Psyllid ID: psy14874

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010-----
Protein Sequence
MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNKVPIIKFMSYLTSHMYLMFLLMLVGITPIYPVVRPNLVPYWYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEGKITTHLLPFQFVYNLMVCSKNHNNKPMEEFVLMSPAPVDTAAKLSSIYITLATKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHcHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHccccccccccccccccccHHHHHHHccHHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHcccHHHHHHHHHcccHHHHHHHHcccccccccccHHHHHHHccHHHHHHHHHccccccccccccccccccccHHHHHHHHHHccccccccccccccHHHHHHcccccccHHHHHHHHHHccccccccccccccccccHHHHHHHHccHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHcccHHHHcccHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccHHHHHHHcccccHHcccccccHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccEccccccHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccccccccccHHHHHHHHccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccccccccccHccccccccccccccHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHccHEEEEEEEEEcccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccEEEEEEccccccccc
Coil and Loop (DISEMBL)
MLEQMSGTEISKALNkqtsigwtplLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLgasidatddqgqkpihvaaQNNFPEVAQIFLRahpslvtattkdgntcAHIAAMQGSVGVIEELMKFDRSGVIsarnrvteatplqlaaegghANVVRVLVKAGasctdenktgFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLshvpgtvksdpptgasflgelgsesgmtplhlaaysGNENVVRLLLNSagvqvdaqtqengynplhlacFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGqgaeinatdkggarsIHTAARYGHVGIINTLlqkgekvdvttnnlacGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLgqgaeinaTDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLgasidatddqgqkpihvaaQNNFPEVAQIFLRahpslvtatTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFilcppvwicftlslghkynkvpIIKFMSYLTSHMYLMFLLMLVGitpiypvvrpnlvpYWYEWTLLVWLSGLLLfeltnpsdksglgWVKLAVLLFGIFGVALHLLEYTFIlsegkitthllpFQFVYNLMVcsknhnnkpmeefvlmspapvdtAAKLSSIYITLATKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFilcppvwicftlslghkynk
Flexible Loop (DISEMBL)
MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPlqlaaegghaNVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHvpgtvksdppTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKafinsksrvGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNKVPIIKFMSYLTSHMYLMFLLMLVGITPIYPVVRPNLVPYWYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEGKITTHLLPFQFVYNLMVCSKNHNNKPMEEFVLMSPAPVDTAAKLSSIYITLATKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNK
Low Complexity Region (SEG)
MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATEllalaaGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNKVPIIKFMSYLTSHMYLMFLLMLVGITPIYPVVRPNLVPYWYEWTllvwlsglllfelTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEGKITTHLLPFQFVYNLMVCSKNHNNKPMEEFVLMSPAPVDTAAKLSSIYITLATKEKERAKDLIAAGKHCEGMATEllalaaGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNK
Disordered region (IsUnstruct)
****************QTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEE***SKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVP************************PLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATT*****AKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNKVPIIKFMSYLTSHMYLMFLLMLVGITPIYPVVRPNLVPYWYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEGKITTHLLPFQFVYNLMVCSKNHNNKPMEEFVLMSPAPVDTAAKLSSIYITLATKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGH****
Disordered Region (DISOPRED)
ML*Q*SGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNKVPIIKFMSYLTSHMYLMFLLMLVGITPIYPVVRPNLVPYWYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEGKITTHLLPFQFVYNLMVCSKNHNNKPMEEFVLMSPAPVDTAAKLSSIYITLATKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHK***
Disordered Region (DISEMBL)
**********SKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNKVPIIKFMSYLTSHMYLMFLLMLVGITPIYPVVRPNLVPYWYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEGKITTHLLPFQFVYNLMVCSKNHNNKPMEEFVLMSPAPVDTAAKLSSIYITLATKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNK
Disordered Region (DISPRO)
MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKS***TGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNKVPIIKFMSYLTSHMYLMFLLMLVGITPIYPVVRPNLVPYWYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEGKITTHLLPFQFVYNLMVCSKNHNNKPMEEFVLMSPAPVDTAAKLSSIYITLATKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHK***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNKVPIIKFMSYLTSHMYLMFLLMLVGITPIYPVVRPNLVPYWYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEGKITTHLLPFQFVYNLMVCSKNHNNKPMEEFVLMSPAPVDTAAKLSSIYITLATKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	1015	2.2.26 [Sep-21-2011]
Q12955	4377	Ankyrin-3 OS=Homo sapiens	yes	N/A	0.580	0.134	0.314	5e-75
G5E8K5	1961	Ankyrin-3 OS=Mus musculus	no	N/A	0.579	0.299	0.317	4e-68
Q8C8R3	3898	Ankyrin-2 OS=Mus musculus	no	N/A	0.578	0.150	0.317	1e-67
Q01484	3957	Ankyrin-2 OS=Homo sapiens	no	N/A	0.574	0.147	0.320	2e-67
P16157	1881	Ankyrin-1 OS=Homo sapiens	no	N/A	0.563	0.304	0.329	2e-62
Q02357	1862	Ankyrin-1 OS=Mus musculus	no	N/A	0.510	0.278	0.296	4e-59
O15084	1053	Serine/threonine-protein	no	N/A	0.603	0.582	0.289	1e-54
Q5F478	990	Serine/threonine-protein	no	N/A	0.596	0.611	0.291	4e-53
Q505D1	1053	Serine/threonine-protein	no	N/A	0.603	0.582	0.284	6e-53
B2RXR6	993	Serine/threonine-protein	no	N/A	0.585	0.598	0.294	3e-51

>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3

 Score =  283 bits (724), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 215/683 (31%), Positives = 332/683 (48%), Gaps = 94/683 (13%)

Query: 26  LIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSR 85
           L A   GH+E     + N   +++ +Q G +ALHLA++ G+++V   LL  +A +++ ++
Sbjct: 46  LRAARAGHLEKALDYIKNGVDINICNQNGLNALHLASKEGHVEVVSELLQREANVDAATK 105

Query: 86  VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA 145
            G TALH+A++ G A++ + LV + A V +  +    TPL++AA+   L+V K LLD GA
Sbjct: 106 KGNTALHIASLAGQAEVVKVLVTNGANV-NAQSQNGFTPLYMAAQENHLEVVKFLLDNGA 164

Query: 146 SIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH-------PSLVTATTKD----------- 187
           S     + G  P+ VA Q    +V  + L          P+L  A  KD           
Sbjct: 165 SQSLATEDGFTPLAVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQN 224

Query: 188 ----------GNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHA 237
                     G T  HIAA  G++ V   L+    +   +ARN +   TPL +A++ G+A
Sbjct: 225 DNNADVESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDI---TPLHVASKRGNA 281

Query: 238 NVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVA 297
           N+V++L+  GA    + + G T +H  A++GH QV+E +    A  +   K G++ LH+A
Sbjct: 282 NMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPLHMA 341

Query: 298 AYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLN 357
                 + V+ LL H    V  D  T             +T LH+AA+ G+  V ++LL+
Sbjct: 342 TQGDHLNCVQLLLQH---NVPVDDVT----------NDYLTALHVAAHCGHYKVAKVLLD 388

Query: 358 SAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGH 417
                 +A+   NG+ PLH+AC    + V+ LLL   A  +Q+  ++G T +H+AA  GH
Sbjct: 389 KKA-NPNAKAL-NGFTPLHIACKKNRIKVMELLLKHGAS-IQAVTESGLTPIHVAAFMGH 445

Query: 418 LQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVT 477
           + +V  L+  GA  N T+  G  ++H AAR G   ++  L+Q G +V+            
Sbjct: 446 VNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKA--------- 496

Query: 478 VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHK 537
                            K+ +T LHI+A  G   +V+ LL QGA  NA            
Sbjct: 497 -----------------KDDQTPLHISARLGKADIVQQLLQQGASPNAA----------- 528

Query: 538 AFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVC 597
                 +  G T LHL+A  G+ D+  FL+ DH A + I T +  TPLH+AA+ G+L+V 
Sbjct: 529 ------TTSGYTPLHLSAREGHEDVAAFLL-DHGASLSITTKKGFTPLHVAAKYGKLEVA 581

Query: 598 KLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAA 657
            LLL   AS DA    G  P+HVAA  +  +VA + L    S   A           IAA
Sbjct: 582 NLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLH--IAA 639

Query: 658 GKHCEGMATELLALAAGADSAGR 680
            K+   +AT LL   A A++  R
Sbjct: 640 KKNQMDIATTLLEYGADANAVTR 662

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.
Homo sapiens (taxid: 9606)

>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1

 Score =  260 bits (664), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 217/684 (31%), Positives = 334/684 (48%), Gaps = 96/684 (14%)

Query: 26  LIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSR 85
           L A   GH+E     + N   V++ +Q G +ALHLA++ G+++V   LL  +A +++ ++
Sbjct: 29  LRAARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATK 88

Query: 86  VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA 145
            G TALH+A++ G A++ + LV +  A ++  +    TPL++AA+   L+V + LLD GA
Sbjct: 89  KGNTALHIASLAGQAEVVKVLVTN-GANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGA 147

Query: 146 SIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH-------PSLVTATTKD----------- 187
           S     + G  P+ VA Q    +V  + L          P+L  A  KD           
Sbjct: 148 SQSLATEDGFTPLAVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQN 207

Query: 188 ----------GNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHA 237
                     G T  HIAA  G++ V   L+    +   +ARN +   TPL +A++ G+A
Sbjct: 208 DTNADVESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDI---TPLHVASKRGNA 264

Query: 238 NVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVA 297
           N+V++L+  GA    + + G T +H  A++GH QV+E +    A  +   K G++ LH+A
Sbjct: 265 NMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMA 324

Query: 298 AYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLN 357
                 + V+ LL H    V  D  T             +T LH+AA+ G+  V ++LL+
Sbjct: 325 TQGDHLNCVQLLLQH---NVPVDDVTN----------DYLTALHVAAHCGHYKVAKVLLD 371

Query: 358 SAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGH 417
                 +A+   NG+ PLH+AC    + V+ LLL   A  +Q+  ++G T +H+AA  GH
Sbjct: 372 KK-ASPNAKAL-NGFTPLHIACKKNRIRVMELLLKHGAS-IQAVTESGLTPIHVAAFMGH 428

Query: 418 LQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVT 477
           + +V  L+  GA  N T+  G  ++H AAR G   ++  L+Q G +V+            
Sbjct: 429 VNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKA--------- 479

Query: 478 VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHK 537
                            K+ +T LHI+A  G   +V+ LL QGA  NA            
Sbjct: 480 -----------------KDDQTPLHISARLGKADIVQQLLQQGASPNAA----------- 511

Query: 538 AFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVC 597
                 +  G T LHLAA  G+ D+  FL+ DH A + I T +  TPLH+AA+ G+L+V 
Sbjct: 512 ------TTSGYTPLHLAAREGHEDVAAFLL-DHGASLSITTKKGFTPLHVAAKYGKLEVA 564

Query: 598 KLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL-IA 656
            LLL   AS DA    G  P+HVAA  +  +VA + L    S   A    K     L IA
Sbjct: 565 SLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAA---KNGYTPLHIA 621

Query: 657 AGKHCEGMATELLALAAGADSAGR 680
           A K+   +AT LL   A A++  R
Sbjct: 622 AKKNQMDIATSLLEYGADANAVTR 645

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1.

Mus musculus (taxid: 10090)

>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2

 Score =  259 bits (661), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 207/651 (31%), Positives = 322/651 (49%), Gaps = 64/651 (9%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N     G   L +A   GH+ LV  +L   + VD   ++G +ALH+A+  G  +V   L
Sbjct: 57  INTCNQNGLNALHLAAKEGHVGLVQELLGRGSSVDSATKKGNTALHIASLAGQAEVVKVL 116

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           +   A IN++S+ G T L++AA   + D+ ++L+ ++ A     T    TPL +A + G 
Sbjct: 117 VKEGANINAQSQNGFTPLYMAAQENHIDVVKYLL-ENGANQSTATEDGFTPLAVALQQGH 175

Query: 134 LQVCKLLLDLGASIDATDDQGQ---KPIHVAAQNNFPEVAQIFLR-------AHPSLVTA 183
            Q   +LL+        D +G+     +H+AA+ +  + A + L+           +V  
Sbjct: 176 NQAVAILLE-------NDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNR 228

Query: 184 TTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVL 243
           TT+ G T  HIAA  G+V V   L+    +   +ARN +   TPL +A++ G+ N+V++L
Sbjct: 229 TTESGFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGI---TPLHVASKRGNTNMVKLL 285

Query: 244 VKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQA 303
           +  G     + + G T +H AA++GH+QV+E +   KA  +   K G++ LH+AA     
Sbjct: 286 LDRGGQIDAKTRDGLTPLHCAARSGHDQVVELLLERKAPLLARTKNGLSPLHMAAQGDHV 345

Query: 304 DTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQV 363
           + V+ LL +         P     L  L      T LH+AA+ G+  V +LLL+      
Sbjct: 346 ECVKHLLQY-------KAPVDDVTLDYL------TALHVAAHCGHYRVTKLLLDKRA-NP 391

Query: 364 DAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEV 423
           +A+   NG+ PLH+AC    + V+ LL+   A  +Q+  ++G T +H+AA  GHL +V +
Sbjct: 392 NARAL-NGFTPLHIACKKNRIKVMELLVKYGAS-IQAITESGLTPIHVAAFMGHLNIVLL 449

Query: 424 LLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDV------TTNNLAC--GH 475
           LL  GA  + T+  G  ++H AAR G V ++  LL+ G  VD       T  ++A   G 
Sbjct: 450 LLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGK 509

Query: 476 VTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLT 535
             +V LLL   A    +A  NG T LHI+A  G + +  VLL  GA          +L T
Sbjct: 510 TEIVQLLLQHMAH-PDAATTNGYTPLHISAREGQVDVASVLLEAGA--------AHSLAT 560

Query: 536 HKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQ 595
            K F         T LH+AA  G  D+ + L+   AA  D       TPLH+AA     +
Sbjct: 561 KKGF---------TPLHVAAKYGSLDVAKLLLQRRAAA-DSAGKNGLTPLHVAAHYDNQK 610

Query: 596 VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTK 646
           V  LLL+ GAS  AT   G  P+H+AA+ N  ++A   L       T T +
Sbjct: 611 VALLLLEKGASPHATAKNGYTPLHIAAKKNQMQIASTLLNYGAETNTVTKQ 661

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes (By similarity). Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Mus musculus (taxid: 10090)

>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4

 Score =  258 bits (658), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 208/649 (32%), Positives = 323/649 (49%), Gaps = 66/649 (10%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N     G   L +A   GH+ LV  +L   + VD   ++G +ALH+A+  G  +V   L
Sbjct: 57  INTCNQNGLNALHLAAKEGHVGLVQELLGRGSSVDSATKKGNTALHIASLAGQAEVVKVL 116

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           +   A IN++S+ G T L++AA   + D+ ++L+ ++ A     T    TPL +A + G 
Sbjct: 117 VKEGANINAQSQNGFTPLYMAAQENHIDVVKYLL-ENGANQSTATEDGFTPLAVALQQGH 175

Query: 134 LQVCKLLLDLGASIDATDDQGQ---KPIHVAAQNNFPEVAQIFLR-------AHPSLVTA 183
            Q   +LL+        D +G+     +H+AA+ +  + A + L+           +V  
Sbjct: 176 NQAVAILLE-------NDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNR 228

Query: 184 TTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVL 243
           TT+ G T  HIAA  G+V V   L+    +   +ARN +   TPL +A++ G+ N+V++L
Sbjct: 229 TTESGFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGI---TPLHVASKRGNTNMVKLL 285

Query: 244 VKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQA 303
           +  G     + + G T +H AA++GH+QV+E +    A  +   K G++ LH+AA     
Sbjct: 286 LDRGGQIDAKTRDGLTPLHCAARSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHV 345

Query: 304 DTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQV 363
           + V+ LL H         P     L  L      T LH+AA+ G+  V +LLL+      
Sbjct: 346 ECVKHLLQH-------KAPVDDVTLDYL------TALHVAAHCGHYRVTKLLLDKRA-NP 391

Query: 364 DAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEV 423
           +A+   NG+ PLH+AC    + V+ LL+   A  +Q+  ++G T +H+AA  GHL +V +
Sbjct: 392 NARAL-NGFTPLHIACKKNRIKVMELLVKYGAS-IQAITESGLTPIHVAAFMGHLNIVLL 449

Query: 424 LLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDV------TTNNLAC--GH 475
           LL  GA  + T+  G  ++H AAR G V ++  LL+ G  VD       T  ++A   G 
Sbjct: 450 LLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGK 509

Query: 476 VTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLT 535
             +V LLL   A    +A  NG T LHI+A  G + +  VLL  GA          +L T
Sbjct: 510 TEIVQLLLQHMAH-PDAATTNGYTPLHISAREGQVDVASVLLEAGA--------AHSLAT 560

Query: 536 HKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQ 595
            K F         T LH+AA  G  D+ + L+   AA  D       TPLH+AA     +
Sbjct: 561 KKGF---------TPLHVAAKYGSLDVAKLLLQRRAAA-DSAGKNGLTPLHVAAHYDNQK 610

Query: 596 VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR--AHPSLVT 642
           V  LLL+ GAS  AT   G  P+H+AA+ N  ++A   L   A  ++VT
Sbjct: 611 VALLLLEKGASPHATAKNGYTPLHIAAKKNQMQIASTLLNYGAETNIVT 659

