|
T Consensus       140 f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          140 YTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             ESSHHHHHHHHHHSCC
T ss_pred             cCCHHHHHHHHHhhcC
Confidence            7777777777776654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1e-29  Score=190.39  Aligned_cols=165  Identities=25%  Similarity=0.428  Sum_probs=141.3

Q ss_pred             cCCCcccc--cccccccCChHHHHHhHhccCCCCCCCcccc--cccccccCCHHHHHHhHHHhcCCCceecc--cccccc
Q psy14799         31 HGDKSFQC--DECDMSFGTHQALGRHKQCKHMDISLRPFPC--DLCEQRFLNKSHLAYHVKTHTGERDVTCG--LCFQSF  104 (230)
Q Consensus        31 ~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f  104 (230)
                      .++++|.|  +.|++.|.+...|..|+++|.+.   ++|.|  +.|++.|.+...|..|+++|.++++|.|+  .|++.|
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   84 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGE---KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRF   84 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCC---CSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEE
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCC---CCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCcc
Confidence            35788999  68999999999999999999887   89999  88999999999999999999999999999  899999


Q ss_pred             cCHHHHHHHHHhhc-CCCCcccc--cccccccCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCcccccccccCCcc
Q psy14799        105 YSKADLVRHMKGRH-LNIRSFTC--HLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGIC  181 (230)
Q Consensus       105 ~~~~~l~~H~~~~H-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~~~~C  181 (230)
                      .+...|..|++..| .++++|.|  +.|++.|.+.+.|..| ...|.+++||.|+.                     ++|
T Consensus        85 ~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H-~~~H~~~~~~~C~~---------------------~~C  142 (190)
T 1tf6_A           85 TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH-QFSHTQQLPYECPH---------------------EGC  142 (190)
T ss_dssp             SCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHH-HGGGSSSCSSBCCS---------------------SSC
T ss_pred             CCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHH-HHHhCCCCCccCCC---------------------CCC
Confidence            99999999995578 57889999  8899999999999999 66899999999851                     149


Q ss_pred             ccccccCCccccccccccCCCCCCCCCC---CchhHHhHHHhhhhh
Q psy14799        182 GSMWRVETWHPCHLLTERNRQPPYSQDL---SPCDIFLLQKLKNQL  224 (230)
Q Consensus       182 ~~~f~~~~~l~~H~~~h~~~~~~~~~~~---~~~~~~~~~~~~~~~  224 (230)
                      ++.|.+...|..|+++|++    |.++.   .+-.|.....+..++
T Consensus       143 ~k~F~~~~~L~~H~~~H~~----~~C~~~~~C~~~f~~~~~l~~H~  184 (190)
T 1tf6_A          143 DKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWTLYLKHV  184 (190)
T ss_dssp             CCBCSSHHHHHHHHTSSCS----CCCCSTTTCCCCCSCHHHHHHHH
T ss_pred             CchhcCHHHHHHHHHHhCC----CcCCCCCcCCCccccHHHHHHHH
Confidence            9999999999999999988    44444   333444444454444

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=1.6e-28  Score=177.95  Aligned_cols=135  Identities=27%  Similarity=0.505  Sum_probs=123.5

Q ss_pred             hhhhhhhccCHHHHHHHHH---hhcCCCccccccc-----ccccCChHHHHHhHhccCCCCCCCcccccc--cccccCCH
Q psy14799         10 WNKNYFFFLMGLKLEAHIT---TVHGDKSFQCDEC-----DMSFGTHQALGRHKQCKHMDISLRPFPCDL--CEQRFLNK   79 (230)
Q Consensus        10 C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~   79 (230)
                      |..|++.|.+...|..|++   +|.++++|.|+.|     ++.|.+...|..|+++|++.   ++|.|++  |++.|.+.
T Consensus         6 C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~   82 (155)
T 2gli_A            6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE---KPHKCTFEGCRKSYSRL   82 (155)
T ss_dssp             BTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC---CCCCCCSTTCCCCCSSH
T ss_pred             cCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCC---CCccCCCCCCCCcccCH
Confidence            4458889999999999998   6778899998753     49999999999999999887   7999986  99999999


Q ss_pred             HHHHHhHHHhcCCCceeccc--ccccccCHHHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhhc
Q psy14799         80 SHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCHL--CNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus        80 ~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H  147 (230)
                      ..|..|+++|+++++|.|++  |++.|.+...|..|++..|.++++|.|++  |++.|.+.+.|..|++..|
T Consensus        83 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           83 ENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             HHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             HHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            99999999999999999998  99999999999999944999999999998  9999999999999966554

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=4e-26  Score=159.06  Aligned_cols=117  Identities=26%  Similarity=0.594  Sum_probs=105.6

Q ss_pred             cCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHH---hcCCCceecccccccccCH
Q psy14799         31 HGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKT---HTGERDVTCGLCFQSFYSK  107 (230)
Q Consensus        31 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~  107 (230)
                      +++++|.|+.|++.|.+...|..|+++|++.   ++|.|++|++.|.+...|..|+..   +.++++|.|++|++.|.+.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~   79 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGE---KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRR   79 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSC---CSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCC---CCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCH
Confidence            4678899999999999999999999988877   789999999999999999999985   5678899999999999999


Q ss_pred             HHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCC
Q psy14799        108 ADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPA  151 (230)
Q Consensus       108 ~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  151 (230)
                      ..|..|++ .|.+++||.|++|++.|.+.+.|.+|++..|.++.
T Consensus        80 ~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           80 MELRLHMV-SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHH-HHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHHH-HcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            99999998 89899999999999999999999999888887754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=4.7e-25  Score=153.57  Aligned_cols=116  Identities=28%  Similarity=0.466  Sum_probs=106.3

Q ss_pred             hhhhhhhhhhhhhccCHHHHHHHHHhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHH
Q psy14799          4 SFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLA   83 (230)
Q Consensus         4 ~~~c~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (230)
                      +|.|..   |++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|+..++...+.++|.|++|++.|.+...|.
T Consensus         7 ~~~C~~---C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            7 GVECPT---CHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             SCCCTT---TCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCC---CCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            456665   88899999999999999999999999999999999999999999765555558999999999999999999


Q ss_pred             HhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCC
Q psy14799         84 YHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR  122 (230)
Q Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (230)
                      .|+++|+++++|.|++|++.|.+...|..|++..|.++.
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            999999999999999999999999999999986787754

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=5.3e-25  Score=152.27  Aligned_cols=110  Identities=28%  Similarity=0.583  Sum_probs=102.7

Q ss_pred             cCCCcccccc--cccccCChHHHHHhHhccCCCCCCCccccc--ccccccCCHHHHHHhHHHhcCCCceecccccccccC
Q psy14799         31 HGDKSFQCDE--CDMSFGTHQALGRHKQCKHMDISLRPFPCD--LCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYS  106 (230)
Q Consensus        31 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  106 (230)
                      +++++|.|+.  |++.|.+...|..|+++|.+.   ++|.|+  .|++.|.+...|..|+++|+++++|.|+.|++.|.+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   78 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGE---KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSR   78 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTT---CCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCC---CCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCC
Confidence            4678999987  999999999999999998877   789999  799999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCcccc--cccccccCChHHHHHHHH
Q psy14799        107 KADLVRHMKGRHLNIRSFTC--HLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus       107 ~~~l~~H~~~~H~~~~~~~C--~~C~~~f~~~~~l~~H~~  144 (230)
                      ...|..|++ .|.++++|.|  +.|++.|.+.+.|..|++
T Consensus        79 ~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  117 (119)
T 2jp9_A           79 SDHLKTHTR-THTGEKPFSCRWPSCQKKFARSDELVRHHN  117 (119)
T ss_dssp             HHHHHHHHH-HHHTCCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             HHHHHHHHH-HhcCCCCeeCCCCCCccccCCHHHHHHHHh
Confidence            999999999 8999999999  889999999999999943

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=1.6e-25  Score=157.64  Aligned_cols=105  Identities=18%  Similarity=0.394  Sum_probs=84.2

Q ss_pred             HhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccc
Q psy14799         53 RHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKG  132 (230)
Q Consensus        53 ~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~  132 (230)
                      .|..++.|.   ++|.|++|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|++ .|.+++||.|++|++.
T Consensus        12 h~~~~h~Ge---k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~   87 (133)
T 2lt7_A           12 HYELIVDGR---VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEI-HHTGERRYQCLACGKS   87 (133)
T ss_dssp             EEEEEETTE---EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHH-HHHTCCCEEESSSCCE
T ss_pred             hceeecCCC---cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhcc-ccCCCccccCCCCCCC
Confidence            344445554   789999999999999999999999999999999999999999999999988 8888899999999999


Q ss_pred             cCChHHHHHHHHhhcCCCChhhhhhccCCC
Q psy14799        133 FFRKSYLKVHLLTIHMQPADEAQNAIHRCY  162 (230)
Q Consensus       133 f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~  162 (230)
                      |.+.+.|..|+++.| +++|+.+...++|.
T Consensus        88 F~~~~~L~~H~~~hh-~~~p~~~~k~~~C~  116 (133)
T 2lt7_A           88 FINYQFMSSHIKSVH-SQDPSGDSKLYRLH  116 (133)
T ss_dssp             ESSHHHHHHHHHHHT-CCCTTSSSCCEEEC
T ss_pred             cCCHHHHHHHhHHhc-CCCCCCCCCCeecC
Confidence            999999999955555 45565555444444

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.91  E-value=1.6e-24  Score=156.89  Aligned_cols=123  Identities=25%  Similarity=0.432  Sum_probs=110.2

Q ss_pred             CCCcccccccccccCChHHHHHhHhccCCCCCC------CcccccccccccCCHHHHHHhHHHhcCCCceeccc--cccc
Q psy14799         32 GDKSFQCDECDMSFGTHQALGRHKQCKHMDISL------RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQS  103 (230)
Q Consensus        32 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~  103 (230)
                      .+.+|.|..|++.|.+...|..|++.+|.....      .+|.|++|++.|.+...|..|+++|+++++|.|.+  |++.
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            456799999999999999999999985544211      12899999999999999999999999999999998  9999


Q ss_pred             ccCHHHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHHHhhcCCCChhhhh
Q psy14799        104 FYSKADLVRHMKGRHLNIRSFTCHL--CNKGFFRKSYLKVHLLTIHMQPADEAQN  156 (230)
Q Consensus       104 f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~c~  156 (230)
                      |.+...|..|++ .|.++++|.|++  |++.|.+.+.|.+| +..|.+++||.|.
T Consensus       102 f~~~~~L~~H~~-~h~~~~~~~C~~~~C~k~f~~~~~L~~H-~~~H~~~k~~~c~  154 (155)
T 2rpc_A          102 FARSENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKH-MHVHTSDKSGPSS  154 (155)
T ss_dssp             ESCHHHHHHHHT-TTCSSCSBCCSSTTCCCCBSSHHHHHHS-STTTTSCCCSCSC
T ss_pred             cCCHHHHHHHHH-hhCCCCCccCCCCCCCCccCCHHHHHHH-HHHhcCCCCCCCC
Confidence            999999999999 999999999997  99999999999999 6789999998874

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=9.1e-25  Score=152.26  Aligned_cols=116  Identities=28%  Similarity=0.556  Sum_probs=98.3

Q ss_pred             CCCccccc--ccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceeccc--ccccccCH
Q psy14799         32 GDKSFQCD--ECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSK  107 (230)
Q Consensus        32 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~  107 (230)
                      ++++|.|+  .|++.|.+...|..|+++| +.   ++|.|++|++.|.+...|..|+++|+++++|.|++  |++.|.+.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   77 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GP---RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLD   77 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SC---CCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CC---CCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCH
Confidence            35689998  8999999999999999887 44   78999999999999999999999999999999986  99999999


Q ss_pred             HHHHHHHHhhcCCCCccccc--ccccccCChHHHHHHHHhhcCCCChh
Q psy14799        108 ADLVRHMKGRHLNIRSFTCH--LCNKGFFRKSYLKVHLLTIHMQPADE  153 (230)
Q Consensus       108 ~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~  153 (230)
                      ..|..|++ .|.++++|.|+  .|++.|.+.+.|..| ...|.+++++
T Consensus        78 ~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H-~~~H~~~k~~  123 (124)
T 1ubd_C           78 FNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSH-ILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHH-HHHCCCCCCCCSTTCCCCCSSTTTTHHH-HHHHC-----
T ss_pred             HHHHHHHH-HhCCCCceECCCCCCCCccCCHHHHHHH-HHHHcccccC
Confidence            99999998 88899999996  499999999999999 5567777654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=1.9e-25  Score=157.32  Aligned_cols=108  Identities=27%  Similarity=0.446  Sum_probs=97.6

Q ss_pred             HHHhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceeccccccccc
Q psy14799         26 HITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFY  105 (230)
Q Consensus        26 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  105 (230)
                      |.++|.|+++|.|++|++.|.+...|..|+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~   89 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWE---KKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFI   89 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCC---SCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEES
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCC---CCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcC
Confidence            445678999999999999999999999999999877   89999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHhhcCC-----CCcccccccccccCCh
Q psy14799        106 SKADLVRHMKGRHLN-----IRSFTCHLCNKGFFRK  136 (230)
Q Consensus       106 ~~~~l~~H~~~~H~~-----~~~~~C~~C~~~f~~~  136 (230)
                      +...|..|++..|..     .++|.|..|++.|...
T Consensus        90 ~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           90 NYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             SHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            999999999944432     3569999999988754

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=5.4e-25  Score=152.22  Aligned_cols=112  Identities=29%  Similarity=0.549  Sum_probs=103.9

Q ss_pred             CCcccccc--cccccCCHHHHHHhHHHhcCCCceecc--cccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHH
Q psy14799         64 LRPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCG--LCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYL  139 (230)
Q Consensus        64 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l  139 (230)
                      .++|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++ .|.++++|.|++|++.|.+.+.|
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHH-HcCCCCCccCCccCchhCCHHHH
Confidence            37899997  999999999999999999999999999  79999999999999999 89999999999999999999999


Q ss_pred             HHHHHhhcCCCChhhhhhccCCCCCCCCCcccccccccCCccccccccCCccccccccc
Q psy14799        140 KVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTE  198 (230)
Q Consensus       140 ~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~~~~C~~~f~~~~~l~~H~~~h  198 (230)
                      ..| ...|.++++|.|..                     ++|++.|.+...|..|+++|
T Consensus        83 ~~H-~~~h~~~~~~~C~~---------------------~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTH-TRTHTGEKPFSCRW---------------------PSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHH-HHHHHTCCCEECCS---------------------TTCCCEESSHHHHHHHHHTC
T ss_pred             HHH-HHHhcCCCCeeCCC---------------------CCCccccCCHHHHHHHHhcC
Confidence            999 56788888998831                     28999999999999999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=8e-25  Score=152.55  Aligned_cols=115  Identities=27%  Similarity=0.466  Sum_probs=102.6

Q ss_pred             Cccccc--ccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccc--cccccCChHHHH
Q psy14799         65 RPFPCD--LCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHL--CNKGFFRKSYLK  140 (230)
Q Consensus        65 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~  140 (230)
                      ++|.|+  .|++.|.+...|..|+++| ++++|.|+.|++.|.+...|..|++ .|.++++|.|++  |++.|.+.+.|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGG-GTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            689999  8999999999999999999 8899999999999999999999999 899999999986  999999999999


Q ss_pred             HHHHhhcCCCChhhhhhccCCCCCCCCCcccccccccCCccccccccCCccccccccccCCCC
Q psy14799        141 VHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLLTERNRQP  203 (230)
Q Consensus       141 ~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~~~~C~~~f~~~~~l~~H~~~h~~~~~  203 (230)
                      .| ...|.++++|.|+.                     +.|++.|.+...|..|+++|+++++
T Consensus        82 ~H-~~~h~~~~~~~C~~---------------------~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           82 TH-VRIHTGDRPYVCPF---------------------DGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             HH-HHHHHCCCCCCCCS---------------------TTCCCCCSSTTTTHHHHHHHC----
T ss_pred             HH-HHHhCCCCceECCC---------------------CCCCCccCCHHHHHHHHHHHccccc
Confidence            99 66788888888751                     1699999999999999999988764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.90  E-value=1.4e-24  Score=157.13  Aligned_cols=114  Identities=27%  Similarity=0.444  Sum_probs=106.5

Q ss_pred             hhhhhhhccCHHHHHHHHHh-hcCCCc--------ccccccccccCChHHHHHhHhccCCCCCCCcccccc--cccccCC
Q psy14799         10 WNKNYFFFLMGLKLEAHITT-VHGDKS--------FQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDL--CEQRFLN   78 (230)
Q Consensus        10 C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~   78 (230)
                      |..|++.|.+...|..|++. |.++.+        |.|+.|++.|.+...|..|+++|++.   ++|.|++  |++.|.+
T Consensus        28 C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE---KPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             CCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCC---CSEECSCTTTCCEESC
T ss_pred             cccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCC---CcccCCcCCCCCccCC
Confidence            66689999999999999998 655544        89999999999999999999999887   8999998  9999999


Q ss_pred             HHHHHHhHHHhcCCCceeccc--ccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         79 KSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        79 ~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      ...|..|+++|+++++|.|.+  |++.|.+...|..|++ .|.+++||.|.
T Consensus       105 ~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~~c~  154 (155)
T 2rpc_A          105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH-VHTSDKSGPSS  154 (155)
T ss_dssp             HHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSST-TTTSCCCSCSC
T ss_pred             HHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHH-HhcCCCCCCCC
Confidence            999999999999999999997  9999999999999999 99999999986

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=3.9e-20  Score=122.53  Aligned_cols=87  Identities=29%  Similarity=0.624  Sum_probs=71.1

Q ss_pred             CCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCC--CcccccccccccCChHHHHH
Q psy14799         64 LRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNI--RSFTCHLCNKGFFRKSYLKV  141 (230)
Q Consensus        64 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~--~~~~C~~C~~~f~~~~~l~~  141 (230)
                      .++|.|++|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|++ .|.++  ++|.|++|++.|.+.+.|..
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHH-HHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH-HhcCCCCCceECCCccchhCCHHHHHH
Confidence            4678888888888888888888888888888888888888888888888888 66665  78888888888888888888


Q ss_pred             HHHhhcCCCC
Q psy14799        142 HLLTIHMQPA  151 (230)
Q Consensus       142 H~~~~H~~~~  151 (230)
                      |++..|.++.
T Consensus        84 H~~~~H~~~~   93 (95)
T 2yt9_A           84 HIKQVHSGPS   93 (95)
T ss_dssp             HHHHTSCCCS
T ss_pred             HHHHhcCCCC
Confidence            8777886653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=5.4e-20  Score=124.40  Aligned_cols=88  Identities=35%  Similarity=0.702  Sum_probs=77.9

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHH
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      ++|.|++|++.|.+...|..|++.|+++++|.|.+|++.|.+...|..|++ .|.++++|.|++|++.|.+...|..| +
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H-~   93 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY-IHSKEKPFKCQECGKGFCQSRTLAVH-K   93 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGG-GSCCCCTTSCSSSCCCCSSHHHHHHH-H
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHH-HhCCCCCeECCCcCCcccCHHHHHHH-H
Confidence            678999999999999999999999998889999999999999999999988 88888899999999999999999999 6


Q ss_pred             hhcCCCChhh
Q psy14799        145 TIHMQPADEA  154 (230)
Q Consensus       145 ~~H~~~~~~~  154 (230)
                      ..|.++++|.
T Consensus        94 ~~H~~~~~~~  103 (106)
T 2ee8_A           94 TLHMQTSSPT  103 (106)
T ss_dssp             HHTTSCCCCC
T ss_pred             HHhCCCCCCc
Confidence            7787877765

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=1.3e-20  Score=127.71  Aligned_cols=87  Identities=18%  Similarity=0.352  Sum_probs=51.0

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHH
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      ++|.|++|++.|.+...|..|+++|.  ++|.|.+|++.|.+...|..|++  |.++++|.|++|++.|.+...|..|++
T Consensus        15 ~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~--H~~~~~~~C~~C~~~f~~~~~L~~H~~   90 (107)
T 1wjp_A           15 EVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES--KCEYKKLTCLECMRTFKSSFSIWRHQV   90 (107)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH--HCSTGGGEEGGGTEECSSHHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH--cCCCCCccCccccchhCCHHHHHHHHH
Confidence            45555555555555555555555552  45666666666666666666652  555566666666666666666666644


Q ss_pred             hhcCCCChhhh
Q psy14799        145 TIHMQPADEAQ  155 (230)
Q Consensus       145 ~~H~~~~~~~c  155 (230)
                      ..|.++++|.+
T Consensus        91 ~~H~~~~~~~~  101 (107)
T 1wjp_A           91 EVHNQNNMAPT  101 (107)
T ss_dssp             HTSCCCCCCCC
T ss_pred             HHcCCCCCCCC
Confidence            46666655554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=1.5e-20  Score=124.88  Aligned_cols=84  Identities=30%  Similarity=0.588  Sum_probs=56.5

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHH
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      ++|.|++|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|++ .|.++++|.|++|++.|.+.+.|..| +
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H-~   84 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDERPFKCQICPYASRNSSQLTVH-L   84 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHH-HSCCCCCEECSSSSCEESSHHHHHHH-H
T ss_pred             cCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHH-HhCCCCCccCCCCCCccCCHHHHHHH-H
Confidence            566777777777777777777766666666777777777777777777766 66666667777777777776677777 3


Q ss_pred             hhcCCC
Q psy14799        145 TIHMQP  150 (230)
Q Consensus       145 ~~H~~~  150 (230)
                      ..|.++
T Consensus        85 ~~h~~~   90 (96)
T 2dmd_A           85 RSHTGD   90 (96)
T ss_dssp             TTCCSC
T ss_pred             HHhcCC
Confidence            344433

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=8.3e-20  Score=121.19  Aligned_cols=90  Identities=22%  Similarity=0.530  Sum_probs=83.7

Q ss_pred             hcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHH
Q psy14799         30 VHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKAD  109 (230)
Q Consensus        30 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  109 (230)
                      ..++++|.|+.|++.|.+...|..|++.|++.   ++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   79 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGV---KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQ   79 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCC---CSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCC---CCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHH
Confidence            35688999999999999999999999998877   799999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCc
Q psy14799        110 LVRHMKGRHLNIRS  123 (230)
Q Consensus       110 l~~H~~~~H~~~~~  123 (230)
                      |..|++ .|.++++
T Consensus        80 l~~H~~-~h~~~~~   92 (96)
T 2dmd_A           80 LTVHLR-SHTGDSG   92 (96)
T ss_dssp             HHHHHT-TCCSCCC
T ss_pred             HHHHHH-HhcCCCC
Confidence            999999 7877654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.81  E-value=6e-20  Score=124.17  Aligned_cols=91  Identities=29%  Similarity=0.543  Sum_probs=82.6

Q ss_pred             CCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHH
Q psy14799         32 GDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLV  111 (230)
Q Consensus        32 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  111 (230)
                      ++++|.|..|++.|.+...|..|+++|++.   ++|.|++|++.|.+...|..|+++|+++++|.|.+|++.|.+...|.
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDE---RPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCS---CCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCC---CCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            467899999999999999999999988877   78999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCcccc
Q psy14799        112 RHMKGRHLNIRSFTC  126 (230)
Q Consensus       112 ~H~~~~H~~~~~~~C  126 (230)
                      .|++ .|.++++|..
T Consensus        91 ~H~~-~H~~~~~~~~  104 (106)
T 2ee8_A           91 VHKT-LHMQTSSPTA  104 (106)
T ss_dssp             HHHH-HTTSCCCCCC
T ss_pred             HHHH-HhCCCCCCcC
Confidence            9998 8988888764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=8.4e-20  Score=119.66  Aligned_cols=84  Identities=31%  Similarity=0.797  Sum_probs=62.4

Q ss_pred             Cccccc--ccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHH
Q psy14799         65 RPFPCD--LCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus        65 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  142 (230)
                      ++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++ .|.++++|.|++|++.|.+.+.|..|
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHH-HcCCCCCccCCCCCchhCCHHHHHHH
Confidence            567776  477777777777777777777777777777777777777777777 67777777777777777777777777


Q ss_pred             HHhhcCCC
Q psy14799        143 LLTIHMQP  150 (230)
Q Consensus       143 ~~~~H~~~  150 (230)
                       +..|.++
T Consensus        82 -~~~H~~~   88 (90)
T 1a1h_A           82 -TKIHLRQ   88 (90)
T ss_dssp             -HGGGGC-
T ss_pred             -HHHhccc
Confidence             4455544

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=8.6e-20  Score=119.62  Aligned_cols=87  Identities=32%  Similarity=0.726  Sum_probs=76.1

Q ss_pred             CCCccccc--ccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHH
Q psy14799         32 GDKSFQCD--ECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKAD  109 (230)
Q Consensus        32 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  109 (230)
                      +++||.|+  .|++.|.+...|..|+++|.+.   ++|.|+.|++.|.+...|..|+++|+++++|.|+.|++.|.+...
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   77 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQ---KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDE   77 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCC---CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCC---CCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHH
Confidence            46789998  5999999999999999988877   789999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCC
Q psy14799        110 LVRHMKGRHLNIR  122 (230)
Q Consensus       110 l~~H~~~~H~~~~  122 (230)
                      |..|++ .|.+++
T Consensus        78 l~~H~~-~H~~~k   89 (90)
T 1a1h_A           78 RKRHTK-IHLRQK   89 (90)
T ss_dssp             HHHHHG-GGGC--
T ss_pred             HHHHHH-HhcccC
Confidence            999998 787764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=6.5e-20  Score=124.30  Aligned_cols=96  Identities=20%  Similarity=0.366  Sum_probs=89.3

Q ss_pred             HHHhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceeccccccccc
Q psy14799         26 HITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFY  105 (230)
Q Consensus        26 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  105 (230)
                      ++++|.++++|.|+.|++.|.....|..|+++|.     ++|.|++|++.|.....|..|++ |+++++|.|.+|++.|.
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~-----~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~   80 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-----NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFK   80 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH-----HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECS
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC-----CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhC
Confidence            4567889999999999999999999999999873     58999999999999999999996 99999999999999999


Q ss_pred             CHHHHHHHHHhhcCCCCccccc
Q psy14799        106 SKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus       106 ~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      +...|..|++..|.++++|.+.
T Consensus        81 ~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           81 SSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             SHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999997699999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=2.6e-19  Score=118.56  Aligned_cols=88  Identities=30%  Similarity=0.634  Sum_probs=81.7

Q ss_pred             cCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCC--CceecccccccccCHH
Q psy14799         31 HGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGE--RDVTCGLCFQSFYSKA  108 (230)
Q Consensus        31 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~  108 (230)
                      .++++|.|+.|++.|.+...|..|+++|++.   ++|.|++|++.|.+...|..|+++|+++  ++|.|+.|++.|.+..
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~   79 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGE---KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPD   79 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSS---CSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCC---CCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHH
Confidence            4678999999999999999999999998877   7899999999999999999999999987  8999999999999999


Q ss_pred             HHHHHHHhhcCCC
Q psy14799        109 DLVRHMKGRHLNI  121 (230)
Q Consensus       109 ~l~~H~~~~H~~~  121 (230)
                      .|..|++..|.++
T Consensus        80 ~L~~H~~~~H~~~   92 (95)
T 2yt9_A           80 HLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHHTSCCC
T ss_pred             HHHHHHHHhcCCC
Confidence            9999997678765

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.79  E-value=1.2e-19  Score=116.79  Aligned_cols=78  Identities=29%  Similarity=0.603  Sum_probs=60.0

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHH
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      ||.|++|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++ .|.++++|.|++|++.|.+.+.|..|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHH-HHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHH-HhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            46777777777777777777777777777777777777777777777777 6777777788888888887777877743

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=2.6e-21  Score=132.88  Aligned_cols=95  Identities=15%  Similarity=0.208  Sum_probs=62.7

Q ss_pred             HHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHH--hcCCCcee-cccccccc--cCHHHHHHHHHhhcCCCCc
Q psy14799         49 QALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKT--HTGERDVT-CGLCFQSF--YSKADLVRHMKGRHLNIRS  123 (230)
Q Consensus        49 ~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~~H~~~~~  123 (230)
                      ..|..|+++|.+.   ++|.|++|++.|.+...|..|+++  |.+++++. |+.|++.|  .....|..|++ .|.+++|
T Consensus         5 ~~l~~H~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~-~H~~~~~   80 (115)
T 2dmi_A            5 SSGKLYGSIFTGA---SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG-KEDAQKV   80 (115)
T ss_dssp             CCCCCCCCCCCCC---CSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCC-SCCCCSS
T ss_pred             hhhhhheeeeCCC---CCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhh-ccCCCcc
Confidence            3455666666555   566677777777766667777666  55555443 77777666  66667777766 6777777


Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      |.|++|++.|.+.+.|.+|++..|
T Consensus        81 ~~C~~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           81 LKCMYCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHTT
T ss_pred             eECCCCCCccCCHHHHHHHHHHhC
Confidence            777777777777777777755544

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=1.2e-20  Score=129.52  Aligned_cols=103  Identities=19%  Similarity=0.244  Sum_probs=88.7

Q ss_pred             HHHHHHHHhhcCCCcccccccccccCChHHHHHhHhc--cCCCCCCCc-cccccccccc--CCHHHHHHhHHHhcCCCce
Q psy14799         21 LKLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQC--KHMDISLRP-FPCDLCEQRF--LNKSHLAYHVKTHTGERDV   95 (230)
Q Consensus        21 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~~~~-~~C~~C~~~f--~~~~~l~~H~~~h~~~~~~   95 (230)
                      ..|..|+++|++++||.|+.|++.|.+...|..|+++  +...   ++ +.|++|++.|  .....|..|+++|+++++|
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~---~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRD---DNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBC---SCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCcccc---CCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            4577899999999999999999999999999999998  4333   44 4599999999  8889999999999999999