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Homo sapiens (taxid: 9606)

>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3

 Score =  241 bits (615), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 207/628 (32%), Positives = 310/628 (49%), Gaps = 56/628 (8%)

Query: 18  TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHK 77
           +  G+TPL IA +  ++ +   +LN  A V+   Q G + LH+A+  G + +   LL   
Sbjct: 203 SKTGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRG 262

Query: 78  AFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVC 137
           A I +K++   T LH AA NG+  +   L+ DH A I   T    +P+H+AA+   L   
Sbjct: 263 AQIETKTKDELTPLHCAARNGHVRISEILL-DHGAPIQAKTKNGLSPIHMAAQGDHLDCV 321

Query: 138 KLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR--AHPSLVTATTKDGNTCAHIA 195
           +LLL   A ID        P+HVAA      VA++ L   A P+   +   +G T  HIA
Sbjct: 322 RLLLQYDAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPN---SRALNGFTPLHIA 378

Query: 196 AMQGSVGVIEELMKFDRSGVISARNRVTEA--TPLQLAAEGGHANVVRVLVKAGASCTDE 253
             +  V V+E L+K   S  I A   VTE+  TPL +A+  GH  +V+ L++ GAS    
Sbjct: 379 CKKNHVRVMELLLKTGAS--IDA---VTESGLTPLHVASFMGHLPIVKNLLQRGASPNVS 433

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHV 313
           N    T +H+AA+ GH +V + +  +KA      K   T LH AA  G  + V+ LL + 
Sbjct: 434 NVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLEN- 492

Query: 314 PGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYN 373
                ++P         L + +G TPLH+AA  G+   V  LL     Q  A   + G+ 
Sbjct: 493 ----NANP--------NLATTAGHTPLHIAAREGHVETVLALLEKEASQ--ACMTKKGFT 538

Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
           PLH+A   G V V  LLL R A    +A KNG T LH+A  H +L +V++LL +G   ++
Sbjct: 539 PLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHS 597

Query: 434 TDKGGARSIHTAARYGHVGIINTLLQKGEKVD------VTTNNLAC--GHVTVVGLLLSR 485
               G   +H AA+   V +  +LLQ G   +      VT  +LA   GH  +V LLLS+
Sbjct: 598 PAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK 657

Query: 486 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSR 545
            A+     +K+G T LH+ A  GH+ + +VL+  G  ++AT                 +R
Sbjct: 658 QANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDAT-----------------TR 699

Query: 546 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA 605
           +G T LH+A+  G   L +FL+  H A ++  T    +PLH AA+ G   +  LLL  GA
Sbjct: 700 MGYTPLHVASHYGNIKLVKFLLQ-HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGA 758

Query: 606 SIDATDDQGQKPIHVAAQNNFPEVAQIF 633
           S +     G  P+ +A +  +  V  + 
Sbjct: 759 SPNEVSSDGTTPLAIAKRLGYISVTDVL 786

Isoform Mu17 together with obscurin in skeletal muscle may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Homo sapiens (taxid: 9606)

>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2

 Score =  230 bits (586), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 181/610 (29%), Positives = 291/610 (47%), Gaps = 92/610 (15%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           G TPL IA  RG++ +V  +L+  A+++   ++  + LH AA +G++++ + LL H A I
Sbjct: 235 GITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPI 294

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
            +K++ G + +H+AA   + D  R L+  + A ID +TL   TPLH+AA  G  +V K+L
Sbjct: 295 QAKTKNGLSPIHMAAQGDHLDCVRLLLQ-YNAEIDDITLDHLTPLHVAAHCGHHRVAKVL 353

Query: 141 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGS 200
           LD GA  ++    G  P+H+A + N   V ++ L+   S + A T+ G T  H+A+  G 
Sbjct: 354 LDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGAS-IDAVTESGLTPLHVASFMGH 412

Query: 201 VGVIEELMKFDRSGVIS-----------ARNRVTEA-------------------TPLQL 230
           + +++ L++   S  +S           AR   TE                    TPL  
Sbjct: 413 LPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKANAKAKDDQTPLHC 472

Query: 231 AAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLG 290
           AA  GH  +V++L++ GAS       G T +H AA+ GH      +   +A      K G
Sbjct: 473 AARIGHTGMVKLLLENGASPNLATTAGHTPLHTAAREGHVDTALALLEKEASQACMTKKG 532

Query: 291 VTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNEN 350
            T LHVAA +G+      LL H         P  A        ++G+TPLH+A +  N +
Sbjct: 533 FTPLHVAAKYGKVRLAELLLEH------DAHPNAA-------GKNGLTPLHVAVHHNNLD 579

Query: 351 VVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLH 410
           +V+LLL   G         NGY PLH+A     + V   LL        +    G T LH
Sbjct: 580 IVKLLLPRGGSP--HSPAWNGYTPLHIAAKQNQIEVARSLLQYGGS-ANAESVQGVTPLH 636

Query: 411 IAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNN 470
           +AA  GH +MV +LL + A  N  +K G   +H  ++ GHV + + L++ G  VD TT  
Sbjct: 637 LAAQEGHTEMVALLLSKQANGNLGNKSGLTPLHLVSQEGHVPVADVLIKHGVTVDATT-- 694

Query: 471 LACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVC 530
                                   + G T LH+A+ +G++++V+ LL             
Sbjct: 695 ------------------------RMGYTPLHVASHYGNIKLVKFLL------------- 717

Query: 531 DALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE 590
                H+A +N+K+++G + LH AA  G+ D+   L+ + A+  ++ +    TPL +A  
Sbjct: 718 ----QHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEV-SSNGTTPLAIAKR 772

Query: 591 AGQLQVCKLL 600
            G + V  +L
Sbjct: 773 LGYISVTDVL 782

Attaches integral membrane proteins to cytoskeletal elements; binds to the erythrocyte membrane protein band 4.2, to Na-K ATPase, to the lymphocyte membrane protein GP85, and to the cytoskeletal proteins fodrin, tubulin, vimentin and desmin. Erythrocyte ankyrins also link spectrin (beta chain) to the cytoplasmic domain of the erythrocytes anion exchange protein; they retain most or all of these binding functions. In skeletal muscle, isoform Mu7 together with obscurin may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Mus musculus (taxid: 10090)

>sp|O15084|ANR28_HUMAN Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Homo sapiens GN=ANKRD28 PE=1 SV=5

 Score =  216 bits (549), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 209/723 (28%), Positives = 326/723 (45%), Gaps = 110/723 (15%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVC-DA 72
           +N+  + G TPL +AC  G   +VN +++  A V+  +++G + LH AA   +  +C + 
Sbjct: 232 MNEPNAYGNTPLHVACYNGQDVVVNELIDCGAIVNQKNEKGFTPLHFAAASTHGALCLEL 291

Query: 73  LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 132
           L+ + A +N KS+ G+T LH+ A++G     + ++    AVID       TPLH+AA  G
Sbjct: 292 LVGNGADVNMKSKDGKTPLHMTALHGRFSRSQTIIQS-GAVIDCEDKNGNTPLHIAARYG 350

Query: 133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCA 192
              +   L+  GA        G  P+H+AA + F +  +  L +   + T     G TC 
Sbjct: 351 HELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDF-GRTCL 409

Query: 193 HIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD 252
           H AA  G++  +  L+    +G    +      +PL  AA   +   +  LV +GAS  D
Sbjct: 410 HAAAAGGNLECLNLLLN---TGADFNKKDKFGRSPLHYAAANCNYQCLFALVGSGASVND 466

Query: 253 ENKTGFTAVHLAA-QNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLS 311
            ++ G T +H AA  +   + LE +  + A      K G  A+H +A +G    ++ + S
Sbjct: 467 LDERGCTPLHYAATSDTDGKCLEYLLRNDANPGIRDKQGYNAVHYSAAYGHRLCLQLIAS 526

Query: 312 HVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENG 371
             P  V  +  +G   L +  + + ++PLHLAAY G+   + +L+ S  + +D +   +G
Sbjct: 527 ETPLDVLMET-SGTDMLSDSDNRATISPLHLAAYHGHHQALEVLVQSL-LDLDVR-NSSG 583

Query: 372 YNPLHLACFGGHVTVVGLLLSRAADLL--------------------------------Q 399
             PL LA F GHV  V +L+++ A +L                                Q
Sbjct: 584 RTPLDLAAFKGHVECVDVLINQGASILVKDYILKRTPIHAAATNGHSECLRLLIGNAEPQ 643

Query: 400 SA----DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIIN 455
           +A    D NG+T L ++  +GH   V  LL +GA ++A DK G  ++H  A  GH   ++
Sbjct: 644 NAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGANVDAKDKWGRTALHRGAVTGHEECVD 703

Query: 456 TLLQKGEKVDVTTN--------NLACGHVTVVGLLLSRAADL---LQSADKNGKTCLHIA 504
            LLQ G K  +  +        + ACGH+ V+G LL  AA +     +AD +G T LH A
Sbjct: 704 ALLQHGAKCLLRDSRGRTPIHLSAACGHIGVLGALLQSAASMDANPATADNHGYTALHWA 763

Query: 505 ATHGHLQMVEVLLGQ---------------------------------GAEI-NATD--- 527
             +GH   VE+LL Q                                 GA I NATD   
Sbjct: 764 CYNGHETCVELLLEQEVFQKTEGNAFSPLHCAVINDNEGAAEMLIDTLGASIVNATDSKG 823

Query: 528 -------------KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVI 574
                        +    LL+H A +NS    G+T L +AA NG  +    LV   +A +
Sbjct: 824 RTPLHAAAFTDHVECLQLLLSHNAQVNSVDSTGKTPLMMAAENGQTNTVEMLVSSASAEL 883

Query: 575 DILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS---IDATDDQGQKPIHVAAQNNFPEVAQ 631
            +    K T LHLA   G      L+L+       I+AT+   Q P+HVAA+N    V Q
Sbjct: 884 TLQDNSKNTALHLACSKGHETSALLILEKITDRNLINATNAALQTPLHVAARNGLTMVVQ 943

Query: 632 IFL 634
             L
Sbjct: 944 ELL 946

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates. Involved in the PP6-mediated dephosphorylation of NFKBIE opposing its degradation in response to TNF-alpha. Selectively inhibits the phosphatase activity of PPP1C. Targets PPP1C to modulate HNRPK phosphorylation.

Homo sapiens (taxid: 9606)

>sp|Q5F478|ANR44_CHICK Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Gallus gallus GN=ANKRD44 PE=2 SV=1

 Score =  210 bits (535), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 191/655 (29%), Positives = 297/655 (45%), Gaps = 50/655 (7%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N + ++  TPL  A      E V  ++ + A V+  D+  ++ LH+AA +  LK  + +
Sbjct: 67  VNAKDNMWLTPLHRAVASRSEEAVQVLIKHSADVNARDKNWQTPLHVAAANKALKCAEII 126

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           +   + +N   R GRTALH AA+NG+ ++   L+    A I+    + +  LH AA  G 
Sbjct: 127 IPMLSSVNVSDRGGRTALHHAALNGHVEMVNLLLAK-GANINAFDKKDRRALHWAAYMGH 185

Query: 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAH 193
           L+V  LL++ GA +   D +G  P+H AA N    + +  L     +       GNT  H
Sbjct: 186 LEVVALLINHGAEVTCKDKKGYTPLHAAASNGQINIVKHLLNLGVEIDEMNIY-GNTALH 244

Query: 194 IAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGH-ANVVRVLVKAGASCTD 252
           IA   G   V+ EL+ +   G    +      TPL  AA   H A  + +LV  GA    
Sbjct: 245 IACYNGQDSVVNELIDY---GANVNQPNNNGFTPLHFAAASTHGALCLELLVNNGADVNI 301

Query: 253 ENKTGFTAVHLAAQNG---HNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVREL 309
           ++K G + +H+ A +G    +Q L  +++   ++   K  G T LHVAA +G    +  L
Sbjct: 302 QSKDGKSPLHMTAVHGRFTRSQTL--IQNGGEIDCVDKD-GNTPLHVAARYGHELLINTL 358

Query: 310 LSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQE 369
           ++    T K                  M PLHLAA + + +  R LL S+G ++D     
Sbjct: 359 ITSGADTAKC-------------GIHNMFPLHLAALNAHSDCCRKLL-SSGFEIDT-PDS 403

Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 429
            G   LH A  GG+V  + LL S  AD     DK G+T LH AA + H   +E L+  GA
Sbjct: 404 FGRTCLHAAAAGGNVECIKLLQSSGAD-FNKKDKRGRTPLHYAAANCHFHCIETLVTTGA 462

Query: 430 EINATDKGGARSIHTAARYG---HVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRA 486
            IN TD  G   +H AA         I+    +  E+++ T+          +  LL   
Sbjct: 463 NINETDDWGRTPLHYAAASDMDRKKNILGNSHENAEELERTSEMKEKEAALCLEFLLQND 522

Query: 487 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEI------------------NATDK 528
           A+     DK G   +H AA +GH Q +E+LL + + +                  N   +
Sbjct: 523 AN-PSIQDKEGYNTVHYAAAYGHRQCLELLLEKNSNMFEESDSSATKSPLHLAAYNGHHQ 581

Query: 529 VCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLA 588
             + LL     ++ K   GRTAL LAA  G+A+    L+   A+V     + K+TPLH +
Sbjct: 582 ALEVLLQSLVDLDIKDEKGRTALDLAAFKGHAECVEALISQGASVTVKDNVTKRTPLHAS 641

Query: 589 AEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTA 643
              G     +LLL++  + D TD +GQ P+ +A      +   + L    S+  A
Sbjct: 642 VINGHTPCLRLLLEVADNPDVTDAKGQTPLMLAVAYGHIDAVSLLLEKEASVDAA 696

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.

Gallus gallus (taxid: 9031)

>sp|Q505D1|ANR28_MOUSE Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Mus musculus GN=Ankrd28 PE=1 SV=1

 Score =  209 bits (533), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 206/723 (28%), Positives = 323/723 (44%), Gaps = 110/723 (15%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVC-DA 72
           +N+  + G TPL +AC  G   +VN +++  A V+  +++G + LH AA   +  +C + 
Sbjct: 232 MNEPNAYGNTPLHVACYNGQDVVVNELIDCGANVNQKNEKGFTPLHFAAASTHGALCLEL 291

Query: 73  LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 132
           L+ + A +N KS+ G+T LH+ A++G     + ++    AVID       TPLH+AA  G
Sbjct: 292 LVGNGADVNMKSKDGKTPLHMTALHGRFSRSQTIIQS-GAVIDCEDKNGNTPLHIAARYG 350

Query: 133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCA 192
              +   L+  GA        G  P+H+AA + F +  +  L +   + T     G TC 
Sbjct: 351 HELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDF-GRTCL 409

Query: 193 HIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD 252
           H AA  G++  +  L+    +G    +      +PL  AA   +   +  LV +GAS  D
Sbjct: 410 HAAAAGGNLECLNLLLN---TGADFNKKDKFGRSPLHYAAANCNYQCLFALVGSGASVND 466

Query: 253 ENKTGFTAVHLAA-QNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLS 311
            ++ G T +H AA  +   + LE +  + A      K G  A+H +A +G    ++ + S
Sbjct: 467 LDERGCTPLHYAATSDTDGKCLEYLLRNDANPGIRDKQGYNAVHYSAAYGHRLCLQLIAS 526

Query: 312 HVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENG 371
             P  V  +  +G   L +  + + ++PLHLAAY G+   + +L+ S  + +D +   +G
Sbjct: 527 ETPLDVLMET-SGTDMLSDSDNRATISPLHLAAYHGHHQALEVLVQSL-LDLDVR-NSSG 583

Query: 372 YNPLHLACFGGHVTVVGLLLSRAADLL--------------------------------Q 399
             PL LA F GHV  V +L+++ A +L                                Q
Sbjct: 584 RTPLDLAAFKGHVECVDVLINQGASILVKDYVLKRTPIHAAATNGHSECLRLLIGNAEPQ 643

Query: 400 SA----DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIIN 455
           +A    D NG+T L ++  +GH   V  LL +GA ++A DK G  ++H  A  GH   ++
Sbjct: 644 NAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGANVDAKDKWGRTALHRGAVTGHEECVD 703

Query: 456 TLLQKGEKVDVTTN--------NLACGHVTVVGLLLSRAADLLQS---ADKNGKTCLHIA 504
            LLQ G K  +  +        + ACGH+ V+G LL  A  +  +    D +G T LH A
Sbjct: 704 ALLQHGAKCLLRDSRGRTPIHLSAACGHIGVLGALLQSATSVDANPAVVDNHGYTALHWA 763

Query: 505 ATHGHLQMVEVLLGQ---------------------------------GAEI-NATD--- 527
             +GH   VE+LL Q                                 GA I NATD   
Sbjct: 764 CYNGHETCVELLLEQDVFQKIDGNAFSPLHCAVINDNEGAAEMLIDSLGASIVNATDSKG 823

Query: 528 -------------KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVI 574
                        +    LL+  A +NS    G+T L +AA NG  +    LV   +A +
Sbjct: 824 RTPLHAAAFTDHVECLQLLLSQNAQVNSADSTGKTPLMMAAENGQTNTVEMLVSSASADL 883

Query: 575 DILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS---IDATDDQGQKPIHVAAQNNFPEVAQ 631
            +    K T LHLA   G      L+L+       I+AT+   Q P+HVAA+N    V Q
Sbjct: 884 TLQDKSKNTALHLACGKGHETSALLILEKITDRNLINATNAALQTPLHVAARNGLTMVVQ 943

Query: 632 IFL 634
             L
Sbjct: 944 ELL 946

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates. Involved in the PP6-mediated dephosphorylation of NFKBIE opposing its degradation in response to TNF-alpha. Selectively inhibits the phosphatase activity of PPP1C. Targets PPP1C to modulate HNRPK phosphorylation.