Q ss_pred             ecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         96 TCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        96 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      .|++|++.|.+...|..|++ .|........+
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~-~hh~~~~~~~~  112 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMI-KTKHYQKVSGP  112 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHH-HTTTTTCSCCC
T ss_pred             ECCCCCCccCCHHHHHHHHH-HhCCcccCCCC
Confidence            99999999999999999999 55444444433

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.78  E-value=2.3e-19  Score=115.44  Aligned_cols=81  Identities=35%  Similarity=0.739  Sum_probs=58.1

Q ss_pred             cccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHH
Q psy14799         35 SFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHM  114 (230)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  114 (230)
                      ||.|+.|++.|.+...|..|+++|.+.   ++|.|+.|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDT---RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHS   77 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTC---CCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCC---CCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHH
Confidence            466777777777777777777766655   56777777777777777777777777777777777777777777777777


Q ss_pred             HhhcC
Q psy14799        115 KGRHL  119 (230)
Q Consensus       115 ~~~H~  119 (230)
                      + .|.
T Consensus        78 ~-~H~   81 (82)
T 2kmk_A           78 R-KHT   81 (82)
T ss_dssp             H-HHC
T ss_pred             H-hhC
Confidence            6 553

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.4e-18  Score=118.15  Aligned_cols=81  Identities=33%  Similarity=0.719  Sum_probs=73.1

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHH
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      ++|.| .|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+.+.|.+|++
T Consensus         9 k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~   86 (110)
T 2csh_A            9 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKRFMWRDSFHRHVT   86 (110)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT-TTCCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHH-HcCCCCCeeCCCCcchhcCHHHHHHHHH
Confidence            78999 899999999999999999999999999999999999999999988 8888899999999999999999999966


Q ss_pred             hhc
Q psy14799        145 TIH  147 (230)
Q Consensus       145 ~~H  147 (230)
                      ..|
T Consensus        87 ~~~   89 (110)
T 2csh_A           87 SCT   89 (110)
T ss_dssp             HHH
T ss_pred             Hcc
Confidence            665

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=8.8e-19  Score=119.20  Aligned_cols=84  Identities=32%  Similarity=0.668  Sum_probs=78.9

Q ss_pred             hhcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHH
Q psy14799         29 TVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKA  108 (230)
Q Consensus        29 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  108 (230)
                      .|+++++|.| .|++.|.+...|..|++.|++.   ++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+..
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   79 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGL---RPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRD   79 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCC---CSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCC---cCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHH
Confidence            5778999999 8999999999999999998877   78999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHh
Q psy14799        109 DLVRHMKG  116 (230)
Q Consensus       109 ~l~~H~~~  116 (230)
                      .|..|++.
T Consensus        80 ~l~~H~~~   87 (110)
T 2csh_A           80 SFHRHVTS   87 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999983

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.73  E-value=6.6e-19  Score=115.01  Aligned_cols=81  Identities=23%  Similarity=0.488  Sum_probs=73.5

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHH
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      +||.|++|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|++ .|.+ .+|.|+.|++.|.+...|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHH-HHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHH-HhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            689999999999999999999999999999999999999999999999998 5543 78999999999999999999988


Q ss_pred             hhc
Q psy14799        145 TIH  147 (230)
Q Consensus       145 ~~H  147 (230)
                      ..|
T Consensus        80 ~~h   82 (88)
T 1llm_C           80 RLK   82 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            887

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.72  E-value=2.9e-17  Score=109.56  Aligned_cols=81  Identities=36%  Similarity=0.741  Sum_probs=70.0

Q ss_pred             Ccccccc--cccccCCHHHHHHhHHHhcCCCceecc--cccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHH
Q psy14799         65 RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCG--LCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLK  140 (230)
Q Consensus        65 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  140 (230)
                      ++|.|.+  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++ .|.++++|.|++|++.|.+.+.|.
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHH-HHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHH-HhCCCCCeECCCCcCccCCHHHHH
Confidence            6788886  999999999999999989888889996  59999999999999988 888888899999999999999999


Q ss_pred             HHHHhhc
Q psy14799        141 VHLLTIH  147 (230)
Q Consensus       141 ~H~~~~H  147 (230)
                      .| +..|
T Consensus        93 ~H-~~~H   98 (100)
T 2ebt_A           93 LH-MKRH   98 (100)
T ss_dssp             HH-HHHH
T ss_pred             HH-HHHh
Confidence            99 4444

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.71  E-value=1.5e-17  Score=108.62  Aligned_cols=77  Identities=35%  Similarity=0.751  Sum_probs=53.7

Q ss_pred             Ccccccc--cccccCCHHHHHHhHHHhcCCCceecc--cccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHH
Q psy14799         65 RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCG--LCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLK  140 (230)
Q Consensus        65 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  140 (230)
                      .+|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++ .|.++++|.|++|++.|.+.+.|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHH-HHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHH-HcCCCCCccCCCCCcccCCHHHHH
Confidence            4566766  777777777777777777666777775  47777777777777766 666667777777777777777777


Q ss_pred             HH
Q psy14799        141 VH  142 (230)
Q Consensus       141 ~H  142 (230)
                      .|
T Consensus        83 ~H   84 (89)
T 2wbs_A           83 LH   84 (89)
T ss_dssp             HH
T ss_pred             HH
Confidence            77

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=2.6e-17  Score=107.43  Aligned_cols=82  Identities=30%  Similarity=0.648  Sum_probs=75.7

Q ss_pred             CCcccccc--cccccCChHHHHHhHhccCCCCCCCccccc--ccccccCCHHHHHHhHHHhcCCCceecccccccccCHH
Q psy14799         33 DKSFQCDE--CDMSFGTHQALGRHKQCKHMDISLRPFPCD--LCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKA  108 (230)
Q Consensus        33 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  108 (230)
                      ..+|.|+.  |++.|.+...|..|++.|.+.   ++|.|+  .|++.|.+...|..|+++|+++++|.|+.|++.|.+..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   79 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGE---KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSD   79 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSS---CCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCC---CCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHH
Confidence            46799999  999999999999999988776   789997  59999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhc
Q psy14799        109 DLVRHMKGRH  118 (230)
Q Consensus       109 ~l~~H~~~~H  118 (230)
                      .|..|++ .|
T Consensus        80 ~l~~H~~-~H   88 (89)
T 2wbs_A           80 HLALHMK-RH   88 (89)
T ss_dssp             HHHHHGG-GG
T ss_pred             HHHHHHH-hh
Confidence            9999988 65

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.70  E-value=4.8e-17  Score=108.50  Aligned_cols=84  Identities=31%  Similarity=0.654  Sum_probs=75.2

Q ss_pred             CCCcccccc--cccccCChHHHHHhHhccCCCCCCCccccc--ccccccCCHHHHHHhHHHhcCCCceecccccccccCH
Q psy14799         32 GDKSFQCDE--CDMSFGTHQALGRHKQCKHMDISLRPFPCD--LCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSK  107 (230)
Q Consensus        32 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  107 (230)
                      .+++|.|..  |++.|.+...|..|++.|.+.   ++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   88 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGE---KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRS   88 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCC---CCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCC---CCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCH
Confidence            356799986  999999999999999988777   789996  5999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcC
Q psy14799        108 ADLVRHMKGRHL  119 (230)
Q Consensus       108 ~~l~~H~~~~H~  119 (230)
                      ..|..|++ .|.
T Consensus        89 ~~l~~H~~-~H~   99 (100)
T 2ebt_A           89 DHLALHMK-RHQ   99 (100)
T ss_dssp             HHHHHHHH-HHC
T ss_pred             HHHHHHHH-HhC
Confidence            99999998 664

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.69  E-value=3.2e-18  Score=111.73  Aligned_cols=82  Identities=20%  Similarity=0.348  Sum_probs=53.8

Q ss_pred             CCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHH
Q psy14799         33 DKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVR  112 (230)
Q Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  112 (230)
                      ++||.|+.|++.|.+...|..|+++|.+.   ++|.|+.|++.|.+...|..|+++|++ .+|.|+.|++.|.+...|..
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~   76 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGE---KPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLEN   76 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCC---CCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCC---CCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHH
Confidence            35666666666666666666666666555   566666666666666666666666663 55666666666666666666


Q ss_pred             HHHhhc
Q psy14799        113 HMKGRH  118 (230)
Q Consensus       113 H~~~~H  118 (230)
                      |++..|
T Consensus        77 H~~~~h   82 (88)
T 1llm_C           77 EVARLK   82 (88)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666444

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.69  E-value=2.4e-17  Score=99.01  Aligned_cols=57  Identities=32%  Similarity=0.612  Sum_probs=30.1

Q ss_pred             CCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799         92 ERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus        92 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      |+||.|.+|++.|...+.|..|++ .|++++||.|++||+.|...+.|.+| +.+|+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~C~k~F~~~~~L~~H-~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRR-AHLGYRPRSCPECGKCFRDQSEVNRH-LKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHH-HHHTCCCEECTTTCCEESSHHHHHHH-GGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHH-HhCCCcCeECCCCCCCcCCHHHHHHH-hCccCCC
Confidence            445555555555555555555555 55555555555555555555555555 3445443

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.68  E-value=3.7e-17  Score=98.17  Aligned_cols=57  Identities=33%  Similarity=0.684  Sum_probs=45.0

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR  122 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (230)
                      +||.|.+||+.|.....|..|+++|++++||.|++|++.|...+.|..|++ .|++++
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~-~Htgep   59 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK-VHQNKP   59 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGG-GGSCC-
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhC-ccCCCC
Confidence            678888888888888888888888888888888888888888888888877 777653

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.68  E-value=5.8e-17  Score=104.71  Aligned_cols=77  Identities=23%  Similarity=0.396  Sum_probs=61.7

Q ss_pred             cccc--cccccccCCHHHHHHhHHHhcCCCceeccc--ccccccCHHHHHHHHHhhcCCCCcccccc---cccccCChHH
Q psy14799         66 PFPC--DLCEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCHL---CNKGFFRKSY  138 (230)
Q Consensus        66 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~---C~~~f~~~~~  138 (230)
                      ||.|  +.|++.|.+...|..|+++|.++++|.|+.  |++.|.+...|..|++ .|.+   |.|+.   |++.|.+.+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHH-HhCC---CCCCCCCCCCCccCCHHH
Confidence            4778  778888888888888888888888888877  8888888888888887 6665   88888   8888888888


Q ss_pred             HHHHHHhh
Q psy14799        139 LKVHLLTI  146 (230)
Q Consensus       139 l~~H~~~~  146 (230)
                      |..|++..
T Consensus        77 l~~H~~~h   84 (85)
T 2j7j_A           77 YLKHVAEC   84 (85)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhc
Confidence            88885443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.7e-16  Score=101.21  Aligned_cols=69  Identities=32%  Similarity=0.594  Sum_probs=49.6

Q ss_pred             Ccccccc--cccccCCHHHHHHhHH-HhcCCCceeccc--ccccccCHHHHHHHHHhhcCCCCcccccccccccC
Q psy14799         65 RPFPCDL--CEQRFLNKSHLAYHVK-THTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFF  134 (230)
Q Consensus        65 ~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~  134 (230)
                      ++|.|..  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+...|..|++ .|.+++||.|++|++.|.
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHH-HHHTSCCCSCCSSSCCCC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHH-HhCCCCCeeCCCCCCCCC
Confidence            5666665  7777777777777776 577777777776  7777777777777777 677777777777777663

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=4.3e-17  Score=105.65  Aligned_cols=80  Identities=25%  Similarity=0.397  Sum_probs=39.8

Q ss_pred             HHHHHhhcCCCcccccccccccCChHHHHHhHhccCCCC-CCCcccccccccccCCHHHHHHhHHHhcCCCceecccccc
Q psy14799         24 EAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDI-SLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQ  102 (230)
Q Consensus        24 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  102 (230)
                      .+|+++|+++++|.|..|++.|.....|..|++.++... ..++|.|++|++.|.....|..|+++|++++++.|..|+.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence            345555555555555555555555555555554444321 1134555555555555555555555555555555555444


Q ss_pred             c
Q psy14799        103 S  103 (230)
Q Consensus       103 ~  103 (230)
                      .
T Consensus        84 ~   84 (86)
T 1x6h_A           84 S   84 (86)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=3.2e-16  Score=99.89  Aligned_cols=72  Identities=32%  Similarity=0.550  Sum_probs=65.6

Q ss_pred             cCCCcccccc--cccccCChHHHHHhHh-ccCCCCCCCcccccc--cccccCCHHHHHHhHHHhcCCCceeccccccccc
Q psy14799         31 HGDKSFQCDE--CDMSFGTHQALGRHKQ-CKHMDISLRPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFY  105 (230)
Q Consensus        31 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  105 (230)
                      +++++|.|..  |++.|.+...|..|++ .|.+.   ++|.|++  |++.|.+...|..|+++|+++++|.|++|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~---~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ---KSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSC---CCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCC---CCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4678899987  9999999999999998 67666   7899999  9999999999999999999999999999999884

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.64  E-value=7.3e-17  Score=112.80  Aligned_cols=114  Identities=17%  Similarity=0.279  Sum_probs=86.7

Q ss_pred             HhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccC------CHHHHHHhHHHhcCCCceeccccc
Q psy14799         28 TTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFL------NKSHLAYHVKTHTGERDVTCGLCF  101 (230)
Q Consensus        28 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~  101 (230)
                      .++.+.++|.|...+.....  .+..+.+.+......+.+.|++|+..|.      ....|..|+ .|+++++|.|+.|+
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~   81 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCL   81 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTC
T ss_pred             hhcccccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCC
Confidence            35678899988776544321  2333433333333336788999887665      566677776 68889999999999


Q ss_pred             ccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhc
Q psy14799        102 QSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       102 ~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      +.|.....|..|++ .|  ++||.|++|++.|...+.|.+|++..|
T Consensus        82 k~f~~~~~l~~H~~-~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~  124 (129)
T 2wbt_A           82 MPFSSSVSLKQHIR-YT--EHTKVCPVCKKEFTSTDSALDHVCKKH  124 (129)
T ss_dssp             CEESSHHHHHHHHH-HT--CCCCBCTTTCCBCSSHHHHHHHHHHTT
T ss_pred             cccCCHhHHHHHHH-HC--CCCCCCCCCCcccCCHHHHHHHHHHHC
Confidence            99999999999999 78  789999999999999999999955544

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=3e-16  Score=101.62  Aligned_cols=79  Identities=18%  Similarity=0.377  Sum_probs=59.8

Q ss_pred             HHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCC----CceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         51 LGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGE----RDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        51 l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      |.+|+++|.+.   ++|.|++|++.|.....|..|++.++++    ++|.|..|++.|.+...|..|++ .|.+++++.|
T Consensus         3 ~~~H~~~H~~~---k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~~   78 (86)
T 1x6h_A            3 SGSSGRTHTGE---KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD-NCAGPDGVEG   78 (86)
T ss_dssp             TTCCSTTCCCC---CCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHH-HCCCCCSCCC
T ss_pred             cccccceecCC---CCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHH-HccCCCCccc
Confidence            45677777665   6788888888888888888887766654    57888888888888888888877 7777777888


Q ss_pred             ccccccc
Q psy14799        127 HLCNKGF  133 (230)
Q Consensus       127 ~~C~~~f  133 (230)
                      ..|+..|
T Consensus        79 ~~~~~~~   85 (86)
T 1x6h_A           79 ENSGPSS   85 (86)
T ss_dssp             CCCCCCC
T ss_pred             CCCCCCC
Confidence            8777654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.63  E-value=4.4e-16  Score=100.51  Aligned_cols=75  Identities=27%  Similarity=0.553  Sum_probs=52.0

Q ss_pred             cccc--cccccccCChHHHHHhHhccCCCCCCCcccccc--cccccCCHHHHHHhHHHhcCCCceeccc---ccccccCH
Q psy14799         35 SFQC--DECDMSFGTHQALGRHKQCKHMDISLRPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGL---CFQSFYSK  107 (230)
Q Consensus        35 ~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~  107 (230)
                      ||.|  +.|++.|.+...|..|+++|.+.   ++|.|++  |++.|.+...|..|+++|++   |.|..   |++.|.+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~   74 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQ---LPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTW   74 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTT---CCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCC---CCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCH
Confidence            4666  66777777777777777666655   5677766  77777777777777777666   67777   77777777


Q ss_pred             HHHHHHHH
Q psy14799        108 ADLVRHMK  115 (230)
Q Consensus       108 ~~l~~H~~  115 (230)
                      ..|..|++
T Consensus        75 ~~l~~H~~   82 (85)
T 2j7j_A           75 TLYLKHVA   82 (85)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            77777766

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=2.4e-16  Score=100.02  Aligned_cols=70  Identities=29%  Similarity=0.491  Sum_probs=53.1

Q ss_pred             HHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCC-CcccccccccccCChHHHHHHHHhhcCCCCh
Q psy14799         83 AYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNI-RSFTCHLCNKGFFRKSYLKVHLLTIHMQPAD  152 (230)
Q Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  152 (230)
                      ..|+++|+++++|.|++|++.|.+...|..|++..|.++ ++|.|++|++.|.+.+.|..|++..|..+.|
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            456777778888888888888888888888876456654 7788888888888888888887777766554

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.4e-15  Score=100.66  Aligned_cols=76  Identities=21%  Similarity=0.292  Sum_probs=60.4

Q ss_pred             ccCCHHHHHHhHHHhcCCCceecccccccc-cCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCCh
Q psy14799         75 RFLNKSHLAYHVKTHTGERDVTCGLCFQSF-YSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPAD  152 (230)
Q Consensus        75 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  152 (230)
                      .|.....|..|++.+.++++|.|+.|++.| .+...|..|++ .| ++++|.|.+|++.|...+.|..|++..|+++..
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~-~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHME-NC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHH-HH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHH-HH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            455666777888888888888888888888 88888888888 77 888888888888888888888886677765443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=3.7e-15  Score=95.94  Aligned_cols=61  Identities=25%  Similarity=0.438  Sum_probs=38.4

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      +.+.++|.|++|++.|.+...|.+|++ .|.+++||.|++|++.|...+.|.+|+++.|.++
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLR-LLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHH-TTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhh-hccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            344555666666666666666666666 5666666666666666666666666666666544

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=3.5e-15  Score=94.60  Aligned_cols=61  Identities=31%  Similarity=0.622  Sum_probs=30.6

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|++.|.....|..|++ .|.+++||.|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR-VHTGSGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG-GSCCCCCCCC
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH-HhCCCCCCCC
Confidence            445555555555555555555555554455555555555555555555544 4444444444

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.3e-15  Score=100.30  Aligned_cols=63  Identities=19%  Similarity=0.345  Sum_probs=31.3

Q ss_pred             CcccccccccccCCHHHHHHhHH-Hh---cCCCceecccccccccCHHHHHHH-HHhhcCCCCcccccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVK-TH---TGERDVTCGLCFQSFYSKADLVRH-MKGRHLNIRSFTCHL  128 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~H~~~~~~~C~~  128 (230)
                      +||.|+.|++.|.....|..|++ .|   .++++|.|..|++.|.....|..| ++ .|.+++||.|.+
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r-~Htgekpy~C~~   84 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLK-YHPGEENFKLTM   84 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHH-TSTTCCCEEEEE
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH-hcCCCCCeeCCc
Confidence            45555555555555555555544 24   334445555555555555555555 33 455555555544

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=3.9e-15  Score=94.39  Aligned_cols=66  Identities=26%  Similarity=0.527  Sum_probs=61.3

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCChhhh
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQ  155 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c  155 (230)
                      .+.++++|.|.+|++.|.+...|..|++ .|.++++|.|++|++.|.....|.+| +..|.+++||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGH-HRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCCSCSEECSSSCCEESSHHHHHHH-GGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHH-HcCCCcCeeCCCCCCccCCHHHHHHH-HHHhCCCCCCCC
Confidence            3567889999999999999999999999 89999999999999999999999999 678999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=4.9e-16  Score=103.35  Aligned_cols=76  Identities=20%  Similarity=0.346  Sum_probs=51.2

Q ss_pred             ccCHHHHHHHHHhhcCCCcccccccccccC-ChHHHHHhHhccCC-CCCCCcccccccccccCCHHHHHHhHHHhcCCCc
Q psy14799         17 FLMGLKLEAHITTVHGDKSFQCDECDMSFG-THQALGRHKQCKHM-DISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERD   94 (230)
Q Consensus        17 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   94 (230)
                      +.....+..|+++|.++++|.|+.|++.|. ....|..|+++|++ .   ++|.|.+|++.|.+...|..|+++|+++++
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~---~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQ---DALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHH---HHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCC---CCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            344445566777777777777777777777 77777777776665 4   567777777777777777777777766665


Q ss_pred             e
Q psy14799         95 V   95 (230)
Q Consensus        95 ~   95 (230)
                      .
T Consensus        83 ~   83 (98)
T 2gqj_A           83 S   83 (98)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=4.9e-15  Score=97.98  Aligned_cols=74  Identities=16%  Similarity=0.188  Sum_probs=45.0

Q ss_pred             ccCChHHHHHhHhccCCCCCCCccccccccccc-CCHHHHHHhHHHhcCCCceecccccccccCHHHHHHH-HHhhcCCC
Q psy14799         44 SFGTHQALGRHKQCKHMDISLRPFPCDLCEQRF-LNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRH-MKGRHLNI  121 (230)
Q Consensus        44 ~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~H~~~  121 (230)
                      +|.....|..|++.+.+.   ++|.|+.|++.| .+...|..|+++| ++++|.|.+|++.|.....|..| ++ .|+++
T Consensus        15 ~~~~~~~~~~~~~~~~~~---~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~-~H~~~   89 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDK---GSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMA-NHNSL   89 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHT---SCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHH-HTCCC
T ss_pred             CCCCchHHHHHHHHhcCC---CCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHH-hcCCC
Confidence            444555566666555544   566666666666 6666666666666 66666666666666666666666 44 56544


Q ss_pred             C
Q psy14799        122 R  122 (230)
Q Consensus       122 ~  122 (230)
                      .
T Consensus        90 p   90 (96)
T 2ctd_A           90 P   90 (96)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=5.6e-15  Score=98.41  Aligned_cols=67  Identities=21%  Similarity=0.198  Sum_probs=38.2

Q ss_pred             cCCCceecccccccccCHHHHHHHHHhhc---CCCCcccccccccccCChHHHHHHHHhhcCCCChhhhh
Q psy14799         90 TGERDVTCGLCFQSFYSKADLVRHMKGRH---LNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQN  156 (230)
Q Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H---~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~  156 (230)
                      .|+++|.|..|++.|.....|..|++..|   .+++||.|.+|++.|...+.|..|++..|.+++||.|.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            34555666666666666666666654235   34555666666666666666666644555556665554

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=2.2e-14  Score=90.11  Aligned_cols=58  Identities=34%  Similarity=0.695  Sum_probs=25.0

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRS  123 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  123 (230)
                      ++|.|..|++.|.+...|..|+++|+++++|.|..|++.|.....|..|++ .|.+++|
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp   73 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR-IHSGEKP   73 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHH-HHCCSCC
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHH-hcCCCCC
Confidence            334444444444444444444444444444444444444444444444444 3444333

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=1.4e-14  Score=91.08  Aligned_cols=64  Identities=27%  Similarity=0.512  Sum_probs=59.1

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCChh
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADE  153 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  153 (230)
                      .+.++++|.|..|++.|.+...|..|++ .|.++++|.|++|++.|...+.|.+| +..|.+++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H-~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTH-TRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHH-HHCCCCSEECTTTCCEESCHHHHHHH-HHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHH-HcCCCCCEECCCCCchhCCHHHHHHH-HHhcCCCCCC
Confidence            4567899999999999999999999999 89999999999999999999999999 6778888775

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=1.1e-15  Score=101.59  Aligned_cols=73  Identities=16%  Similarity=0.236  Sum_probs=55.2

Q ss_pred             HHHHHHhHHHhcCCCceeccccccccc-CHHHHHHHHHhhcCC-CCcccccccccccCChHHHHHHHHhhcCCCChh
Q psy14799         79 KSHLAYHVKTHTGERDVTCGLCFQSFY-SKADLVRHMKGRHLN-IRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADE  153 (230)
Q Consensus        79 ~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~H~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  153 (230)
                      ...+..|+++|.++++|.|.+|++.|. ....|..|++ .|.+ +++|.|.+|++.|.....|.+|+ ..|.+++|.
T Consensus         9 ~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~-~h~~~~~~~~C~~C~k~F~~~~~L~~H~-~~h~~~kp~   83 (98)
T 2gqj_A            9 GGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHME-VCQKLQDALKCQHCRKQFKSKAGLNYHT-MAEHSAKPS   83 (98)
T ss_dssp             CCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHH-HHHHHHHHHSCSSSCCCCSCHHHHHHHH-HHHSCSCSS
T ss_pred             CCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHH-HHcCCCCCEECCCCCCccCCHHHHHHHH-HHHcCCCCC
Confidence            344567788888888888888888888 8888888887 6666 77888888888888888888884 444455553

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.51  E-value=2.5e-14  Score=92.03  Aligned_cols=58  Identities=24%  Similarity=0.494  Sum_probs=52.5

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR  122 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (230)
                      ++|.|++|++.|.+...|..|+++|++++||.|.+|++.|.....|.+|++..|+++.
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            6799999999999999999999999999999999999999999999999876887764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.7e-14  Score=89.64  Aligned_cols=62  Identities=29%  Similarity=0.553  Sum_probs=33.0

Q ss_pred             hcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCc
Q psy14799         30 VHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERD   94 (230)
Q Consensus        30 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   94 (230)
                      +.++++|.|+.|++.|.....|..|+++|.+.   ++|.|++|++.|.....|..|+++|+++++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTD---RPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCS---CSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCC---CCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            34455555555555555555555555554444   455555555555555555555555555443

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.51  E-value=1.9e-14  Score=100.45  Aligned_cols=81  Identities=21%  Similarity=0.311  Sum_probs=61.2

Q ss_pred             CCcccccccccccC------ChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccC
Q psy14799         33 DKSFQCDECDMSFG------THQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYS  106 (230)
Q Consensus        33 ~~~~~C~~C~~~f~------~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  106 (230)
                      ++++.|+.|.+.|.      ....|..|+. |++.   +||.|++|++.|.....|..|+++|  +++|.|+.|++.|..
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~-h~~~---~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~  112 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLLA-SKAI---SQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTS  112 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHHH-HHHH---CSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSS
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHHH-hCCC---CCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCC
Confidence            45577777766655      5566666764 5554   7888888888888888888888887  778888888888888


Q ss_pred             HHHHHHHHHhhcCC
Q psy14799        107 KADLVRHMKGRHLN  120 (230)
Q Consensus       107 ~~~l~~H~~~~H~~  120 (230)
                      ...|..|++ .|.+
T Consensus       113 ~~~l~~H~~-~h~~  125 (129)
T 2wbt_A          113 TDSALDHVC-KKHN  125 (129)
T ss_dssp             HHHHHHHHH-HTTC
T ss_pred             HHHHHHHHH-HHCC
Confidence            888888888 5554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.7e-14  Score=90.14  Aligned_cols=61  Identities=28%  Similarity=0.599  Sum_probs=33.5

Q ss_pred             hhcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCC
Q psy14799         29 TVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        29 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      +|.++++|.|+.|++.|.....|..|+++|.+.   ++|.|++|++.|.....|..|+++|+++
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~---~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE---KPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS---CCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCC---CCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            445555555555555555555555555555444   4555555555555555555555555543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.2e-14  Score=92.04  Aligned_cols=69  Identities=23%  Similarity=0.508  Sum_probs=43.7

Q ss_pred             HHhHhccCCCCCCCcccccccccccCCHHHHHHhHH-HhcCC-CceecccccccccCHHHHHHHHHhhcCCCCc
Q psy14799         52 GRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVK-THTGE-RDVTCGLCFQSFYSKADLVRHMKGRHLNIRS  123 (230)
Q Consensus        52 ~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  123 (230)
                      .+|+++|.+.   ++|.|++|++.|.+...|..|++ .|.++ ++|.|++|++.|.+...|..|++..|..+.|
T Consensus         4 ~~H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            4 GSSGRTHSGE---KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCSCC---CSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CccccccCCC---CCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            4466655555   56666666666666666666665 45443 5677777777777777777777655555444

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.3e-14  Score=89.07  Aligned_cols=61  Identities=30%  Similarity=0.629  Sum_probs=48.6

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhc-CCCCcccccccccccCChHHHHHHHHhhc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRH-LNIRSFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H-~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      ++|.++++|.|+.|++.|.+...|..|++..| .+++||.|+.|++.|.+.+.|..|++..|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            35677888888888888888888888887337 57788888888888888888888866655

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.1e-14  Score=91.08  Aligned_cols=57  Identities=30%  Similarity=0.508  Sum_probs=42.6

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHH
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      ++|.++++|.|++|++.|.+...|..|++ .|.++++|.|++|++.|.+...|.+|++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~   63 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQR   63 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHH-GGGCSCCEECSSSCCEESSHHHHHHHHH
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHH-hcCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            45667777777777777777777777777 6777777777777777777777777743

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.6e-14  Score=91.68  Aligned_cols=65  Identities=23%  Similarity=0.421  Sum_probs=51.2

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCC---CCcccccccccccCChHHHHHHHHhhcCCCChhh
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLN---IRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEA  154 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~---~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~  154 (230)
                      |+++++|.|.+|++.|.+...|..|++ .|.+   +++|.|++|++.|...+.|.+|++..|.++.+..
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHH-HHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHH-HhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            667788888888888888888888887 6654   6788888888888888888888777887776654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.8e-14  Score=88.64  Aligned_cols=62  Identities=26%  Similarity=0.336  Sum_probs=43.3