Mus musculus (taxid: 10090)

>sp|B2RXR6|ANR44_MOUSE Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mus musculus GN=Ankrd44 PE=2 SV=1

 Score =  204 bits (519), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 191/648 (29%), Positives = 297/648 (45%), Gaps = 54/648 (8%)

Query: 13  ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDA 72
           ++N     G T L  A   GHME+VN +L   A ++ FD++ R ALH AA  G+L V   
Sbjct: 132 SVNVSDRGGRTALHHAALNGHMEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVAL 191

Query: 73  LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 132
           L+ H A +  K + G T LH AA NG   + + L+ +    ID + +   T LH+A   G
Sbjct: 192 LINHGAEVTCKDKKGYTPLHAAASNGQISVVKHLL-NLGVEIDEINVYGNTALHIACYNG 250

Query: 133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCA 192
           Q  V   L+D GA+++  ++ G  P+H AA +    +    L  + + V   +KDG +  
Sbjct: 251 QDAVVNELIDYGANVNQPNNSGFTPLHFAAASTHGALCLELLVNNGADVNIQSKDGKSPL 310

Query: 193 HIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD 252
           H+ A+ G     + L++    G I   ++    TPL +AA  GH  ++  L+ +GA    
Sbjct: 311 HMTAVHGRFTRSQTLIQ--NGGEIDCVDKDGN-TPLHVAARHGHELLINTLITSGADTAK 367

Query: 253 ENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSH 312
                   +HLAA N H+    ++ SS          G T LH AA  G  + ++ L S 
Sbjct: 368 CGIHSMFPLHLAALNAHSDCCRKLLSSGFEIDTPDTFGRTCLHAAAAGGNVECIKLLQS- 426

Query: 313 VPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGY 372
                     +GA F  +   + G TPLH AA + + + ++ L+ + G  V+ +T + G 
Sbjct: 427 ----------SGADFHKK--DKCGRTPLHYAAANCHFHCIKALV-TTGANVN-ETDDWGR 472

Query: 373 NPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 432
             LH A     +    ++L  A D  +  ++  +     AA       +E LL   A  +
Sbjct: 473 TALHYAA-ASDMDRNKMILGNAHDNSEELERAREVKEKDAAL-----CLEFLLQNDANPS 526

Query: 433 ATDKGGARSIHTAARYGHVGIINTLLQKG----EKVD----VTTNNLAC--GHVTVVGLL 482
             DK G  SIH AA YGH   +  LL++     E+ D     +  +LA   GH   + +L
Sbjct: 527 IRDKEGYNSIHYAAAYGHRQCLELLLERTNTGFEESDGGALKSPLHLAAYNGHHQALEVL 586

Query: 483 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINS 542
           L    D L   D+ G+T L++AA  GH + VE L+ QGA I   D V             
Sbjct: 587 LQSLVD-LDIRDEKGRTALYLAAFKGHTECVEALVNQGASIFVKDNV------------- 632

Query: 543 KSRVGRTALHLAAMNGYADLCRFLVH--DHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 600
                RT LH + +NG+    R L+   D+  V+D+   + QTPL LA   G +    LL
Sbjct: 633 ---TKRTPLHASVINGHTLCLRLLLETADNPEVVDVKDAKGQTPLMLAVAYGHIDAVSLL 689

Query: 601 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEK 648
           L+  A++DA D  G   +H        E  Q+ L    S++   ++ +
Sbjct: 690 LEKEANVDAVDIVGCTALHRGIMTGHEECVQMLLEQEASILCKDSRGR 737

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	1015
328718834	1716	PREDICTED: serine/threonine-protein phos	0.480	0.284	0.756	0.0
383850421	1711	PREDICTED: serine/threonine-protein phos	0.367	0.218	0.791	0.0
48095512	1711	PREDICTED: serine/threonine-protein phos	0.367	0.218	0.793	0.0
340728309	1477	PREDICTED: serine/threonine-protein phos	0.367	0.252	0.788	0.0
307197305	1482	Ankyrin-1 [Harpegnathos saltator]	0.479	0.328	0.760	0.0
380011932	1711	PREDICTED: LOW QUALITY PROTEIN: serine/t	0.367	0.218	0.791	0.0
350403217	1712	PREDICTED: serine/threonine-protein phos	0.367	0.217	0.788	0.0
340728307	1712	PREDICTED: serine/threonine-protein phos	0.367	0.217	0.788	0.0
332020535	1538	Ankyrin-1 [Acromyrmex echinatior]	0.479	0.316	0.756	0.0
307185525	1504	Ankyrin-1 [Camponotus floridanus]	0.479	0.323	0.752	0.0

>gi|328718834|ref|XP_001945728.2| PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like [Acyrthosiphon pisum]

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/496 (75%), Positives = 426/496 (85%), Gaps = 8/496 (1%)

Query: 1    MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
            ML  MS TE+ +++N+Q+S+GWTPLLIAC+RGHM LVNTMLNNHARVDVFD EGRSALHL
Sbjct: 630  MLNGMSPTEVQQSMNRQSSVGWTPLLIACHRGHMSLVNTMLNNHARVDVFDNEGRSALHL 689

Query: 61   AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
            AAE GYLKVCDALLTHKAFINSKSRVG TALHLAAMNG+ADLCRFL+HDH AVIDILTLR
Sbjct: 690  AAERGYLKVCDALLTHKAFINSKSRVGWTALHLAAMNGFADLCRFLIHDHNAVIDILTLR 749

Query: 121  KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
            KQTPLHLAA AGQL+VC+LLLDLGA+IDATDDQGQKPIH+A+QNN+PEV  +FL+ HP L
Sbjct: 750  KQTPLHLAASAGQLEVCRLLLDLGANIDATDDQGQKPIHIASQNNYPEVVHLFLQQHPQL 809

Query: 181  VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
            V A+TKDGNTCAHIAAMQGSV VI ELMKFD++GVISARNR+TEATPLQLAAEGGHA VV
Sbjct: 810  VLASTKDGNTCAHIAAMQGSVTVIIELMKFDKNGVISARNRITEATPLQLAAEGGHAQVV 869

Query: 241  RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
            +VLV+AGASC+DENK GFTAVHLAAQNGH  VLE +RSS++L + SK+LG+TALH+AAY 
Sbjct: 870  KVLVRAGASCSDENKAGFTAVHLAAQNGHLAVLEVLRSSQSLKISSKRLGMTALHMAAYC 929

Query: 301  GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
            GQ DTVRELLSH+P TVKSDPP+G S LG LG+ESGMTPLH AAYSGNENVVRLLLNSAG
Sbjct: 930  GQTDTVRELLSHIPATVKSDPPSGVSVLGVLGNESGMTPLHFAAYSGNENVVRLLLNSAG 989

Query: 361  VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
            VQVDA T E+GYN LHLACFGGHVTVVGLLLSRAADLL S+D NGKTCLHIAA++GH  M
Sbjct: 990  VQVDASTVESGYNALHLACFGGHVTVVGLLLSRAADLLHSSDLNGKTCLHIAASYGHYAM 1049

Query: 421  VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLAC------- 473
            VEVLLGQGAEINATDK G  ++H AAR G++ ++  L++ G      TN  A        
Sbjct: 1050 VEVLLGQGAEINATDKNGWTAMHCAARAGYLDVVKLLVESGASPKAETNYGASPIWFAAQ 1109

Query: 474  -GHVTVVGLLLSRAAD 488
             GH  V+  L+++  D
Sbjct: 1110 EGHNDVLEYLMTKEHD 1125

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850421|ref|XP_003700794.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like [Megachile rotundata]

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/469 (79%), Positives = 415/469 (88%)

Query: 1    MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
            M+ +MS TE+ KALN+Q+++GWTPLLIA +RGHMELV T+L NHARVDVFD EGRSALHL
Sbjct: 627  MISRMSATEVQKALNRQSAVGWTPLLIAAHRGHMELVTTLLANHARVDVFDLEGRSALHL 686

Query: 61   AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
            AAEHGYL+VCDALL +KAFINSKSRVGRTALHLAAMNGY+ L +FLV DH A ID+LTLR
Sbjct: 687  AAEHGYLQVCDALLANKAFINSKSRVGRTALHLAAMNGYSHLVKFLVQDHGAAIDVLTLR 746

Query: 121  KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
            KQTPLHLAA AGQL+VCKLLL+LGASIDATDDQGQKPIH AA NN+ EVAQ+FL+ HPSL
Sbjct: 747  KQTPLHLAAGAGQLEVCKLLLELGASIDATDDQGQKPIHAAAMNNYAEVAQLFLQRHPSL 806

Query: 181  VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
            V A TKDGNTCAHIAAMQGSV VIEELMKFDR GVISARN++TEATPLQLAAEGGHA VV
Sbjct: 807  VMACTKDGNTCAHIAAMQGSVRVIEELMKFDRQGVISARNKLTEATPLQLAAEGGHAEVV 866

Query: 241  RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
            + LV+AGASC DEN+ GFTAVHLAAQ+GH QVLE MRSS++L + SKKLGVTALHVAAYF
Sbjct: 867  KALVRAGASCADENRAGFTAVHLAAQHGHGQVLEVMRSSQSLRISSKKLGVTALHVAAYF 926

Query: 301  GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
            GQADTVRELL+HVPGTVKSDPPTG S +GELGSESGMTPLHLAAYSGNENVVRLLLNSAG
Sbjct: 927  GQADTVRELLTHVPGTVKSDPPTGGSLVGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 986

Query: 361  VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
            VQV+A T ENG+NPLHLACFGGH+TVVGLLLSR+A+LL S+D+ GKT LHIAATHGH QM
Sbjct: 987  VQVEAATTENGFNPLHLACFGGHITVVGLLLSRSAELLHSSDRYGKTGLHIAATHGHYQM 1046

Query: 421  VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
            VEVLLGQGAEINATDK G   +H AAR G++ ++  L++ G      TN
Sbjct: 1047 VEVLLGQGAEINATDKNGWTPLHCAARAGYLDVVKLLVESGASPKSETN 1095

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48095512|ref|XP_392309.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C [Apis mellifera]

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/469 (79%), Positives = 414/469 (88%)

Query: 1    MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
            M+  MS TE+ KALN+Q+++GWTPLLIA +RGHMELV T+L NHARVDVFD EGRSALHL
Sbjct: 624  MISGMSATEVQKALNRQSAVGWTPLLIAAHRGHMELVTTLLANHARVDVFDLEGRSALHL 683

Query: 61   AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
            AAEHGYL+VCDALL +KAFINSKSRVGRTALHLAAMNGY+ L +FLV DH A ID+LTLR
Sbjct: 684  AAEHGYLQVCDALLANKAFINSKSRVGRTALHLAAMNGYSHLVKFLVQDHGAAIDVLTLR 743

Query: 121  KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
            KQTPLHLAA AGQL+VCKLLL+LGASIDATDDQGQKPIH AA NN+ EVAQ+FL+ HPSL
Sbjct: 744  KQTPLHLAAGAGQLEVCKLLLELGASIDATDDQGQKPIHAAAMNNYAEVAQLFLQRHPSL 803

Query: 181  VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
            V A TKDGNTCAHIAAMQGSV VIEELMKFDR GVISARN++TEATPLQLAAEGGHA VV
Sbjct: 804  VMACTKDGNTCAHIAAMQGSVRVIEELMKFDRQGVISARNKLTEATPLQLAAEGGHAEVV 863

Query: 241  RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
            R LV+AGASC DEN+ GFTAVHLAAQ+GH QVLE MRSS++L + SKKLGVTALHVAAYF
Sbjct: 864  RALVRAGASCADENRAGFTAVHLAAQHGHGQVLEVMRSSQSLRISSKKLGVTALHVAAYF 923

Query: 301  GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
            GQADTVRELL+HVPGTVKSDPPTG S +GELGSESGMTPLHLAAYSGNENVVRLLLNSAG
Sbjct: 924  GQADTVRELLTHVPGTVKSDPPTGGSLVGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 983

Query: 361  VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
            VQV+A T ENG+NPLHLACFGGH+TVVGLLLSR+A+LL S+D+ GKT LHIAATHGH QM
Sbjct: 984  VQVEAATTENGFNPLHLACFGGHITVVGLLLSRSAELLHSSDRYGKTGLHIAATHGHYQM 1043

Query: 421  VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
            VEVLLGQGAEINATDK G   +H AAR G++ ++  L++ G      TN
Sbjct: 1044 VEVLLGQGAEINATDKNGWTPLHCAARAGYLDVVKLLVESGASPKSETN 1092

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340728309|ref|XP_003402468.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform 2 [Bombus terrestris]

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/469 (78%), Positives = 414/469 (88%)

Query: 1   MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
           M+  MS TE+ KALN+Q+++GWTPLLIA +RGHMELV T+L NHARVDVFD EGRSALHL
Sbjct: 391 MISGMSATEVQKALNRQSAVGWTPLLIAAHRGHMELVTTLLANHARVDVFDLEGRSALHL 450

Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
           AAEHGYL+VCDALL +KAFINSKSRVGRTALHLAAMNGY+ L +FLV DH A ID+LTLR
Sbjct: 451 AAEHGYLQVCDALLANKAFINSKSRVGRTALHLAAMNGYSHLVKFLVQDHGAAIDVLTLR 510

Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
           KQTPLHLAA AGQL+VCKLLL+LGASIDATDDQGQKPIH AA NN+ EVAQ+FL+ HPSL
Sbjct: 511 KQTPLHLAAGAGQLEVCKLLLELGASIDATDDQGQKPIHAAAMNNYAEVAQLFLQRHPSL 570

Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
           V A TKDGNTCAHIAAMQGSV VIEELMKFDR GVISARN++TEATPLQLAAEGGHA VV
Sbjct: 571 VMACTKDGNTCAHIAAMQGSVRVIEELMKFDRQGVISARNKLTEATPLQLAAEGGHAEVV 630

Query: 241 RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
           + LV+AGASC DEN+ GFTAVHLAAQ+GH QVLE MRSS++L + SKKLGVTALHVAAYF
Sbjct: 631 KALVRAGASCADENRAGFTAVHLAAQHGHGQVLEVMRSSQSLRISSKKLGVTALHVAAYF 690

Query: 301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
           GQADTVRELL++VPGTVKSDPPTG S +GELGSESGMTPLHLAAYSGNENVVRLLLNSAG
Sbjct: 691 GQADTVRELLTNVPGTVKSDPPTGGSLVGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 750

Query: 361 VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
           VQV+A T ENG+NPLHLACFGGH+TVVGLLLSR+A+LL S+D+ GKT LHIAATHGH QM
Sbjct: 751 VQVEAATTENGFNPLHLACFGGHITVVGLLLSRSAELLHSSDRYGKTGLHIAATHGHYQM 810

Query: 421 VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
           VEVLLGQGAEINATDK G   +H AAR G++ ++  L++ G      TN
Sbjct: 811 VEVLLGQGAEINATDKNGWTPLHCAARAGYLDVVKLLVESGASPKSETN 859

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307197305|gb|EFN78597.1| Ankyrin-1 [Harpegnathos saltator]

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/497 (76%), Positives = 421/497 (84%), Gaps = 10/497 (2%)

Query: 1   MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
           M+ +MS TE+ KALNKQ+++GWTPLLIA +RGHMELV+T+L NH RVDVFD EGRSALHL
Sbjct: 391 MISRMSATEVQKALNKQSAVGWTPLLIAAHRGHMELVSTLLANHGRVDVFDLEGRSALHL 450

Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
           AAEHGYL+VCDALL +KAFINSKSRVGRTALHLAAMNGY  L RFLV DH A ID+LTLR
Sbjct: 451 AAEHGYLQVCDALLANKAFINSKSRVGRTALHLAAMNGYTHLVRFLVQDHGAAIDVLTLR 510

Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
           KQTPLHLAA AGQL+VCKLLL+LGASIDATDDQGQKPIH AA NN+ EVAQ+FL+ H SL
Sbjct: 511 KQTPLHLAAGAGQLEVCKLLLELGASIDATDDQGQKPIHAAAMNNYAEVAQLFLQRHASL 570

Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
           V A TKDGNTCAHIAAMQGSV VIEELMKFDR GVISARN++TEATPLQLAAEGGHA VV
Sbjct: 571 VMACTKDGNTCAHIAAMQGSVRVIEELMKFDRQGVISARNKLTEATPLQLAAEGGHAEVV 630

Query: 241 RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
           + LV+AGASC DEN+ GFTAVHLAAQ+GH QVLE MRSS++L + SKKLGVTALHVAAYF
Sbjct: 631 KALVRAGASCADENRAGFTAVHLAAQHGHGQVLEVMRSSQSLRISSKKLGVTALHVAAYF 690