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCCh
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPAD  152 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  152 (230)
                      |.++++|.|..|++.|.+...|..|++ .|.++++|.|++|++.|.+...|.+|++. |.+++|
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKK-FHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHG-GGCCSCSEECSSSSCEESSHHHHHHHHHH-HHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCEeCCCCCCccCCHHHHHHHHHH-HhCCCC
Confidence            456677777777777777777777777 67777777777777777777777777443 334433

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.48  E-value=3.5e-14  Score=84.38  Aligned_cols=53  Identities=25%  Similarity=0.484  Sum_probs=27.1

Q ss_pred             CCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHh
Q psy14799         92 ERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLT  145 (230)
Q Consensus        92 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  145 (230)
                      +++|.|+.|++.|.+...|..|++ .|.+++||.|++|++.|.+.+.|..|++.
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLR-THTGEKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHH-HHHCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCccCCCCcchhCChHHHHHHHH-HcCCCCCcCCCCCcchhCCHHHHHHHHHH
Confidence            344555555555555555555555 45555555555555555555555555433

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=7.3e-14  Score=83.93  Aligned_cols=56  Identities=32%  Similarity=0.691  Sum_probs=37.1

Q ss_pred             ceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799         94 DVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      +|.|+.|++.|.+...|..|++ .|.++++|.|+.|++.|.+.+.|..|++..|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHH-TTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHH-HhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            5666666666666666666666 5666666667667777766666666655566543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.45  E-value=6.6e-14  Score=83.18  Aligned_cols=51  Identities=29%  Similarity=0.559  Sum_probs=35.2

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHH
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      ++|.|++|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|++
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   53 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLE   53 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHH
Confidence            566777777777777777777777777777777777777777777777766

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.44  E-value=2e-13  Score=81.10  Aligned_cols=47  Identities=28%  Similarity=0.566  Sum_probs=20.6

Q ss_pred             eecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHH
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  142 (230)
                      |.|+.|++.|.+...|..|++ .|.++++|.|+.|++.|.+.+.|.+|
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H   48 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKH   48 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH-HTSSCCCEECSSSSCEESSHHHHHHH
T ss_pred             CcCCCCcCcCCCHHHHHHHHH-hcCCCCCccCCCCCchhcCHHHHHHH
Confidence            344444444444444444444 34444444444444444444444444

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=6.3e-14  Score=85.90  Aligned_cols=60  Identities=25%  Similarity=0.578  Sum_probs=34.1

Q ss_pred             hhcCCCcccccccccccCChHHHHHhHhccC--CCCCCCcccccccccccCCHHHHHHhHHHhcC
Q psy14799         29 TVHGDKSFQCDECDMSFGTHQALGRHKQCKH--MDISLRPFPCDLCEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        29 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~--~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   91 (230)
                      +|.+++||.|+.|++.|.+...|..|++.+|  +.   ++|.|+.|++.|.+...|..|++.+++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~---~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNV---KVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSC---CCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCC---cCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4555566666666666666666666665522  22   456666666666666666666555543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=2.1e-13  Score=81.89  Aligned_cols=56  Identities=34%  Similarity=0.745  Sum_probs=42.9

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCC
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNI  121 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (230)
                      ||.|+.|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|++..|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            67788888888888888888877777778888888888888888888864466654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.42  E-value=2.5e-13  Score=80.62  Aligned_cols=56  Identities=34%  Similarity=0.616  Sum_probs=52.7

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCC
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR  122 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (230)
                      ||.|+.|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|++ .|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK-SKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHH-SSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHH-HhcccC
Confidence            58999999999999999999999999999999999999999999999999 776654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.2e-16  Score=100.21  Aligned_cols=69  Identities=17%  Similarity=0.315  Sum_probs=44.2

Q ss_pred             HHHHHHHhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         22 KLEAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        22 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      .|..|+++|.++++|.|+.|++.|.....|..          .++|.|+.|++.|.....|..|+++|+++++|.|++|
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~----------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR----------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC----------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc----------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            35566666667777777777777766655554          1456666666666666666666666666666666655

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=4.2e-13  Score=85.06  Aligned_cols=61  Identities=18%  Similarity=0.404  Sum_probs=41.4

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcC---CCceecccccccccCHHHHHHHHHhhcCCCCccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTG---ERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFT  125 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~  125 (230)
                      ++|.|.+|++.|.....|..|+++|++   +++|.|.+|++.|.....|..|++..|.+.++..
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             cCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            567777777777777777777766664   6667777777777777777777754666665543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.35  E-value=4.1e-13  Score=88.34  Aligned_cols=60  Identities=28%  Similarity=0.402  Sum_probs=36.2

Q ss_pred             ccccccccccCCHHHHHHhHHH-hcCCCc--------eecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKT-HTGERD--------VTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      +.|+.|++.|.+...|..|+++ |.++++        |.|..|++.|.+...|..|++ .|.+++||.|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHH-HHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHH-hcCCCCCCCCC
Confidence            5566666666666666666665 555554        556666666666666666655 55555566554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.5e-15  Score=95.04  Aligned_cols=70  Identities=17%  Similarity=0.274  Sum_probs=42.0

Q ss_pred             HHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccc
Q psy14799         49 QALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHL  128 (230)
Q Consensus        49 ~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  128 (230)
                      ..|..|+++|.+.   ++|.|++|++.|.+...|..       +++|.|+.|++.|.+...|..|++ .|.++++|.|++
T Consensus         4 ~~l~~H~~~h~~~---~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~-~H~~~~~~~C~~   72 (73)
T 2ctu_A            4 GSSGKRQKIHLGD---RSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEG-NESGKKTSGPSS   72 (73)
T ss_dssp             CSCCCCCCCCCCC---SEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSS-CCCCCCCSSCCC
T ss_pred             hhHHHHHHHhCCC---CCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHH-hhcCCCCCCCCC
Confidence            3455566655554   56666666666666555543       455666666666666666666665 566666666665


Q ss_pred             c
Q psy14799        129 C  129 (230)
Q Consensus       129 C  129 (230)
                      |
T Consensus        73 C   73 (73)
T 2ctu_A           73 G   73 (73)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=2.3e-12  Score=80.48  Aligned_cols=51  Identities=31%  Similarity=0.881  Sum_probs=25.8

Q ss_pred             Cccccc--ccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHH
Q psy14799         65 RPFPCD--LCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        65 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      ++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHT
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            445554  255555555555555555555555555555555555555555544

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=2.7e-12  Score=84.40  Aligned_cols=62  Identities=26%  Similarity=0.324  Sum_probs=54.0

Q ss_pred             CcccccccccccCChHHHHHhHhc-cCCCCCCCc--------ccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         34 KSFQCDECDMSFGTHQALGRHKQC-KHMDISLRP--------FPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ..|.|+.|++.|.+...|.+|+++ |.+.   ++        |.|++|++.|.+...|..|+++|+++++|.|+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~---~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGG---PEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCC---TTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCC---CCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            347799999999999999999987 5544   34        89999999999999999999999999999986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=2.2e-12  Score=80.54  Aligned_cols=64  Identities=25%  Similarity=0.559  Sum_probs=55.1

Q ss_pred             HHHhHH-HhcCCCceecc--cccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhc
Q psy14799         82 LAYHVK-THTGERDVTCG--LCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus        82 l~~H~~-~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      +..|+. ++.++++|.|+  .|++.|.+...|..|++ .|.++++|.|++|++.|.+.+.|.+| ...|
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~H   72 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTH-IRTH   72 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHH-HTTC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHH-hhCCCCCeECCCCCchhCCHHHHHHH-HHhc
Confidence            444433 57788999997  59999999999999999 89999999999999999999999999 5555

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=6.5e-12  Score=76.85  Aligned_cols=54  Identities=22%  Similarity=0.388  Sum_probs=34.8

Q ss_pred             CCCceecccccccccCHHHHHHHHHhhcCCCCccccc-ccccccCChHHHHHHHHhhcC
Q psy14799         91 GERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH-LCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus        91 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~-~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      ++++|.|..|++.|. ...|..|++ . .+++||.|+ .|++.|...+.|..| +..|.
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~-~-~~~~p~~C~~~C~k~f~~~~~L~~H-~~~hc   61 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQY-Q-CPRLPVACPNQCGVGTVAREDLPGH-LKDSC   61 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHH-H-CSSSEEECTTCCSCCEEETTTHHHH-HHTTS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHH-H-cCCcCccCCcccCcccccHHHHHHH-HHhhc
Confidence            455666666666666 666666666 4 666666666 666666666666666 44443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.8e-12  Score=71.16  Aligned_cols=44  Identities=23%  Similarity=0.252  Sum_probs=21.9

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.+...|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHER-LHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHH-HCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHH-hcCCCCCCCCCCC
Confidence            3444444555555555555555555555544 4555555555444

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.4e-12  Score=71.31  Aligned_cols=44  Identities=23%  Similarity=0.286  Sum_probs=26.9

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|...+.|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHT-TTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHh-hcCCCCCCCCCCC
Confidence            4455566666666666666666666666665 5666666666655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.7e-12  Score=71.22  Aligned_cols=44  Identities=20%  Similarity=0.312  Sum_probs=24.9

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|++|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQR-IHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHG-GGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHH-HhcCCCCCCCCCC
Confidence            4445555555555555555555555555555 5555555555554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.9e-12  Score=71.14  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=25.0

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|++|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQR-IHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHG-GGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            4445555555555555555555555555555 5555555555554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.6e-12  Score=71.21  Aligned_cols=44  Identities=27%  Similarity=0.366  Sum_probs=21.5

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.+...|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHH-HHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            3344444455555555555555555555544 4444455555444

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.6e-12  Score=70.66  Aligned_cols=44  Identities=25%  Similarity=0.361  Sum_probs=26.6

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|++|++.|.+...|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHG-GGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            4455556666666666666666666666665 5666666666555

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=5.1e-12  Score=70.70  Aligned_cols=42  Identities=24%  Similarity=0.365  Sum_probs=20.4

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      ++|+++++|.|+.|++.|.+...|..|++ .|.+++||.|++|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THAEEKPSGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHH-HHTSSCSCSCCCC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            34444444555555555555555555544 4444444544443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.8e-12  Score=71.17  Aligned_cols=44  Identities=20%  Similarity=0.269  Sum_probs=24.2

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGG-GTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhh-hcCCCCCCCCCCC
Confidence            4445555555555555555555555555555 5555555555554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.5e-12  Score=70.71  Aligned_cols=44  Identities=25%  Similarity=0.332  Sum_probs=24.4

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQ-IHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHH-TTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            4445555555555555555555555555555 5555555555544

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.5e-12  Score=70.48  Aligned_cols=44  Identities=23%  Similarity=0.366  Sum_probs=23.5

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.+...|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQK-IHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHH-HTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            4444555555555555555555555555555 5555555555544

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.1e-11  Score=75.79  Aligned_cols=55  Identities=25%  Similarity=0.457  Sum_probs=39.3

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc-cccccccCHHHHHHHHHhhcCCCC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG-LCFQSFYSKADLVRHMKGRHLNIR  122 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~H~~~~  122 (230)
                      ++|.|+.|++.|. ...|..|+++ +++++|.|+ .|++.|.....|..|++ .|...+
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~-~hc~~~   64 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLK-DSCNTA   64 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHH-TTSSSC
T ss_pred             CCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHH-hhcccC
Confidence            5677777777777 7777777777 777777777 77777777777777776 554443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6e-12  Score=71.15  Aligned_cols=44  Identities=23%  Similarity=0.268  Sum_probs=25.9

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQK-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGG-GTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            4455555566666666666666666666655 5555566666554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.2e-12  Score=70.80  Aligned_cols=43  Identities=26%  Similarity=0.372  Sum_probs=20.3

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      +++|+++++|.|++|++.|.....|..|++ .|.+++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2eoq_A            4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSM-VHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSCCCSSSCCCCSSHHHHHHHHH-HTTCCCSSSCCCC
T ss_pred             CCCCCCCCCcCCCcCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            334444444444444444444444444444 4444444444443

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.18  E-value=6.5e-12  Score=71.00  Aligned_cols=42  Identities=21%  Similarity=0.359  Sum_probs=18.3

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      ++|+++++|.|++|++.|.....|..|++ .|.+++||.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2emk_A            5 SSGTGEKPYECKECGKAFSQTTHLIQHQR-VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCSCBCSSSCCBCSCHHHHHHHHH-HHSSCCCSSCCCC
T ss_pred             CccCCCCceECCCCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            33444444444444444444444444444 4444444444433

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.3e-12  Score=70.76  Aligned_cols=44  Identities=20%  Similarity=0.237  Sum_probs=25.8

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|.++++|.|+.|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHT-TTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            4445555566666666666666666666655 5555566666554

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.8e-12  Score=70.88  Aligned_cols=44  Identities=23%  Similarity=0.269  Sum_probs=25.8

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQL-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHT-TTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            4445555566666666666666666666655 5555566666554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.18  E-value=6.1e-12  Score=71.09  Aligned_cols=44  Identities=20%  Similarity=0.357  Sum_probs=25.4

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|...+.|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR-SHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGG-GSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            4445555555666666666666556666655 5555555555554

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=6.4e-12  Score=71.02  Aligned_cols=44  Identities=16%  Similarity=0.197  Sum_probs=25.7

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|++|++.|.+...|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHT-TTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            4455555556666666666666666666655 5555556666554

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.1e-12  Score=70.80  Aligned_cols=42  Identities=31%  Similarity=0.309  Sum_probs=18.3

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      ++|+++++|.|++|++.|.+...|..|++ .|.+++||.|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQK-CHTGERHSGPSSG   46 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHHH-HHSCCSSCCSCCC
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            33444444444444444444444444444 4444444444433

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.18  E-value=6.2e-12  Score=71.07  Aligned_cols=44  Identities=18%  Similarity=0.212  Sum_probs=24.2

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQN-VHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGG-GGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHH-HcCCCCCcCCCCC
Confidence            4445555555555555555555555555555 4555555555554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.5e-12  Score=70.70  Aligned_cols=44  Identities=23%  Similarity=0.261  Sum_probs=25.0

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQR-IHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHT-TTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            4445555555555555555555555555555 5555555555554

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.5e-12  Score=70.51  Aligned_cols=44  Identities=25%  Similarity=0.342  Sum_probs=26.1

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|++|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMR-THSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHT-TTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHH-HhCCCCCCCCCCC
Confidence            4445555666666666666666666666655 5556666666554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.18  E-value=7.2e-12  Score=70.79  Aligned_cols=44  Identities=23%  Similarity=0.296  Sum_probs=24.3

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQK-IHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHT-GGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            4445555555555555555555555555555 5555555555544

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.2e-12  Score=70.55  Aligned_cols=44  Identities=18%  Similarity=0.274  Sum_probs=25.4

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|++|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQR-VHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGG-GGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            4455555555566556666655555655555 5555555555554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.4e-12  Score=70.71  Aligned_cols=44  Identities=23%  Similarity=0.332  Sum_probs=23.8

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|++|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHT-TTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            4444555555555555555555555555555 5555555555544

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.7e-12  Score=70.92  Aligned_cols=43  Identities=23%  Similarity=0.309  Sum_probs=19.5

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      +++|.++++|.|++|++.|.....|..|++ .|.+++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2emy_A            4 GSSGTGENPYECHECGKAFSRKYQLISHQR-THAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHH-HHTTSCCSCSSCC
T ss_pred             CCCCCCCcCcCCCCCCcccCcHHHHHHHHH-HcCCCCCCCCCCC
Confidence            334444444444444444444444444444 4444444444443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.9e-12  Score=70.88  Aligned_cols=44  Identities=18%  Similarity=0.280  Sum_probs=21.0

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHH-HHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHH-HHCCCCCCCCCCC
Confidence            3344444444444444444444444444444 4444444444443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.5e-12  Score=70.70  Aligned_cols=44  Identities=20%  Similarity=0.294  Sum_probs=20.9

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|++|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRR-IHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHH-HHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHH-HcCCCCCCCCCCC
Confidence            3344444444444444444444444444444 4444444444443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=7.7e-12  Score=70.65  Aligned_cols=44  Identities=20%  Similarity=0.276  Sum_probs=25.5

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQR-VHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHT-TTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            4445555555666666666666666666655 5555556665554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=2.4e-11  Score=71.19  Aligned_cols=45  Identities=22%  Similarity=0.354  Sum_probs=23.8

Q ss_pred             cCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccC
Q psy14799         90 TGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFF  134 (230)
Q Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~  134 (230)
                      .++++|.|++|++.|.....|..|++..|.+++||.|++|++.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            344555555555555555555555433455555555555555554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.1e-12  Score=71.08  Aligned_cols=43  Identities=19%  Similarity=0.195  Sum_probs=19.3

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      +++|+++++|.|++|++.|.....|..|++ .|.+++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2emp_A            4 GSSGTGVKPYMCNECGKAFSVYSSLTTHQV-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESCHHHHHHHHH-HHHCCSCCSCCCC
T ss_pred             ccccCCCcCeECCCCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            334444444444444444444444444444 4444444444443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.17  E-value=7.5e-12  Score=70.69  Aligned_cols=44  Identities=23%  Similarity=0.270  Sum_probs=25.1

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.+...|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQR-VHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGG-GGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHH-HhCCCCCCCCCCC
Confidence            4445555555555555555555555555555 5555555555554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=7.7e-12  Score=70.66  Aligned_cols=44  Identities=23%  Similarity=0.289  Sum_probs=24.9

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHM-VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGG-GGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            4445555555555555555555555555555 5555555555554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1e-11  Score=70.17  Aligned_cols=44  Identities=18%  Similarity=0.334  Sum_probs=23.9

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|.++++|.|++|++.|.+...|..|++ .|.+++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQR-SHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHH-HSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHH-HhCCCCCCCCCCC
Confidence            3444555555555555555555555555555 5555555555544

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.6e-12  Score=70.70  Aligned_cols=44  Identities=14%  Similarity=0.200  Sum_probs=24.6

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR-VHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGG-GGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            3445555555555555555555555555555 5555555555554

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.6e-12  Score=70.70  Aligned_cols=44  Identities=27%  Similarity=0.289  Sum_probs=26.0

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.+...|..|++ .|.+++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK-VHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHT-TSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHH-hhCCCCCCCCCCC
Confidence            4445555566666666666666666666655 5556666666554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.3e-12  Score=71.04  Aligned_cols=43  Identities=26%  Similarity=0.423  Sum_probs=19.7

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      +++|+++++|.|..|++.|.+...|..|++ .|.+++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~c   46 (46)
T 2emh_A            4 GSSGTGERPYICTVCGKAFTDRSNLIKHQK-IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSCCCSEECTTTCCEESSHHHHHHHHH-HHHCSSCSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCchhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            334444444444444444444444444444 4444444444443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.6e-12  Score=70.96  Aligned_cols=43  Identities=28%  Similarity=0.439  Sum_probs=18.7

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      +++|+++++|.|+.|++.|.+.+.|..|++ .|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2eoo_A            4 GSSGSGERPYGCNECGKNFGRHSHLIEHLK-RHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCEECSSSCCEESSHHHHHHHHH-HHHSTTSSCCSCC
T ss_pred             CCCCCCCCCEEccccCcccCCHHHHHHHHH-HHcCCCCCCCCCC
Confidence            333444444444444444444444444444 3444444444433

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.16  E-value=6.1e-12  Score=71.12  Aligned_cols=42  Identities=24%  Similarity=0.294  Sum_probs=18.6

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      ++|+++++|.|++|++.|.+...|..|++ .|.+++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ely_A            5 SSGTGEKPFKCVECGKGFSRRSALNVHHK-LHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSTTHHHHHHH-HHSCCSSCSCCCC
T ss_pred             CCCCCCCCcccCccCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            34444444444444444444444444444 4444444444443

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1e-11  Score=70.10  Aligned_cols=43  Identities=16%  Similarity=0.274  Sum_probs=20.1

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      +++|.++++|.|+.|++.|.....|..|++ .|.+++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQV-LHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHHH-HHSCCSCCCTTCC
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            334444444444444444444444444444 4444444444443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.2e-12  Score=70.52  Aligned_cols=44  Identities=23%  Similarity=0.355  Sum_probs=20.9

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-THVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHH-HCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            3344444444444444444444444444444 4444444444443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.15  E-value=1.3e-11  Score=69.67  Aligned_cols=44  Identities=20%  Similarity=0.254  Sum_probs=25.6

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|.++++|.|++|++.|.+...|..|++ .|.+++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-MHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHG-GGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            3445555556666666666666666666655 5555566666554

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.2e-12  Score=70.33  Aligned_cols=43  Identities=21%  Similarity=0.286  Sum_probs=20.3

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      +++|+++++|.|++|++.|.....|..|++ .|.+++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2en6_A            4 GSSGSGEKPYGCNECGKTFSQKSILSAHQR-THTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCEEETTTTEEESSHHHHHHHHH-HHSSCCCSSSCCC
T ss_pred             CCccCCCcCeECCCCCcccCchHHHHHHHH-HcCCCCCCCCCCC
Confidence            334444444444444444444444444444 4444444444443

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.15  E-value=2.2e-11  Score=68.76  Aligned_cols=45  Identities=24%  Similarity=0.490  Sum_probs=30.3

Q ss_pred             HhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         53 RHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        53 ~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      +|+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~---k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGE---KPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSS---CSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCC---CceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355555554   667777777777777777777777777777777665

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.5e-11  Score=68.45  Aligned_cols=45  Identities=31%  Similarity=0.477  Sum_probs=31.0

Q ss_pred             HhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         53 RHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        53 ~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      +|+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGE---KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSC---CSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCC---CCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            355555554   667777777777777777777777777777777665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.3e-11  Score=68.66  Aligned_cols=44  Identities=18%  Similarity=0.331  Sum_probs=27.7

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGE---KLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCC---CCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCC---CCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            45555444   566666666666666666666666666666666655

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.4e-11  Score=69.58  Aligned_cols=43  Identities=23%  Similarity=0.356  Sum_probs=23.5

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHL  128 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  128 (230)
                      |+++|+++++|.|+.|++.|.....|..|++ .|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQK-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHT-TTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            4445555555555555555555555555555 555555555554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9e-12  Score=70.42  Aligned_cols=41  Identities=22%  Similarity=0.297  Sum_probs=17.5

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      +|.++++|.|+.|++.|.+...|..|++ .|.+++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2ytm_A            6 SGTGEKPYKCMECGKAFGDNSSCTQHQR-LHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSCCSSSBTTTTBCCSSHHHHHHHHH-HHHSCCCCCCCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            3444444444444444444444444444 3444444444433

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.2e-11  Score=68.71  Aligned_cols=44  Identities=27%  Similarity=0.523  Sum_probs=29.5

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGE---RPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCC---CSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCC---CCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55555554   667777777777777777777777777777777665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.1e-11  Score=68.79  Aligned_cols=45  Identities=24%  Similarity=0.341  Sum_probs=32.0

Q ss_pred             HhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         53 RHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        53 ~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      +|+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGV---KPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCC---CSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCC---cCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355655555   677777777777777777777777777777777765

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.3e-11  Score=68.65  Aligned_cols=45  Identities=24%  Similarity=0.434  Sum_probs=31.5

Q ss_pred             HhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         53 RHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        53 ~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      +|+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~---k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGE---NPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSS---CCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCC---cCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            355555554   677777777777777777777777777777777765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.7e-11  Score=68.38  Aligned_cols=44  Identities=27%  Similarity=0.509  Sum_probs=28.8

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGE---KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSS---CSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCC---CCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55555444   566777777777777777777666766666766665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3.1e-11  Score=67.40  Aligned_cols=44  Identities=30%  Similarity=0.455  Sum_probs=28.3

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus         1 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGE---KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSC---CCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCC---cCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444   566777777777777677777666766666766655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.2e-11  Score=68.77  Aligned_cols=44  Identities=18%  Similarity=0.492  Sum_probs=24.9

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGE---KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSC---CSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCC---CCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            44444444   555666666666666666666556655556655554

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=6.1e-12  Score=71.08  Aligned_cols=42  Identities=24%  Similarity=0.347  Sum_probs=18.4

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      ++|+++++|.|+.|++.|.....|..|++ .|.+++||.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRR-VHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHTH-HHHSCCCSCSCCC
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHHH-hcCCCCCCCCCCC
Confidence            33444444444444444444444444444 4444444444433

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.9e-11  Score=68.25  Aligned_cols=44  Identities=25%  Similarity=0.460  Sum_probs=30.4

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGE---KPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCC---CSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCC---cCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            55555554   667777777777777777777777777777777665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.3e-11  Score=68.63  Aligned_cols=44  Identities=27%  Similarity=0.501  Sum_probs=24.7

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~---~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGE---KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCC---CSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCC---CCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444443   555566666666666566666555655556655554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.8e-11  Score=68.30  Aligned_cols=44  Identities=27%  Similarity=0.521  Sum_probs=29.8

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGE---KPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSS---CSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCC---CCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            55555554   667777777777777777777777777777777665

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.3e-11  Score=69.79  Aligned_cols=42  Identities=19%  Similarity=0.246  Sum_probs=18.9

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      ++|.++++|.|+.|++.|.....|..|++ .|.+++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQR-VHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHH-HHHCCCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHH-HHcCCCCCCCCCC
Confidence            33444444444444444444444444444 4444444444443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.1e-11  Score=68.80  Aligned_cols=36  Identities=36%  Similarity=0.648  Sum_probs=18.1

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             cCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            445555555555555555555555555555555443

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.2e-11  Score=68.05  Aligned_cols=44  Identities=23%  Similarity=0.372  Sum_probs=26.9

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGE---KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSC---CSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCC---cCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555444   566666666666666666666666666666666554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.5e-11  Score=68.55  Aligned_cols=45  Identities=27%  Similarity=0.442  Sum_probs=31.0

Q ss_pred             HhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         53 RHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        53 ~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      +|+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~---k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGE---RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCC---CCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCC---CCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            355555554   667777777777777777777777777777777665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=6.5e-12  Score=70.98  Aligned_cols=44  Identities=23%  Similarity=0.375  Sum_probs=21.0

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |+++|+++++|.|++|++.|.....|..|++ .|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQR-VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGG-GGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            3344444444444444444444444444444 4444444444444

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.5e-11  Score=68.52  Aligned_cols=45  Identities=29%  Similarity=0.521  Sum_probs=31.1

Q ss_pred             HhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         53 RHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        53 ~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      +|+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~---k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGE---RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCC---CSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCC---CCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            355555554   667777777777777777777777777777777665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.9e-11  Score=68.23  Aligned_cols=44  Identities=27%  Similarity=0.538  Sum_probs=25.6

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGE---KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCC---CSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCC---cCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44444444   556666666666666666666666666666666554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.7e-11  Score=68.34  Aligned_cols=36  Identities=31%  Similarity=0.587  Sum_probs=19.7

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           11 KPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455555555555555555555555555555555544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.11  E-value=2.2e-11  Score=68.71  Aligned_cols=36  Identities=25%  Similarity=0.468  Sum_probs=17.5

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A           11 KTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            444444444444444444444444444444444443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.6e-11  Score=69.39  Aligned_cols=36  Identities=36%  Similarity=0.587  Sum_probs=17.7

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A           11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444555555555555555555445544445554443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.3e-11  Score=68.92  Aligned_cols=22  Identities=27%  Similarity=0.626  Sum_probs=7.9

Q ss_pred             CCceecccccccccCHHHHHHH
Q psy14799         92 ERDVTCGLCFQSFYSKADLVRH  113 (230)
Q Consensus        92 ~~~~~C~~C~~~f~~~~~l~~H  113 (230)
                      +++|.|++|++.|.....|..|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H   31 (47)
T 2epx_A           10 KKPYECIECGKAFIQNTSLIRH   31 (47)
T ss_dssp             CCSBCCSSSCCCBSSHHHHHHH
T ss_pred             CCCEECCccCchhCChHHHHHH
Confidence            3333333333333333333333

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.11  E-value=2.6e-11  Score=68.43  Aligned_cols=44  Identities=25%  Similarity=0.425  Sum_probs=24.7

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGE---KRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTS---CCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCC---cCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44444443   555666666666666566666555655556655554

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=2.2e-11  Score=68.75  Aligned_cols=44  Identities=27%  Similarity=0.409  Sum_probs=23.7

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSST---KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCS---CSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCC---CCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44444443   455555555555555555555555555555555544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.11  E-value=9.2e-11  Score=72.84  Aligned_cols=51  Identities=35%  Similarity=0.768  Sum_probs=27.6

Q ss_pred             Ccccccc--cccccCCHHHHHHhHHHhcCCCceeccc--ccccccCHHHHHHHHH
Q psy14799         65 RPFPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMK  115 (230)
Q Consensus        65 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~  115 (230)
                      ++|.|..  |++.|.....|..|+++|+++++|.|.+  |++.|.....|..|++
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            4455555  5555555555555555555555555543  5555555555555544

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.11  E-value=2.1e-11  Score=68.82  Aligned_cols=36  Identities=31%  Similarity=0.580  Sum_probs=18.3

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A           11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555555555555555555555555555555443

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.7e-11  Score=68.35  Aligned_cols=36  Identities=31%  Similarity=0.503  Sum_probs=19.0

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A           11 KPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455555555555555555555555555555555544

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.1e-11  Score=68.88  Aligned_cols=43  Identities=12%  Similarity=0.294  Sum_probs=20.8

Q ss_pred             HHhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCccccccc
Q psy14799         27 ITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLC   72 (230)
Q Consensus        27 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C   72 (230)
                      +++|++++||.|+.|++.|.....|..|+++|.+.   ++|.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---~~~~C~~C   46 (46)
T 2elz_A            4 GSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGE---KTSGPSSG   46 (46)
T ss_dssp             CSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSC---CCCCSCCC
T ss_pred             CCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCC---CCCCCCCC
Confidence            34444455555555555555555555555544443   44444443

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.8e-11  Score=68.26  Aligned_cols=36  Identities=33%  Similarity=0.637  Sum_probs=19.2

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           11 KPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455555555555555555555555555555555544

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.5e-11  Score=68.48  Aligned_cols=36  Identities=31%  Similarity=0.597  Sum_probs=20.0

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A           11 KPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            455555555555555555555555555555555544

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.5e-11  Score=68.51  Aligned_cols=36  Identities=36%  Similarity=0.615  Sum_probs=19.4

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A           11 KPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455555555555555555555555555555555544

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.8e-11  Score=67.72  Aligned_cols=44  Identities=30%  Similarity=0.507  Sum_probs=29.5

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 h~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGE---KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSS---CCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCC---cCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            45555554   667777777777777777777777777777777665

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.7e-11  Score=68.41  Aligned_cols=42  Identities=19%  Similarity=0.337  Sum_probs=19.2

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHL  128 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  128 (230)
                      +++|+++++|.|..|++.|.....|..|++ .|.+++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2em2_A            4 GSSGSGEKPFKCKECGKAFRQNIHLASHLR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHHH-HHCCCCSSCSSC
T ss_pred             CCCCCCCCCEECCcCCchhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            334444444444444444444444444444 444444444443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.8e-11  Score=68.26  Aligned_cols=44  Identities=23%  Similarity=0.382  Sum_probs=26.5

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGE---KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCC---CSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCC---CCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44544444   556666666666666666666666666666666554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=5.6e-11  Score=69.57  Aligned_cols=40  Identities=23%  Similarity=0.414  Sum_probs=36.3

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCCCChhhhh
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQN  156 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~  156 (230)
                      .|.+++||.|++|++.|.....|.+|++..|.+++||.|.
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~   45 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   45 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCC
Confidence            4678899999999999999999999966699999999875

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.8e-11  Score=68.27  Aligned_cols=44  Identities=23%  Similarity=0.345  Sum_probs=23.7

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGE---KSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCC---SSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCC---CCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44444443   455555555555555555555555555555555544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.10  E-value=1e-10  Score=72.66  Aligned_cols=54  Identities=24%  Similarity=0.574  Sum_probs=49.5

Q ss_pred             hcCCCceeccc--ccccccCHHHHHHHHHhhcCCCCcccccc--cccccCChHHHHHHH
Q psy14799         89 HTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCHL--CNKGFFRKSYLKVHL  143 (230)
Q Consensus        89 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~  143 (230)
                      ....++|.|..  |++.|.....|..|++ .|.++++|.|++  |++.|.....|.+|+
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~f~~~~~l~~H~   69 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHR   69 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHH-HHSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHH-hcCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence            34568899998  9999999999999999 899999999975  999999999999994

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.3e-11  Score=68.01  Aligned_cols=36  Identities=36%  Similarity=0.703  Sum_probs=18.7

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A           11 KPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            445555555555555555555555555555555444

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5e-11  Score=67.27  Aligned_cols=44  Identities=23%  Similarity=0.393  Sum_probs=29.1

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus         3 h~~~h~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGE---KPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSC---CSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCC---CCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44545444   567777777777777777777777777777777665

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.10  E-value=3.5e-11  Score=67.88  Aligned_cols=44  Identities=30%  Similarity=0.456  Sum_probs=25.2

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGE---KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCC---CSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCC---CCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444444   556666666666666666666666666666666554

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.9e-11  Score=67.69  Aligned_cols=36  Identities=31%  Similarity=0.522  Sum_probs=18.2

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A           11 KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555555555555555555555555555555443

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=5.8e-11  Score=66.94  Aligned_cols=44  Identities=16%  Similarity=0.289  Sum_probs=30.1

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSRE---KSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCC---CCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCC---CCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555554   667777777777777777777777777777777665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.09  E-value=2.4e-12  Score=77.81  Aligned_cols=53  Identities=13%  Similarity=0.253  Sum_probs=39.5

Q ss_pred             HHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHH
Q psy14799         83 AYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYL  139 (230)
Q Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l  139 (230)
                      ..|+++|+++++|.|+.|++.|.....|.   + .|.+++||.|+.|++.|...+++
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~-~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---L-FDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---H-EETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---h-hcCCCCCEECCCCCCccccCccc
Confidence            35667777888888888888887777665   4 77888888888888888766543

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.6e-11  Score=67.39  Aligned_cols=36  Identities=33%  Similarity=0.646  Sum_probs=17.8

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            444555555555555555555445554455554443

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=5.8e-11  Score=66.94  Aligned_cols=44  Identities=23%  Similarity=0.469  Sum_probs=27.3

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 h~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGE---KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCC---CSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCC---CCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44444444   566666666666666666666666666666666655

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=3.8e-11  Score=67.72  Aligned_cols=36  Identities=28%  Similarity=0.580  Sum_probs=18.0

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A           11 KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             cCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555555555555555555555555555555443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.3e-11  Score=68.62  Aligned_cols=44  Identities=27%  Similarity=0.507  Sum_probs=26.9

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGE---KPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCC---SSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCC---CCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44544444   566666666666666666666666666666666655

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.08  E-value=3.4e-11  Score=67.90  Aligned_cols=36  Identities=28%  Similarity=0.520  Sum_probs=18.5

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A           11 KPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             cCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            445555555555555555555555555555555444

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.9e-11  Score=69.00  Aligned_cols=44  Identities=23%  Similarity=0.452  Sum_probs=23.7

Q ss_pred             HHHhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCccccccc
Q psy14799         26 HITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLC   72 (230)
Q Consensus        26 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C   72 (230)
                      |+++|+++++|.|++|++.|.....|..|+++|.+.   ++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGE---KPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSC---CSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCC---CCCCCCCC
Confidence            444555555555555555555555555555555444   45555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.2e-11  Score=67.56  Aligned_cols=36  Identities=33%  Similarity=0.627  Sum_probs=19.4

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A           11 KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            455555555555555555555555555555555544

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.3e-11  Score=66.81  Aligned_cols=44  Identities=20%  Similarity=0.437  Sum_probs=30.5

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 h~~~h~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGE---KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSC---CSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCC---CCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44555544   677777777777777777777777777777777765

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.07  E-value=4.7e-11  Score=65.93  Aligned_cols=39  Identities=23%  Similarity=0.437  Sum_probs=18.6

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      ++|+++++|.|+.|++.|.+...|..|++ .|.+++||.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQR-THAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHG-GGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHH-hcCCCCCCCC
Confidence            34444444444444444444444444444 4444444444

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.06  E-value=5.8e-11  Score=66.96  Aligned_cols=36  Identities=31%  Similarity=0.544  Sum_probs=20.2

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A           11 NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455555555555555555555555555555555544

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.1e-11  Score=67.20  Aligned_cols=35  Identities=34%  Similarity=0.659  Sum_probs=18.9

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceeccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGL   99 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   99 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A           11 KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45555555555555555555555555555555544

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.8e-11  Score=65.22  Aligned_cols=37  Identities=27%  Similarity=0.488  Sum_probs=15.4

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      |.++++|.|+.|++.|.+...|..|++ .|.+++||.|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   41 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQK-MHTVKSGPSS   41 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHH-HTSCCSSCCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHH-HhCCCCCCCC
Confidence            334444444444444444444444443 3444444433

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6e-11  Score=66.90  Aligned_cols=42  Identities=26%  Similarity=0.392  Sum_probs=20.6

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      |+++|+++++|.|..|++.|.....|..|++ .|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHT-TTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            3344444455555555555555555555544 44444555443

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.4e-11  Score=66.76  Aligned_cols=41  Identities=27%  Similarity=0.370  Sum_probs=18.5

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      +++|+++++|.|+.|++.|.....|..|++ .|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRG-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHT-TTTTSSCCCCS
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHH-hhCCCCCCCCC
Confidence            334444444444444444444444444444 44444444443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.04  E-value=5.7e-11  Score=67.02  Aligned_cols=37  Identities=27%  Similarity=0.412  Sum_probs=14.4

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      |.++++|.|+.|++.|.....|..|++ .|.+++||.|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2emj_A            7 GTGEKPFECAECGKSFSISSQLATHQR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHH-HHTTSCSSSS
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHH-HhCCCCCCCC
Confidence            333333333333333333333333333 3333333333

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=5.8e-11  Score=66.98  Aligned_cols=38  Identities=26%  Similarity=0.424  Sum_probs=15.3

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      +|+++++|.|..|++.|.....|..|++ .|.+++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2em4_A            6 SGTGQRPYECIECGKAFKTKSSLICHRR-SHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSEECSSSCCEESSHHHHHHHHH-HHSSSSCCCC
T ss_pred             ccCCCcCcCCCCCCCccCCHHHHHHHHH-hcCCCCCCCC
Confidence            3333444444444444444444444433 3333444433

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1.3e-10  Score=65.22  Aligned_cols=41  Identities=20%  Similarity=0.327  Sum_probs=20.2

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccc
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCN  130 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~  130 (230)
                      |+++++|.|+.|++.|.....|..|++ .|.++++|.|+.||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHH-HHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHH-HccCCCCCCCcCCC
Confidence            344444555555555555555555544 44444555555443

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.6e-11  Score=66.43  Aligned_cols=41  Identities=24%  Similarity=0.462  Sum_probs=18.8

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      +++|+++++|.|+.|++.|.+...|..|++ .|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQR-THTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHH-TSCSSSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            334444444444444444444444444444 44444444443

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.1e-11  Score=66.58  Aligned_cols=41  Identities=24%  Similarity=0.388  Sum_probs=24.4

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      +|+++++|.|..|++.|.....|..|++ .|.+++||.|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQR-IHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHT-TTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHH-HhCCCCCCCCCCC
Confidence            4555566666666666666666666655 5556666666554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.7e-11  Score=66.67  Aligned_cols=25  Identities=32%  Similarity=0.654  Sum_probs=9.3

Q ss_pred             cCCCceecccccccccCHHHHHHHH
Q psy14799         90 TGERDVTCGLCFQSFYSKADLVRHM  114 (230)
Q Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~  114 (230)
                      +++++|.|+.|++.|.....|..|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2eow_A            8 TGEKPYKCNECGKAFRARSSLAIHQ   32 (46)
T ss_dssp             CCCCCEECTTSCCEESSHHHHHHHH
T ss_pred             CCCCCeeccccCChhcCHHHHHHHH
Confidence            3333333333333333333333333

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.6e-11  Score=66.45  Aligned_cols=41  Identities=29%  Similarity=0.378  Sum_probs=18.9

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      +++|.++++|.|..|++.|.....|..|++ .|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2emg_A            4 GSSGTGENPFICSECGKVFTHKTNLIIHQK-IHTGERPSGPS   44 (46)
T ss_dssp             CCCCCSCCSCBCTTTCCBCSSHHHHHHHHT-TTSCCCCSCSC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            334444444444444444444444444444 44444444443

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.4e-10  Score=65.29  Aligned_cols=44  Identities=30%  Similarity=0.539  Sum_probs=28.8

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGE---KPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCC---CSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCC---CCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555444   567777777777777777777777777777766653

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=1.6e-10  Score=65.73  Aligned_cols=40  Identities=20%  Similarity=0.384  Sum_probs=21.1

Q ss_pred             cCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccc
Q psy14799         90 TGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCN  130 (230)
Q Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~  130 (230)
                      .++++|.|.+|++.|.+...|..|++ .|.+++||.|++|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKL-SHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGG-GSCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHH-hcCCCCCccCCCCC
Confidence            34445555555555555555555555 55555555555554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7e-11  Score=66.61  Aligned_cols=37  Identities=32%  Similarity=0.532  Sum_probs=13.9

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      |+++++|.|.+|++.|.....|..|++ .|.+++||.|
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2em3_A            7 GTGEKPYECKVCSKAFTQKAHLAQHQK-THTGEKPSGP   43 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHH-HHCCCCCCCS
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHH-HhCCCCCCCC
Confidence            333333333333333333333333333 3333333333

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1e-10  Score=66.19  Aligned_cols=36  Identities=28%  Similarity=0.569  Sum_probs=18.7

Q ss_pred             CcccccccccccCCHHHHHHhHH-HhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVK-THTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|++ +|+++++|.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A           11 KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            44555555555555555555555 5555555555444

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.5e-11  Score=66.25  Aligned_cols=41  Identities=27%  Similarity=0.378  Sum_probs=19.0

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      +++|+++++|.|+.|++.|.....|..|++ .|.+++||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emi_A            4 GSSGTGERHYECSECGKAFIQKSTLSMHQR-IHRGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCEECSSSCCEESSHHHHHHHHG-GGCSCCCCSCC
T ss_pred             CcccCCCCCCCCCCCCcccCCHHHHHHHHh-HhCCCCCCCCC
Confidence            334444444444444444444444444444 44444444443

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.2e-11  Score=66.56  Aligned_cols=38  Identities=26%  Similarity=0.399  Sum_probs=15.6

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      +|+++++|.|+.|++.|.....|..|++ .|.+++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2yti_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCTTCCSSSCCCCSSHHHHHHHHT-TTSCSCCSST
T ss_pred             CCCCCcCeECCCCCcccCChhHHHHHhH-hcCCCCCCCC
Confidence            3334444444444444444444444433 3444444443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9.1e-11  Score=66.15  Aligned_cols=38  Identities=24%  Similarity=0.398  Sum_probs=15.1

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      +|+++++|.|++|++.|.....|..|++ .|.+++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eoh_A            6 SGSGKKPYECKECRKTFIQIGHLNQHKR-VHTGERSSGP   43 (46)
T ss_dssp             SCCCSCSCCCSSSCCCCSSHHHHHHHHH-HCSSCCSCST
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHH-HhCCCCCCCC
Confidence            3333334444444444444444444433 3333334333

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.5e-11  Score=66.23  Aligned_cols=39  Identities=28%  Similarity=0.382  Sum_probs=16.9

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      ++|+++++|.|+.|++.|.....|..|++ .|.+++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ep1_A            5 SSGTGEKPYECSDCGKSFIKKSQLHVHQR-IHTGENPSGP   43 (46)
T ss_dssp             CCCSSCCSSCCSSSCCCCSSHHHHHHHHG-GGSSSCCCSS
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHH-HhCCCCCCCC
Confidence            33444444444444444444444444444 3444444444

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.8e-11  Score=66.20  Aligned_cols=39  Identities=21%  Similarity=0.370  Sum_probs=17.0

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      ++|.++++|.|..|++.|.....|..|++ .|.+++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2em6_A            5 SSGMGEKCYKCDVCGKEFSQSSHLQTHQR-VHTGEKPSGP   43 (46)
T ss_dssp             SCCCCCCCCBCSSSCCBCSSHHHHHHHHT-TTSSSCCCCT
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCC
Confidence            33444444444444444444444444443 4444444444

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.3e-11  Score=66.53  Aligned_cols=38  Identities=24%  Similarity=0.416  Sum_probs=15.9

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      +|+++++|.|+.|++.|.....|..|++ .|.+++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eq2_A            6 SGTGGKPYQCNECGKAFSQTSKLARHQR-VHTGEKPSGP   43 (46)
T ss_dssp             SSSSSCSSSCCSSCCCCSSHHHHHHHGG-GGCCCCCCCC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHH-HcCCCCCCCC
Confidence            3344444444444444444444444443 3444444444

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.7e-11  Score=66.41  Aligned_cols=41  Identities=29%  Similarity=0.404  Sum_probs=18.6

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      +++|+++++|.|+.|++.|.....|..|++ .|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p~~C~   44 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRR-IHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGG-GTSSCCSSCCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHH-hcCCCCCcCCC
Confidence            334444444444444444444444444444 44444444443

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.3e-11  Score=66.31  Aligned_cols=39  Identities=21%  Similarity=0.370  Sum_probs=16.4

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      ++|+++++|.|+.|++.|.....|..|++ .|.+++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2yth_A            5 SSGSGEKPFQCEECGKRFTQNSHLHSHQR-VHTGEKPSGP   43 (46)
T ss_dssp             SCCCCSSSBCCSSSCCCBSSHHHHHHHGG-GGTTCCCSSC
T ss_pred             cCCCCCcCCCCCCCCcccCCHHHHHHHHH-hcCCCCCCCC
Confidence            33444444444444444444444444443 3444444444

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=65.11  Aligned_cols=38  Identities=26%  Similarity=0.521  Sum_probs=15.9

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      +|+++++|.|+.|++.|.....|..|++ .|.+++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eof_A            6 SGTGEKPYECNECQKAFNTKSNLMVHQR-THTGESGPSS   43 (44)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHH-HTTTSSCSCC
T ss_pred             CCCCCCCeECCCCCcccCCHhHHHHHHH-HhCCCCCCCC
Confidence            3344444444444444444444444443 3444444433

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.7e-11  Score=66.21  Aligned_cols=40  Identities=23%  Similarity=0.351  Sum_probs=18.0

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      +++|+++++|.|+.|++.|.....|..|++ .|.+++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eq1_A            4 GSSGTGEKPYKCNECGKAFRAHSNLTTHQV-IHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSCCCCCTTTTCCCSSHHHHHHHHT-TTCCSCCSSC
T ss_pred             ccccCCCCCeECCcCChhhCCHHHHHHHHH-HhCCCCCCCC
Confidence            334444444444444444444444444444 4444444444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.1e-11  Score=66.57  Aligned_cols=38  Identities=24%  Similarity=0.407  Sum_probs=14.9

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      +|.++++|.|..|++.|.....|..|++ .|.+++||.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~~C   43 (46)
T 2eor_A            6 SGTGEKPYNCEECGKAFIHDSQLQEHQR-IHTGEKPSGP   43 (46)
T ss_dssp             SSSCCCSEECTTTCCEESSHHHHHHHHH-HHHSCCCSSS
T ss_pred             CcCCCcCccCCCCCCCcCCHHHHHHHHH-hcCCCCCCCC
Confidence            3333333444444444444444444433 3333333333

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.4e-11  Score=66.04  Aligned_cols=41  Identities=29%  Similarity=0.459  Sum_probs=19.1

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      +++|+++++|.|..|++.|.....|..|++ .|.+++||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHT-TTSSCCSSCSC
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            334444444444444444444444444444 44444444443

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.4e-11  Score=66.30  Aligned_cols=39  Identities=28%  Similarity=0.448  Sum_probs=17.2

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      ++|.++++|.|++|++.|.....|..|++ .|.+++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHS-VHSGERPSGP   43 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTT-TTTSCCSCTT
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHH-hcCCCCCCCC
Confidence            33444444444444444444444444444 4444444444

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.9e-11  Score=65.46  Aligned_cols=41  Identities=29%  Similarity=0.372  Sum_probs=19.8

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      |+++|+++++|.|++|++.|.....|..|++ .|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQK-THSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHT-TSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHH-HcCCCCCCCC
Confidence            3344444444555555555555555555544 4444444444

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=65.87  Aligned_cols=27  Identities=22%  Similarity=0.530  Sum_probs=10.2

Q ss_pred             hcCCCceecccccccccCHHHHHHHHH
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      |.++++|.|..|++.|.....|..|++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2en9_A            7 GAGKKLFKCNECKKTFTQSSSLTVHQR   33 (46)
T ss_dssp             CCSSCCCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHH
Confidence            333333333333333333333333333

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1e-10  Score=65.20  Aligned_cols=39  Identities=26%  Similarity=0.412  Sum_probs=17.1

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      ++|+++++|.|++|++.|.....|..|++ .|.+++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2en7_A            5 SSGTGMKPYVCNECGKAFRSKSYLIIHTR-THTGESGPSS   43 (44)
T ss_dssp             CCSSSSSSSCCTTTCCCCSSHHHHHHHHT-TTCCSSSSCC
T ss_pred             cCCCCCcCeECCCCCCccCCHHHHHHHhh-hcCCCCCCCC
Confidence            33444444444444444444444444444 4444444444

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=65.81  Aligned_cols=25  Identities=36%  Similarity=0.592  Sum_probs=9.3

Q ss_pred             cCCCceecccccccccCHHHHHHHH
Q psy14799         90 TGERDVTCGLCFQSFYSKADLVRHM  114 (230)
Q Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~  114 (230)
                      +++++|.|++|++.|.....|..|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2yto_A            8 TGEKPYKCSDCGKAFTRKSGLHIHQ   32 (46)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCEECcccCCccCCHhHHHHHH
Confidence            3333333333333333333333333

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1e-10  Score=65.92  Aligned_cols=32  Identities=31%  Similarity=0.702  Sum_probs=12.1

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCCCceec
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC   97 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (230)
                      +|.|++|++.|.....|..|+++|+++++|.|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A           12 PYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             SEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            33333333333333333333333333333333

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.99  E-value=1.9e-10  Score=64.75  Aligned_cols=42  Identities=31%  Similarity=0.529  Sum_probs=28.4

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~---k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGE---KPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCC---CSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCC---CCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            55555554   6677777777777777777777777777777665

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.99  E-value=6.2e-11  Score=69.34  Aligned_cols=48  Identities=15%  Similarity=0.225  Sum_probs=22.6

Q ss_pred             cCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcc
Q psy14799         76 FLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSF  124 (230)
Q Consensus        76 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  124 (230)
                      |.....|..|+++|+++++|.|..|++.|...+.|..|++ .|.+++||
T Consensus         6 ~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~kp~   53 (54)
T 1yui_A            6 AKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE-LRHFAKPG   53 (54)
T ss_dssp             CSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH-HHTTTSCC
T ss_pred             cCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH-HhccCCCC
Confidence            3333344444444444444445445544444444444444 44444443

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.2e-10  Score=64.43  Aligned_cols=42  Identities=29%  Similarity=0.560  Sum_probs=28.8

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGE---KPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCC---CCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCC---CCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            55555554   6677777777777777777777777777777765

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.1e-10  Score=65.04  Aligned_cols=26  Identities=31%  Similarity=0.569  Sum_probs=9.7

Q ss_pred             hcCCCceecccccccccCHHHHHHHH
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHM  114 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~  114 (230)
                      |.++++|.|+.|++.|.....|..|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHE   32 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHH
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHh
Confidence            33333333333333333333333333

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.5e-10  Score=64.23  Aligned_cols=42  Identities=36%  Similarity=0.680  Sum_probs=29.0

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~---~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGE---KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSC---CSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCC---cCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            55555554   6677777777777777777777777777777765

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=7.8e-11  Score=66.43  Aligned_cols=40  Identities=23%  Similarity=0.286  Sum_probs=18.5

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      |.++++|.|++|++.|.+...|..|++ .|.+++||.|++|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWI-THTREKPSGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHT-HHHHCCCCSCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            444444444444444444444444444 4444444444443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.5e-10  Score=64.60  Aligned_cols=39  Identities=18%  Similarity=0.374  Sum_probs=17.0

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      ++|.++++|.|+.|++.|.....|..|++ .|.+++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQK-THAAKSGPSS   43 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGG-GGCCCCCTTC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHH-HcCCCCCcCC
Confidence            33444444444444444444444444444 4444444443

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.5e-10  Score=65.14  Aligned_cols=40  Identities=23%  Similarity=0.360  Sum_probs=17.9

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      +++|+++++|.|+.|++.|.....|..|++ .|.+++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQA-IHTGKKPSGP   43 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHHT-TSCCCCCCCS
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHHH-HhCCCCCCCC
Confidence            334444444444444444444444444444 4444444444

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.98  E-value=1.7e-10  Score=63.62  Aligned_cols=35  Identities=26%  Similarity=0.409  Sum_probs=13.6

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCCCcc
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSF  124 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  124 (230)
                      |.++++|.|+.|++.|.+...|..|++ .|.+++||
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~k~~   40 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQR-SCSQSGPS   40 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHH-HTTCCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhh-hcCCCCCC
Confidence            333333333333333333333333333 33333333

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3e-10  Score=63.96  Aligned_cols=42  Identities=31%  Similarity=0.523  Sum_probs=27.6

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQ---RPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCS---SSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCC---cCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            45555544   5677777777777777777777777766676665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.97  E-value=2.5e-11  Score=73.22  Aligned_cols=58  Identities=12%  Similarity=0.087  Sum_probs=49.4

Q ss_pred             HHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCcccccccccCCccccccccCCc
Q psy14799        111 VRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETW  190 (230)
Q Consensus       111 ~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~~~~C~~~f~~~~~  190 (230)
                      ..|++ .|.+++||.|+.|++.|...+.|.    ..|.+++||.|.                       +||+.|....+
T Consensus         3 ~~h~~-~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~-----------------------~C~k~f~~~~~   54 (62)
T 1vd4_A            3 ETDER-DSTNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCT-----------------------FCHTEVEEDES   54 (62)
T ss_dssp             CCCSS-SCCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCS-----------------------SSCCBCEECTT
T ss_pred             hhHHH-HcCCCCCccCCCCCchhccHHHhH----hhcCCCCCEECC-----------------------CCCCccccCcc
Confidence            45667 899999999999999999988775    789999999985                       89999999888


Q ss_pred             cccccc
Q psy14799        191 HPCHLL  196 (230)
Q Consensus       191 l~~H~~  196 (230)
                      +..+..
T Consensus        55 ~~~~~~   60 (62)
T 1vd4_A           55 AMPKKD   60 (62)
T ss_dssp             CSCCCC
T ss_pred             cccccc
Confidence            876653

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.2e-10  Score=64.48  Aligned_cols=34  Identities=35%  Similarity=0.704  Sum_probs=18.0

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A           11 KPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             cCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            4555555555555555555555555555555553

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.4e-10  Score=64.00  Aligned_cols=35  Identities=26%  Similarity=0.501  Sum_probs=14.3

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhcCCCChh
Q psy14799        118 HLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADE  153 (230)
Q Consensus       118 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  153 (230)
                      |.+++||.|++|++.|...+.|..| +..|.+++||
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H-~~~H~~~~~~   40 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSH-LRIHTGSGPS   40 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHH-TTTTSCCSST
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHH-HHhcCCCCCC
Confidence            3344444444444444444444444 3333344333

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.2e-10  Score=65.63  Aligned_cols=39  Identities=21%  Similarity=0.366  Sum_probs=17.6

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCC-CCcccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLN-IRSFTC  126 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~-~~~~~C  126 (230)
                      ++|.++++|.|+.|++.|.....|..|++ .|.+ ++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C   44 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSS
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCC
Confidence            34444444444444444444444444444 4444 444444

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.97  E-value=2.9e-10  Score=62.63  Aligned_cols=33  Identities=33%  Similarity=0.707  Sum_probs=18.5

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceec
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC   97 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (230)
                      ++|.|++|++.|.+...|..|+++|+++++|.|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            9 NPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            455555555555555555555555555555555

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.9e-10  Score=64.03  Aligned_cols=42  Identities=24%  Similarity=0.375  Sum_probs=28.9

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      |+++|+++++|.|++|++.|.....|..|++ .|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR-VHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHH-HHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            5556666777777777777777777777766 66666777665

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.6e-10  Score=61.76  Aligned_cols=33  Identities=27%  Similarity=0.641  Sum_probs=21.4

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceec
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC   97 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (230)
                      ++|.|++|++.|.+...|..|+++|+++++|.|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            9 KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            566666666666666666666666666666655

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=64.21  Aligned_cols=42  Identities=33%  Similarity=0.601  Sum_probs=23.1

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      |+++|.+.   ++|.|++|++.|.+...|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGE---KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCC---CSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCC---CCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444443   4555555555555555555555555555555554

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.6e-10  Score=64.17  Aligned_cols=42  Identities=29%  Similarity=0.565  Sum_probs=22.7

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      |+++|.+.   ++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGE---KPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSC---CSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCC---CCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444443   4555555555555555555555555555555554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.8e-10  Score=64.04  Aligned_cols=42  Identities=26%  Similarity=0.578  Sum_probs=27.9

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~---~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGE---KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCC---CSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCC---cCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            55555544   5677777777777777777777777777777665

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.1e-10  Score=64.42  Aligned_cols=25  Identities=32%  Similarity=0.691  Sum_probs=9.3

Q ss_pred             cCCCceecccccccccCHHHHHHHH
Q psy14799         90 TGERDVTCGLCFQSFYSKADLVRHM  114 (230)
Q Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~  114 (230)
                      +++++|.|+.|++.|.....|..|+
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~   31 (42)
T 2ytb_A            7 GGEKPYRCDQCGKAFSQKGSLIVHI   31 (42)
T ss_dssp             CSCCSBCCTTTTCCBSSHHHHHTTG
T ss_pred             CCCCCeeCCCccchhCCHHHHHHHH
Confidence            3333333333333333333333333

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.6e-10  Score=62.88  Aligned_cols=42  Identities=33%  Similarity=0.672  Sum_probs=27.1

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGE---KPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCC---CSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCC---CCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            55555444   5666666776676666677776666666666663

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=64.30  Aligned_cols=34  Identities=35%  Similarity=0.725  Sum_probs=17.4

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A           11 KPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4455555555555555555555555555555543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.3e-10  Score=64.40  Aligned_cols=34  Identities=35%  Similarity=0.644  Sum_probs=17.9

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A           11 RHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4555555555555555555555555555555553

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4e-10  Score=63.43  Aligned_cols=42  Identities=26%  Similarity=0.479  Sum_probs=27.9

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 h~~~H~~~---k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGK---KLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSS---CCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCC---CCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            45555544   6677777777777777777777777777777665

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=64.31  Aligned_cols=34  Identities=38%  Similarity=0.726  Sum_probs=17.8

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A           11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             cCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            4455555555555555555555555555555543

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.6e-10  Score=64.22  Aligned_cols=34  Identities=41%  Similarity=0.835  Sum_probs=17.7

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A           11 KPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4455555555555555555555555555555543

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.8e-10  Score=64.07  Aligned_cols=34  Identities=35%  Similarity=0.722  Sum_probs=18.4

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A           11 KCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4555555555555555555555555555555553

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.5e-10  Score=63.68  Aligned_cols=43  Identities=30%  Similarity=0.543  Sum_probs=28.7

Q ss_pred             HhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         53 RHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        53 ~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      +|+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGE---KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSC---CCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCC---CCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            355555554   6677777777777777777777777777777664

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.9e-10  Score=64.78  Aligned_cols=41  Identities=22%  Similarity=0.451  Sum_probs=21.9