Query: 301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
           GQADTVRELL+HVPGTVKSDPPTG + + ELGSESGMTPLHLAAYSGNENVVRLLLNSAG
Sbjct: 691 GQADTVRELLTHVPGTVKSDPPTGGALVAELGSESGMTPLHLAAYSGNENVVRLLLNSAG 750

Query: 361 VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
           VQ DA T ENG+NPLHLACFGGH+TVVGLLLSR+A+LL SAD+ GKT LHIAATHGH QM
Sbjct: 751 VQADAATTENGFNPLHLACFGGHITVVGLLLSRSAELLHSADRYGKTGLHIAATHGHYQM 810

Query: 421 VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLAC------- 473
           VEVLLGQGAEINATDK G   +H AAR GH+ ++  L++ G      T NL C       
Sbjct: 811 VEVLLGQGAEINATDKNGWTPLHCAARAGHLDVVKLLVESGASPKSET-NLGCAPIWFAA 869

Query: 474 --GHVTVVGLLLSRAAD 488
             GH  V+  L+ +  D
Sbjct: 870 SEGHNDVLKYLMEKEHD 886

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380011932|ref|XP_003690046.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Apis florea]

 Score =  761 bits (1966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/469 (79%), Positives = 414/469 (88%)

Query: 1    MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
            M+  MS TE+ KALN+Q+++GWTPLLIA +RGHMELV T+L NHARVDVFD EGRSALHL
Sbjct: 624  MISGMSATEVQKALNRQSAVGWTPLLIAAHRGHMELVATLLANHARVDVFDLEGRSALHL 683

Query: 61   AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
            AAEHGYL+VCDALL +KAFINSKSRVGRTALHLAAMNGY+ L +FLV D+ A ID+LTLR
Sbjct: 684  AAEHGYLQVCDALLANKAFINSKSRVGRTALHLAAMNGYSHLVKFLVQDYGAAIDVLTLR 743

Query: 121  KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
            KQTPLHLAA AGQL+VCKLLL+LGASIDATDDQGQKPIH AA NN+ EVAQ+FL+ HPSL
Sbjct: 744  KQTPLHLAAGAGQLEVCKLLLELGASIDATDDQGQKPIHAAAMNNYAEVAQLFLQRHPSL 803

Query: 181  VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
            V A TKDGNTCAHIAAMQGSV VIEELMKFDR GVISARN++TEATPLQLAAEGGHA VV
Sbjct: 804  VMACTKDGNTCAHIAAMQGSVRVIEELMKFDRQGVISARNKLTEATPLQLAAEGGHAEVV 863

Query: 241  RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
            R LV+AGASC DEN+ GFTAVHLAAQ+GH QVLE MRSS++L + SKKLGVTALHVAAYF
Sbjct: 864  RALVRAGASCADENRAGFTAVHLAAQHGHGQVLEVMRSSQSLRISSKKLGVTALHVAAYF 923

Query: 301  GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
            GQADTVRELL+HVPGTVKSDPPTG S +GELGSESGMTPLHLAAYSGNENVVRLLLNSAG
Sbjct: 924  GQADTVRELLTHVPGTVKSDPPTGGSLVGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 983

Query: 361  VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
            VQV+A T ENG+NPLHLACFGGH+TVVGLLLSR+A+LL S+D+ GKT LHIAATHGH QM
Sbjct: 984  VQVEAATTENGFNPLHLACFGGHITVVGLLLSRSAELLHSSDRYGKTGLHIAATHGHYQM 1043

Query: 421  VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
            VEVLLGQGAEINATDK G   +H AAR G++ ++  L++ G      TN
Sbjct: 1044 VEVLLGQGAEINATDKNGWTPLHCAARAGYLDVVKLLVESGASPKSETN 1092

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350403217|ref|XP_003486733.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform 1 [Bombus impatiens]

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/469 (78%), Positives = 414/469 (88%)

Query: 1    MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
            M+  MS TE+ KALN+Q+++GWTPLLIA +RGHMELV T+L NHARVDVFD EGRSALHL
Sbjct: 626  MISGMSATEVQKALNRQSAVGWTPLLIAAHRGHMELVTTLLANHARVDVFDLEGRSALHL 685

Query: 61   AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
            AAEHGYL+VCDALL +KAFINSKSRVGRTALHLAAMNGY+ L +FLV DH A ID+LTLR
Sbjct: 686  AAEHGYLQVCDALLANKAFINSKSRVGRTALHLAAMNGYSHLVKFLVQDHGAAIDVLTLR 745

Query: 121  KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
            KQTPLHLAA AGQL+VCKLLL+LGASIDATDDQGQKPIH AA NN+ EVAQ+FL+ HPSL
Sbjct: 746  KQTPLHLAAGAGQLEVCKLLLELGASIDATDDQGQKPIHAAAMNNYAEVAQLFLQRHPSL 805

Query: 181  VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
            V A TKDGNTCAHIAAMQGSV VIEELMKFDR GVISARN++TEATPLQLAAEGGHA VV
Sbjct: 806  VMACTKDGNTCAHIAAMQGSVRVIEELMKFDRQGVISARNKLTEATPLQLAAEGGHAEVV 865

Query: 241  RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
            + LV+AGASC DEN+ GFTAVHLAAQ+GH QVLE MRSS++L + SKKLGVTALHVAAYF
Sbjct: 866  KALVRAGASCADENRAGFTAVHLAAQHGHGQVLEVMRSSQSLRISSKKLGVTALHVAAYF 925

Query: 301  GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
            GQADTVRELL++VPGTVKSDPPTG S +GELGSESGMTPLHLAAYSGNENVVRLLLNSAG
Sbjct: 926  GQADTVRELLTNVPGTVKSDPPTGGSLVGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 985

Query: 361  VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
            VQV+A T ENG+NPLHLACFGGH+TVVGLLLSR+A+LL S+D+ GKT LHIAATHGH QM
Sbjct: 986  VQVEAATTENGFNPLHLACFGGHITVVGLLLSRSAELLHSSDRYGKTGLHIAATHGHYQM 1045

Query: 421  VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
            VEVLLGQGAEINATDK G   +H AAR G++ ++  L++ G      TN
Sbjct: 1046 VEVLLGQGAEINATDKNGWTPLHCAARAGYLDVVKLLVESGASPKSETN 1094

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340728307|ref|XP_003402467.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform 1 [Bombus terrestris]

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/469 (78%), Positives = 414/469 (88%)

Query: 1    MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
            M+  MS TE+ KALN+Q+++GWTPLLIA +RGHMELV T+L NHARVDVFD EGRSALHL
Sbjct: 626  MISGMSATEVQKALNRQSAVGWTPLLIAAHRGHMELVTTLLANHARVDVFDLEGRSALHL 685

Query: 61   AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
            AAEHGYL+VCDALL +KAFINSKSRVGRTALHLAAMNGY+ L +FLV DH A ID+LTLR
Sbjct: 686  AAEHGYLQVCDALLANKAFINSKSRVGRTALHLAAMNGYSHLVKFLVQDHGAAIDVLTLR 745

Query: 121  KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
            KQTPLHLAA AGQL+VCKLLL+LGASIDATDDQGQKPIH AA NN+ EVAQ+FL+ HPSL
Sbjct: 746  KQTPLHLAAGAGQLEVCKLLLELGASIDATDDQGQKPIHAAAMNNYAEVAQLFLQRHPSL 805

Query: 181  VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
            V A TKDGNTCAHIAAMQGSV VIEELMKFDR GVISARN++TEATPLQLAAEGGHA VV
Sbjct: 806  VMACTKDGNTCAHIAAMQGSVRVIEELMKFDRQGVISARNKLTEATPLQLAAEGGHAEVV 865

Query: 241  RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
            + LV+AGASC DEN+ GFTAVHLAAQ+GH QVLE MRSS++L + SKKLGVTALHVAAYF
Sbjct: 866  KALVRAGASCADENRAGFTAVHLAAQHGHGQVLEVMRSSQSLRISSKKLGVTALHVAAYF 925

Query: 301  GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
            GQADTVRELL++VPGTVKSDPPTG S +GELGSESGMTPLHLAAYSGNENVVRLLLNSAG
Sbjct: 926  GQADTVRELLTNVPGTVKSDPPTGGSLVGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 985

Query: 361  VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
            VQV+A T ENG+NPLHLACFGGH+TVVGLLLSR+A+LL S+D+ GKT LHIAATHGH QM
Sbjct: 986  VQVEAATTENGFNPLHLACFGGHITVVGLLLSRSAELLHSSDRYGKTGLHIAATHGHYQM 1045

Query: 421  VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
            VEVLLGQGAEINATDK G   +H AAR G++ ++  L++ G      TN
Sbjct: 1046 VEVLLGQGAEINATDKNGWTPLHCAARAGYLDVVKLLVESGASPKSETN 1094

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020535|gb|EGI60950.1| Ankyrin-1 [Acromyrmex echinatior]

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/497 (75%), Positives = 422/497 (84%), Gaps = 10/497 (2%)

Query: 1    MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
            M+ +MS TE+ KALN+Q+++GWTPLLIA +RGHMELV T+L NH RVDVFD EGRSALHL
Sbjct: 646  MISRMSATEVQKALNRQSAVGWTPLLIAAHRGHMELVTTLLANHGRVDVFDLEGRSALHL 705

Query: 61   AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
            AAEHGYL+VCDALL +KAFINSKSRVGRTALHLAAMNGY  L RFLV DH A ID+LTLR
Sbjct: 706  AAEHGYLQVCDALLANKAFINSKSRVGRTALHLAAMNGYTHLVRFLVQDHGAAIDVLTLR 765

Query: 121  KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
            KQTPLHLAA AGQL+VCKLLL+LGASIDATDDQGQKPIH AA NN+ EVAQ+FL+ H SL
Sbjct: 766  KQTPLHLAAGAGQLEVCKLLLELGASIDATDDQGQKPIHAAAMNNYAEVAQLFLQRHASL 825

Query: 181  VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
            V A TKDGNTCAHIAAMQGSV VIEELMKFDR GVI+ARN++TEATPLQLAAEGGHA VV
Sbjct: 826  VMACTKDGNTCAHIAAMQGSVRVIEELMKFDRQGVITARNKLTEATPLQLAAEGGHAEVV 885

Query: 241  RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
            + LV+AGASC DEN+ GFTAVHLAAQ+GH QVLE MRSS++L + SKKLGVTALHVAAYF
Sbjct: 886  KALVRAGASCADENRAGFTAVHLAAQHGHGQVLEVMRSSQSLRISSKKLGVTALHVAAYF 945

Query: 301  GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
            GQADTVRELL+H+PGTVKSDPPTG S +GELG+ESGMTPLHLAAYSGNENVVRLLLNSAG
Sbjct: 946  GQADTVRELLTHIPGTVKSDPPTGGSLVGELGAESGMTPLHLAAYSGNENVVRLLLNSAG 1005

Query: 361  VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
            VQVDA T ENG+NPLHLACFGGH+TVVGLLLSR+A+LL S+D+ GKT LHIAATHGH QM
Sbjct: 1006 VQVDAATTENGWNPLHLACFGGHITVVGLLLSRSAELLHSSDRYGKTGLHIAATHGHYQM 1065

Query: 421  VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLAC------- 473
            VEVLLGQGAEINATDK G   +H AAR GH+ ++  L++ G      T NL C       
Sbjct: 1066 VEVLLGQGAEINATDKNGWTPLHCAARAGHLDVVKLLVESGGSPKTET-NLGCAPIWFAA 1124

Query: 474  --GHVTVVGLLLSRAAD 488
              GH  V+  L+ +  D
Sbjct: 1125 SEGHNDVLKYLMEKEHD 1141

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307185525|gb|EFN71501.1| Ankyrin-1 [Camponotus floridanus]

 Score =  760 bits (1963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/497 (75%), Positives = 422/497 (84%), Gaps = 10/497 (2%)

Query: 1    MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
            M+ +MS T++ KALN+Q ++GWTPLLIA NRGHMELV T+L NH RVDVFD EGRSALHL
Sbjct: 592  MISRMSSTDVQKALNRQNAVGWTPLLIASNRGHMELVTTLLANHGRVDVFDLEGRSALHL 651

Query: 61   AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
            AAEHGYL+VCDALL +KAFINSKSRVGRTALHLAAMNGY  L RFL+ DH A ID+LTLR
Sbjct: 652  AAEHGYLQVCDALLANKAFINSKSRVGRTALHLAAMNGYTHLVRFLIQDHGAAIDVLTLR 711

Query: 121  KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
            KQTPLHLAA AGQL+VCKLLLDLGA+IDATDDQGQKPIH AA NNF EV Q+FL+ HPSL
Sbjct: 712  KQTPLHLAAGAGQLEVCKLLLDLGANIDATDDQGQKPIHAAAMNNFAEVVQLFLQRHPSL 771

Query: 181  VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
            V A TKDGNTCAHIAAMQGSV VIEELMKFDR GVI+ARN++T+ATPLQLAAEGGHA VV
Sbjct: 772  VMACTKDGNTCAHIAAMQGSVRVIEELMKFDRQGVITARNKLTDATPLQLAAEGGHAEVV 831

Query: 241  RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
            +VLV+AGASC+DEN+ GFTAVHLAA+ GH QVLE MRSS++L + SKKLGVTALHVAAYF
Sbjct: 832  KVLVRAGASCSDENRAGFTAVHLAAEYGHGQVLEVMRSSQSLRIVSKKLGVTALHVAAYF 891

Query: 301  GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
            GQADTVRELL+H+PGTVKSDPPTG S +GELG+ESGMTPLHLAAYSGNENVVRLLLNSAG
Sbjct: 892  GQADTVRELLTHIPGTVKSDPPTGGSLVGELGAESGMTPLHLAAYSGNENVVRLLLNSAG 951

Query: 361  VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
            VQVDA T ENG+NPLHLACFGGH+TVVGLLLSR+A+LL SAD+ GKT LHIAATHGH QM
Sbjct: 952  VQVDAATTENGWNPLHLACFGGHITVVGLLLSRSAELLHSADRYGKTGLHIAATHGHYQM 1011

Query: 421  VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLAC------- 473
            VEVLLGQGAEINATDK G   +H A+R G++ ++  L++ G      T NL C       
Sbjct: 1012 VEVLLGQGAEINATDKNGWTPLHCASRAGYLDVVRLLVESGASPKSET-NLGCAPIWFAA 1070

Query: 474  --GHVTVVGLLLSRAAD 488
              GH  V+  L+ +  D
Sbjct: 1071 SEGHNDVLKYLMEKEHD 1087

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	1015
FB|FBgn0016920	1726	nompC "no mechanoreceptor pote	0.520	0.305	0.677	6.3e-258
ZFIN|ZDB-GENE-030728-7	1614	trpn1 "transient receptor pote	0.454	0.285	0.529	1.5e-162
WB|WBGene00006616	1924	trp-4 [Caenorhabditis elegans	0.448	0.236	0.473	3e-146
MGI|MGI:88026	1961	Ank3 "ankyrin 3, epithelial" [	0.592	0.306	0.311	4.1e-62
UNIPROTKB|F1PJ90	1782	ANK3 "Uncharacterized protein"	0.591	0.336	0.315	4.5e-62
RGD|620156	843	Ank2 "ankyrin 2, neuronal" [Ra	0.595	0.716	0.307	1.5e-61
UNIPROTKB|Q12955	4377	ANK3 "Ankyrin-3" [Homo sapiens	0.591	0.137	0.314	3.8e-61
UNIPROTKB|F1NJ80	1699	ANK3 "Uncharacterized protein"	0.583	0.348	0.303	9.2e-61
UNIPROTKB|F1NNX8	1737	ANK3 "Uncharacterized protein"	0.583	0.340	0.303	9.6e-61
UNIPROTKB|F1NNX6	1824	ANK3 "Uncharacterized protein"	0.583	0.324	0.303	1.1e-60

FB|FBgn0016920 nompC "no mechanoreceptor potential C" [Drosophila melanogaster (taxid:7227)]

 Score = 1859 (659.5 bits), Expect = 6.3e-258, Sum P(2) = 6.3e-258
 Identities = 366/540 (67%), Positives = 439/540 (81%)

Query:     1 MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
             M+  M+ T+I KA+N+Q+S+GWTPLLIAC+RGHMELVN +L NHARVDVFD EGRSALHL
Sbjct:   640 MISHMNPTDIQKAMNRQSSVGWTPLLIACHRGHMELVNNLLANHARVDVFDTEGRSALHL 699

Query:    61 AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
             AAE GYL VCDALLT+KAFINSKSRVGRTALHLAAMNG+  L +FL+ DH AVIDILTLR
Sbjct:   700 AAERGYLHVCDALLTNKAFINSKSRVGRTALHLAAMNGFTHLVKFLIKDHNAVIDILTLR 759

Query:   121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
             KQTPLHLAA +GQ++VC+LLL+LGA+IDATDD GQKPIHVAAQNN+ EVA++FL+ HPSL
Sbjct:   760 KQTPLHLAAASGQMEVCQLLLELGANIDATDDLGQKPIHVAAQNNYSEVAKLFLQQHPSL 819

Query:   181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
             V AT+KDGNTCAHIAAMQGSV VIEELMKFDRSGVISARN++T+ATPLQLAAEGGHA+VV
Sbjct:   820 VNATSKDGNTCAHIAAMQGSVKVIEELMKFDRSGVISARNKLTDATPLQLAAEGGHADVV 879