Q ss_pred             HHhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCccccc
Q psy14799         27 ITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCD   70 (230)
Q Consensus        27 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~   70 (230)
                      +++|.+++||.|++|++.|.....|.+|+++|.+.   ++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGE---RPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSC---CSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCC---CCCCCC
Confidence            44455555555555555555555555555555444   455554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.7e-10  Score=63.14  Aligned_cols=42  Identities=29%  Similarity=0.595  Sum_probs=23.8

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGK---KPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCS---CSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCC---CCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444443   5566666666666666666666666666666554

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=65.49  Aligned_cols=32  Identities=38%  Similarity=0.725  Sum_probs=12.6

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCCCceec
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC   97 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (230)
                      +|.|++|++.|.....|..|+++|+++++|.|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A           12 PFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            33333333333333333333333333333333

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.7e-10  Score=63.56  Aligned_cols=34  Identities=41%  Similarity=0.706  Sum_probs=18.2

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A           11 NPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4555555555555555555555555555555553

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.6e-10  Score=64.18  Aligned_cols=34  Identities=38%  Similarity=0.799  Sum_probs=17.4

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A           11 KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             cCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            4455555555555555555555555555555543

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.2e-10  Score=64.28  Aligned_cols=22  Identities=32%  Similarity=0.523  Sum_probs=8.0

Q ss_pred             CCceecccccccccCHHHHHHH
Q psy14799         92 ERDVTCGLCFQSFYSKADLVRH  113 (230)
Q Consensus        92 ~~~~~C~~C~~~f~~~~~l~~H  113 (230)
                      +++|.|+.|++.|.+...|..|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H   30 (42)
T 2en2_A            9 EKPYKCETCGARFVQVAHLRAH   30 (42)
T ss_dssp             SCSEECTTTCCEESSHHHHHHH
T ss_pred             CCCEeCCCcChhhCCHHHHHHH
Confidence            3333333333333333333333

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=63.76  Aligned_cols=36  Identities=33%  Similarity=0.669  Sum_probs=18.5

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            445555555555555555555555555555555444

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.8e-10  Score=64.88  Aligned_cols=36  Identities=19%  Similarity=0.459  Sum_probs=14.4

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhcCCCChhh
Q psy14799        118 HLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEA  154 (230)
Q Consensus       118 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~  154 (230)
                      |.++++|.|++|++.|...+.|.+| +..|.+++||.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H-~~~H~~~k~~~   42 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQH-QRVHSGEKPSG   42 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHH-GGGSCCSCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHH-HHHhCCCCCCC
Confidence            3333444444444444444444444 33333333333

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=9e-10  Score=61.62  Aligned_cols=37  Identities=30%  Similarity=0.693  Sum_probs=25.1

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceeccccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCF  101 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  101 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+.|+
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            9 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            5666666666666666666666666666666666664

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.7e-10  Score=63.51  Aligned_cols=29  Identities=31%  Similarity=0.469  Sum_probs=10.7

Q ss_pred             ccccccccccCCHHHHHHhHHHhcCCCce
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKTHTGERDV   95 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   95 (230)
                      |.|++|++.|.....|..|+++|+++++|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (44)
T 2eou_A           13 SECQECGKIFRHSSLLIEHQALHAGESGP   41 (44)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHTTSCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHHCCCCCC
Confidence            33333333333333333333333333333

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.3e-10  Score=63.27  Aligned_cols=34  Identities=32%  Similarity=0.680  Sum_probs=18.9

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A           11 RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            4555555555555555555555555555555553

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.1e-10  Score=63.83  Aligned_cols=34  Identities=32%  Similarity=0.709  Sum_probs=18.1

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A           11 KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4555555555555555555555555555555553

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.1e-10  Score=63.85  Aligned_cols=34  Identities=32%  Similarity=0.653  Sum_probs=17.9

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A           11 KPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4555555555555555555555555555555553

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.4e-10  Score=62.98  Aligned_cols=33  Identities=39%  Similarity=0.779  Sum_probs=18.2

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceec
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC   97 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A           11 KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             cCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            455555555555555555555555555555554

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.93  E-value=2.2e-10  Score=66.90  Aligned_cols=50  Identities=10%  Similarity=0.185  Sum_probs=29.1

Q ss_pred             cccCChHHHHHhHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCce
Q psy14799         43 MSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDV   95 (230)
Q Consensus        43 ~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   95 (230)
                      +.|.....|..|+++|.+.   ++|.|++|++.|.....|..|+++|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSE---QPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSS---CCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCC---CCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            3445555555566555554   5566666666666666666666666665554

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=5.6e-10  Score=63.47  Aligned_cols=38  Identities=26%  Similarity=0.575  Sum_probs=23.7

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQ  102 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  102 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|++|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            55666666666666666666666666666666666653

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3.7e-10  Score=62.88  Aligned_cols=41  Identities=22%  Similarity=0.490  Sum_probs=24.1

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceec
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC   97 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGE---NPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCC---CSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCC---CCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            44444444   556666666666666666666666666666655

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.1e-10  Score=62.75  Aligned_cols=40  Identities=23%  Similarity=0.406  Sum_probs=18.5

Q ss_pred             HHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         86 VKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      +++|+++++|.|.+|++.|.....|..|++ .|.+++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~~   43 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHER-THAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHG-GGSSCSCCCC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHh-HhcCCCCCCC
Confidence            334444444444444444444444444444 4444444443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.6e-10  Score=62.82  Aligned_cols=36  Identities=22%  Similarity=0.492  Sum_probs=18.4

Q ss_pred             HHHhhcCCCcccccccccccCChHHHHHhHhccCCC
Q psy14799         26 HITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMD   61 (230)
Q Consensus        26 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   61 (230)
                      |+++|++++||.|+.|++.|.....|..|+++|.+.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   37 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGS   37 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCC
Confidence            334455555555555555555555555555544444

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.2e-10  Score=63.85  Aligned_cols=42  Identities=24%  Similarity=0.367  Sum_probs=24.6

Q ss_pred             HHhcCCCceecc--cccccccCHHHHHHHHHhhcCCCCccccccc
Q psy14799         87 KTHTGERDVTCG--LCFQSFYSKADLVRHMKGRHLNIRSFTCHLC  129 (230)
Q Consensus        87 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  129 (230)
                      ++|+++++|.|.  .|++.|.....|..|++ .|.+++||.|.+|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHT-TSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHH-HhCCCCCCCCCCC
Confidence            345555566665  56666666666666655 5556666666554

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.8e-10  Score=63.53  Aligned_cols=36  Identities=28%  Similarity=0.477  Sum_probs=22.4

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|++|++.|.+...|..|+++|+++++|.|++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A           11 KPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            556666666666666666666666666666666554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=2.1e-10  Score=64.57  Aligned_cols=42  Identities=19%  Similarity=0.466  Sum_probs=22.4

Q ss_pred             HHHhhcCCCcccccccccccCChHHHHHhHhccCC-CCCCCccccc
Q psy14799         26 HITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHM-DISLRPFPCD   70 (230)
Q Consensus        26 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-~~~~~~~~C~   70 (230)
                      |+++|.+++||.|+.|++.|.....|..|+++|.+ .   ++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~---~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGV---KSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCC---TTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCC---CCCCCC
Confidence            34455555555555555555555555555555544 3   455553

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.9e-10  Score=62.34  Aligned_cols=36  Identities=19%  Similarity=0.449  Sum_probs=17.3

Q ss_pred             HHHhhcCCCcccccccccccCChHHHHHhHhccCCC
Q psy14799         26 HITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMD   61 (230)
Q Consensus        26 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   61 (230)
                      |+++|.+++||.|++|++.|.....|..|+++|.+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQ   38 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSS
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCC
Confidence            344444444555555555555555555554444433

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.3e-10  Score=65.40  Aligned_cols=8  Identities=38%  Similarity=1.090  Sum_probs=2.8

Q ss_pred             cccccccc
Q psy14799         69 CDLCEQRF   76 (230)
Q Consensus        69 C~~C~~~f   76 (230)
                      |++|++.|
T Consensus        15 C~~C~k~F   22 (46)
T 2en3_A           15 CKECGMNF   22 (46)
T ss_dssp             CSSSCCEE
T ss_pred             CcccChhh
Confidence            33333333

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.5e-10  Score=63.20  Aligned_cols=42  Identities=24%  Similarity=0.386  Sum_probs=27.4

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      |+++|.++++|.|+.|++.|.....|..|++ .|.+++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLR-LHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHH-HHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            4555666666666666666666666666666 66666666665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.90  E-value=8.5e-10  Score=60.67  Aligned_cols=41  Identities=17%  Similarity=0.396  Sum_probs=26.5

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceec
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC   97 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (230)
                      |+++|.+.   ++|.|++|++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~---~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGE---TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSS---CCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCC---CCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34444444   567777777777777777777777777766665

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.7e-10  Score=63.07  Aligned_cols=34  Identities=29%  Similarity=0.644  Sum_probs=18.4

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A           11 KPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4555555555555555555555555555555553

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.7e-10  Score=62.82  Aligned_cols=38  Identities=32%  Similarity=0.498  Sum_probs=18.4

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      |.++++|.|.+|++.|.....|..|++ .|.+++||.|+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQR-IHTGEKSGPSS   44 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHT-TTSSCCCCCSC
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHH-HhCCCCCCCCC
Confidence            444444455555555554444555544 44444444443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=5e-10  Score=62.36  Aligned_cols=33  Identities=27%  Similarity=0.592  Sum_probs=16.6

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceec
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC   97 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A           11 KRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             SSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            445555555555555555555555555554444

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.1e-09  Score=60.95  Aligned_cols=42  Identities=14%  Similarity=0.181  Sum_probs=28.7

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      |+++|.++++|.|..|++.|.....|..|++ .|.+++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQA-LHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHH-HHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHH-HHCCCCCCCCC
Confidence            4455666677777777777777777777776 66777777663

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.1e-10  Score=63.37  Aligned_cols=41  Identities=24%  Similarity=0.570  Sum_probs=22.2

Q ss_pred             HHhhcCCCcccccccccccCChHHHHHhHhccCCCCCCCccccc
Q psy14799         27 ITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCD   70 (230)
Q Consensus        27 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~   70 (230)
                      +++|.++++|.|++|++.|.....|..|+++|.+.   ++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~---k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGE---KPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCS---CCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCC---CCCCCC
Confidence            34455555555555555555555555555555444   455553

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.8e-10  Score=64.16  Aligned_cols=31  Identities=29%  Similarity=0.564  Sum_probs=12.3

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCCCcee
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGERDVT   96 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   96 (230)
                      +|.|++|++.|.....|..|+++|+++++|.
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A           12 SYNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CEEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CeECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            3344444444444333444433333333333

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=6.1e-10  Score=62.66  Aligned_cols=22  Identities=23%  Similarity=0.554  Sum_probs=8.0

Q ss_pred             CceecccccccccCHHHHHHHH
Q psy14799         93 RDVTCGLCFQSFYSKADLVRHM  114 (230)
Q Consensus        93 ~~~~C~~C~~~f~~~~~l~~H~  114 (230)
                      ++|.|+.|++.|.....|..|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~   32 (46)
T 2eom_A           11 RGHRCSDCGKFFLQASNFIQHR   32 (46)
T ss_dssp             SSCCCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCCCCCCCeeCChHHHHHHH
Confidence            3333333333333333333333

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=4.7e-10  Score=61.80  Aligned_cols=41  Identities=20%  Similarity=0.343  Sum_probs=38.6

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      |+++|.++++|.|+.|++.|...+.|..|++ .|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-IHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTT-TTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHH-hcCCCCCCCC
Confidence            5678999999999999999999999999999 9999999987

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.87  E-value=1e-09  Score=60.75  Aligned_cols=22  Identities=32%  Similarity=0.484  Sum_probs=8.0

Q ss_pred             CceecccccccccCHHHHHHHH
Q psy14799         93 RDVTCGLCFQSFYSKADLVRHM  114 (230)
Q Consensus        93 ~~~~C~~C~~~f~~~~~l~~H~  114 (230)
                      ++|.|..|++.|.....|..|+
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~   30 (43)
T 2yrm_A            9 GAFFCNECDCRFSEEASLKRHT   30 (43)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHH
T ss_pred             CCEECCCCCCeeCChHHHHHHH
Confidence            3333333333333333333333

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.2e-10  Score=60.98  Aligned_cols=41  Identities=29%  Similarity=0.608  Sum_probs=25.6

Q ss_pred             hHhccCCCCCCCcccccccccccCCHHHHHHhHHHhcCCCceec
Q psy14799         54 HKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC   97 (230)
Q Consensus        54 H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (230)
                      |+++|.+.   ++|.|+.|++.|.+...|..|+++|+++++|.|
T Consensus         2 H~~~H~~~---k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGE---KPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSS---CSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCC---CCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            34444444   566666666666666666666666666666655

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.5e-10  Score=63.19  Aligned_cols=42  Identities=21%  Similarity=0.335  Sum_probs=26.0

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      |+++|+++++|.|.+|++.|.....|..|++ .|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHH-HHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            4555666666666666666666666666665 56666666664

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6.8e-10  Score=61.78  Aligned_cols=41  Identities=22%  Similarity=0.297  Sum_probs=22.2

Q ss_pred             hHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         85 HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      |+++|+++++|.|++|++.|.....|..|++ .|.+++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQK-IHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHH-HHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHH-HhCCCCCCCC
Confidence            3444555555555555555555555555555 5555555554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.6e-09  Score=59.97  Aligned_cols=34  Identities=32%  Similarity=0.543  Sum_probs=23.2

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A           11 RGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            5666666666666666666666666666666664

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.6e-09  Score=58.34  Aligned_cols=36  Identities=28%  Similarity=0.520  Sum_probs=16.3

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhcCCCChhh
Q psy14799        118 HLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEA  154 (230)
Q Consensus       118 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~  154 (230)
                      |.+++||.|++|++.|...+.|..| +..|.+++||.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H-~~~H~~~k~~~   40 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLH-ERIHTGSGPSS   40 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHH-GGGCCCCSCSC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHH-HHHhCCCCCcC
Confidence            4444444444444444444444444 33444444443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=3.2e-10  Score=71.05  Aligned_cols=48  Identities=27%  Similarity=0.436  Sum_probs=22.9

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHH
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      +++.|+.|+..|. ...|..|+ .+.+++++.|+.|++.|.. ..|..|++
T Consensus        16 r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~   63 (75)
T 2d9k_A           16 RLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPE   63 (75)
T ss_dssp             CCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHH
T ss_pred             cccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHH
Confidence            4455555554442 44445554 4444445555555544442 44444444

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.3e-09  Score=59.61  Aligned_cols=33  Identities=33%  Similarity=0.702  Sum_probs=17.3

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceec
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTC   97 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A           11 KPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             cCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            455555555555555555555555555555443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=3e-09  Score=58.11  Aligned_cols=39  Identities=26%  Similarity=0.360  Sum_probs=36.5

Q ss_pred             HHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         87 KTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      ++|+++++|.|+.|++.|.....|..|++ .|.+++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHER-IHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGG-GCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHH-HhCCCCCcCC
Confidence            36789999999999999999999999998 9999999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.2e-09  Score=59.96  Aligned_cols=34  Identities=35%  Similarity=0.742  Sum_probs=19.1

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A           11 KPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             cCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            4555555555555555555555555555555554

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.78  E-value=5.4e-09  Score=57.77  Aligned_cols=34  Identities=21%  Similarity=0.457  Sum_probs=23.1

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      ++|.|+.|++.|.....|..|+++|+++++|.|+
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            9 GAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            5666666666666666666666666666666664

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.5e-09  Score=60.60  Aligned_cols=36  Identities=28%  Similarity=0.560  Sum_probs=18.7

Q ss_pred             Cccccc--ccccccCCHHHHHHhHHHhcCCCceecccc
Q psy14799         65 RPFPCD--LCEQRFLNKSHLAYHVKTHTGERDVTCGLC  100 (230)
Q Consensus        65 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  100 (230)
                      ++|.|.  .|++.|.....|..|+++|+++++|.|..|
T Consensus        11 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           11 KPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445554  455555555555555555555555555444

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.9e-10  Score=70.64  Aligned_cols=65  Identities=20%  Similarity=0.219  Sum_probs=56.1

Q ss_pred             HHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799         81 HLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus        81 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      .|..|++++.+++++.|..|++.|. ...|..|+  .|.+++|+.|+.|++.|. ...|..| ...|.++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~--~~c~~~~~~C~~C~~~~~-~~~l~~H-~~~c~~~   68 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE--DYCGARTELCGNCGRNVL-VKDLKTH-PEVCGRE   68 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH--HHHHHCEEECSSSCCEEE-TTGGGTH-HHHBTTB
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH--hHcCCCceEcccCCCcCc-HHHHHHH-HHHccCC
Confidence            4667888899999999999999995 89999998  478899999999999988 4899999 5667554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=9.2e-09  Score=62.03  Aligned_cols=41  Identities=20%  Similarity=0.320  Sum_probs=30.7

Q ss_pred             hcCCCCcccccc--cccccCChHHHHHHHHhhcCCCChhhhhh
Q psy14799        117 RHLNIRSFTCHL--CNKGFFRKSYLKVHLLTIHMQPADEAQNA  157 (230)
Q Consensus       117 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~c~~  157 (230)
                      ..++++||.|..  |++.|...+.|.+|++++|++++|+.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            356778888864  88888888888888667788888877653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.70  E-value=9.6e-09  Score=55.38  Aligned_cols=37  Identities=24%  Similarity=0.497  Sum_probs=22.1

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhcCCCChhhh
Q psy14799        118 HLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQ  155 (230)
Q Consensus       118 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c  155 (230)
                      |.+++||.|++|++.|...+.|..| ...|.+++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H-~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGH-MNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHH-HHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHH-HHHcCCCcccee
Confidence            3455666666666666666666666 455666666553

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=7.9e-09  Score=66.65  Aligned_cols=64  Identities=14%  Similarity=0.211  Sum_probs=51.3

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCCCChhhhhhccCCCCCCCCCcccccccccCCccccccccCCccccccc
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHSGGICGSMWRVETWHPCHLL  196 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~~~~C~~~f~~~~~l~~H~~  196 (230)
                      .|.+++||.|++|++.|...+.|..| ...|.+++||.|.                       .    +.....|..|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H-~~~Ht~ekp~~C~-----------------------~----~~~~~~~~~~~~   70 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSH-LNIHNEEFQKRAK-----------------------R----QERRKQLLSKQK   70 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHH-HHHHHHHHHHHCC-----------------------C----CSCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHH-HHHhCCCCCcccc-----------------------h----hhhHHHHHhhhc
Confidence            68889999999999999999999999 6678888898864                       2    245788889999


Q ss_pred             cccCCCCCCCCC
Q psy14799        197 TERNRQPPYSQD  208 (230)
Q Consensus       197 ~h~~~~~~~~~~  208 (230)
                      +|.+.-.++.+.
T Consensus        71 ~~~~~~~~~~~~   82 (88)
T 1x6f_A           71 YADGAFADFKQE   82 (88)
T ss_dssp             CCCCSSSCCCCC
T ss_pred             cccccccccccc
Confidence            988765555443

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.63  E-value=2.9e-08  Score=53.42  Aligned_cols=36  Identities=31%  Similarity=0.367  Sum_probs=20.6

Q ss_pred             cCCCceecccccccccCHHHHHHHHHhhcCCCCcccc
Q psy14799         90 TGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTC  126 (230)
Q Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  126 (230)
                      +++++|.|..|++.|...+.|..|++ .|.+++||.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMN-VHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHH-TTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHH-HcCCCcccee
Confidence            44555666666666666666666655 5555555543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.62  E-value=1.2e-08  Score=54.28  Aligned_cols=35  Identities=31%  Similarity=0.595  Sum_probs=23.3

Q ss_pred             HHHhhcCCCcccccccccccCChHHHHHhHhccCC
Q psy14799         26 HITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHM   60 (230)
Q Consensus        26 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (230)
                      |+++|.+++||.|+.|++.|.....|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45566667777777777777777777777666543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=7.2e-08  Score=58.16  Aligned_cols=38  Identities=21%  Similarity=0.327  Sum_probs=19.4

Q ss_pred             cCCCceeccc--ccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         90 TGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        90 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      ++++||+|..  |++.|...+.|.+|++..|++++||.|.
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            3455555543  5555555555555542245555555553

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.54  E-value=6.2e-08  Score=50.56  Aligned_cols=33  Identities=24%  Similarity=0.408  Sum_probs=20.1

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhcCCCC
Q psy14799        118 HLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPA  151 (230)
Q Consensus       118 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  151 (230)
                      |.++++|.|++|++.|...+.|..| ...|.+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H-~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSH-IREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHH-HHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHH-HHHHcCCC
Confidence            4556666666666666666666666 44454443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.54  E-value=3.3e-08  Score=52.43  Aligned_cols=26  Identities=31%  Similarity=0.691  Sum_probs=13.6

Q ss_pred             hcCCCCcccccccccccCChHHHHHH
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H  142 (230)
                      .|.+++||.|+.|++.|...+.|..|
T Consensus         5 ~h~~~k~~~C~~C~k~f~~~~~l~~H   30 (37)
T 1p7a_A            5 GSTGIKPFQCPDCDRSFSRSDHLALH   30 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHH
T ss_pred             cCCCCCCccCCCCCcccCcHHHHHHH
Confidence            44455555555555555555555555

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.53  E-value=7e-08  Score=50.40  Aligned_cols=33  Identities=27%  Similarity=0.547  Sum_probs=19.9

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhcCCCC
Q psy14799        118 HLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPA  151 (230)
Q Consensus       118 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  151 (230)
                      |.+++||.|++|++.|...+.|.+| +..|.+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H-~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARH-LKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHH-HGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHH-HHHcCCCC
Confidence            4556666666666666666666666 44454443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=6.4e-08  Score=51.26  Aligned_cols=34  Identities=24%  Similarity=0.510  Sum_probs=22.5

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCCCC
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPA  151 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  151 (230)
                      .|.+++||.|+.|++.|...+.|..| ...|.+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H-~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSH-IKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHH-HHHHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHH-HHHHcCCC
Confidence            46666777777777777777777777 44555544

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=3.2e-08  Score=52.49  Aligned_cols=28  Identities=32%  Similarity=0.738  Sum_probs=14.1

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      ++|.|+.|++.|.....|..|+++|+++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            8 RSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            4455555555555555555555555444

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.50  E-value=9.4e-08  Score=49.36  Aligned_cols=30  Identities=30%  Similarity=0.645  Sum_probs=15.8

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCCCce
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGERDV   95 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   95 (230)
                      ||.|++|++.|.....|..|+++|+++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555555555555555555555555444

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.49  E-value=1e-07  Score=49.72  Aligned_cols=32  Identities=25%  Similarity=0.565  Sum_probs=16.5

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCC
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNI  121 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (230)
                      |+++++|.|..|++.|.....|..|++ .|.++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIR-EVHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHH-HTSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHH-HHcCC
Confidence            344555555555555555555555555 44444

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.48  E-value=1.1e-07  Score=49.65  Aligned_cols=33  Identities=33%  Similarity=0.738  Sum_probs=20.3

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCCC
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIR  122 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (230)
                      |.++++|.|..|++.|.....|..|++ .|.+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG-GGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHH-HcCCCC
Confidence            455666666666666666666666665 555544

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.42  E-value=1.4e-07  Score=49.77  Aligned_cols=26  Identities=31%  Similarity=0.474  Sum_probs=20.0

Q ss_pred             cCCCCcccccccccccCChHHHHHHH
Q psy14799        118 HLNIRSFTCHLCNKGFFRKSYLKVHL  143 (230)
Q Consensus       118 H~~~~~~~C~~C~~~f~~~~~l~~H~  143 (230)
                      +.+++||.|+.|+++|...+.|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45677888888888888888888884

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.7e-07  Score=49.70  Aligned_cols=33  Identities=21%  Similarity=0.362  Sum_probs=21.5

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCC
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      .|.+++||.|+.|++.|...+.|..|++..|.+
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            466666777777777777777777774445543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.39  E-value=2.1e-07  Score=52.58  Aligned_cols=36  Identities=17%  Similarity=0.438  Sum_probs=26.4

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCCCCh
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPAD  152 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  152 (230)
                      .|.+++||.|.+|++.|...+.|..|++..|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            367888899999999999999999995547766543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.39  E-value=2.5e-07  Score=47.71  Aligned_cols=30  Identities=37%  Similarity=0.702  Sum_probs=17.3

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCChh
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLTIHMQPADE  153 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  153 (230)
                      ||.|++|++.|...+.|..| +..|.++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H-~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKH-ITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHH-HHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHH-HHHhCCCCCC
Confidence            45566666666666666666 4455555554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.37  E-value=2.9e-08  Score=63.98  Aligned_cols=42  Identities=17%  Similarity=0.197  Sum_probs=23.8

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCCCCcccccccc
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCN  130 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~  130 (230)
                      +|+++++|.|+.|++.|.....|..|++ .|.+++||.|..|.
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLN-IHNEEFQKRAKRQE   60 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHH-HHHHHHHHHCCCCS
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHH-HhCCCCCcccchhh
Confidence            3555555666666666665555666655 55555555555443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=3.6e-07  Score=47.95  Aligned_cols=32  Identities=31%  Similarity=0.482  Sum_probs=20.7

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCC
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      .|.+++||.|++|++.|...+.|..| ...|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H-~~~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAH-MNRHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHH-HHHSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHH-HHHhcc
Confidence            45666677777777777777777777 445544

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=3.1e-07  Score=48.14  Aligned_cols=33  Identities=24%  Similarity=0.363  Sum_probs=22.1

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      .|.+++||.|++|++.|...+.|..| +..|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H-~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVH-LRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHH-HHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHH-HHHccCC
Confidence            46666777777777777777777777 4455443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=3.4e-07  Score=48.93  Aligned_cols=31  Identities=23%  Similarity=0.308  Sum_probs=20.4

Q ss_pred             cCCCCcccccc--cccccCChHHHHHHHHhhcCC
Q psy14799        118 HLNIRSFTCHL--CNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       118 H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      +.+++||.|++  |++.|...+.|.+| +..|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H-~r~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAH-LKVHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHH-HHHHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHH-HHhcCC
Confidence            45667777765  77777777777777 455544

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=9.3e-08  Score=50.75  Aligned_cols=31  Identities=26%  Similarity=0.397  Sum_probs=17.3

Q ss_pred             hhcCCCcccccccccccCChHHHHHh-HhccC
Q psy14799         29 TVHGDKSFQCDECDMSFGTHQALGRH-KQCKH   59 (230)
Q Consensus        29 ~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~   59 (230)
                      +|++++||+|+.|++.|.....|..| +++|.
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            44555556666666666555555555 44443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=3.5e-07  Score=47.99  Aligned_cols=33  Identities=18%  Similarity=0.383  Sum_probs=21.0

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      .|.+++||.|++|++.|...+.|..| +..|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H-~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRH-MLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHH-HTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHH-HHHhcCC
Confidence            35566667777777777777777777 4455443

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=3.9e-07  Score=47.72  Aligned_cols=33  Identities=27%  Similarity=0.460  Sum_probs=22.7

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      .|.++++|.|++|++.|...+.|..| +..|.++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H-~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSH-KLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHH-HHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHH-HHHhcCC
Confidence            45667777777777777777777777 4555443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.34  E-value=2.4e-07  Score=49.32  Aligned_cols=35  Identities=23%  Similarity=0.331  Sum_probs=19.7

Q ss_pred             cCCCCccccc--ccccccCChHHHHHHHHhhcCCCChh
Q psy14799        118 HLNIRSFTCH--LCNKGFFRKSYLKVHLLTIHMQPADE  153 (230)
Q Consensus       118 H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~  153 (230)
                      |.+++||.|.  .|++.|...+.|.+| ...|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H-~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVH-KHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHH-HHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHH-HHHhCCCCCC
Confidence            3455566666  366666666666666 3445555443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.31  E-value=3.6e-07  Score=48.14  Aligned_cols=25  Identities=24%  Similarity=0.272  Sum_probs=14.4

Q ss_pred             cCCCceecccccccccCHHHHHHHH
Q psy14799         90 TGERDVTCGLCFQSFYSKADLVRHM  114 (230)
Q Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~  114 (230)
                      .+++||+|+.|++.|...+.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3455566666666666665555554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=5.5e-07  Score=47.20  Aligned_cols=31  Identities=32%  Similarity=0.553  Sum_probs=16.5

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCC
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLN  120 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (230)
                      |.++++|.|++|++.|.....|..|++ .|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMN-RHST   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHH-HSST
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHH-Hhcc
Confidence            444555555555555555555555555 4443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.29  E-value=4.1e-07  Score=48.35  Aligned_cols=34  Identities=24%  Similarity=0.418  Sum_probs=16.1

Q ss_pred             cCCCceecc--cccccccCHHHHHHHHHhhcCCCCcc
Q psy14799         90 TGERDVTCG--LCFQSFYSKADLVRHMKGRHLNIRSF  124 (230)
Q Consensus        90 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~  124 (230)
                      +++++|.|.  .|++.|...+.|..|++ .|.+++||
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKH-KHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHH-HHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHH-HhCCCCCC
Confidence            344445554  25555555555555544 44444443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=5.1e-07  Score=47.26  Aligned_cols=27  Identities=33%  Similarity=0.746  Sum_probs=13.5

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   91 (230)
                      ++|.|+.|++.|.....|..|+++|++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            8 KPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            445555555555555555555544444

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=3.3e-07  Score=48.40  Aligned_cols=32  Identities=25%  Similarity=0.413  Sum_probs=22.7

Q ss_pred             hcCCCCcccccccccccCCh-HHHHHHHHhhcCC
Q psy14799        117 RHLNIRSFTCHLCNKGFFRK-SYLKVHLLTIHMQ  149 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~-~~l~~H~~~~H~~  149 (230)
                      .|.+++||.|+.|++.|... +.|..| ...|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H-~~~H~~   35 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRH-IWAHEG   35 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHH-HHHHHT
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHH-HHhcCC
Confidence            46677777777777777777 777777 445544

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=6.4e-07  Score=46.93  Aligned_cols=33  Identities=39%  Similarity=0.574  Sum_probs=21.4

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      .|.+++||.|+.|++.|...+.|..| +..|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H-~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAH-LRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHH-HHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHH-HHHhCCC
Confidence            35566677777777777777777777 4445443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=7.4e-07  Score=47.56  Aligned_cols=27  Identities=30%  Similarity=0.491  Sum_probs=15.2

Q ss_pred             Ccccccc--cccccCCHHHHHHhHHHhcC
Q psy14799         65 RPFPCDL--CEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        65 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   91 (230)
                      +||.|+.  |++.|.....|..|+++|++
T Consensus         8 kp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            8 ILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            5555554  55555555555555555554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=7.8e-07  Score=46.58  Aligned_cols=31  Identities=26%  Similarity=0.373  Sum_probs=17.5

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCC
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLN  120 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (230)
                      |.++++|.|..|++.|...+.|..|++ .|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHML-VHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHT-TTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHH-HhcC
Confidence            445555566666666665555655555 4544

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=8.6e-07  Score=46.35  Aligned_cols=28  Identities=32%  Similarity=0.687  Sum_probs=15.9

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      ++|.|++|++.|.....|..|+++|+++
T Consensus         8 ~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            8 KTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            4555555555555555555555555543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.21  E-value=6.5e-07  Score=50.48  Aligned_cols=32  Identities=22%  Similarity=0.487  Sum_probs=21.3

Q ss_pred             hcCCCcccccccccccCChHHHHHhHh-ccCCC
Q psy14799         30 VHGDKSFQCDECDMSFGTHQALGRHKQ-CKHMD   61 (230)
Q Consensus        30 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~   61 (230)
                      |++++||.|.+|++.|.....|..|++ +|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            556677777777777777777777776 65544

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=1.2e-06  Score=45.89  Aligned_cols=28  Identities=36%  Similarity=0.737  Sum_probs=15.0

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      ++|.|+.|++.|.....|..|+++|+++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            4555555555555555555555555443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=3.5e-07  Score=48.33  Aligned_cols=27  Identities=33%  Similarity=0.757  Sum_probs=13.4

Q ss_pred             CcccccccccccCCH-HHHHHhHHHhcC
Q psy14799         65 RPFPCDLCEQRFLNK-SHLAYHVKTHTG   91 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~-~~l~~H~~~h~~   91 (230)
                      ++|.|+.|++.|... ..|..|+++|++
T Consensus         8 k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            8 RAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            445555555555554 455555554443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.17  E-value=1.1e-06  Score=43.78  Aligned_cols=29  Identities=34%  Similarity=0.744  Sum_probs=20.5

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      +||.|+.|++.|.+.+.|..|++..|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            36777777777777777777755666554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.15  E-value=1.9e-06  Score=42.45  Aligned_cols=26  Identities=35%  Similarity=0.865  Sum_probs=12.5

Q ss_pred             cccccccccccCCHHHHHHhHHHhcC
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~   91 (230)
                      +|.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            34444444444444444444444443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=2e-06  Score=42.60  Aligned_cols=27  Identities=22%  Similarity=0.554  Sum_probs=16.1

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      +||.|+.|++.|...+.|..| ...|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H-~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRH-LETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHH-HHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHH-HHHhcc
Confidence            456666666666666666666 344443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.11  E-value=1.5e-06  Score=45.92  Aligned_cols=33  Identities=27%  Similarity=0.492  Sum_probs=21.8

Q ss_pred             hcCCCCcccccc--cccccCChHHHHHHHHhhcCCC
Q psy14799        117 RHLNIRSFTCHL--CNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       117 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      .|.+++||.|.+  |++.|...+.|..| ...|.++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H-~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAH-LRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHH-HHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHH-HHhcCCC
Confidence            356677777763  77777777777777 4455443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.11  E-value=1.1e-07  Score=48.65  Aligned_cols=30  Identities=27%  Similarity=0.525  Sum_probs=19.2

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCChh
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLTIHMQPADE  153 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  153 (230)
                      ||.|+.|++.|...+.|.+| +..|.+++|+
T Consensus         2 p~~C~~C~k~f~~~~~L~~H-~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKH-IKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSS-TTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHH-HHHHccCCCC
Confidence            56666666666666666666 4556665553

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.11  E-value=2e-06  Score=42.60  Aligned_cols=24  Identities=29%  Similarity=0.747  Sum_probs=9.6

Q ss_pred             ccccccccccCCHHHHHHhHHHhc
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKTHT   90 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~   90 (230)
                      |.|..|++.|.....|..|+++|+
T Consensus         4 ~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            4 YQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             EECTTTCCEESCHHHHHHHHHTTC
T ss_pred             ccCCCCCcccCCHHHHHHHHHHhc
Confidence            334444444444444444443333

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.09  E-value=2.4e-06  Score=42.00  Aligned_cols=26  Identities=38%  Similarity=0.798  Sum_probs=16.9

Q ss_pred             cccccccccccCChHHHHHHHHhhcCC
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      ||.|+.|++.|...+.|..| ...|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H-~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRH-YRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHH-HHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHH-HHHhcC
Confidence            56777777777777777777 344543

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.09  E-value=1.5e-06  Score=42.30  Aligned_cols=24  Identities=13%  Similarity=0.403  Sum_probs=12.9

Q ss_pred             CcccccccccccCChHHHHHhHhc
Q psy14799         34 KSFQCDECDMSFGTHQALGRHKQC   57 (230)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~   57 (230)
                      +||.|+.|++.|.....|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            445555555555555555555544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.09  E-value=2e-06  Score=42.26  Aligned_cols=26  Identities=31%  Similarity=0.830  Sum_probs=13.3

Q ss_pred             cccccccccccCCHHHHHHhHHHhcC
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~   91 (230)
                      +|.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            34555555555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.08  E-value=1.8e-06  Score=42.19  Aligned_cols=25  Identities=16%  Similarity=0.587  Sum_probs=13.0

Q ss_pred             CcccccccccccCChHHHHHhHhcc
Q psy14799         34 KSFQCDECDMSFGTHQALGRHKQCK   58 (230)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~   58 (230)
                      +||.|+.|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.07  E-value=1.3e-06  Score=43.14  Aligned_cols=21  Identities=33%  Similarity=0.581  Sum_probs=7.8

Q ss_pred             ccccccccccCChHHHHHhHh
Q psy14799         36 FQCDECDMSFGTHQALGRHKQ   56 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~   56 (230)
                      |.|+.|++.|.....|..|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHIL   23 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHT
T ss_pred             ccCCCCCchhCCHHHHHHHHH
Confidence            333333333333333333333

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.07  E-value=6.9e-07  Score=45.58  Aligned_cols=26  Identities=12%  Similarity=-0.047  Sum_probs=23.4

Q ss_pred             CCccccccccCCccccccccccCCCC
Q psy14799        178 GGICGSMWRVETWHPCHLLTERNRQP  203 (230)
Q Consensus       178 ~~~C~~~f~~~~~l~~H~~~h~~~~~  203 (230)
                      |++||+.|.....|..|+++|.+++|
T Consensus         5 C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            5 CPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             SSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCcccCCHHHHHHHHHHHccCCC
Confidence            35999999999999999999988864

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.07  E-value=1.8e-06  Score=41.88  Aligned_cols=24  Identities=46%  Similarity=0.902  Sum_probs=12.2

Q ss_pred             cccccccccccCCHHHHHHhHHHh
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTH   89 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h   89 (230)
                      +|.|+.|++.|.....|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHc
Confidence            455555555555555555555444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.06  E-value=1.9e-06  Score=42.43  Aligned_cols=27  Identities=33%  Similarity=0.727  Sum_probs=17.6

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      +||.|+.|++.|...+.|..| ...|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H-~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLH-ILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHH-HTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHH-HHHhcC
Confidence            356777777777777777777 444543

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.04  E-value=2.5e-06  Score=42.26  Aligned_cols=25  Identities=36%  Similarity=0.712  Sum_probs=10.7

Q ss_pred             ccccccccccCCHHHHHHhHHHhcC
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~   91 (230)
                      |.|+.|++.|.....|..|+++|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHcc
Confidence            3444444444444444444444433

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.03  E-value=3.5e-06  Score=40.81  Aligned_cols=21  Identities=29%  Similarity=0.566  Sum_probs=14.5

Q ss_pred             CcccccccccccCChHHHHHH
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H  142 (230)
                      +||.|+.|++.|...+.|..|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H   22 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKH   22 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHH
Confidence            466677777777777777777

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.03  E-value=3.2e-06  Score=41.30  Aligned_cols=21  Identities=33%  Similarity=0.828  Sum_probs=13.8

Q ss_pred             CcccccccccccCChHHHHHH
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H  142 (230)
                      +||.|+.|++.|...+.|..|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H   22 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETH   22 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHH
T ss_pred             cCccCCCCCcccCCHHHHHHH
Confidence            456666666666666666666

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.02  E-value=3.1e-06  Score=44.58  Aligned_cols=28  Identities=36%  Similarity=0.731  Sum_probs=15.4

Q ss_pred             Ccccccc--cccccCCHHHHHHhHHHhcCC
Q psy14799         65 RPFPCDL--CEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        65 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      ++|.|.+  |++.|.....|..|+++|+++
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4555553  555555555555555555543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.01  E-value=1.4e-05  Score=47.89  Aligned_cols=48  Identities=25%  Similarity=0.316  Sum_probs=29.8

Q ss_pred             ccccccCHHHHHHHHHhhcCCCC------ccccc--ccccccCChHHHHHHHHhhc
Q psy14799        100 CFQSFYSKADLVRHMKGRHLNIR------SFTCH--LCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       100 C~~~f~~~~~l~~H~~~~H~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~H  147 (230)
                      |++.|.+...|..|+...|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            66666666666666644554443      56675  47776666667777766554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.01  E-value=2.9e-06  Score=41.21  Aligned_cols=21  Identities=24%  Similarity=0.632  Sum_probs=14.1

Q ss_pred             CcccccccccccCChHHHHHH
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H  142 (230)
                      +||.|+.|++.|...+.|..|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H   22 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAH   22 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHH
T ss_pred             cCcCCCCCCcccCCHHHHHHH
Confidence            466666666666666666666

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.01  E-value=3.3e-06  Score=41.81  Aligned_cols=27  Identities=22%  Similarity=0.502  Sum_probs=18.4

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      ++|.|+.|++.|...+.|..|+ ..|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHI-KTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHH-HHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHH-HHHcc
Confidence            3577777777777777777774 34433

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.00  E-value=3.4e-06  Score=42.38  Aligned_cols=16  Identities=31%  Similarity=0.686  Sum_probs=5.8

Q ss_pred             cccccCCHHHHHHhHH
Q psy14799         72 CEQRFLNKSHLAYHVK   87 (230)
Q Consensus        72 C~~~f~~~~~l~~H~~   87 (230)
                      |++.|.....|..|++
T Consensus        10 C~k~f~~~~~L~~H~~   25 (31)
T 1sp2_A           10 CGKRFTRSDELQRHKR   25 (31)
T ss_dssp             CCCBCSSHHHHHHHHT
T ss_pred             CCcccCCHhHHHHHHH
Confidence            3333333333333333

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=2.2e-06  Score=42.07  Aligned_cols=25  Identities=28%  Similarity=0.652  Sum_probs=11.3

Q ss_pred             ccccccccccCCHHHHHHhHHHhcC
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~   91 (230)
                      |.|+.|++.|.....|..|+++|++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            3 HKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhcc
Confidence            4444444444444444444444443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.99  E-value=4e-06  Score=50.59  Aligned_cols=28  Identities=29%  Similarity=0.568  Sum_probs=15.8

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      +||.|..|++.|.....|..|+++|+++
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            4555555555555555555555555544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.99  E-value=5.5e-06  Score=41.86  Aligned_cols=28  Identities=32%  Similarity=0.648  Sum_probs=19.4

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhhcCCC
Q psy14799        122 RSFTCH--LCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       122 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      +||.|.  .|++.|...+.|..| +..|.++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H-~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRH-KKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHH-HGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHH-HHHccCC
Confidence            567777  677777777777777 4556543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.99  E-value=5.1e-06  Score=41.69  Aligned_cols=27  Identities=33%  Similarity=0.618  Sum_probs=16.6

Q ss_pred             ccccc--ccccccCChHHHHHHHHhhcCCC
Q psy14799        123 SFTCH--LCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       123 ~~~C~--~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      ||.|+  .|++.|...+.|..| ...|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H-~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRH-KRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHH-HTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHH-HHHhcCC
Confidence            56665  666666666666666 4445443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.98  E-value=2.8e-06  Score=41.71  Aligned_cols=25  Identities=40%  Similarity=0.709  Sum_probs=15.3

Q ss_pred             cccccccccccCChHHHHHHHHhhcC
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      ||.|++|++.|...+.|..| ...|.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H-~~~H~   26 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRH-LRIHS   26 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHH-HHHHH
T ss_pred             CccCCCCCCccCChhHHHHH-HHHhc
Confidence            56666666666666666666 34443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.23  E-value=9.1e-07  Score=43.76  Aligned_cols=23  Identities=35%  Similarity=0.712  Sum_probs=9.3

Q ss_pred             ccccccccccCCHHHHHHhHHHh
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKTH   89 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h   89 (230)
                      |.|+.|++.|.....|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            33444444444444444444333

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.96  E-value=5.7e-06  Score=49.89  Aligned_cols=33  Identities=24%  Similarity=0.321  Sum_probs=25.0

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      .+..++||.|.+|++.|...+.|.+| ++.|+++
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H-~r~Htg~   39 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQH-EAQHGVT   39 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHH-HHHHTTT
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhh-hhhhCCC
Confidence            35677888888888888888888888 5556554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.96  E-value=5.5e-06  Score=39.96  Aligned_cols=25  Identities=36%  Similarity=0.801  Sum_probs=15.6

Q ss_pred             cccccccccccCChHHHHHHHHhhcC
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      ||.|+.|++.|...+.|..| ...|.
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H-~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRH-QRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHH-GGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHH-HHHcC
Confidence            46677777777777777777 44454

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.95  E-value=5e-06  Score=40.12  Aligned_cols=23  Identities=35%  Similarity=0.806  Sum_probs=12.1

Q ss_pred             ccccccccccCChHHHHHhHhcc
Q psy14799         36 FQCDECDMSFGTHQALGRHKQCK   58 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~   58 (230)
                      |.|+.|++.|.....|..|+++|
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVH   24 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHc
Confidence            45555555555555555555544

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=6e-07  Score=50.34  Aligned_cols=33  Identities=24%  Similarity=0.626  Sum_probs=23.7

Q ss_pred             hcCCCCccccc--ccccccCChHHHHHHHHhhcCCC
Q psy14799        117 RHLNIRSFTCH--LCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       117 ~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      .|.+++||.|+  .|++.|...+.|.+| ...|.++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H-~~~H~~e   46 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSH-IQTHLED   46 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHH-HHHHTTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHH-HHHccCC
Confidence            57777788884  588888888888888 4556554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.94  E-value=3.3e-06  Score=41.43  Aligned_cols=27  Identities=37%  Similarity=0.736  Sum_probs=18.7

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      +||.|+.|++.|...+.|..| ...|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H-~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAH-LKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHH-HHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHH-HHHhcc
Confidence            467777788888777777777 344543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.17  E-value=1.3e-06  Score=43.21  Aligned_cols=26  Identities=31%  Similarity=0.588  Sum_probs=17.0

Q ss_pred             cccccccccccCChHHHHHHHHhhcCC
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      ||.|+.|++.|...+.|..| ...|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H-~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAH-VRQHTG   27 (29)
Confidence            56777777777777777777 344543

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.91  E-value=5.1e-06  Score=41.99  Aligned_cols=16  Identities=44%  Similarity=0.758  Sum_probs=6.2

Q ss_pred             cccccCChHHHHHhHh
Q psy14799         41 CDMSFGTHQALGRHKQ   56 (230)
Q Consensus        41 C~~~f~~~~~l~~H~~   56 (230)
                      |++.|.....|..|++
T Consensus        11 C~k~f~~~~~L~~H~~   26 (32)
T 1zfd_A           11 CDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             CCCCBSSSHHHHHHHG
T ss_pred             CCCccCCHHHHHHHHH
Confidence            3333333333333333

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.91  E-value=5.8e-07  Score=50.39  Aligned_cols=33  Identities=24%  Similarity=0.409  Sum_probs=17.3

Q ss_pred             HhhcCCCccccc--ccccccCChHHHHHhHhccCC
Q psy14799         28 TTVHGDKSFQCD--ECDMSFGTHQALGRHKQCKHM   60 (230)
Q Consensus        28 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~   60 (230)
                      ..|.+++||.|+  .|++.|...+.|..|+++|.+
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            345555555553  455555555555555555443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.14  E-value=1.5e-06  Score=43.22  Aligned_cols=25  Identities=36%  Similarity=0.825  Sum_probs=10.5

Q ss_pred             cccccccccccCCHHHHHHhHHHhc
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHT   90 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~   90 (230)
                      +|.|+.|++.|.....|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            3444444444444444444444433

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.11  E-value=1.7e-06  Score=43.00  Aligned_cols=27  Identities=26%  Similarity=0.630  Sum_probs=17.3

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      +||.|+.|++.|...+.|..| ...|.+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H-~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRH-VRIHTG   28 (30)
Confidence            466777777777777777777 344443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.07  E-value=2.1e-06  Score=41.24  Aligned_cols=23  Identities=22%  Similarity=0.595  Sum_probs=10.8

Q ss_pred             cccccccccccCChHHHHHhHhc
Q psy14799         35 SFQCDECDMSFGTHQALGRHKQC   57 (230)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~   57 (230)
                      ||.|+.|++.|.....|..|+++
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            34444444444444444444443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.01  E-value=2.8e-06  Score=40.77  Aligned_cols=24  Identities=42%  Similarity=1.045  Sum_probs=13.3

Q ss_pred             cccccccccccCCHHHHHHhHHHh
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTH   89 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h   89 (230)
                      ||.|+.|++.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555555544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.79  E-value=6.1e-06  Score=40.89  Aligned_cols=19  Identities=32%  Similarity=0.754  Sum_probs=8.1

Q ss_pred             ccccccccccCChHHHHHh
Q psy14799         36 FQCDECDMSFGTHQALGRH   54 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H   54 (230)
                      |.|+.|++.|.....|..|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHH
T ss_pred             cCCcccCcccCChHHHHHH
Confidence            4444444444444444444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.77  E-value=6e-05  Score=45.08  Aligned_cols=45  Identities=20%  Similarity=0.325  Sum_probs=26.6

Q ss_pred             cccccCCHHHHHHhHH-HhcCCC------ceecc--cccccccCHHHHHHHHHh
Q psy14799         72 CEQRFLNKSHLAYHVK-THTGER------DVTCG--LCFQSFYSKADLVRHMKG  116 (230)
Q Consensus        72 C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~  116 (230)
                      |++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            5566666666666653 454433      56665  466666666666666663

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.63  E-value=2.6e-05  Score=38.05  Aligned_cols=15  Identities=40%  Similarity=0.826  Sum_probs=5.4

Q ss_pred             ccccccCChHHHHHh
Q psy14799         40 ECDMSFGTHQALGRH   54 (230)
Q Consensus        40 ~C~~~f~~~~~l~~H   54 (230)
                      .|++.|.....|..|
T Consensus         9 ~C~k~f~~~~~l~~H   23 (29)
T 2ab3_A            9 NCGRSFNDRRKLNRH   23 (29)
T ss_dssp             TTCEEESSHHHHHHH
T ss_pred             cCcCccCCHHHHHHH
Confidence            333333333333333

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.62  E-value=3.5e-05  Score=37.54  Aligned_cols=24  Identities=33%  Similarity=0.755  Sum_probs=15.2

Q ss_pred             ccccc--ccccccCChHHHHHHHHhhc
Q psy14799        123 SFTCH--LCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       123 ~~~C~--~C~~~f~~~~~l~~H~~~~H  147 (230)
                      +|.|+  .|++.|...+.|..| +..|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H-~~~H   27 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRH-KKIH   27 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHH-HGGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHH-HHHh
Confidence            56666  666666666666666 3444

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.53  E-value=0.0035  Score=42.82  Aligned_cols=75  Identities=19%  Similarity=0.288  Sum_probs=49.4

Q ss_pred             CcccccccccccCCHHHHHHhH--HHhcCC-Cceecccc------cccccCHHHHHHHHHhhcCCCCcccccccccccCC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHV--KTHTGE-RDVTCGLC------FQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFR  135 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~C------~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~  135 (230)
                      +++.|.+|+..|.+...+..|.  +.|... +.+.+...      +..+....    +.. .+.....|.|.+|++.|.+
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEI-SDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCC-SSCCCTTTEETTTTEECSS
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----ccc-ccCCCCCeEcCCCCCEeCC
Confidence            5789999999999999999998  455321 12222100      11221110    111 3456677999999999999


Q ss_pred             hHHHHHHHH
Q psy14799        136 KSYLKVHLL  144 (230)
Q Consensus       136 ~~~l~~H~~  144 (230)
                      ...|..|+.
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999964

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.51  E-value=0.0038  Score=42.64  Aligned_cols=76  Identities=17%  Similarity=0.208  Sum_probs=48.9

Q ss_pred             CcccccccccccCChHHHHHhHh--ccCCCCCCCcccccc------cccccCCHHHHHHhHHHhcCCCceeccccccccc
Q psy14799         34 KSFQCDECDMSFGTHQALGRHKQ--CKHMDISLRPFPCDL------CEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFY  105 (230)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~--~~~~~~~~~~~~C~~------C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  105 (230)
                      +++.|..|+..|.+...+..|..  .|....  +.+.+..      =+..+...    .+.....+...|.|..|+..|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~~f~  104 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKV--RRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNMTFS  104 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHH--HHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTEECS
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHH--HHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCCEeC
Confidence            57899999999999999999983  221110  1111110      01112111    0112344567799999999999


Q ss_pred             CHHHHHHHHH
Q psy14799        106 SKADLVRHMK  115 (230)
Q Consensus       106 ~~~~l~~H~~  115 (230)
                      +...+..|..
T Consensus       105 s~~~~~~H~~  114 (127)
T 1zu1_A          105 SPVVAESHYI  114 (127)
T ss_dssp             SHHHHHHHHT
T ss_pred             CHHHHHHHHC
Confidence            9999999986

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.28  E-value=0.00098  Score=44.99  Aligned_cols=29  Identities=21%  Similarity=0.331  Sum_probs=24.0

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHh
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLT  145 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  145 (230)
                      .|+|+++|.|..|++.|.+.+.|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            67788888999999999999888888543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.13  E-value=0.0015  Score=44.08  Aligned_cols=27  Identities=22%  Similarity=0.367  Sum_probs=16.8

Q ss_pred             hcCCCcccccccccccCChHHHHHhHh
Q psy14799         30 VHGDKSFQCDECDMSFGTHQALGRHKQ   56 (230)
Q Consensus        30 h~~~~~~~C~~C~~~f~~~~~l~~H~~   56 (230)
                      ++|+++|.|..|++.|.+...|..|++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHh
Confidence            445566666666666666666666654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.99  E-value=0.0062  Score=30.95  Aligned_cols=27  Identities=26%  Similarity=0.386  Sum_probs=21.1

Q ss_pred             cccccccccccCChHHHHHHHHhhcCC
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      .|.||+|.+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            477888888888888888887777754

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.79  E-value=0.0067  Score=32.96  Aligned_cols=20  Identities=30%  Similarity=0.456  Sum_probs=10.5

Q ss_pred             cccccccccccCChHHHHHH
Q psy14799        123 SFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H  142 (230)
                      +|.|+.|+..|.....|+.|
T Consensus        12 ~~~CPrCn~~f~~~~sLr~H   31 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGH   31 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhh
Confidence            34555555555555555555

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.78  E-value=0.0056  Score=33.26  Aligned_cols=22  Identities=23%  Similarity=0.332  Sum_probs=12.5

Q ss_pred             cccccccccccCCHHHHHHhHH
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVK   87 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~   87 (230)
                      +|.|+.|+..|.....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4555555555555555555555

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.63  E-value=0.034  Score=28.20  Aligned_cols=26  Identities=27%  Similarity=0.524  Sum_probs=17.8

Q ss_pred             eecccccccccCHHHHHHHHHhhcCC
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRHLN  120 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (230)
                      |.|++|.+.|.+...|..|....|..
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            66777777777777777777656643

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.08  E-value=0.039  Score=39.48  Aligned_cols=104  Identities=17%  Similarity=0.235  Sum_probs=69.8

Q ss_pred             cccccccccCChH-----HHHHhHhccCCCCCCCccccc--ccccccCCHHHHHHhHHHhcCCCceecccccccccCHHH
Q psy14799         37 QCDECDMSFGTHQ-----ALGRHKQCKHMDISLRPFPCD--LCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKAD  109 (230)
Q Consensus        37 ~C~~C~~~f~~~~-----~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  109 (230)
                      .|+.|...+....     .+.+-+.    .   ....|+  -|+.... ...+..|.. .-.-.+..|+.|+..+ ....
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~----~---l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~  124 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL----S---LMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFH  124 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH----T---SEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGG
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh----h---cccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHH
Confidence            7999987766531     1222222    1   346674  5777665 446778863 3345678999999887 4578


Q ss_pred             HHHHHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCCChh
Q psy14799        110 LVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADE  153 (230)
Q Consensus       110 l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  153 (230)
                      |..|.. ..-..++..|+.|+..+.. ..|..| ...+.+..++
T Consensus       125 l~~H~~-~~C~~r~~~C~~C~~~~~~-~~l~~H-~~~~~~~~~~  165 (170)
T 3hcs_A          125 INIHIL-KDCPRRQVSCDNCAASMAF-EDKEIH-DQNCPLALEH  165 (170)
T ss_dssp             HHHHHH-HTCTTCEEECTTTCCEEEG-GGHHHH-HTTCCC----
T ss_pred             HHHHhh-hhCCCCCeECCCCCCccCH-HHHHhH-HHhCcChhhh
Confidence            999987 5667778899999988865 488999 7777776654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.87  E-value=0.046  Score=39.08  Aligned_cols=96  Identities=18%  Similarity=0.366  Sum_probs=58.4

Q ss_pred             ccccccccccCCH-----HHHHHhHHHhcCCCceec--ccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHH
Q psy14799         67 FPCDLCEQRFLNK-----SHLAYHVKTHTGERDVTC--GLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYL  139 (230)
Q Consensus        67 ~~C~~C~~~f~~~-----~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l  139 (230)
                      ..|+.|...+...     ..+.+-+.    +....|  ..|+.... ...+..|..  .-.-.+..|+.|+..+ ....|
T Consensus        54 ~~CP~Cr~~~~~~~~~~~~~~~~~i~----~l~v~C~n~GC~~~~~-~~~l~~H~~--~C~~~~v~C~~C~~~~-~r~~l  125 (170)
T 3hcs_A           54 HKCPVDNEILLENQLFPDNFAKREIL----SLMVKCPNEGCLHKME-LRHLEDHQA--HCEFALMDCPQCQRPF-QKFHI  125 (170)
T ss_dssp             SBCTTTCCBCCGGGCEECHHHHHHHH----TSEEECCSTTCCCEEE-GGGHHHHHT--TCTTSEEECTTTCCEE-EGGGH
T ss_pred             CCCCCCccCcchhhhhhhHHHHHHHh----hcccCCCCCCCCceec-HhHHHHHHh--cCCceeeECCCCChHH-HHHHH
Confidence            3899998766542     11222221    345677  45776655 467888874  3344678899999888 56688


Q ss_pred             HHHHHhhcCCCChhhhhhccCCCCCCCCCccccccccc
Q psy14799        140 KVHLLTIHMQPADEAQNAIHRCYACRCAGHCLQIGTHS  177 (230)
Q Consensus       140 ~~H~~~~H~~~~~~~c~~~~~C~~c~~~~~~~~~~~h~  177 (230)
                      ..|+.. .-..+..      .|..|+..+....+..|.
T Consensus       126 ~~H~~~-~C~~r~~------~C~~C~~~~~~~~l~~H~  156 (170)
T 3hcs_A          126 NIHILK-DCPRRQV------SCDNCAASMAFEDKEIHD  156 (170)
T ss_dssp             HHHHHH-TCTTCEE------ECTTTCCEEEGGGHHHHH
T ss_pred             HHHhhh-hCCCCCe------ECCCCCCccCHHHHHhHH
Confidence            999432 2222222      377888777666555554

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=92.15  E-value=0.11  Score=25.52  Aligned_cols=25  Identities=24%  Similarity=0.449  Sum_probs=20.4

Q ss_pred             ccccccccccCChHHHHHHHHhhcC
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      -.|..|.+.|.+..+|..|++..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4588888888888888888887774

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=88.69  E-value=0.34  Score=23.74  Aligned_cols=23  Identities=22%  Similarity=0.758  Sum_probs=16.9

Q ss_pred             ecccccccccCHHHHHHHHHhhc
Q psy14799         96 TCGLCFQSFYSKADLVRHMKGRH  118 (230)
Q Consensus        96 ~C~~C~~~f~~~~~l~~H~~~~H  118 (230)
                      .|..|.+.+.+..+|..|++..|
T Consensus        11 hcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc
Confidence            47777777777777777777555

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=86.89  E-value=0.33  Score=29.56  Aligned_cols=38  Identities=26%  Similarity=0.585  Sum_probs=16.2