Query:   241 RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
             + LV+AGASCT+ENK GFTAVHLAAQNGH QVL+ ++S+ +L + SKKLG+T LHVAAY+
Sbjct:   880 KALVRAGASCTEENKAGFTAVHLAAQNGHGQVLDVLKSTNSLRINSKKLGLTPLHVAAYY 939

Query:   301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
             GQADTVRELL+ VP TVKS+ PTG S  G+LG+ESGMTPLHLAA+SGNENVVRLLLNSAG
Sbjct:   940 GQADTVRELLTSVPATVKSETPTGQSLFGDLGTESGMTPLHLAAFSGNENVVRLLLNSAG 999

Query:   361 VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
             VQVDA T ENGYNPLHLACFGGH++VVGLLLSR+A+LLQS D+NG+T LHIAA HGH+QM
Sbjct:  1000 VQVDAATIENGYNPLHLACFGGHMSVVGLLLSRSAELLQSQDRNGRTGLHIAAMHGHIQM 1059

Query:   421 VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLAC------- 473
             VE+LLGQGAEINATD+ G   +H AA+ GH+ ++  L + G      TN   C       
Sbjct:  1060 VEILLGQGAEINATDRNGWTPLHCAAKAGHLEVVKLLCEAGASPKSETN-YGCAAIWFAA 1118

Query:   474 --GHVTVVGLLLSRAADL--LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKV 529
               GH  V+  L+++  D   L    +     + ++  H +  + E +L   A ++   K+
Sbjct:  1119 SEGHNEVLRYLMNKEHDTYGLMEDKRFVYNLMVVSKNHNNKPIQEFVLVSPAPVDTAAKL 1178

GO:0005262 "calcium channel activity" evidence=IEA;ISS

GO:0006816 "calcium ion transport" evidence=ISS

GO:0007638 "mechanosensory behavior" evidence=IMP

GO:0005216 "ion channel activity" evidence=ISS

GO:0008381 "mechanically-gated ion channel activity" evidence=NAS;TAS

GO:0050954 "sensory perception of mechanical stimulus" evidence=NAS

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0008092 "cytoskeletal protein binding" evidence=ISS

GO:0030506 "ankyrin binding" evidence=NAS

GO:0050974 "detection of mechanical stimulus involved in sensory perception" evidence=TAS

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005929 "cilium" evidence=IDA

GO:0040011 "locomotion" evidence=IMP

GO:0050975 "sensory perception of touch" evidence=IMP

ZFIN|ZDB-GENE-030728-7 trpn1 "transient receptor potential cation channel, subfamily N, member 1" [Danio rerio (taxid:7955)]

 Score = 1234 (439.4 bits), Expect = 1.5e-162, Sum P(2) = 1.5e-162
 Identities = 246/465 (52%), Positives = 329/465 (70%)

Query:     1 MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
             ML  +   +I  A+NK +  GW+PLL+A ++GH E+V  +L N+ARVDVFD+EG++A+HL
Sbjct:   559 MLRNVPTNQIQTAINKHSKNGWSPLLLAADQGHTEVVKILLQNNARVDVFDEEGKAAIHL 618

Query:    61 AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
             AA+ G+  + D LL+ KAF+N+K++ G T LHL+A NG A L R LV +H A +D L+LR
Sbjct:   619 AAQRGHQDIVDVLLSQKAFVNAKTKQGLTPLHLSAQNGSARLVRLLVENHQASVDALSLR 678

Query:   121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
             KQTPLHLAA +GQL VC  LL+L A I ATD +GQ P+H+AA+++  EV ++FLR  P L
Sbjct:   679 KQTPLHLAAMSGQLDVCSSLLNLRADITATDSRGQTPLHLAAESDHSEVVKLFLRLRPEL 738

Query:   181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
              T   +DG+TC HIAA +GSV VI EL+ F++ GV +  ++     PL LAA GGHA VV
Sbjct:   739 STLANEDGSTCTHIAAAKGSVSVIRELLMFNQGGVGTLNHKAHGLCPLHLAAAGGHAEVV 798

Query:   241 RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
             +VL++AGAS T+E+  G TAVHLAA++GH  +LE +R S  L + S K G TALHVAA F
Sbjct:   799 KVLLEAGASVTEEDAEGMTAVHLAAKHGHTHILEVLRGSVPLKIQSSKTGFTALHVAASF 858

Query:   301 GQADTVRELLSHVPGTVKSDPPT--GASFLGELG--SESGMTPLHLAAYSGNENVVRLLL 356
             GQ + VRE+L+ VP T++S+ PT  G   +      +ESG TPLHLA+ SG+E+VVRLLL
Sbjct:   859 GQMNFVREILTKVPATIRSEFPTISGKDDIKRQQPLAESGFTPLHLASQSGHESVVRLLL 918

Query:   357 NSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG 416
             N  GVQ DA+T   G +PLHLA   GH  VVGLLLSR++ LL  AD+ G++ LH+AA HG
Sbjct:   919 NCPGVQADAETNIQGSSPLHLAAQSGHTAVVGLLLSRSSSLLHQADRRGRSALHLAAAHG 978

Query:   417 HLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
             H+ MV VLLGQGAEIN TD  G  ++H AA  G + ++  L++ G
Sbjct:   979 HVDMVRVLLGQGAEINHTDMSGWTALHYAAEAGCLEVLLFLVESG 1023

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

GO:0008381 "mechanically-gated ion channel activity" evidence=ISS

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0050910 "detection of mechanical stimulus involved in sensory perception of sound" evidence=IMP

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00006616 trp-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 1097 (391.2 bits), Expect = 3.0e-146, Sum P(2) = 3.0e-146
 Identities = 219/463 (47%), Positives = 309/463 (66%)

Query:     1 MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
             M+ ++    +    NKQ+  GW+PLL AC RGH  + N +L +HAR+DVFD+ GR+ALHL
Sbjct:   867 MVNKIGAGAVQIVQNKQSKNGWSPLLEACARGHSGVANILLKHHARIDVFDEMGRTALHL 926

Query:    61 AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
             AA +G+L +   LL HKAF+NSKS+ G   LHLAA +G+  +   LV DH A ++ +TL 
Sbjct:   927 AAFNGHLSLVHLLLQHKAFVNSKSKTGEAPLHLAAQHGHVKVVNVLVQDHGAALEAITLD 986

Query:   121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA---H 177
              QT LH AA+ GQL V + LL LGA+ +A DD+GQ P+H+AA+N+FP+V ++FL+    +
Sbjct:   987 NQTALHFAAKFGQLAVSQTLLALGANPNARDDKGQTPLHLAAENDFPDVVKLFLKMRNNN 1046

Query:   178 PSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHA 237
              S++TA   +G TCAHIAAM+GS+ V+ ELM  D+  VI A+ +  EAT L +AA GGHA
Sbjct:  1047 RSVLTAIDHNGFTCAHIAAMKGSLAVVRELMMIDKPMVIQAKTKTLEATTLHMAAAGGHA 1106

Query:   238 NVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKAL-NVYSKKLGVTALHV 296
             N+V++L++ GA+  DEN  G TA+HL A+NG   +LE     K L    S+K G+ ALH+
Sbjct:  1107 NIVKILLENGANAEDENSHGMTALHLGAKNGFISILEAF--DKILWKRCSRKTGLNALHI 1164

Query:   297 AAYFGQADTVRELLSHVPGTVKSDPPTGASFLG-ELGSESGMTPLHLAAYSGNENVVRLL 355
             AA++G +D V E+L HV  TV+S+PP     +  E  +E G TPLHLAA SG++++VR+L
Sbjct:  1165 AAFYGNSDFVNEMLKHVQATVRSEPPIYNHHVNKEFSTEYGFTPLHLAAQSGHDSLVRML 1224

Query:   356 LNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH 415
             LN  GVQVDA +      PLHLA   GH+ VVG+LLSR+     + D  G+T LH+AA +
Sbjct:  1225 LNQ-GVQVDATSTTMNVIPLHLAAQQGHIAVVGMLLSRSTQQQHAKDWRGRTPLHLAAQN 1283

Query:   416 GHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLL 458
             GH +MV +L+ QG+ IN  D+ G   +H A R GH+ ++   +
Sbjct:  1284 GHYEMVSLLIAQGSNINVMDQNGWTGLHFATRAGHLSVVKLFI 1326

GO:0005262 "calcium channel activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:88026 Ank3 "ankyrin 3, epithelial" [Mus musculus (taxid:10090)]

 Score = 667 (239.9 bits), Expect = 4.1e-62, P = 4.1e-62
 Identities = 206/661 (31%), Positives = 320/661 (48%)

Query:    14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
             +N Q+  G+TPL +A    H+E+V  +L+N A   +  ++G + L +A + G+ +V   L
Sbjct:   116 VNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLL 175

Query:    74 LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
             L +    ++K +V   ALH+AA          L+ +     D+ +    TPLH+AA  G 
Sbjct:   176 LEN----DTKGKVRLPALHIAARKDDTKAAALLLQNDTNA-DVESKSGFTPLHIAAHYGN 230

Query:   134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAH 193
             + V  LLL+  A++D T      P+HVA++     + ++ L    + + A T+DG T  H
Sbjct:   231 INVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLD-RGAKIDAKTRDGLTPLH 289

Query:   194 IAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDE 253
               A  G   V+E L+  DRS  I ++ +    +PL +A +G H N V++L++      D 
Sbjct:   290 CGARSGHEQVVEMLL--DRSAPILSKTK-NGLSPLHMATQGDHLNCVQLLLQHNVPVDDV 346

Query:   254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKL-GVTALHVAAYFGQADTVRELLSH 312
                  TA+H+AA  GH +V + +   KA +  +K L G T LH+A    +   +  LL H
Sbjct:   347 TNDYLTALHVAAHCGHYKVAKVLLDKKA-SPNAKALNGFTPLHIACKKNRIRVMELLLKH 405

Query:   313 ---VPGTVKSD--PPTGASFLGELGSES---------------GMTPLHLAAYSGNENVV 352
                +    +S   P   A+F+G +   S               G T LH+AA SG   VV
Sbjct:   406 GASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVV 465

Query:   353 RLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIA 412
             R L+   G QV+A+ +++   PLH++   G   +V  LL + A    +A  +G T LH+A
Sbjct:   466 RYLVQD-GAQVEAKAKDD-QTPLHISARLGKADIVQQLLQQGASP-NAATTSGYTPLHLA 522

Query:   413 ATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVT-TNNL 471
             A  GH  +   LL  GA ++ T K G   +H AA+YG + + + LLQK    D    + L
Sbjct:   523 AREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGL 582

Query:   472 ACGHVTV------VGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 525
                HV        V LLL        +A KNG T LHIAA    + +   LL  GA+ NA
Sbjct:   583 TPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANA 642

Query:   526 TDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 585
                               +R G  ++HLAA  G+ D+   L+  +A V ++      TPL
Sbjct:   643 V-----------------TRQGIASVHLAAQEGHVDMVSLLLSRNANV-NLSNKSGLTPL 684

Query:   586 HLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATT 645
             HLAA+  ++ V ++L++ GA +DA    G  P+HV       ++   FL  H + V A T
Sbjct:   685 HLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVN-FLLQHSAKVNAKT 743

Query:   646 K 646
             K
Sbjct:   744 K 744

GO:0000281 "cytokinesis after mitosis" evidence=ISO

GO:0005200 "structural constituent of cytoskeleton" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0007009 "plasma membrane organization" evidence=ISO

GO:0007165 "signal transduction" evidence=IEA

GO:0007409 "axonogenesis" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

GO:0010650 "positive regulation of cell communication by electrical coupling" evidence=ISO

GO:0014704 "intercalated disc" evidence=ISO;IDA

GO:0016020 "membrane" evidence=IDA

GO:0016323 "basolateral plasma membrane" evidence=ISO

GO:0016328 "lateral plasma membrane" evidence=ISO

GO:0016529 "sarcoplasmic reticulum" evidence=ISO

GO:0019228 "regulation of action potential in neuron" evidence=IMP

GO:0030018 "Z disc" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0030424 "axon" evidence=IDA

GO:0030425 "dendrite" evidence=ISO

GO:0031594 "neuromuscular junction" evidence=ISO

GO:0033268 "node of Ranvier" evidence=ISO;IDA

GO:0033270 "paranode region of axon" evidence=IDA

GO:0034112 "positive regulation of homotypic cell-cell adhesion" evidence=ISO

GO:0042383 "sarcolemma" evidence=ISO

GO:0043001 "Golgi to plasma membrane protein transport" evidence=ISO

GO:0043005 "neuron projection" evidence=ISO

GO:0043194 "axon initial segment" evidence=ISO;IDA

GO:0045184 "establishment of protein localization" evidence=ISO

GO:0045202 "synapse" evidence=IDA

GO:0045211 "postsynaptic membrane" evidence=ISO

GO:0045760 "positive regulation of action potential" evidence=TAS

GO:0050808 "synapse organization" evidence=IMP

GO:0071709 "membrane assembly" evidence=ISO

GO:0072659 "protein localization to plasma membrane" evidence=ISO;IDA;IMP

GO:0072660 "maintenance of protein location in plasma membrane" evidence=ISO

GO:0072661 "protein targeting to plasma membrane" evidence=ISO;IMP

GO:0090314 "positive regulation of protein targeting to membrane" evidence=ISO

UNIPROTKB|F1PJ90 ANK3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 677 (243.4 bits), Expect = 4.5e-62, Sum P(2) = 4.5e-62
 Identities = 209/662 (31%), Positives = 324/662 (48%)

Query:    14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
             +N Q+  G+TPL +A    H+E+V  +L+N A   +  ++G + L +A + G+ +V   L
Sbjct:   133 VNAQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLL 192

Query:    74 LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV-HDHAAVIDILTLRKQTPLHLAAEAG 132
             L +    ++K +V   ALH+AA          L+ +D+ A  DI +    TPLH+AA  G
Sbjct:   193 LEN----DTKGKVRLPALHIAARKDDTKAAALLLQNDNNA--DIESKSGFTPLHIAAHYG 246

Query:   133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCA 192
              + V  LLL+  A++D T      P+HVA++     + ++ L    + + A T+DG T  
Sbjct:   247 NINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLD-RGAKIDAKTRDGLTPL 305

Query:   193 HIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD 252
             H  A  G   V+E L+  DR+  I ++ +    +PL +A +G H N V++L++      D
Sbjct:   306 HCGARSGHEQVVEMLL--DRAAPILSKTK-NGLSPLHMATQGDHLNCVQLLLQHNVPVDD 362

Query:   253 ENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKL-GVTALHVAAYFGQADTVRELLS 311
                   TA+H+AA  GH +V + +   KA N  +K L G T LH+A    +   +  LL 
Sbjct:   363 VTNDYLTALHVAAHCGHYKVAKVLLDKKA-NPNAKALNGFTPLHIACKKNRIKVMELLLK 421

Query:   312 H---VPGTVKSD--PPTGASFLGELGSES---------------GMTPLHLAAYSGNENV 351
             H   +    +S   P   A+F+G +   S               G T LH+AA SG   V
Sbjct:   422 HGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEV 481

Query:   352 VRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHI 411
             VR L+   G QV+A+ +++   PLH++   G   +V  LL + A    +A  +G T LH+
Sbjct:   482 VRYLVQD-GAQVEAKAKDD-QTPLHISARLGKADIVQQLLQQGASP-NAATTSGYTPLHL 538

Query:   412 AATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVT-TNN 470
             +A  GH  +   LL  GA ++ T K G   +H AA+YG + + N LLQK    D    + 
Sbjct:   539 SAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSG 598

Query:   471 LACGHVTV------VGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
             L   HV        V LLL        +A KNG T LHIAA    + +   LL  GA+ N
Sbjct:   599 LTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEYGADAN 658

Query:   525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTP 584
             A                  +R G  ++HLAA  G+ D+   L+  +A V ++      TP
Sbjct:   659 AV-----------------TRQGIASVHLAAQEGHVDMVSLLLGRNANV-NLSNKSGLTP 700

Query:   585 LHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTAT 644
             LHLAA+  ++ V ++L++ GA++DA    G  P+HV       ++   FL  H + V A 
Sbjct:   701 LHLAAQEDRVNVAEVLVNQGANVDAQTKMGYTPLHVGCHYGNIKIVN-FLLQHSAKVNAR 759

Query:   645 TK 646
             TK
Sbjct:   760 TK 761

GO:0007165 "signal transduction" evidence=IEA

RGD|620156 Ank2 "ankyrin 2, neuronal" [Rattus norvegicus (taxid:10116)]

 Score = 635 (228.6 bits), Expect = 1.5e-61, P = 1.5e-61
 Identities = 204/663 (30%), Positives = 330/663 (49%)

Query:    14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
             +N     G   L +A   GH+ LV  +L   + VD   ++G +ALH+A+  G  +V   L
Sbjct:    22 INTCNQNGLNALHLAAKEGHVGLVQELLGRGSSVDSATKKGNTALHIASLAGQAEVVKVL 81

Query:    74 LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
             +   A IN++S+ G T L++AA   + D+ ++L+ ++ A     T    TPL +A + G 
Sbjct:    82 VKEGANINAQSQNGFTPLYMAAQENHIDVVKYLL-ENGANQSTATEDGFTPLAVALQQGH 140

Query:   134 LQVCKLLLDLGASIDATDDQGQKP-IHVAAQNNFPEVAQIFLRA-HPS------LVTATT 185
              Q   +LL+     + T  + + P +H+AA+ +  + A + L+  H +      +V  TT
Sbjct:   141 NQAVAILLE-----NDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTT 195