Q ss_pred             eecccccccccCHHHHHHHHHhhcCCCCcccccccccccC
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFF  134 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~  134 (230)
                      |.|..|+.++.- ..+..|.. .-.+...|.|-.|++.|.
T Consensus        11 F~C~~Cgd~lKK-~kv~~H~~-~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVKK-IQVEKHVS-NCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEET-THHHHHHH-HCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeeec-ccchhHHh-hCCCCCcEEecccCCeeC
Confidence            444444444432 33444443 222223344555555554

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=86.68  E-value=1  Score=22.87  Aligned_cols=19  Identities=21%  Similarity=0.347  Sum_probs=7.8

Q ss_pred             ccccccccccCCHHHHHHh
Q psy14799         67 FPCDLCEQRFLNKSHLAYH   85 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H   85 (230)
                      +.|..|+..|.+...+..|
T Consensus         9 ~~C~~C~IsF~~l~ty~aH   27 (36)
T 1fu9_A            9 KYCSTCDISFNYVKTYLAH   27 (36)
T ss_dssp             SEETTTTEECSSHHHHHHH
T ss_pred             CeeccccceehhhHHHhhh
Confidence            3344444444444444443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=86.32  E-value=0.57  Score=23.80  Aligned_cols=24  Identities=33%  Similarity=0.502  Sum_probs=20.4

Q ss_pred             CCcccccccccccCChHHHHHhHh
Q psy14799         33 DKSFQCDECDMSFGTHQALGRHKQ   56 (230)
Q Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~   56 (230)
                      ...+.|..|+.+|.+...+..|.+
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhe
Confidence            346789999999999999999976

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=86.01  E-value=0.45  Score=29.00  Aligned_cols=47  Identities=21%  Similarity=0.436  Sum_probs=34.8

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHH
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRH  113 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  113 (230)
                      ..|.|..||..+... .|..|...-.+...|.|..|++.|.. ..++.|
T Consensus         9 V~F~C~~Cgd~lKK~-kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A            9 VFFTCNACGESVKKI-QVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             CEEEESSSCCEEETT-HHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             eEEEcCCCCCeeecc-cchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            458899999887754 58888766666567899999999975 445544

>3f2k_A Histone-lysine N-methyltransferase setmar; histone-lysine N-methyltransferase setmar, SET domain and mariner transposase fusion; 1.85A {Homo sapiens} PDB: 3k9k_A 3k9j_A

Probab=83.82  E-value=0.39  Score=35.91  Aligned_cols=28  Identities=39%  Similarity=0.796  Sum_probs=24.7

Q ss_pred             CCCCCCCCCCchhHHhHHHhhhhhccCC
Q psy14799        201 RQPPYSQDLSPCDIFLLQKLKNQLNGRH  228 (230)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (230)
                      ..|||+||++|.||.++..+++.+.++.
T Consensus       153 ~~P~ySPdlnpie~~~w~~lk~~l~~~~  180 (226)
T 3f2k_A          153 PHPPYSPDLLPTNYHVFKHLNNFLQGKR  180 (226)
T ss_dssp             CCCTTCGGGCHHHHTHHHHHHHHHTTCB
T ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHhcC
Confidence            4699999999999999999998887764

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=82.28  E-value=0.96  Score=25.24  Aligned_cols=47  Identities=26%  Similarity=0.251  Sum_probs=28.6

Q ss_pred             hhhhhhhhhhhhhccCHHHHHHHHHhhcCCCcccccccc-cccCChHHHHHhHh
Q psy14799          4 SFILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCDECD-MSFGTHQALGRHKQ   56 (230)
Q Consensus         4 ~~~c~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~-~~f~~~~~l~~H~~   56 (230)
                      +++|++   |...-.+..+|..|..+-..   -+|+.|- ....+.+.|+.|.+
T Consensus         3 smvC~~---C~~ECET~kEl~~H~~sCp~---gqCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            3 SMVCDV---CHHECETAKELESHRQSCIN---GQCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             TTBCTT---TCCBCSSTTTHHHHHHHHTT---TBCTTTCCBCCSSHHHHHHHHT
T ss_pred             cchhhH---HHhhhhhHHHHHHHhccCCC---CCCCcccCcCCcCHHHHHHHHH
Confidence            456666   33366777777777776543   2466664 33555667777764

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=81.83  E-value=1.3  Score=21.23  Aligned_cols=21  Identities=19%  Similarity=0.232  Sum_probs=11.0

Q ss_pred             eecccccccccCHHHHHHHHH
Q psy14799         95 VTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      +.|++|.....+...|..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            455555555555555555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	230
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	9e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.003
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d2epqa1	32	g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [	6e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.001
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.003
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.003
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.003

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.1 bits (92), Expect = 9e-06
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGER 93
          R F C++C + F  + HL  H ++HT E+
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 3e-05
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGE 92
          +P+ C  C + F   S L  H + HTGE
Sbjct: 6  KPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 4e-05
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGER 93
          + F C  C +RF+   HL+ H+KTH  ++
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 1e-04
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 65  RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK 115
           + +PC  C + F +KS    H+  H G R   CG+C + F  K  LV HMK
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 2e-04
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 33 DKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTH 89
          DK + C +C  SF       RH          RP+ C +C ++F  K HL  H+K H
Sbjct: 1  DKLYPC-QCGKSFTHKSQRDRHMSMHLGL---RPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 1e-04
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVK-THTGERDVTC 97
          +P+ C  C + F    HL  H+K  HT ER   C
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 2e-04
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 65 RPFPCDL--CEQRFLNKSHLAYHVKTHTGER 93
          RPF C    C +RF     L  H +THTGE+
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.9 bits (81), Expect = 3e-04
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTG 91
          +PF C +C + F    HL  H++THTG
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 3e-04
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGE 92
          R + CD C + F + S L+ H +THTGE
Sbjct: 11 RRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (74), Expect = 0.003
 Identities = 8/33 (24%), Positives = 12/33 (36%)

Query: 83  AYHVKTHTGERDVTCGLCFQSFYSKADLVRHMK 115
                     R   C  C +SF   +DL +H +
Sbjct: 1   GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 6e-04
 Identities = 8/28 (28%), Positives = 13/28 (46%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTGE 92
          +P+ C  C++ F  K  L  H K +   
Sbjct: 7  KPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.002
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 87  KTHTGERDVTCGLCFQSFYSKADLVRHMK 115
           +THTGE+   C  C ++F  K  L  H K
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFK 29

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (78), Expect = 6e-04
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 65 RPFPCDLCEQRFLNKSHLAYHVKTHTG 91
          +P+ C +C  RF  K  ++YHV++H G
Sbjct: 2  KPYSCPVCGLRFKRKDRMSYHVRSHDG 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 65 RPFPCD--LCEQRFLNKSHLAYHVKTHTGE 92
          +P  C    C + +    +L  H+++HTGE
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.003
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 87  KTHTGERDVTCGLCFQSFYSKADLVRHMKGRH 118
           +TH+GE+   C +C   F     +  H+  +H
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.4 bits (74), Expect = 0.003
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 85  HVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNI 121
             +  TG +   C  C +SF     L  H K RH+ +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RHMLV 37

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (74), Expect = 0.003
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 68 PCDLCEQRFLNKSHLAYHVKTHTGERDVTC 97
          P   C + F  K HL  H+K H+  RD  C
Sbjct: 5  PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 31.9 bits (73), Expect = 0.003
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 65 RPFPCD--LCEQRFLNKSHLAYHVKTHTGE 92
          RP+ CD   C++ F+    L  H K+H  +
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	230
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.58
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.57
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.24
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.22
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.1
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.07
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.06
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.05
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.99
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.94
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.93
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.93
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.9
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.86
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.86
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.83
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.83
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.83
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.81
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.8
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.66
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.64
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.59
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.56
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.55
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.54
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.46
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.45
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.41
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.4
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.32
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.27
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.26
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.24
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.22
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.17
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.15
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.09
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.06
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.02
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.02
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.0
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.0
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.9
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.88
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.86
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.85
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.8
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.75
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.73
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.6
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.46
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.37
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.35
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.35
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.35
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.31
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.28
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.27
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.25
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.25
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.24
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.23
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.2
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.19
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.14
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.13
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.12
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.04
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.03
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.93
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.91
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.9
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.86
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.79
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.78
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.68
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.6
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.56
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.5
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.35
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.33
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.33
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.16
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.12
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.91
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.67
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.42
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.34
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.28
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.28
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.12
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.06
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.74
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.68
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.15
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.0
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.93
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.9
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.64
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.07
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.61
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.56
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.37
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.1
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.12
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	90.96
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.12
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.09
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.16
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.81
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.4
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	86.94
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	86.29
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	84.54
d1fu9a_	36	U-shaped transcription factor, different fingers {	83.63
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.35
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	82.77

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=8.1e-16  Score=88.51  Aligned_cols=49  Identities=37%  Similarity=0.649  Sum_probs=29.0

Q ss_pred             CCceecccccccccCHHHHHHHHHhhcCCCCcccccccccccCChHHHHHH
Q psy14799         92 ERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus        92 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H  142 (230)
                      |++|.|. ||+.|.....|..|++ .|++++||.|++||++|...+.|.+|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~-~Ht~ekpy~C~~C~k~F~~~~~L~~H   49 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGH   49 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHH
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhh-ccccccCCcCCCcCCEecCHHHHHHH
Confidence            3555663 6666666666666655 56666666666666666666666666

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.1e-15  Score=87.98  Aligned_cols=52  Identities=40%  Similarity=0.764  Sum_probs=44.1

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCCCceecccccccccCHHHHHHHHHhhc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRH  118 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (230)
                      +||.| .||+.|.....|..|+++|++++||.|.+|++.|...+.|..|++ .|
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r-~H   53 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IH   53 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT-TT
T ss_pred             cCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh-cC
Confidence            68888 488888888888888888888888888888888888888888887 54

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.6e-12  Score=68.19  Aligned_cols=35  Identities=26%  Similarity=0.522  Sum_probs=20.6

Q ss_pred             CCcccccccccccCChHHHHHHHHhhcCCCChhhh
Q psy14799        121 IRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQ  155 (230)
Q Consensus       121 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~c  155 (230)
                      ++||.|.+||+.|...+.|.+|++.+|++++||.|
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            45566666666666666666665555666666554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=5.4e-12  Score=66.15  Aligned_cols=36  Identities=25%  Similarity=0.470  Sum_probs=19.2

Q ss_pred             CCceecccccccccCHHHHHHHHHhhcCCCCccccc
Q psy14799         92 ERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCH  127 (230)
Q Consensus        92 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  127 (230)
                      ++||+|..|++.|...+.|.+|++..|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            445555555555555555555554345555555554

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=5.8e-12  Score=66.13  Aligned_cols=35  Identities=23%  Similarity=0.508  Sum_probs=21.2

Q ss_pred             HHHhhcCCCcccccccccccCChHHHHHhHhccCC
Q psy14799         26 HITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHM   60 (230)
Q Consensus        26 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (230)
                      |+++|++++||+|++||++|...+.|.+|+++|.+
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            45556666666666666666666666666665554

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=4.3e-11  Score=61.71  Aligned_cols=34  Identities=24%  Similarity=0.611  Sum_probs=27.1

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      .|++++||.|++|++.|...++|++|+++.|.++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            6788888888888888888888888877777543

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=1.3e-11  Score=64.74  Aligned_cols=36  Identities=25%  Similarity=0.383  Sum_probs=22.2

Q ss_pred             HHHhhcCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy14799        113 HMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       113 H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      |++ .|++++||.|++||++|...++|.+| +.+|++|
T Consensus         3 H~~-~Ht~ekpy~C~~CgK~F~~~s~L~~H-~r~HtGE   38 (38)
T d2cota2           3 SEW-QQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGE   38 (38)
T ss_dssp             CCS-CCCCSCSSBCSSSCCBCSCHHHHHHH-HTTTCCS
T ss_pred             cCc-ccCCCCCEecCCCCceeeCHHHHHHh-CccCCCC
Confidence            344 56666666666666666666666666 5556543

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=4.6e-11  Score=60.06  Aligned_cols=31  Identities=32%  Similarity=0.581  Sum_probs=19.8

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhcCC
Q psy14799        118 HLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       118 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      |++++||.|.+||++|...+.|..| ++.|++
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H-~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQH-QRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHH-HHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhh-ccccCC
Confidence            5666666666666666666666666 555554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=2.2e-11  Score=63.38  Aligned_cols=34  Identities=32%  Similarity=0.585  Sum_probs=28.2

Q ss_pred             HHHhhcCCCcccccccccccCChHHHHHhHhccC
Q psy14799         26 HITTVHGDKSFQCDECDMSFGTHQALGRHKQCKH   59 (230)
Q Consensus        26 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   59 (230)
                      |.++|++|+||+|++|++.|..++.|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            5678888888888888888888888888888764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.1e-11  Score=61.92  Aligned_cols=34  Identities=32%  Similarity=0.581  Sum_probs=26.1

Q ss_pred             HhhcCCCcccccccccccCChHHHHHhHhccCCC
Q psy14799         28 TTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMD   61 (230)
Q Consensus        28 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   61 (230)
                      ++|+|++||+|.+|+++|...+.|..|+++|++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4677888888888888888888888888777654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.5e-10  Score=58.17  Aligned_cols=31  Identities=32%  Similarity=0.579  Sum_probs=19.6

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCC
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLN  120 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (230)
                      |++++||+|..|++.|...+.|..|++ .|++
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r-~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQR-VHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHH-GGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhcc-ccCC
Confidence            566666666666666666666666666 5654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=3.3e-10  Score=57.64  Aligned_cols=31  Identities=29%  Similarity=0.594  Sum_probs=20.2

Q ss_pred             cCCCCcccccccccccCChHHHHHHHHhhcCC
Q psy14799        118 HLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       118 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      |++++||.|.+|++.|...+.|.+| ++.|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H-~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARH-LKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHH-HGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHH-ccccCC
Confidence            4566667777777777776677776 455644

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=1.6e-10  Score=60.11  Aligned_cols=30  Identities=30%  Similarity=0.616  Sum_probs=20.4

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhc
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      .|++++||.|++|+++|...+.|.+| +..|
T Consensus         5 ~HTgeKPy~C~~C~k~F~~~~~L~~H-~r~H   34 (37)
T d1p7aa_           5 GSTGIKPFQCPDCDRSFSRSDHLALH-RKRH   34 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHH-HGGG
T ss_pred             ccCCccCeEeCCCCCEecCHHHHHHH-HhcC
Confidence            66677777777777777777777777 4555

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=3.9e-10  Score=58.12  Aligned_cols=31  Identities=26%  Similarity=0.572  Sum_probs=21.2

Q ss_pred             hcCCCCcccccccccccCChHHHHHHHHhhcC
Q psy14799        117 RHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       117 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      .|++++||.|.+|+++|...+.|..| +..|.
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H-~r~H~   32 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMH-FKRYH   32 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHH-HHHTT
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHh-CcccC
Confidence            56777777777777777777777777 34443

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=9e-11  Score=60.32  Aligned_cols=34  Identities=15%  Similarity=0.209  Sum_probs=27.3

Q ss_pred             hhhhhhhhhhhhccCHHHHHHHHHhhcCCCccccc
Q psy14799          5 FILDYWNKNYFFFLMGLKLEAHITTVHGDKSFQCD   39 (230)
Q Consensus         5 ~~c~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   39 (230)
                      |.|++ +.|+++|.+...|++|+++|++++||+|+
T Consensus         2 f~C~~-~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPE-PACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSC-TTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCC-CCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            44544 56888999999999999999999998886

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.3e-10  Score=58.95  Aligned_cols=33  Identities=27%  Similarity=0.620  Sum_probs=25.0

Q ss_pred             HhcCCCceecccccccccCHHHHHHHHHhhcCC
Q psy14799         88 THTGERDVTCGLCFQSFYSKADLVRHMKGRHLN  120 (230)
Q Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (230)
                      +|+|++||+|++|++.|...++|..|++..|..
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            577888888888888888888888887645544

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.90  E-value=4.4e-10  Score=54.75  Aligned_cols=27  Identities=37%  Similarity=0.877  Sum_probs=13.6

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCC
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      ||.|++|++.|...+.|..|+++|+|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            445555555555555555555555444

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.86  E-value=1e-09  Score=55.75  Aligned_cols=32  Identities=34%  Similarity=0.784  Sum_probs=20.7

Q ss_pred             hcCCCceecccccccccCHHHHHHHHHhhcCCC
Q psy14799         89 HTGERDVTCGLCFQSFYSKADLVRHMKGRHLNI  121 (230)
Q Consensus        89 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (230)
                      |+|++||+|.+|++.|...+.|.+|++ .|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r-~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG-GGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcc-ccCCc
Confidence            456666666666666666666666666 66543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.86  E-value=8.3e-10  Score=53.75  Aligned_cols=28  Identities=39%  Similarity=0.791  Sum_probs=17.5

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      +||.|++|++.|...+.|.+| +.+|+++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H-~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRH-YRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHH-HHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccc-cCcccCC
Confidence            456666666666666666666 5556554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=8.3e-10  Score=53.09  Aligned_cols=26  Identities=42%  Similarity=1.021  Sum_probs=13.5

Q ss_pred             CcccccccccccCCHHHHHHhHHHhc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHT   90 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~   90 (230)
                      +||.|++|++.|...+.|..|+++|+
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             cCccCCCCcCEecccccccccCCCcc
Confidence            44555555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=7.8e-10  Score=53.76  Aligned_cols=27  Identities=41%  Similarity=0.913  Sum_probs=14.0

Q ss_pred             cccccccccccCCHHHHHHhHHHhcCC
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      ||.|++|++.|...+.|..|+++|+|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            455555555555555555555555544

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=5.1e-10  Score=53.87  Aligned_cols=28  Identities=29%  Similarity=0.500  Sum_probs=25.0

Q ss_pred             CCcccccccccccCChHHHHHhHhccCC
Q psy14799         33 DKSFQCDECDMSFGTHQALGRHKQCKHM   60 (230)
Q Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (230)
                      |+||+|++|++.|...+.|.+|+++|.|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999998864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.1e-09  Score=56.17  Aligned_cols=32  Identities=41%  Similarity=0.770  Sum_probs=18.0

Q ss_pred             ccccc--cccccCCHHHHHHhHHHhcCCCceecc
Q psy14799         67 FPCDL--CEQRFLNKSHLAYHVKTHTGERDVTCG   98 (230)
Q Consensus        67 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (230)
                      |.|+.  |++.|.....|..|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            44544  555555555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.3e-09  Score=52.96  Aligned_cols=29  Identities=31%  Similarity=0.666  Sum_probs=20.3

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCC
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIHMQPA  151 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  151 (230)
                      +||.|++|++.|...+.|.+| +.+|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H-~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKH-IKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHH-HHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhh-cCccCCcC
Confidence            467777777777777777777 66666653

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=5.5e-09  Score=48.87  Aligned_cols=25  Identities=36%  Similarity=0.658  Sum_probs=19.7

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      +||.|.+||++|...+.|.+| +++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~H-qriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINH-QRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHH-HHHH
T ss_pred             CCccCCCCcCeeccCcccccC-ccCC
Confidence            578888888888888888888 5555

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=6.7e-09  Score=48.58  Aligned_cols=24  Identities=33%  Similarity=0.695  Sum_probs=9.8

Q ss_pred             cccccccccccCCHHHHHHhHHHh
Q psy14799         66 PFPCDLCEQRFLNKSHLAYHVKTH   89 (230)
Q Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h   89 (230)
                      ||.|.+||+.|...+.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            344444444444444444444433

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1.6e-08  Score=49.27  Aligned_cols=26  Identities=31%  Similarity=0.833  Sum_probs=13.4

Q ss_pred             cccccc--cccccCCHHHHHHhHHHhcC
Q psy14799         66 PFPCDL--CEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        66 ~~~C~~--C~~~f~~~~~l~~H~~~h~~   91 (230)
                      ||.|++  |++.|...+.|..|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            455544  55555555555555555554

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.7e-08  Score=49.31  Aligned_cols=27  Identities=44%  Similarity=0.942  Sum_probs=14.9

Q ss_pred             cccccc--cccccCCHHHHHHhHHHhcCC
Q psy14799         66 PFPCDL--CEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        66 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      ||.|++  |++.|...+.|..|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            455554  555555555555555555543

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=2.6e-08  Score=48.54  Aligned_cols=28  Identities=32%  Similarity=0.649  Sum_probs=18.4

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhcCCC
Q psy14799        122 RSFTCHL--CNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       122 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      +||.|++  |++.|...+.|++| ++.|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H-~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTH-LRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHH-HHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhh-cCcCcCC
Confidence            4667766  77777777777777 5666553

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.54  E-value=1.9e-09  Score=58.86  Aligned_cols=32  Identities=25%  Similarity=0.683  Sum_probs=14.9

Q ss_pred             cCCCCcccccc--cccccCChHHHHHHHHhhcCCC
Q psy14799        118 HLNIRSFTCHL--CNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       118 H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      |.+++||.|++  |++.|...+.|..| +.+|+++
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H-~r~Htge   46 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSH-IQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHH-HHHHTTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhh-cccccCC
Confidence            44444444443  44444444444444 4444443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.46  E-value=2e-08  Score=54.71  Aligned_cols=40  Identities=23%  Similarity=0.494  Sum_probs=35.2

Q ss_pred             HHHHhHHHhcCCCceeccc--ccccccCHHHHHHHHHhhcCCCC
Q psy14799         81 HLAYHVKTHTGERDVTCGL--CFQSFYSKADLVRHMKGRHLNIR  122 (230)
Q Consensus        81 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~  122 (230)
                      .|..|+. |.+++||.|.+  |++.|...+.|..|++ .|++++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r-~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHH-HHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcc-cccCCC
Confidence            3556774 99999999987  9999999999999999 999875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=3.3e-08  Score=48.22  Aligned_cols=27  Identities=33%  Similarity=0.721  Sum_probs=16.7

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhcCC
Q psy14799        122 RSFTCHL--CNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       122 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      +||.|++  |+++|...+.|.+| +++|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H-~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTH-VRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHH-HHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCcc-ccccCC
Confidence            4666655  66666666666666 445544

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=6.9e-08  Score=47.47  Aligned_cols=20  Identities=45%  Similarity=0.841  Sum_probs=8.3

Q ss_pred             cccccCCHHHHHHhHHHhcC
Q psy14799         72 CEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        72 C~~~f~~~~~l~~H~~~h~~   91 (230)
                      |++.|...+.|..|+++|+|
T Consensus        10 C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_          10 CGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCcCChhHhhhhcCcccc
Confidence            44444444444444444443

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=1e-07  Score=46.80  Aligned_cols=29  Identities=34%  Similarity=0.624  Sum_probs=18.0

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhhcCCCC
Q psy14799        122 RSFTCH--LCNKGFFRKSYLKVHLLTIHMQPA  151 (230)
Q Consensus       122 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~  151 (230)
                      +||.|+  .|++.|...+.|.+| +++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H-~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRH-KRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHH-HTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhh-cCcccccC
Confidence            466664  377777777777777 45566553

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.32  E-value=2.2e-07  Score=45.83  Aligned_cols=28  Identities=32%  Similarity=0.640  Sum_probs=20.4

Q ss_pred             CCcccccc--cccccCChHHHHHHHHhhcCC
Q psy14799        121 IRSFTCHL--CNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       121 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      ++||.|++  |++.|...+.|.+| +..|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H-~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRH-KKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHH-HGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHH-hhhccC
Confidence            46777877  88888888888888 666643

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.27  E-value=1.5e-07  Score=45.29  Aligned_cols=25  Identities=36%  Similarity=1.003  Sum_probs=11.7

Q ss_pred             cccccc--cccccCCHHHHHHhHHHhc
Q psy14799         66 PFPCDL--CEQRFLNKSHLAYHVKTHT   90 (230)
Q Consensus        66 ~~~C~~--C~~~f~~~~~l~~H~~~h~   90 (230)
                      ||.|++  |++.|.+.+.|..|+++|+
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccC
Confidence            444444  4444444444444444443

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.26  E-value=2.8e-07  Score=45.48  Aligned_cols=27  Identities=37%  Similarity=0.839  Sum_probs=15.7

Q ss_pred             CCcccccc--cccccCChHHHHHhHhccC
Q psy14799         33 DKSFQCDE--CDMSFGTHQALGRHKQCKH   59 (230)
Q Consensus        33 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~   59 (230)
                      |+||.|+.  |++.|...+.|.+|+++|.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            35566655  6666666666666665554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.24  E-value=1.5e-07  Score=45.36  Aligned_cols=26  Identities=35%  Similarity=0.843  Sum_probs=17.8

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhcC
Q psy14799        122 RSFTCHL--CNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       122 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~  148 (230)
                      +||.|++  |++.|...+.|.+| ++.|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H-~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRH-IRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHH-THHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhh-cCccC
Confidence            4677766  77777777777777 55553

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=6e-08  Score=46.23  Aligned_cols=21  Identities=24%  Similarity=0.311  Sum_probs=19.4

Q ss_pred             CccccccccCCcccccccccc
Q psy14799        179 GICGSMWRVETWHPCHLLTER  199 (230)
Q Consensus       179 ~~C~~~f~~~~~l~~H~~~h~  199 (230)
                      +.||+.|...++|++|+++|+
T Consensus         8 ~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           8 DGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             TTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCcCCCHHHHHHHHhhcc
Confidence            579999999999999999984

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=5.2e-07  Score=42.95  Aligned_cols=30  Identities=23%  Similarity=0.299  Sum_probs=21.1

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCChh
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLTIHMQPADE  153 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  153 (230)
                      ...|..||+.|.+...|.+| +..|++++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrh-klshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRH-KLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHH-GGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhh-hcccCCCCCC
Confidence            35677777777777777777 6777777765

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=3e-07  Score=43.72  Aligned_cols=25  Identities=40%  Similarity=0.873  Sum_probs=19.0

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhc
Q psy14799        122 RSFTCHL--CNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       122 ~~~~C~~--C~~~f~~~~~l~~H~~~~H  147 (230)
                      +||.|++  |++.|...++|++| ++.|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H-~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSH-ILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHH-HHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHH-Hhhc
Confidence            5788877  88888888888888 4544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=1.6e-06  Score=39.83  Aligned_cols=29  Identities=28%  Similarity=0.524  Sum_probs=25.1

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      +||.|..|.....++++|+.|+++.|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            58899999999999999999999888765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=6e-07  Score=42.75  Aligned_cols=27  Identities=19%  Similarity=0.162  Sum_probs=23.9

Q ss_pred             hhhhhhhccCHHHHHHHHHhhcCCCcc
Q psy14799         10 WNKNYFFFLMGLKLEAHITTVHGDKSF   36 (230)
Q Consensus        10 C~~C~~~f~~~~~l~~H~~~h~~~~~~   36 (230)
                      |..||+.|.+...|.+|..+|++|+||
T Consensus         8 ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           8 CEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             ETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            566888999999999999999999987

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.02  E-value=1.5e-06  Score=39.77  Aligned_cols=25  Identities=32%  Similarity=0.672  Sum_probs=13.3

Q ss_pred             CcccccccccccCChHHHHHhHhcc
Q psy14799         34 KSFQCDECDMSFGTHQALGRHKQCK   58 (230)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~   58 (230)
                      +||.|.+||+.|......++|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555555443

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=2e-06  Score=38.04  Aligned_cols=23  Identities=26%  Similarity=0.771  Sum_probs=12.0

Q ss_pred             ccccccccccCChHHHHHhHhcc
Q psy14799         36 FQCDECDMSFGTHQALGRHKQCK   58 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~   58 (230)
                      .+|+.|++-|+.+..|+.|++.|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGC
T ss_pred             CccchhhhHhcchhHHHHHhhcc
Confidence            34555555555555555555544

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.3e-06  Score=38.61  Aligned_cols=25  Identities=36%  Similarity=0.818  Sum_probs=15.7

Q ss_pred             ccccccccccCCHHHHHHhHHHhcC
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~   91 (230)
                      .+|+.|++.|..+..|..|++.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4566666666666666666666653

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=2.2e-06  Score=39.24  Aligned_cols=26  Identities=35%  Similarity=0.735  Sum_probs=18.1

Q ss_pred             CCcccccccccccCChHHHHHHHHhhc
Q psy14799        121 IRSFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       121 ~~~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      ++||.|.+||+.|..+.+.++| ..+|
T Consensus         1 EkPf~C~~CgrkFArsderkRH-~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRH-TKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHH-HGGG
T ss_pred             CCCcccchhhhhhhcchhhhhh-hhhc
Confidence            4677777777777777777777 4444

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=5.7e-06  Score=37.72  Aligned_cols=26  Identities=35%  Similarity=0.598  Sum_probs=19.4

Q ss_pred             ccccccccccCCHHHHHHhHHHhcCC
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      |.|+.||......+.|++|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            66777777777777777777777765

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=6.1e-06  Score=38.27  Aligned_cols=27  Identities=41%  Similarity=1.105  Sum_probs=17.3

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   91 (230)
                      +||.|++|+..|..+..+..|.+.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            566666666666666666666666654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=8.4e-07  Score=40.09  Aligned_cols=28  Identities=18%  Similarity=0.239  Sum_probs=25.1

Q ss_pred             ccccCCccccccccCCccccccccccCC
Q psy14799        174 GTHSGGICGSMWRVETWHPCHLLTERNR  201 (230)
Q Consensus       174 ~~h~~~~C~~~f~~~~~l~~H~~~h~~~  201 (230)
                      |.|.|..||+.|...+.|++|...|+|+
T Consensus         1 r~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           1 RVHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             CcchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            4577789999999999999999999875

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=5.2e-06  Score=38.54  Aligned_cols=26  Identities=35%  Similarity=0.809  Sum_probs=20.2

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhc
Q psy14799        122 RSFTCHL--CNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       122 ~~~~C~~--C~~~f~~~~~l~~H~~~~H  147 (230)
                      +||.|.+  |++++.+.++|+.|++..|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4778877  8888888888888877666

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=7.4e-06  Score=37.11  Aligned_cols=27  Identities=19%  Similarity=0.405  Sum_probs=15.8