Query:   186 KDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVK 245
             + G T  HIAA  G+V V   L+    +   +ARN +T   PL +A++ G+ N+V++L+ 
Sbjct:   196 ESGFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGIT---PLHVASKRGNTNMVKLLLD 252

Query:   246 AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADT 305
              G     + + G T +H AA++GH+QV+E +    A  +   K G++ LH+AA     + 
Sbjct:   253 RGGQIDAKTRDGLTPLHCAARSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHVEC 312

Query:   306 VRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDA 365
             V+ LL H     K+  P     L  L      T LH+AA+ G+  V +LLL+      +A
Sbjct:   313 VKHLLQH-----KA--PVDDVTLDYL------TALHVAAHCGHYRVTKLLLDKRA-NPNA 358

Query:   366 QTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 425
             +   NG+ PLH+AC    + V+ LL+   A  +Q+  ++G T + +AA  GHL +V +LL
Sbjct:   359 RAL-NGFTPLHIACKKNRIKVMELLVKYGA-YIQAITESGLTPIPVAAFMGHLNIVLLLL 416

Query:   426 GQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDV------TTNNLAC--GHVT 477
               GA  + T+  G  ++H AAR G V ++  LL+ G  VD       T  ++A   G   
Sbjct:   417 QNGASPDVTNIRGETALHMAARAGEVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTE 476

Query:   478 VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN-ATDK-------- 528
             +V LLL   A    +A  NG T LHI+A  G + +  VLL  GA  + AT K        
Sbjct:   477 IVQLLLQHMAHP-DAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVA 535

Query:   529 -------VCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK 581
                    V   LL  +A  +S  + G T LH+AA      +   L+   A+         
Sbjct:   536 AKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQKVALLLLEKGASP-HATAKNG 594

Query:   582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 641
              TPLH+AA+  Q+Q+   LL+ GA  +    QG  P+H+A+Q    ++  + L    ++ 
Sbjct:   595 YTPLHIAAKKNQMQIASTLLNYGAETNTVTKQGVTPLHLASQEGHTDMVTLVLEKGANIH 654

Query:   642 TAT 644
              +T
Sbjct:   655 MST 657

GO:0002027 "regulation of heart rate" evidence=ISO

GO:0003283 "atrial septum development" evidence=ISO

GO:0005200 "structural constituent of cytoskeleton" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0006874 "cellular calcium ion homeostasis" evidence=ISO

GO:0007399 "nervous system development" evidence=IEP

GO:0008104 "protein localization" evidence=ISO

GO:0010628 "positive regulation of gene expression" evidence=ISO

GO:0010881 "regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion" evidence=ISO

GO:0010882 "regulation of cardiac muscle contraction by calcium ion signaling" evidence=ISO

GO:0014704 "intercalated disc" evidence=ISO

GO:0015459 "potassium channel regulator activity" evidence=ISO

GO:0016323 "basolateral plasma membrane" evidence=ISO

GO:0019899 "enzyme binding" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO

GO:0030018 "Z disc" evidence=ISO

GO:0030315 "T-tubule" evidence=ISO

GO:0030507 "spectrin binding" evidence=ISO

GO:0030674 "protein binding, bridging" evidence=ISO

GO:0030913 "paranodal junction assembly" evidence=IEP

GO:0031430 "M band" evidence=ISO

GO:0031672 "A band" evidence=ISO

GO:0033292 "T-tubule organization" evidence=ISO

GO:0033365 "protein localization to organelle" evidence=ISO

GO:0034394 "protein localization to cell surface" evidence=ISO

GO:0034613 "cellular protein localization" evidence=ISO

GO:0042383 "sarcolemma" evidence=ISO

GO:0043005 "neuron projection" evidence=IDA

GO:0043034 "costamere" evidence=ISO

GO:0043268 "positive regulation of potassium ion transport" evidence=ISO

GO:0044325 "ion channel binding" evidence=ISO

GO:0045121 "membrane raft" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0050821 "protein stabilization" evidence=ISO

GO:0051117 "ATPase binding" evidence=ISO

GO:0051279 "regulation of release of sequestered calcium ion into cytosol" evidence=ISO

GO:0051597 "response to methylmercury" evidence=IEP

GO:0051924 "regulation of calcium ion transport" evidence=ISO

GO:0051928 "positive regulation of calcium ion transport" evidence=ISO

GO:0055117 "regulation of cardiac muscle contraction" evidence=ISO

GO:0060048 "cardiac muscle contraction" evidence=ISO

GO:0060307 "regulation of ventricular cardiac muscle cell membrane repolarization" evidence=ISO

GO:0070972 "protein localization to endoplasmic reticulum" evidence=ISO

GO:0072659 "protein localization to plasma membrane" evidence=ISO

GO:0072661 "protein targeting to plasma membrane" evidence=ISO

GO:0086004 "regulation of cardiac muscle cell contraction" evidence=ISO

GO:0086005 "regulation of ventricular cardiac muscle cell action potential" evidence=ISO

GO:0086014 "regulation of atrial cardiac muscle cell action potential" evidence=ISO

GO:0086015 "regulation of SA node cell action potential" evidence=ISO

GO:0086036 "regulation of cardiac muscle cell membrane potential" evidence=ISO

GO:0086066 "atrial cardiac muscle cell to AV node cell communication" evidence=ISO

GO:0086070 "SA node cell to atrial cardiac muscle cell communication" evidence=ISO

GO:0086091 "regulation of heart rate by cardiac conduction" evidence=ISO

GO:1901018 "positive regulation of potassium ion transmembrane transporter activity" evidence=ISO

GO:1901019 "regulation of calcium ion transmembrane transporter activity" evidence=ISO

GO:1901021 "positive regulation of calcium ion transmembrane transporter activity" evidence=ISO

GO:2001257 "regulation of cation channel activity" evidence=ISO

GO:2001259 "positive regulation of cation channel activity" evidence=ISO

UNIPROTKB|Q12955 ANK3 "Ankyrin-3" [Homo sapiens (taxid:9606)]

 Score = 674 (242.3 bits), Expect = 3.8e-61, Sum P(2) = 3.8e-61
 Identities = 208/662 (31%), Positives = 323/662 (48%)

Query:    14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
             +N Q+  G+TPL +A    H+E+V  +L+N A   +  ++G + L +A + G+ +V   L
Sbjct:   133 VNAQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLL 192

Query:    74 LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV-HDHAAVIDILTLRKQTPLHLAAEAG 132
             L +    ++K +V   ALH+AA          L+ +D+ A  D+ +    TPLH+AA  G
Sbjct:   193 LEN----DTKGKVRLPALHIAARKDDTKAAALLLQNDNNA--DVESKSGFTPLHIAAHYG 246

Query:   133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCA 192
              + V  LLL+  A++D T      P+HVA++     + ++ L    + + A T+DG T  
Sbjct:   247 NINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLD-RGAKIDAKTRDGLTPL 305

Query:   193 HIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD 252
             H  A  G   V+E L+  DR+  I ++ +    +PL +A +G H N V++L++      D
Sbjct:   306 HCGARSGHEQVVEMLL--DRAAPILSKTK-NGLSPLHMATQGDHLNCVQLLLQHNVPVDD 362

Query:   253 ENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKL-GVTALHVAAYFGQADTVRELLS 311
                   TA+H+AA  GH +V + +   KA N  +K L G T LH+A    +   +  LL 
Sbjct:   363 VTNDYLTALHVAAHCGHYKVAKVLLDKKA-NPNAKALNGFTPLHIACKKNRIKVMELLLK 421

Query:   312 H---VPGTVKSD--PPTGASFLGELGSES---------------GMTPLHLAAYSGNENV 351
             H   +    +S   P   A+F+G +   S               G T LH+AA SG   V
Sbjct:   422 HGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEV 481

Query:   352 VRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHI 411
             VR L+   G QV+A+ +++   PLH++   G   +V  LL + A    +A  +G T LH+
Sbjct:   482 VRYLVQD-GAQVEAKAKDD-QTPLHISARLGKADIVQQLLQQGASP-NAATTSGYTPLHL 538

Query:   412 AATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVT-TNN 470
             +A  GH  +   LL  GA ++ T K G   +H AA+YG + + N LLQK    D    + 
Sbjct:   539 SAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSG 598

Query:   471 LACGHVTV------VGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
             L   HV        V LLL        +A KNG T LHIAA    + +   LL  GA+ N
Sbjct:   599 LTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEYGADAN 658

Query:   525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTP 584
             A                  +R G  ++HLAA  G+ D+   L+  +A V ++      TP
Sbjct:   659 AV-----------------TRQGIASVHLAAQEGHVDMVSLLLGRNANV-NLSNKSGLTP 700

Query:   585 LHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTAT 644
             LHLAA+  ++ V ++L++ GA +DA    G  P+HV       ++   FL  H + V A 
Sbjct:   701 LHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVN-FLLQHSAKVNAK 759

Query:   645 TK 646
             TK
Sbjct:   760 TK 761

GO:0007165 "signal transduction" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0050808 "synapse organization" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IDA

GO:0045184 "establishment of protein localization" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0042383 "sarcolemma" evidence=IDA

GO:0009925 "basal plasma membrane" evidence=IDA

GO:0008092 "cytoskeletal protein binding" evidence=ISS

GO:0009986 "cell surface" evidence=ISS

GO:0043034 "costamere" evidence=TAS

GO:0072659 "protein localization to plasma membrane" evidence=IGI;IMP

GO:1900827 "positive regulation of membrane depolarization involved in regulation of cardiac muscle cell action potential" evidence=ISS

GO:0010765 "positive regulation of sodium ion transport" evidence=ISS

GO:0045838 "positive regulation of membrane potential" evidence=ISS

GO:0010628 "positive regulation of gene expression" evidence=ISS

GO:2000651 "positive regulation of sodium ion transmembrane transporter activity" evidence=ISS

GO:0016328 "lateral plasma membrane" evidence=IDA

GO:0005923 "tight junction" evidence=IDA

GO:0071709 "membrane assembly" evidence=IMP

GO:0000281 "cytokinesis after mitosis" evidence=IMP

GO:0007009 "plasma membrane organization" evidence=IMP

GO:0072660 "maintenance of protein location in plasma membrane" evidence=IGI

GO:0005200 "structural constituent of cytoskeleton" evidence=IMP

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IMP

GO:0072661 "protein targeting to plasma membrane" evidence=IMP

GO:0030507 "spectrin binding" evidence=ISS

GO:0044325 "ion channel binding" evidence=ISS

GO:0045296 "cadherin binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0014704 "intercalated disc" evidence=ISS

GO:0014731 "spectrin-associated cytoskeleton" evidence=ISS

GO:0030315 "T-tubule" evidence=ISS

GO:0030674 "protein binding, bridging" evidence=ISS

GO:0043266 "regulation of potassium ion transport" evidence=ISS

GO:0043194 "axon initial segment" evidence=ISS

GO:0033268 "node of Ranvier" evidence=ISS

GO:0007409 "axonogenesis" evidence=ISS

GO:0019228 "regulation of action potential in neuron" evidence=ISS

UNIPROTKB|F1NJ80 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 654 (235.3 bits), Expect = 9.2e-61, P = 9.2e-61
 Identities = 200/659 (30%), Positives = 328/659 (49%)

Query:     6 SGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHG 65
             SG +I+  ++ Q   G   L +A   GH+E+V+ ++   A VD   ++G +ALH+A+  G
Sbjct:    21 SGVDIN--ISNQN--GLNALHLASKEGHVEVVSELIQRGASVDAATKKGNTALHIASLAG 76

Query:    66 YLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 125
               +V   L+T++A +N++S+ G T L++AA   + ++ +FL+ D+ A   + T    TPL
Sbjct:    77 QAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEVVKFLL-DNGASQSLATEDGFTPL 135

Query:   126 HLAAEAGQLQVCKLLLDLGASIDATDDQGQKP-IHVAAQNNFPEVAQIFLRAHPSLVTAT 184
              +A + G  QV  LLL+     + T  + + P +H+AA+ +  + A + L+   +     
Sbjct:   136 AVALQQGHDQVVSLLLE-----NDTKGKVRLPALHIAARKDDTKAAALLLQNDHN-ADVE 189

Query:   185 TKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLV 244
             +K G T  HIAA  G++ V   L+    +   +ARN +T   PL +A++ G+AN+V++L+
Sbjct:   190 SKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDIT---PLHVASKRGNANMVKLLL 246

Query:   245 KAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQA 303
               GA    + + G T +H  A++GH QV+E M   +   + SK K G++ LH+A      
Sbjct:   247 DRGAKIDAKTRDGLTPLHCGARSGHEQVVE-MLLDRGAPILSKTKNGLSPLHMATQGDHL 305

Query:   304 DTVRELLSH-VP-GTVKSDPPTGASFLGELG------------------SESGMTPLHLA 343
             + V+ L+ H VP   V +D  T        G                  + +G TPLH+A
Sbjct:   306 NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGFTPLHIA 365

Query:   344 AYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADK 403
                    V+ LLL   G  + A T E+G  P+H+A F GHV +V  L+   A    + + 
Sbjct:   366 CKKNRIKVMELLLKH-GASIQAVT-ESGLTPIHVAAFMGHVNIVSQLMHHGASP-NTTNV 422

Query:   404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
              G+T LH+AA  G  ++V  L+  GA++ A  K     +H +AR G   I+  LLQ+G  
Sbjct:   423 RGETALHMAARAGQTEVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGAS 482

Query:   464 VDVTTNN------LAC--GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEV 515
              +  T +      L+   GH  V  +LL   A L     K G T LH+AA +G +++  +
Sbjct:   483 PNAATTSGYTPLHLSAREGHEDVASVLLEHGASLA-IITKKGFTPLHVAAKYGKIEVANL 541

Query:   516 LLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVID 575
             LL + A  +A+ K                  G T LH+AA      +   L+ D  A   
Sbjct:   542 LLQKNASPDASGKS-----------------GLTPLHVAAHYDNQKVALLLL-DQGASPH 583

Query:   576 ILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
                    TPLH+AA+  Q+ +   LL+ GA  +A   QG  P+H+A+Q+   ++  + L
Sbjct:   584 ASAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVSLLL 642

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NNX8 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 654 (235.3 bits), Expect = 9.6e-61, P = 9.6e-61
 Identities = 200/659 (30%), Positives = 328/659 (49%)

Query:     6 SGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHG 65
             SG +I+  ++ Q   G   L +A   GH+E+V+ ++   A VD   ++G +ALH+A+  G
Sbjct:    21 SGVDIN--ISNQN--GLNALHLASKEGHVEVVSELIQRGASVDAATKKGNTALHIASLAG 76

Query:    66 YLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 125
               +V   L+T++A +N++S+ G T L++AA   + ++ +FL+ D+ A   + T    TPL
Sbjct:    77 QAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEVVKFLL-DNGASQSLATEDGFTPL 135

Query:   126 HLAAEAGQLQVCKLLLDLGASIDATDDQGQKP-IHVAAQNNFPEVAQIFLRAHPSLVTAT 184
              +A + G  QV  LLL+     + T  + + P +H+AA+ +  + A + L+   +     
Sbjct:   136 AVALQQGHDQVVSLLLE-----NDTKGKVRLPALHIAARKDDTKAAALLLQNDHN-ADVE 189

Query:   185 TKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLV 244
             +K G T  HIAA  G++ V   L+    +   +ARN +T   PL +A++ G+AN+V++L+
Sbjct:   190 SKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDIT---PLHVASKRGNANMVKLLL 246

Query:   245 KAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQA 303
               GA    + + G T +H  A++GH QV+E M   +   + SK K G++ LH+A      
Sbjct:   247 DRGAKIDAKTRDGLTPLHCGARSGHEQVVE-MLLDRGAPILSKTKNGLSPLHMATQGDHL 305

Query:   304 DTVRELLSH-VP-GTVKSDPPTGASFLGELG------------------SESGMTPLHLA 343
             + V+ L+ H VP   V +D  T        G                  + +G TPLH+A
Sbjct:   306 NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGFTPLHIA 365

Query:   344 AYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADK 403
                    V+ LLL   G  + A T E+G  P+H+A F GHV +V  L+   A    + + 
Sbjct:   366 CKKNRIKVMELLLKH-GASIQAVT-ESGLTPIHVAAFMGHVNIVSQLMHHGASP-NTTNV 422

Query:   404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
              G+T LH+AA  G  ++V  L+  GA++ A  K     +H +AR G   I+  LLQ+G  
Sbjct:   423 RGETALHMAARAGQTEVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGAS 482

Query:   464 VDVTTNN------LAC--GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEV 515
              +  T +      L+   GH  V  +LL   A L     K G T LH+AA +G +++  +
Sbjct:   483 PNAATTSGYTPLHLSAREGHEDVASVLLEHGASLA-IITKKGFTPLHVAAKYGKIEVANL 541

Query:   516 LLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVID 575
             LL + A  +A+ K                  G T LH+AA      +   L+ D  A   
Sbjct:   542 LLQKNASPDASGKS-----------------GLTPLHVAAHYDNQKVALLLL-DQGASPH 583

Query:   576 ILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
                    TPLH+AA+  Q+ +   LL+ GA  +A   QG  P+H+A+Q+   ++  + L
Sbjct:   584 ASAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVSLLL 642

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NNX6 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 654 (235.3 bits), Expect = 1.1e-60, P = 1.1e-60
 Identities = 200/659 (30%), Positives = 328/659 (49%)

Query:     6 SGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHG 65
             SG +I+  ++ Q   G   L +A   GH+E+V+ ++   A VD   ++G +ALH+A+  G
Sbjct:    21 SGVDIN--ISNQN--GLNALHLASKEGHVEVVSELIQRGASVDAATKKGNTALHIASLAG 76

Query:    66 YLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 125
               +V   L+T++A +N++S+ G T L++AA   + ++ +FL+ D+ A   + T    TPL
Sbjct:    77 QAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEVVKFLL-DNGASQSLATEDGFTPL 135

Query:   126 HLAAEAGQLQVCKLLLDLGASIDATDDQGQKP-IHVAAQNNFPEVAQIFLRAHPSLVTAT 184
              +A + G  QV  LLL+     + T  + + P +H+AA+ +  + A + L+   +     
Sbjct:   136 AVALQQGHDQVVSLLLE-----NDTKGKVRLPALHIAARKDDTKAAALLLQNDHN-ADVE 189

Query:   185 TKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLV 244
             +K G T  HIAA  G++ V   L+    +   +ARN +T   PL +A++ G+AN+V++L+
Sbjct:   190 SKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDIT---PLHVASKRGNANMVKLLL 246

Query:   245 KAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQA 303
               GA    + + G T +H  A++GH QV+E M   +   + SK K G++ LH+A      
Sbjct:   247 DRGAKIDAKTRDGLTPLHCGARSGHEQVVE-MLLDRGAPILSKTKNGLSPLHMATQGDHL 305

Query:   304 DTVRELLSH-VP-GTVKSDPPTGASFLGELG------------------SESGMTPLHLA 343
             + V+ L+ H VP   V +D  T        G                  + +G TPLH+A
Sbjct:   306 NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGFTPLHIA 365

Query:   344 AYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADK 403
                    V+ LLL   G  + A T E+G  P+H+A F GHV +V  L+   A    + + 
Sbjct:   366 CKKNRIKVMELLLKH-GASIQAVT-ESGLTPIHVAAFMGHVNIVSQLMHHGASP-NTTNV 422

Query:   404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
              G+T LH+AA  G  ++V  L+  GA++ A  K     +H +AR G   I+  LLQ+G  
Sbjct:   423 RGETALHMAARAGQTEVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGAS 482

Query:   464 VDVTTNN------LAC--GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEV 515
              +  T +      L+   GH  V  +LL   A L     K G T LH+AA +G +++  +
Sbjct:   483 PNAATTSGYTPLHLSAREGHEDVASVLLEHGASLA-IITKKGFTPLHVAAKYGKIEVANL 541

Query:   516 LLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVID 575
             LL + A  +A+ K                  G T LH+AA      +   L+ D  A   
Sbjct:   542 LLQKNASPDASGKS-----------------GLTPLHVAAHYDNQKVALLLL-DQGASPH 583

Query:   576 ILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
                    TPLH+AA+  Q+ +   LL+ GA  +A   QG  P+H+A+Q+   ++  + L
Sbjct:   584 ASAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVSLLL 642

GO:0007165 "signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	1015
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-33
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-33
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-32
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-29
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-28
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-28
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-26
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-24
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-23
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	7e-22
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	3e-21
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	5e-21
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-20
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-20
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-20
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	7e-19
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-18
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	5e-18
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	6e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-17
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	9e-17
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	2e-16
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	3e-15
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	4e-15
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-14
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	3e-14
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-13
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-13
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-13
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	4e-13
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	6e-13
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	7e-13
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	6e-12
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	7e-12
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-11
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	4e-11
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	4e-11
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	5e-11
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	6e-11
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-10
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	1e-10
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-10
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	1e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-10
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-10
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-10
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	3e-10
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	3e-10
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	4e-10
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	6e-10
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-09
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-09
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-09
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	2e-09
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	2e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-09
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	7e-09
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	7e-09
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	1e-08
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	1e-08
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	1e-08
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	3e-08
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	4e-08
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	4e-08
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	7e-08
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	9e-08
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	1e-07
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-07
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	1e-07
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-07
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-07
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-07
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-07
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	5e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	6e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	6e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	7e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	7e-07
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	1e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-06
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-06
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-06
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	6e-06
PHA02736	154	PHA02736, PHA02736, Viral ankyrin protein; Provisi	1e-05
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	2e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-05
PHA02743	166	PHA02743, PHA02743, Viral ankyrin protein; Provisi	2e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-05
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	4e-05
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	5e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	6e-05
PHA02736	154	PHA02736, PHA02736, Viral ankyrin protein; Provisi	6e-05
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	8e-05
smart00248	30	smart00248, ANK, ankyrin repeats	8e-05
smart00248	30	smart00248, ANK, ankyrin repeats	8e-05
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-04
PHA02743	166	PHA02743, PHA02743, Viral ankyrin protein; Provisi	2e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	5e-04
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	7e-04
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	8e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	8e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	8e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	9e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.001
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	0.002
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	0.002
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.002
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.002
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.002
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.002
smart00248	30	smart00248, ANK, ankyrin repeats	0.002
smart00248	30	smart00248, ANK, ankyrin repeats	0.002
smart00248	30	smart00248, ANK, ankyrin repeats	0.002
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	0.003
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.003
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.003
PHA02791	284	PHA02791, PHA02791, ankyrin-like protein; Provisio	0.003
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	0.004

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  124 bits (314), Expect = 2e-33
 Identities = 55/127 (43%), Positives = 81/127 (63%), Gaps = 1/127 (0%)

Query: 48  DVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 107
           +  D++GR+ LHLAA +G+L+V   LL + A +N+K   GRT LHLAA NG+ ++ + L+
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 108 HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFP 167
            +  A ++       TPLHLAA  G L V KLLL  GA ++A D  G+ P+H+AA+N   
Sbjct: 61  -EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHL 119

Query: 168 EVAQIFL 174
           EV ++ L
Sbjct: 120 EVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  123 bits (311), Expect = 4e-33
 Identities = 55/127 (43%), Positives = 81/127 (63%), Gaps = 1/127 (0%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N +   G TPL +A + GH+E+V  +L N A V+  D +GR+ LHLAA++G+L++   LL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
              A +N++ + G T LHLAA NG  D+ + L+  H A ++      +TPLHLAA+ G L
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLL-KHGADVNARDKDGRTPLHLAAKNGHL 119

Query: 135 QVCKLLL 141
           +V KLLL
Sbjct: 120 EVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  122 bits (308), Expect = 1e-32
 Identities = 57/141 (40%), Positives = 85/141 (60%), Gaps = 18/141 (12%)

Query: 494 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
           D++G+T LH+AA++GHL++V++LL  GA++NA D                   GRT LHL
Sbjct: 4   DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDND-----------------GRTPLHL 46

Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
           AA NG+ ++ + L+ +  A ++       TPLHLAA  G L V KLLL  GA ++A D  
Sbjct: 47  AAKNGHLEIVKLLL-EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKD 105

Query: 614 GQKPIHVAAQNNFPEVAQIFL 634
           G+ P+H+AA+N   EV ++ L
Sbjct: 106 GRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  113 bits (285), Expect = 2e-29
 Identities = 59/149 (39%), Positives = 88/149 (59%), Gaps = 27/149 (18%)

Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 428
           E+G  PLHLA   GH+ VV LLL   AD+    D +G+T LH+AA +GHL++V++LL +G
Sbjct: 5   EDGRTPLHLAASNGHLEVVKLLLENGADVNA-KDNDGRTPLHLAAKNGHLEIVKLLLEKG 63

Query: 429 AEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAAD 488
           A++NA DK G   +H AAR G++ ++  LL+ G  V+                       
Sbjct: 64  ADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNAR--------------------- 102

Query: 489 LLQSADKNGKTCLHIAATHGHLQMVEVLL 517
                DK+G+T LH+AA +GHL++V++LL
Sbjct: 103 -----DKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  110 bits (278), Expect = 2e-28
 Identities = 51/128 (39%), Positives = 82/128 (64%), Gaps = 2/128 (1%)

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           N++   GRT LHLAA NG+ ++ + L+ ++ A ++      +TPLHLAA+ G L++ KLL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLL-ENGADVNAKDNDGRTPLHLAAKNGHLEIVKLL 59

Query: 141 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGS 200
           L+ GA ++A D  G  P+H+AA+N   +V ++ L+ H + V A  KDG T  H+AA  G 
Sbjct: 60  LEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLK-HGADVNARDKDGRTPLHLAAKNGH 118

Query: 201 VGVIEELM 208
           + V++ L+
Sbjct: 119 LEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  110 bits (276), Expect = 3e-28
 Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 43/166 (25%)

Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           D++G+T LH+AA++GHL++V++LL  GA++NA D  G   +H AA+ GH+ I+  LL+KG
Sbjct: 4   DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKG 63

Query: 462 EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
             V+                            DK+G T LH+AA +G+L +V++LL  GA
Sbjct: 64  ADVNAR--------------------------DKDGNTPLHLAARNGNLDVVKLLLKHGA 97

Query: 522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 567
           ++NA DK                  GRT LHLAA NG+ ++ + L+
Sbjct: 98  DVNARDK-----------------DGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  104 bits (260), Expect = 3e-26
 Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 44/170 (25%)

Query: 432 NATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQ 491
           NA D+ G   +H AA  GH+ ++  LL+ G  V+                          
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAK------------------------ 36

Query: 492 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTAL 551
             D +G+T LH+AA +GHL++V++LL +GA++NA DK                  G T L
Sbjct: 37  --DNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDK-----------------DGNTPL 77

Query: 552 HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 601
           HLAA NG  D+ + L+  H A ++      +TPLHLAA+ G L+V KLLL
Sbjct: 78  HLAARNGNLDVVKLLL-KHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 98.6 bits (246), Expect = 3e-24
 Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 13/131 (9%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
           TPL LAA  GH  VV++L++ GA    ++  G T +HLAA+NGH ++++ +    A    
Sbjct: 9   TPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA 68

Query: 286 SKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAY 345
             K G T LH+AA  G  D V+ LL H           GA        + G TPLHLAA 
Sbjct: 69  RDKDGNTPLHLAARNGNLDVVKLLLKH-----------GADV--NARDKDGRTPLHLAAK 115

Query: 346 SGNENVVRLLL 356
           +G+  VV+LLL
Sbjct: 116 NGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 96.3 bits (240), Expect = 2e-23
 Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 15/138 (10%)

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHV 313
           ++ G T +HLAA NGH +V++ +  + A        G T LH+AA  G  + V+ LL   
Sbjct: 4   DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKG 63

Query: 314 PGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYN 373
                 D             + G TPLHLAA +GN +VV+LLL   G  V+A+ + +G  
Sbjct: 64  ADVNARD-------------KDGNTPLHLAARNGNLDVVKLLLKH-GADVNARDK-DGRT 108

Query: 374 PLHLACFGGHVTVVGLLL 391
           PLHLA   GH+ VV LLL
Sbjct: 109 PLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 91.7 bits (228), Expect = 7e-22
 Identities = 38/97 (39%), Positives = 63/97 (64%), Gaps = 1/97 (1%)

Query: 541 NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 600
           N++   GRT LHLAA NG+ ++ + L+ ++ A ++      +TPLHLAA+ G L++ KLL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLL-ENGADVNAKDNDGRTPLHLAAKNGHLEIVKLL 59

Query: 601 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 637
           L+ GA ++A D  G  P+H+AA+N   +V ++ L+  
Sbjct: 60  LEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHG 96

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 97.8 bits (244), Expect = 3e-21
 Identities = 99/374 (26%), Positives = 152/374 (40%), Gaps = 79/374 (21%)

Query: 326 SFLGELGSESGMTPLHLAAYSGNEN---VVRLLLNSAGVQVDAQTQENGYNPLHL-ACFG 381
           +F GE G     TPLHL  +  +E    +VRLLL  AG  V+A  +  G+ PLHL     
Sbjct: 41  NFRGEYGK----TPLHLYLHYSSEKVKDIVRLLLE-AGADVNAPER-CGFTPLHLYLYNA 94

Query: 382 GHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT--HGHLQMVEVLLGQGAEINATDKGGA 439
             + V+ LL+   AD+  + DK G+T LH+  +  + + +++ +LL +GA++NA D  G 
Sbjct: 95  TTLDVIKLLIKAGADVN-AKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYG- 152

Query: 440 RSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKT 499
               T      V + +         +          V ++ LL+   AD+  + D   ++
Sbjct: 153 ---MTPL---AVLLKSR--------NAN--------VELLRLLIDAGADVY-AVDDRFRS 189

Query: 500 CLHIAATHGHLQ-------MVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALH 552
            LH      HLQ       +V  L+  G +  ATD                  +G T LH
Sbjct: 190 LLHH-----HLQSFKPRARIVRELIRAGCDPAATD-----------------MLGNTPLH 227

Query: 553 LAAMNGYADLCRFLVHD----HAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID 608
             A       C+  +          I+      QTPLH AA     + C+ L+ LGA I+
Sbjct: 228 SMATGSS---CKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADIN 284

Query: 609 ATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT--AT--TKEKERAKDLIAAGKHCEGM 664
           A    G  P+ +  +NN     +  L  +PS  T  AT  T           A + C  +
Sbjct: 285 AVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVAATLNTASVAGGDIPSDATRLC--V 342

Query: 665 ATELLALAAGADSA 678
           A  +L  A      
Sbjct: 343 AKVVLRGAFSLLPE 356

Length = 471

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 89.4 bits (222), Expect = 5e-21
 Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 148 DATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL 207
           +A D+ G+ P+H+AA N   EV ++ L      V A   DG T  H+AA  G + +++ L
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLL 59

Query: 208 MKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQN 267
           ++      ++AR++    TPL LAA  G+ +VV++L+K GA     +K G T +HLAA+N
Sbjct: 60  LEKGAD--VNARDK-DGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKN 116

Query: 268 GHNQVLE 274
           GH +V++
Sbjct: 117 GHLEVVK 123

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 87.1 bits (216), Expect = 3e-20
 Identities = 39/94 (41%), Positives = 60/94 (63%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N + + G TPL +A   GH+E+V  +L   A V+  D++G + LHLAA +G L V   L
Sbjct: 33  VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLL 92

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 107
           L H A +N++ + GRT LHLAA NG+ ++ + L+
Sbjct: 93  LKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 94.3 bits (235), Expect = 3e-20
 Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 20/235 (8%)

Query: 396 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV---- 451
           DL   + K     L++A    ++ +V++LL  GA+IN++ K  +  +H  +   +     
Sbjct: 26  DLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDV 85

Query: 452 -GIINTLLQKGEKVDVTTNN----LAC------GHVTVVGLLLSRAADLLQSADKNGKTC 500
             I+  LL+ G  V+   NN    L           ++V  LL   A++    + +G+  
Sbjct: 86  KEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANV-NIKNSDGENL 144

Query: 501 LHIAATHGH--LQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG 558
           LH+        L+++++L+ +G +INA ++V + LL++   IN K   G T LH A  N 
Sbjct: 145 LHLYLESNKIDLKILKLLIDKGVDINAKNRV-NYLLSYGVPINIKDVYGFTPLHYAVYNN 203

Query: 559 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
             +  ++L+ D  A  +++     TPLH+A      ++ KLLL+ G SI    + 
Sbjct: 204 NPEFVKYLL-DLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTIIET 257

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 85.4 bits (212), Expect = 5e-20
 Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 5/96 (5%)

Query: 340 LHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQ 399
           LHLAA +GN  +V+LLL   G  V+          LHLA   G++ +V LLL   AD+  
Sbjct: 1   LHLAAKNGNLELVKLLLE-KGADVNLGDT---DTALHLAARNGNLEIVKLLLEHGADV-N 55

Query: 400 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 435
           + DK+G T LH+AA +G+L++V++LL  GA+IN  D
Sbjct: 56  AKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 81.9 bits (203), Expect = 7e-19
 Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 28/119 (23%)

Query: 409 LHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTT 468
           LH+AA +G+L++V++LL +GA++N  D   A  +H AAR G++ I+  LL+ G  V+   
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTDTA--LHLAARNGNLEIVKLLLEHGADVN--- 55

Query: 469 NNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 527
                                  + DK+G T LH+AA +G+L++V++LL  GA+IN  D
Sbjct: 56  -----------------------AKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 91  LHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDAT 150
           LHLAA NG  +L + L+   A   D+      T LHLAA  G L++ KLLL+ GA ++A 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGA---DVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAK 57

Query: 151 DDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
           D  G   +H+AA+N   E+ ++ L     +
Sbjct: 58  DKDGNTALHLAARNGNLEIVKLLLEHGADI 87

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 551 LHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDAT 610
           LHLAA NG  +L + L+   A   D+      T LHLAA  G L++ KLLL+ GA ++A 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGA---DVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAK 57

Query: 611 DDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 640
           D  G   +H+AA+N   E+ ++ L     +
Sbjct: 58  DKDGNTALHLAARNGNLEIVKLLLEHGADI 87

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 80.0 bits (198), Expect = 4e-18
 Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 20/111 (18%)

Query: 501 LHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA 560
           LH+AA +G+L++V++LL +GA++N  D                     TALHLAA NG  
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDT-------------------DTALHLAARNGNL 41