Q ss_pred             CcccccccccccCChHHHHHhHhccCC
Q psy14799         34 KSFQCDECDMSFGTHQALGRHKQCKHM   60 (230)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (230)
                      +||+|..|...-.+.+.|..|++.|.+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            456666666655566666666655543

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=8.2e-06  Score=37.83  Aligned_cols=29  Identities=17%  Similarity=0.536  Sum_probs=25.8

Q ss_pred             CCcccccccccccCChHHHHHhHhccCCC
Q psy14799         33 DKSFQCDECDMSFGTHQALGRHKQCKHMD   61 (230)
Q Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   61 (230)
                      |+||.|++|...|..+..+.-|.+.|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57999999999999999999999988765

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=1.3e-05  Score=36.13  Aligned_cols=26  Identities=35%  Similarity=0.595  Sum_probs=18.4

Q ss_pred             ccccccccccCChHHHHHHHHhhcCCC
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      ..|.+||+.|..++.|++| +.+|+++
T Consensus         3 hvc~ecgkaf~essklkrh-~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRH-QLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHH-GGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHH-hhcccCC
Confidence            4577777777777777777 6666553

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=2.7e-05  Score=35.20  Aligned_cols=26  Identities=38%  Similarity=0.673  Sum_probs=13.5

Q ss_pred             CcccccccccccCChHHHHHHHHhhcC
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      +||+|..|...-.+++.|..| .+.|+
T Consensus         2 rpfkcqlcsy~srnssqltvh-lr~ht   27 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVH-LRSHT   27 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHH-HTTCC
T ss_pred             CcceeeecccccCCchheEEe-eeccc
Confidence            455555555555555555555 34443

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.46  E-value=3.5e-05  Score=36.02  Aligned_cols=27  Identities=37%  Similarity=0.762  Sum_probs=20.5

Q ss_pred             cccccccccccCChHHHHHHHHhhcCC
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      ||.|.+|++.|....-|.+|.+..|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            577888888888888888887777754

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.37  E-value=7e-05  Score=32.60  Aligned_cols=24  Identities=33%  Similarity=0.780  Sum_probs=18.5

Q ss_pred             ccccccccccCChHHHHHhHhccC
Q psy14799         36 FQCDECDMSFGTHQALGRHKQCKH   59 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~~   59 (230)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            578888888888888888887653

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00011  Score=33.39  Aligned_cols=26  Identities=19%  Similarity=0.381  Sum_probs=18.4

Q ss_pred             eecccccccccCHHHHHHHHHhhcCCC
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRHLNI  121 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (230)
                      |.|++|+.....++-|+.|++ .|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIR-sHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIR-THTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH-HTSSC
T ss_pred             ccccccCcccCCHHHHHHHHH-HhcCC
Confidence            567777777777777777777 66664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=7.9e-05  Score=34.03  Aligned_cols=27  Identities=22%  Similarity=0.411  Sum_probs=14.9

Q ss_pred             ceecccccccccCHHHHHHHHHhhcCC
Q psy14799         94 DVTCGLCFQSFYSKADLVRHMKGRHLN  120 (230)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (230)
                      ||.|..|.....+.++|+.|++..|..
T Consensus         2 py~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             Cccccccccccccchhhhhhhhccccc
Confidence            455555555555555555555544443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.35  E-value=9.3e-05  Score=32.20  Aligned_cols=23  Identities=39%  Similarity=0.882  Sum_probs=15.2

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      |+|..|.++|..++.|.+| +++|
T Consensus         1 ykcglcersfveksalsrh-qrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRH-QRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHH-GGGT
T ss_pred             CcccchHHHHHHHHHHHHH-HHhh
Confidence            4566676777776677766 5555

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=9.4e-05  Score=34.20  Aligned_cols=16  Identities=25%  Similarity=0.642  Sum_probs=6.1

Q ss_pred             ccccccCHHHHHHHHH
Q psy14799        100 CFQSFYSKADLVRHMK  115 (230)
Q Consensus       100 C~~~f~~~~~l~~H~~  115 (230)
                      |++.+.+.+.|+.|++
T Consensus        10 C~K~YtdPSSLRKH~k   25 (29)
T d2glia5          10 CTKRYTDPSSLRKHVK   25 (29)
T ss_dssp             TCCEESSHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHH
Confidence            3333333333333333

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.28  E-value=0.00015  Score=36.13  Aligned_cols=22  Identities=36%  Similarity=0.652  Sum_probs=10.6

Q ss_pred             ceecccccccccCHHHHHHHHH
Q psy14799         94 DVTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      .|+|.+|++.|.+..+|-.|++
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~   26 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMN   26 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCCCCCCCccCCcccccchHh
Confidence            3444444444444444444444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.0001  Score=33.55  Aligned_cols=27  Identities=30%  Similarity=0.531  Sum_probs=19.1

Q ss_pred             CcccccccccccCChHHHHHHHHhhcC
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      +||+|..|.......++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            467777777777777777777766663

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00014  Score=32.55  Aligned_cols=25  Identities=32%  Similarity=0.662  Sum_probs=16.2

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy14799        122 RSFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       122 ~~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      +||+|..|++.-.+.++|..| ++.|
T Consensus         2 kp~kck~cdyaaadsssl~kh-~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKH-LRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHH-HHHS
T ss_pred             CCcccccccchhcchhhHhhh-hhcc
Confidence            466666666666666666666 5554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=0.00015  Score=32.08  Aligned_cols=24  Identities=46%  Similarity=0.894  Sum_probs=12.4

Q ss_pred             ccccccccCCHHHHHHhHHHhcCC
Q psy14799         69 CDLCEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        69 C~~C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      |+.|.+.|.++.-|+.|-+.|+|+
T Consensus         3 cp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             CcchHHHHHHhHhhhhccccccCC
Confidence            455555555555555555555544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.00012  Score=36.72  Aligned_cols=23  Identities=26%  Similarity=0.816  Sum_probs=19.2

Q ss_pred             CCCcccccccccccCChHHHHHH
Q psy14799        120 NIRSFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus       120 ~~~~~~C~~C~~~f~~~~~l~~H  142 (230)
                      +.+||.|..|++.|....++.+|
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH   24 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRH   24 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHh
Confidence            56788888888888888888888

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00012  Score=33.27  Aligned_cols=23  Identities=30%  Similarity=0.654  Sum_probs=13.2

Q ss_pred             cccccccccccCChHHHHHHHHh
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLT  145 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~  145 (230)
                      ||.|..|...|.+..+|..|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            45566666666666666666443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00011  Score=32.92  Aligned_cols=25  Identities=24%  Similarity=0.674  Sum_probs=15.3

Q ss_pred             CcccccccccccCChHHHHHhHhcc
Q psy14799         34 KSFQCDECDMSFGTHQALGRHKQCK   58 (230)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~   58 (230)
                      +||+|..|+..-...++|..|+++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            4566666666666666666666654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.19  E-value=0.00015  Score=32.06  Aligned_cols=25  Identities=44%  Similarity=0.758  Sum_probs=13.8

Q ss_pred             cccccccccCChHHHHHHHHhhcCCC
Q psy14799        125 TCHLCNKGFFRKSYLKVHLLTIHMQP  150 (230)
Q Consensus       125 ~C~~C~~~f~~~~~l~~H~~~~H~~~  150 (230)
                      +|+.|.++|.++.-|+.| .+.|+++
T Consensus         2 qcp~c~k~f~skyylkvh-nr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVH-NRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHH-HHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhc-cccccCC
Confidence            355555555555555555 4555444

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.14  E-value=0.00018  Score=35.80  Aligned_cols=28  Identities=25%  Similarity=0.714  Sum_probs=19.2

Q ss_pred             CcccccccccccCCHHHHHHhHHHhcCC
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   92 (230)
                      +.|.|.+|++.|.+...|--|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4577777777777777777777766544

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.13  E-value=0.0002  Score=33.36  Aligned_cols=27  Identities=33%  Similarity=0.668  Sum_probs=21.1

Q ss_pred             ceecccccccccCHHHHHHHHHhhcCC
Q psy14799         94 DVTCGLCFQSFYSKADLVRHMKGRHLN  120 (230)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (230)
                      ||.|.+|++.|....-|.+|..+.|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            577888888888888888888777765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.12  E-value=0.00016  Score=32.73  Aligned_cols=25  Identities=36%  Similarity=0.627  Sum_probs=17.3

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhc
Q psy14799        122 RSFTCHL--CNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       122 ~~~~C~~--C~~~f~~~~~l~~H~~~~H  147 (230)
                      .||.|+.  |++.|...+.|++| ..+|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrh-ekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRH-EKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHH-HHHH
T ss_pred             CCccCCccCccccccCHHHHhhh-hhcc
Confidence            4677766  77777777777777 4443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.04  E-value=0.00024  Score=30.83  Aligned_cols=23  Identities=26%  Similarity=0.790  Sum_probs=14.1

Q ss_pred             cccccccccccCChHHHHHHHHh
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLT  145 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~  145 (230)
                      ||+|+.|...|..+.+|+.|+..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            56666666666666666666443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00012  Score=34.13  Aligned_cols=28  Identities=25%  Similarity=0.463  Sum_probs=20.5

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhcCC
Q psy14799        122 RSFTCHL--CNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       122 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      +||.|..  |.+.|++.++...|..+.|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4777877  888888888888885566653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00028  Score=32.02  Aligned_cols=21  Identities=33%  Similarity=0.771  Sum_probs=10.1

Q ss_pred             ccccccccccCCHHHHHHhHH
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVK   87 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~   87 (230)
                      |.|..|+..|.++.+|..||+
T Consensus         2 y~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             cccceeeeeEeeccchhHhhh
Confidence            444444444444444444444

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00039  Score=34.80  Aligned_cols=26  Identities=27%  Similarity=0.657  Sum_probs=20.1

Q ss_pred             cCCCceecccccccccCHHHHHHHHH
Q psy14799         90 TGERDVTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      +|-+||.|..|++.|.....+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            35678888888888888888887764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00043  Score=31.49  Aligned_cols=25  Identities=28%  Similarity=0.501  Sum_probs=15.4

Q ss_pred             ceecccccccccCHHHHHHHHHhhc
Q psy14799         94 DVTCGLCFQSFYSKADLVRHMKGRH  118 (230)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~~~H  118 (230)
                      ||+|+.|..-....++|..|++..|
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHHHc
Confidence            5666666666666666666665444

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.86  E-value=0.00046  Score=31.19  Aligned_cols=23  Identities=39%  Similarity=0.792  Sum_probs=10.3

Q ss_pred             cccccc--cccccCCHHHHHHhHHH
Q psy14799         66 PFPCDL--CEQRFLNKSHLAYHVKT   88 (230)
Q Consensus        66 ~~~C~~--C~~~f~~~~~l~~H~~~   88 (230)
                      ||.|+.  |++.|...+.|++|.++
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhc
Confidence            344443  44444444444444443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00047  Score=34.04  Aligned_cols=27  Identities=30%  Similarity=0.602  Sum_probs=20.6

Q ss_pred             CCCcccccc--cccccCChHHHHHHHHhhc
Q psy14799        120 NIRSFTCHL--CNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       120 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~H  147 (230)
                      .++||.|..  |+..|.+...|..| +..|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vH-k~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVH-KHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHH-HHHH
T ss_pred             CCCceecCCCCccccccchHHHHHh-hhhh
Confidence            467888844  88888888888888 5555

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.78  E-value=0.00075  Score=30.50  Aligned_cols=25  Identities=36%  Similarity=0.910  Sum_probs=12.1

Q ss_pred             ccccccccccCCHHHHHHhHHHhcC
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~   91 (230)
                      |.|..|...|...-.|..||-.|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            4444444444444444444444443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.68  E-value=0.00083  Score=29.09  Aligned_cols=22  Identities=41%  Similarity=0.677  Sum_probs=11.0

Q ss_pred             ceecccccccccCHHHHHHHHH
Q psy14799         94 DVTCGLCFQSFYSKADLVRHMK  115 (230)
Q Consensus        94 ~~~C~~C~~~f~~~~~l~~H~~  115 (230)
                      ||+|+.|...|....+|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4455555555555555555543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.60  E-value=0.00077  Score=30.45  Aligned_cols=27  Identities=22%  Similarity=0.442  Sum_probs=15.1

Q ss_pred             CcccccccccccCChHHHHHhHhccCC
Q psy14799         34 KSFQCDECDMSFGTHQALGRHKQCKHM   60 (230)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (230)
                      ..|.|..|...|...-.|+.||..|.+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            345566666666666566666555543

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.00021  Score=33.30  Aligned_cols=23  Identities=17%  Similarity=0.157  Sum_probs=19.9

Q ss_pred             CccccccccCCcccccc-ccccCC
Q psy14799        179 GICGSMWRVETWHPCHL-LTERNR  201 (230)
Q Consensus       179 ~~C~~~f~~~~~l~~H~-~~h~~~  201 (230)
                      +.|.|.|++.+.-.+|+ |+|..+
T Consensus         8 ~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           8 EGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             TTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CChhhhhcchhhhhhhccccccCC
Confidence            57999999999999997 888643

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0011  Score=29.56  Aligned_cols=25  Identities=44%  Similarity=0.648  Sum_probs=18.8

Q ss_pred             ccccccccccCChHHHHHHHHhhcC
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      |+|+.|+-....+++|+.|++..|+
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccCCcchhheeehhhhhHHhhhccc
Confidence            6788888777888888888776663

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.35  E-value=0.00053  Score=31.66  Aligned_cols=30  Identities=20%  Similarity=0.332  Sum_probs=24.8

Q ss_pred             hhhhhhhhhhhhhhccCHHHHHHHHHhhcCC
Q psy14799          3 LSFILDYWNKNYFFFLMGLKLEAHITTVHGD   33 (230)
Q Consensus         3 ~~~~c~~C~~C~~~f~~~~~l~~H~~~h~~~   33 (230)
                      ..|||.| +.|+..|+....|.+|+-.|+||
T Consensus         2 k~~iCsf-~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSF-ADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSS-GGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeC-CCcchhhccchhhhHHhhhhcCC
Confidence            3577876 78888999999999999888875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.33  E-value=0.0016  Score=28.31  Aligned_cols=24  Identities=38%  Similarity=0.809  Sum_probs=19.4

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      |.|+.|-+.|..+.++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            678888888888888888877666

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.33  E-value=0.00077  Score=30.56  Aligned_cols=26  Identities=54%  Similarity=1.032  Sum_probs=13.6

Q ss_pred             cccccc--cccccCCHHHHHHhHHHhcC
Q psy14799         66 PFPCDL--CEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        66 ~~~C~~--C~~~f~~~~~l~~H~~~h~~   91 (230)
                      ||+|..  |.+.|.+...|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            445544  55555555555555555544

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0014  Score=33.97  Aligned_cols=25  Identities=32%  Similarity=0.521  Sum_probs=22.5

Q ss_pred             cccccccccccCChHHHHHHHHhhcC
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      .|.|..|++.|++...|++| ...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~H-EAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQH-EAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHH-HHHHT
T ss_pred             eeeccccccccCCHHHHhHh-HHhcC
Confidence            58999999999999999999 77774

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.12  E-value=0.0011  Score=29.99  Aligned_cols=27  Identities=33%  Similarity=0.621  Sum_probs=18.5

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhcCC
Q psy14799        122 RSFTCHL--CNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       122 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      +||.|..  |.+.|.+.-.|.+| ...|++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrh-s~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRH-SLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHH-HHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhh-hccccC
Confidence            4677765  77888887777777 455543

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.91  E-value=0.0027  Score=28.12  Aligned_cols=21  Identities=43%  Similarity=0.805  Sum_probs=18.5

Q ss_pred             cccccccccccCChHHHHHHH
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHL  143 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~  143 (230)
                      ||.|..||+.|..+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            688999999999999998883

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.67  E-value=0.0044  Score=27.63  Aligned_cols=24  Identities=29%  Similarity=0.537  Sum_probs=14.2

Q ss_pred             ccccccccccCChHHHHHhHhccC
Q psy14799         36 FQCDECDMSFGTHQALGRHKQCKH   59 (230)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~~   59 (230)
                      -+|+.|..+..++..|+.|.++|.
T Consensus         3 ekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGC
T ss_pred             ccCcccccccCcHHHHHHhhcccc
Confidence            356666666666666666665543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.0078  Score=26.80  Aligned_cols=23  Identities=30%  Similarity=0.530  Sum_probs=13.3

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      -+|+.|.++..++..|+.| .++|
T Consensus         3 ekc~ecsyscsskaalrvh-~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIH-ERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHH-HGGG
T ss_pred             ccCcccccccCcHHHHHHh-hccc
Confidence            4566666666666666666 4444

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.34  E-value=0.0053  Score=27.17  Aligned_cols=21  Identities=24%  Similarity=0.640  Sum_probs=10.4

Q ss_pred             cccccccccccCChHHHHHhH
Q psy14799         35 SFQCDECDMSFGTHQALGRHK   55 (230)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~   55 (230)
                      ||+|..||+.+-.+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            345555555555555554443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.28  E-value=0.0044  Score=30.45  Aligned_cols=28  Identities=32%  Similarity=0.622  Sum_probs=18.9

Q ss_pred             CCCcccc--cccccccCChHHHHHhHhccC
Q psy14799         32 GDKSFQC--DECDMSFGTHQALGRHKQCKH   59 (230)
Q Consensus        32 ~~~~~~C--~~C~~~f~~~~~l~~H~~~~~   59 (230)
                      .++||.|  +-|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3677777  447777777777777766543

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.28  E-value=0.0019  Score=28.50  Aligned_cols=26  Identities=12%  Similarity=0.124  Sum_probs=17.8

Q ss_pred             hhhhhhhhhhhhccCHHHHHHHHHhhc
Q psy14799          5 FILDYWNKNYFFFLMGLKLEAHITTVH   31 (230)
Q Consensus         5 ~~c~~C~~C~~~f~~~~~l~~H~~~h~   31 (230)
                      |+|.| ..|++.|.....|+.|+-+|+
T Consensus         2 yvchf-e~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHF-ENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCS-TTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEe-cCchHHHhhccceEEEeeccc
Confidence            45554 567777777777777776664

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.12  E-value=0.0055  Score=29.05  Aligned_cols=20  Identities=35%  Similarity=0.815  Sum_probs=18.5

Q ss_pred             cccccccccccCChHHHHHH
Q psy14799        123 SFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H  142 (230)
                      .|.|..|+++|.....+.+|
T Consensus         4 afvcskcgktftrrntm~rh   23 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARH   23 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHH
T ss_pred             eeeecccccchhcchHHHHH
Confidence            58999999999999999999

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0046  Score=29.71  Aligned_cols=29  Identities=17%  Similarity=0.331  Sum_probs=22.4

Q ss_pred             hhhhh--hhhhhhhccCHHHHHHHHHhhcCC
Q psy14799          5 FILDY--WNKNYFFFLMGLKLEAHITTVHGD   33 (230)
Q Consensus         5 ~~c~~--C~~C~~~f~~~~~l~~H~~~h~~~   33 (230)
                      |+|.|  |+.-++.|.....|..|+++|+||
T Consensus         3 y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             eEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            56643  445556799999999999999886

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.74  E-value=0.016  Score=25.71  Aligned_cols=24  Identities=29%  Similarity=0.528  Sum_probs=15.3

Q ss_pred             eecccccccccCHHHHHHHHHhhc
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRH  118 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H  118 (230)
                      |+|+.|+.....+++|..|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            566666666666666666666444

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.68  E-value=0.0075  Score=31.16  Aligned_cols=24  Identities=21%  Similarity=0.458  Sum_probs=19.5

Q ss_pred             cccccccccccCChHHHHHhHhcc
Q psy14799         35 SFQCDECDMSFGTHQALGRHKQCK   58 (230)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~   58 (230)
                      -|.|..|++.|.....|++|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            477888888888888888887765

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.15  E-value=0.03  Score=25.16  Aligned_cols=25  Identities=36%  Similarity=0.665  Sum_probs=17.3

Q ss_pred             ccccccccccCChHHHHHHHHhhcC
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      |.|..||+...+...++.|+...|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            5677777777777777777666664

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.00  E-value=0.02  Score=27.17  Aligned_cols=28  Identities=21%  Similarity=0.507  Sum_probs=23.9

Q ss_pred             CCcccccccccccCChHHHHHHHHhhcC
Q psy14799        121 IRSFTCHLCNKGFFRKSYLKVHLLTIHM  148 (230)
Q Consensus       121 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~  148 (230)
                      +..|.|.+|.+++...+++-+|..+.|.
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            4468999999999999999999888874

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.93  E-value=0.015  Score=27.82  Aligned_cols=20  Identities=35%  Similarity=0.542  Sum_probs=14.4

Q ss_pred             ccccCCHHHHHHhHHHhcCC
Q psy14799         73 EQRFLNKSHLAYHVKTHTGE   92 (230)
Q Consensus        73 ~~~f~~~~~l~~H~~~h~~~   92 (230)
                      ++.|.....|..|+++|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            35677777777777777764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.90  E-value=0.032  Score=24.05  Aligned_cols=21  Identities=38%  Similarity=0.947  Sum_probs=10.2

Q ss_pred             ccccccccccCCHHHHHHhHH
Q psy14799         67 FPCDLCEQRFLNKSHLAYHVK   87 (230)
Q Consensus        67 ~~C~~C~~~f~~~~~l~~H~~   87 (230)
                      |+|+.|-+.|..+.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            445555555555555444443

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.03  Score=26.44  Aligned_cols=27  Identities=22%  Similarity=0.544  Sum_probs=19.7

Q ss_pred             cccccccccccCChHHHHHhHhccCCC
Q psy14799         35 SFQCDECDMSFGTHQALGRHKQCKHMD   61 (230)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~   61 (230)
                      .|.|..|+++|..+..+.+|...-.+.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            477888888888888888887655543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.07  E-value=0.044  Score=28.07  Aligned_cols=28  Identities=25%  Similarity=0.381  Sum_probs=20.9

Q ss_pred             CCCcccccccccccCChHHHHHHHHhhc
Q psy14799        120 NIRSFTCHLCNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       120 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H  147 (230)
                      .+.|-.|++|+.....+.+|++|+...|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            3456778888888888888888876666

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.61  E-value=0.036  Score=25.86  Aligned_cols=22  Identities=27%  Similarity=0.705  Sum_probs=17.7

Q ss_pred             cccccccccccCChHHHHHhHh
Q psy14799         35 SFQCDECDMSFGTHQALGRHKQ   56 (230)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~   56 (230)
                      .|.|.-||..|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4788888888888888888864

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.56  E-value=0.056  Score=24.70  Aligned_cols=20  Identities=30%  Similarity=0.594  Sum_probs=9.6

Q ss_pred             cccccCCHHHHHHhHHHhcC
Q psy14799         72 CEQRFLNKSHLAYHVKTHTG   91 (230)
Q Consensus        72 C~~~f~~~~~l~~H~~~h~~   91 (230)
                      |+..|...+.|..|+-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            44444444444444444443

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.37  E-value=0.077  Score=23.77  Aligned_cols=25  Identities=28%  Similarity=0.413  Sum_probs=17.0

Q ss_pred             eecccccccccCHHHHHHHHHhhcC
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRHL  119 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~  119 (230)
                      |.|..|++...+...++-|....|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            6677777777777777777664443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.10  E-value=0.044  Score=25.59  Aligned_cols=20  Identities=35%  Similarity=0.647  Sum_probs=15.2

Q ss_pred             cccccccccccCChHHHHHH
Q psy14799        123 SFTCHLCNKGFFRKSYLKVH  142 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H  142 (230)
                      .|.|+-||-.|.+.+.|..|
T Consensus         8 rf~c~pcgirfss~stleah   27 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAH   27 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHH
T ss_pred             ceeccccceeecChhHHHhh
Confidence            36777777778777777777

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.12  E-value=0.13  Score=23.04  Aligned_cols=24  Identities=38%  Similarity=0.743  Sum_probs=15.9

Q ss_pred             ccccc--cccccCChHHHHHHHHhhc
Q psy14799        124 FTCHL--CNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       124 ~~C~~--C~~~f~~~~~l~~H~~~~H  147 (230)
                      |.|..  |+..|.++.+++.|..+-|
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            55543  7777777777777766555

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.96  E-value=0.12  Score=23.09  Aligned_cols=19  Identities=32%  Similarity=0.564  Sum_probs=13.2

Q ss_pred             cccccCChHHHHHHHHhhc
Q psy14799        129 CNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       129 C~~~f~~~~~l~~H~~~~H  147 (230)
                      ||+.|++..-|..|++-.|
T Consensus         8 c~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TCCEESSHHHHHHHHHHGG
T ss_pred             chhhhccHHHHHhHHHHHH
Confidence            7777777777777765555

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.12  E-value=0.13  Score=22.82  Aligned_cols=18  Identities=39%  Similarity=0.646  Sum_probs=12.5

Q ss_pred             cccccCChHHHHHHHHhhc
Q psy14799        129 CNKGFFRKSYLKVHLLTIH  147 (230)
Q Consensus       129 C~~~f~~~~~l~~H~~~~H  147 (230)
                      |++.|.+.+.++.| .-.|
T Consensus         9 C~K~Frd~saMRKH-lhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKH-LHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHH-HGGG
T ss_pred             HHHHhhchHHHHHH-hhcc
Confidence            77777777777777 4333

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.09  E-value=0.19  Score=25.64  Aligned_cols=23  Identities=22%  Similarity=0.556  Sum_probs=11.9

Q ss_pred             CcccccccccccCCHHHHHHhHH
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVK   87 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~   87 (230)
                      .|..|++|+.......+|.+|..
T Consensus        23 qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHH
Confidence            34555555555555555555544

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.16  E-value=0.065  Score=30.37  Aligned_cols=22  Identities=23%  Similarity=0.354  Sum_probs=13.2

Q ss_pred             cccccccccccCChHHHHHhHh
Q psy14799         35 SFQCDECDMSFGTHQALGRHKQ   56 (230)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~   56 (230)
                      .|-|..|++.|.+...|..|++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            3556666666666666666654

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.81  E-value=0.054  Score=30.72  Aligned_cols=22  Identities=27%  Similarity=0.558  Sum_probs=16.1

Q ss_pred             cccccccccccCChHHHHHHHH
Q psy14799        123 SFTCHLCNKGFFRKSYLKVHLL  144 (230)
Q Consensus       123 ~~~C~~C~~~f~~~~~l~~H~~  144 (230)
                      .|-|..|++.|.+...|..|++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            3667777777777777777754

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.40  E-value=0.13  Score=28.61  Aligned_cols=14  Identities=29%  Similarity=0.878  Sum_probs=6.5

Q ss_pred             cccccccccccCCH
Q psy14799         66 PFPCDLCEQRFLNK   79 (230)
Q Consensus        66 ~~~C~~C~~~f~~~   79 (230)
                      .|.|+.|++.|...
T Consensus        14 ~y~Cp~C~~~ys~L   27 (62)
T d1vd4a_          14 SFKCPVCSSTFTDL   27 (62)
T ss_dssp             EEECSSSCCEEEHH
T ss_pred             ceECCCCCCCcchh
Confidence            34444444444443

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.94  E-value=0.31  Score=22.92  Aligned_cols=27  Identities=22%  Similarity=0.544  Sum_probs=16.5

Q ss_pred             CCceecccccccccCHHHHHHHHHhhc
Q psy14799         92 ERDVTCGLCFQSFYSKADLVRHMKGRH  118 (230)
Q Consensus        92 ~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (230)
                      +..|.|.+|.+.+...+++-+|....|
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            334666666666666666666665444

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.29  E-value=0.35  Score=22.95  Aligned_cols=26  Identities=27%  Similarity=0.438  Sum_probs=17.1

Q ss_pred             ccccccccccCChHHHHHHHHhhcCC
Q psy14799        124 FTCHLCNKGFFRKSYLKVHLLTIHMQ  149 (230)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~~H~~  149 (230)
                      ..|-+|-++|.+..++-+|...+|..
T Consensus         4 ltclecmrtfkssfsiwrhqvevhnq   29 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVEVHNQ   29 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHHTSCC
T ss_pred             ccHHHHHHHHHHHHHHHHhhheeccc
Confidence            45666777777777777776666643

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.54  E-value=0.5  Score=22.40  Aligned_cols=26  Identities=31%  Similarity=0.503  Sum_probs=15.3

Q ss_pred             eecccccccccCHHHHHHHHHhhcCC
Q psy14799         95 VTCGLCFQSFYSKADLVRHMKGRHLN  120 (230)
Q Consensus        95 ~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (230)
                      ..|..|-+.|.+...+.+|+...|..
T Consensus         4 ltclecmrtfkssfsiwrhqvevhnq   29 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVEVHNQ   29 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHHTSCC
T ss_pred             ccHHHHHHHHHHHHHHHHhhheeccc
Confidence            45666666666666666666545543

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=83.63  E-value=0.28  Score=23.37  Aligned_cols=21  Identities=19%  Similarity=0.064  Sum_probs=11.4

Q ss_pred             hhhhhhhhhccCHHHHHHHHH
Q psy14799          8 DYWNKNYFFFLMGLKLEAHIT   28 (230)
Q Consensus         8 ~~C~~C~~~f~~~~~l~~H~~   28 (230)
                      .||..|...|.....+.+|.+
T Consensus         9 rYC~~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_           9 KYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHH
T ss_pred             hHHhhCCceehhHHHHHHHHH
Confidence            355555555555555555544

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.35  E-value=0.62  Score=25.52  Aligned_cols=26  Identities=19%  Similarity=0.668  Sum_probs=19.7

Q ss_pred             CcccccccccccCCHHHHHHhHHHhc
Q psy14799         65 RPFPCDLCEQRFLNKSHLAYHVKTHT   90 (230)
Q Consensus        65 ~~~~C~~C~~~f~~~~~l~~H~~~h~   90 (230)
                      ..|.|..|...|.+...|..|...|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            45778888888888888888877664