Query: 561 DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD 611
           ++ + L+ +H A ++       T LHLAA  G L++ KLLL+ GA I+  D
Sbjct: 42  EIVKLLL-EHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 80.0 bits (198), Expect = 4e-18
 Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 58  LHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 117
           LHLAA++G L++   LL   A +N       TALHLAA NG  ++ + L+ +H A ++  
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDT--DTALHLAARNGNLEIVKLLL-EHGADVNAK 57

Query: 118 TLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD 151
                T LHLAA  G L++ KLLL+ GA I+  D
Sbjct: 58  DKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 87.4 bits (217), Expect = 5e-18
 Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 22/169 (13%)

Query: 15  NKQTSIGWTPLLIACNR--GHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGY--LKVC 70
           N   + G TPLL A ++      +V  +L+N A V++ + +G + LHL  E     LK+ 
Sbjct: 100 NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKIL 159

Query: 71  DALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE 130
             L+     IN+K+RV                   L   +   I+I  +   TPLH A  
Sbjct: 160 KLLIDKGVDINAKNRVNY----------------LL--SYGVPINIKDVYGFTPLHYAVY 201

Query: 131 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179
               +  K LLDLGA+ +  +  G  P+H+A  NN  E+ ++ L   PS
Sbjct: 202 NNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPS 250

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 87.4 bits (217), Expect = 6e-18
 Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 28/220 (12%)

Query: 337 MTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHV-----TVVGLLL 391
           + PL+LA  + N +VV++LL++ G  ++  + +N   PLH      +       +V LLL
Sbjct: 36  VLPLYLAKEARNIDVVKILLDN-GADIN-SSTKNNSTPLHYLSNIKYNLTDVKEIVKLLL 93

Query: 392 SRAADLLQSADKNGKTCLHIAATH--GHLQMVEVLLGQGAEINATDKGGARSIHTAARYG 449
              A+ + + D NG T L  A +       +VE LL  GA +N  +  G   +H      
Sbjct: 94  EYGAN-VNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESN 152

Query: 450 HV--GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH 507
            +   I+  L+ KG  ++             V  LLS    +    D  G T LH A  +
Sbjct: 153 KIDLKILKLLIDKGVDINAKNR---------VNYLLSYGVPIN-IKDVYGFTPLHYAVYN 202

Query: 508 GHLQMVEVLLGQGAEINATDKVCDALLT------HKAFIN 541
            + + V+ LL  GA  N  +K  D  L       +K    
Sbjct: 203 NNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFK 242

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 78.5 bits (194), Expect = 1e-17
 Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 3/92 (3%)

Query: 25  LLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS 84
           L +A   G++ELV  +L   A V++ D +  +ALHLAA +G L++   LL H A +N+K 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 85  RVGRTALHLAAMNGYADLCRFLVHDHAAVIDI 116
           + G TALHLAA NG  ++ + L+ +H A I++
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLL-EHGADINL 89

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 82.9 bits (204), Expect = 1e-17
 Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 9/155 (5%)

Query: 325 ASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHV 384
                      G  PLH AA  G++ +V+LLL ++G  V+A+   +G  PLHLA   G+ 
Sbjct: 62  VDRHLAARDLDGRLPLHSAASKGDDKIVKLLL-ASGADVNAKDA-DGDTPLHLAALNGNP 119

Query: 385 T-----VVGLLLSRAA--DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
                 V  LLL   A  D+    D++G T LH AA +G   +VE+LL  GA+ N+ +  
Sbjct: 120 PEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSY 179

Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLA 472
           G  ++  AA+ G + ++  LL KG  + +   NL 
Sbjct: 180 GVTALDPAAKNGRIELVKLLLDKGLHLSLLKFNLE 214

Length = 235

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 76.1 bits (188), Expect = 9e-17
 Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 3/93 (3%)

Query: 375 LHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT 434
           LHLA   G++ +V LLL + AD+      +  T LH+AA +G+L++V++LL  GA++NA 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNL---GDTDTALHLAARNGNLEIVKLLLEHGADVNAK 57

Query: 435 DKGGARSIHTAARYGHVGIINTLLQKGEKVDVT 467
           DK G  ++H AAR G++ I+  LL+ G  +++ 
Sbjct: 58  DKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 83.0 bits (205), Expect = 2e-16
 Identities = 67/276 (24%), Positives = 111/276 (40%), Gaps = 36/276 (13%)

Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
           PLH A    ++ VV  LL+R  ++ Q  D    T LHI     +   ++ ++     IN 
Sbjct: 40  PLHQAVEARNLDVVKSLLTRGHNVNQP-DHRDLTPLHIICKEPNKLGMKEMI---RSINK 95

Query: 434 TDKGGA-RSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVT--------VVGLLLS 484
                   +I  A    +V I   +L    K   T + +     +        +  LLLS
Sbjct: 96  CSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLS 155

Query: 485 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK---------------- 528
             AD+       G T LH A  +   ++ E+LL  GA +N  DK                
Sbjct: 156 YGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKP 215

Query: 529 VCDALLTHKAFINSKSRVGRTALHLAAMNGYA---DLCRFLVHDHAAVIDILTLRKQTPL 585
           +   LL + A  +++ + G T LH++   GY    D+ + L+     V     +   T L
Sbjct: 216 IVHILLENGASTDARDKCGNTPLHISV--GYCKDYDILKLLLEHGVDVNAKSYILGLTAL 273

Query: 586 HLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 621
           H + ++   +  KLLL+ GA I++ +     P+  A
Sbjct: 274 HSSIKSE--RKLKLLLEYGADINSLNSYKLTPLSSA 307

Length = 477

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 78.9 bits (194), Expect = 3e-15
 Identities = 70/271 (25%), Positives = 102/271 (37%), Gaps = 52/271 (19%)

Query: 331 LGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLL 390
           +  +   TPL  A  SG+  +V L +   G  ++        +PL  A   G   ++ LL
Sbjct: 30  ISVDETTTPLIDAIRSGDAKIVELFIKH-GADIN-HINTKIPHPLLTAIKIGAHDIIKLL 87

Query: 391 LSRAAD----------------LLQSA------DKNGKTCLHIAATHGHLQMVEVLLGQG 428
           +    D                +L         D   KT LH A   G L+ +++L   G
Sbjct: 88  IDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYG 147

Query: 429 AEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLAC--------GHVTVVG 480
           A++N  D  G   IH A ++    II  LL+KG   +V  NN           G    + 
Sbjct: 148 ADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIK 207

Query: 481 LLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD------------- 527
           LL+     ++    KNG T LH A  H     +E+L+   A IN  D             
Sbjct: 208 LLIDHGNHIMNKC-KNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINP 264

Query: 528 ----KVCDALLTHKAFINSKSRVGRTALHLA 554
                + D LL HKA I+ K   G   +  A
Sbjct: 265 PCDIDIIDILLYHKADISIKDNKGENPIDTA 295

Length = 434

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 75.6 bits (185), Expect = 4e-15
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 29/223 (13%)

Query: 430 EINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADL 489
            +   +K     +  A        ++    K   + +    L     ++  LLL    D 
Sbjct: 7   ALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLP--AASLSELLLKLIVDR 64

Query: 490 LQ-SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGR 548
              + D +G+  LH AA+ G  ++V++LL  GA++NA D                   G 
Sbjct: 65  HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDAD-----------------GD 107

Query: 549 TALHLAAMNG-----YADLCRFLVHDHAAVIDILTLRK---QTPLHLAAEAGQLQVCKLL 600
           T LHLAA+NG       ++ + L+ +  A +D+  LR     TPLH AA  G   + +LL
Sbjct: 108 TPLHLAALNGNPPEGNIEVAKLLL-EAGADLDVNNLRDEDGNTPLHWAALNGDADIVELL 166

Query: 601 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTA 643
           L+ GA  ++ +  G   +  AA+N   E+ ++ L     L   
Sbjct: 167 LEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLL 209

Length = 235

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 73.7 bits (180), Expect = 2e-14
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 9/141 (6%)

Query: 51  DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNG-----YADLCRF 105
           D +GR  LH AA  G  K+   LL   A +N+K   G T LHLAA+NG       ++ + 
Sbjct: 70  DLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKL 129

Query: 106 LVHDHAAVIDILTLRK---QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAA 162
           L+ +  A +D+  LR     TPLH AA  G   + +LLL+ GA  ++ +  G   +  AA
Sbjct: 130 LL-EAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAA 188

Query: 163 QNNFPEVAQIFLRAHPSLVTA 183
           +N   E+ ++ L     L   
Sbjct: 189 KNGRIELVKLLLDKGLHLSLL 209

Length = 235

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 75.4 bits (185), Expect = 3e-14
 Identities = 83/296 (28%), Positives = 120/296 (40%), Gaps = 40/296 (13%)

Query: 412 AATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNL 471
           A   G L +   LL  G   N     G   I  A ++     I  L++ G   DV   ++
Sbjct: 9   AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDI 68

Query: 472 AC--------GHVTVVGLLLSRAADLLQSAD----KNGKTCLHIAATHGHLQMVEVLLGQ 519
                     G V  V  LL    DL + AD    K+G T LH+A     L ++++L+ +
Sbjct: 69  ESELHDAVEEGDVKAVEELL----DLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIAR 124

Query: 520 GAE--INATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 577
           GA+  I  TDK                    + LHLA M G       L+ DH A +DI 
Sbjct: 125 GADPDIPNTDKF-------------------SPLHLAVMMGDIKGIELLI-DHKACLDIE 164

Query: 578 TLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQ-KPIHVAAQNNFPEVAQIFLRA 636
                TPL +A   G + +CK+LLD GA+ID     G    +  A +NN  ++ ++F++ 
Sbjct: 165 DCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKR 224

Query: 637 HPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEF 692
                     E E    L      C  + +E +     AD A RI   T RR+  F
Sbjct: 225 GADCNIMFMIEGEECTILDMICNMCTNLESEAIDALI-ADIAIRIHKKTIRRDEGF 279

Length = 413

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 66.9 bits (164), Expect = 1e-13
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 46/135 (34%)

Query: 442 IHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCL 501
           +H AA+ G++ ++  LL+KG  V++   + A                            L
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTDTA----------------------------L 32

Query: 502 HIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD 561
           H+AA +G+L++V++LL  GA++NA DK                  G TALHLAA NG  +
Sbjct: 33  HLAARNGNLEIVKLLLEHGADVNAKDKD-----------------GNTALHLAARNGNLE 75

Query: 562 LCRFLVHDHAAVIDI 576
           + + L+ +H A I++
Sbjct: 76  IVKLLL-EHGADINL 89

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 71.0 bits (173), Expect = 2e-13
 Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 9/139 (6%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLK----- 68
           L  +   G  PL  A ++G  ++V  +L + A V+  D +G + LHLAA +G        
Sbjct: 66  LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIE 125

Query: 69  VCDALLTHKA---FINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 125
           V   LL   A     N +   G T LH AA+NG AD+   L+ +  A  +       T L
Sbjct: 126 VAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLL-EAGADPNSRNSYGVTAL 184

Query: 126 HLAAEAGQLQVCKLLLDLG 144
             AA+ G++++ KLLLD G
Sbjct: 185 DPAAKNGRIELVKLLLDKG 203

Length = 235

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 74.3 bits (182), Expect = 2e-13
 Identities = 96/393 (24%), Positives = 170/393 (43%), Gaps = 79/393 (20%)

Query: 239 VVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA-LNVYSKKLGVTALHVA 297
           +  +L++ GA    ++    T +H AA+ G+ +++  + S  A +N+ +    ++ L  A
Sbjct: 160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALD-DLSVLECA 218

Query: 298 AYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENV-VRLLL 356
                 DT++ ++ +     K+D                   L L     NE++   LLL
Sbjct: 219 VDSKNIDTIKAIIDNRSNINKND-------------------LSLLKAIRNEDLETSLLL 259

Query: 357 NSAGVQVDAQTQENGYNPLHLACFGGHVT-VVGLLLSRAADLLQSADKNGKTCLHIAATH 415
             AG  V++   +    PLH A     ++ +V  LL R AD+  + +  G+T L++ A +
Sbjct: 260 YDAGFSVNS-IDDCKNTPLHHASQAPSLSRLVPKLLERGADV-NAKNIKGETPLYLMAKN 317

Query: 416 GH-LQMVEVLLGQGAEINATDKGGARSIHTAA---RYGHVGIINTLLQKGEKVDVTTNNL 471
           G+  + +  L+  GA++NA D+     +H A+   R   + I  TLL+ G  V+      
Sbjct: 318 GYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVI--TLLELGANVN------ 369

Query: 472 ACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCD 531
                               + D   KT +H AA   ++ ++  LL  GA+I A  +   
Sbjct: 370 --------------------ARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQ--- 406

Query: 532 ALLTHKAFINSKSRVGRTALHLA--AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA 589
                        ++G TALH A    N Y  +   +  D  A ++       TPLH A 
Sbjct: 407 -------------KIG-TALHFALCGTNPYMSVKTLI--DRGANVNSKNKDLSTPLHYAC 450

Query: 590 EAG-QLQVCKLLLDLGASIDATDDQGQKPIHVA 621
           +   +L V ++LLD GA ++A + Q Q P+ +A
Sbjct: 451 KKNCKLDVIEMLLDNGADVNAINIQNQYPLLIA 483

Length = 682

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 72.4 bits (178), Expect = 4e-13
 Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 26  LIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL---AAEHGYLKVCDALLTHKAFINS 82
           L+  +   +E V  +L   A V+   + G++ LHL    +      +   LL   A +N+
Sbjct: 19  LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNA 78

Query: 83  KSRVGRTALHLAAMNGY-ADLCRFLVHDHAAVIDILTLRKQTPLH--LAAEAGQLQVCKL 139
             R G T LHL   N    D+ + L+    A ++      +TPLH  L+      +V +L
Sbjct: 79  PERCGFTPLHLYLYNATTLDVIKLLI-KAGADVNAKDKVGRTPLHVYLSGFNINPKVIRL 137

Query: 140 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI-FLRAHPSLVTATTKDGNTCAHIAA-- 196
           LL  GA ++A D  G  P+ V  ++    V  +  L    + V A      +  H     
Sbjct: 138 LLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQS 197

Query: 197 MQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGG--HANVVRVLVKAGASCTDEN 254
            +    ++ EL+   R+G   A   +   TPL   A G     ++V  L+ AG S    N
Sbjct: 198 FKPRARIVRELI---RAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARN 254

Query: 255 KTGFTAVHLAA 265
           + G T +H AA
Sbjct: 255 RYGQTPLHYAA 265

Length = 471

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 71.5 bits (175), Expect = 6e-13
 Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 32/245 (13%)

Query: 392 SRAADLLQSADKNGKTCLHI-----------AATHGHLQMVEVLLGQGAEINATDKGGAR 440
           S   + ++   KN   C++I           A   G  ++VE+ +  GA+IN  +     
Sbjct: 11  SGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPH 70

Query: 441 SIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTC 500
            + TA + G   II  L+  G  VD +   + C    ++  +L    D+    D   KT 
Sbjct: 71  PLLTAIKIGAHDIIKLLIDNG--VDTSILPIPCIEKDMIKTILDCGIDV-NIKDAELKTF 127

Query: 501 LHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA 560
           LH A   G L+ +++L   GA++N  D             N     G   +H+A  + + 
Sbjct: 128 LHYAIKKGDLESIKMLFEYGADVNIED------------DN-----GCYPIHIAIKHNFF 170

Query: 561 DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHV 620
           D+ + L+ +  A  ++     ++PLH AAE G     KLL+D G  I      G  P+H 
Sbjct: 171 DIIKLLL-EKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHN 229

Query: 621 AAQNN 625
           A  +N
Sbjct: 230 AIIHN 234

Length = 434

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 65.0 bits (159), Expect = 7e-13
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 228 LQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK 287
           L LAA+ G+  +V++L++ GA     +    TA+HLAA+NG+ ++++ +    A      
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 288 KLGVTALHVAAYFGQADTVRELLSH 312
           K G TALH+AA  G  + V+ LL H
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEH 83

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 66.4 bits (161), Expect = 6e-12
 Identities = 55/211 (26%), Positives = 76/211 (36%), Gaps = 39/211 (18%)

Query: 64  HGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY-----ADLCRFLVHDHAAVIDILT 118
              L V   LL      N   +     L LA +                H  A  +D   
Sbjct: 16  LDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDGRL 75

Query: 119 LRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHP 178
                PLH AA  G  ++ KLLL  GA ++A D  G  P+H+AA N  P    I      
Sbjct: 76  -----PLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIE----- 125

Query: 179 SLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHAN 238
                                   V + L++      ++        TPL  AA  G A+
Sbjct: 126 ------------------------VAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDAD 161

Query: 239 VVRVLVKAGASCTDENKTGFTAVHLAAQNGH 269
           +V +L++AGA     N  G TA+  AA+NG 
Sbjct: 162 IVELLLEAGADPNSRNSYGVTALDPAAKNGR 192

Length = 235

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 62.3 bits (152), Expect = 7e-12
 Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 5/89 (5%)

Query: 193 HIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD 252
           H+AA  G++ +++ L++          N     T L LAA  G+  +V++L++ GA    
Sbjct: 2   HLAAKNGNLELVKLLLEKGAD-----VNLGDTDTALHLAARNGNLEIVKLLLEHGADVNA 56

Query: 253 ENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281
           ++K G TA+HLAA+NG+ ++++ +    A
Sbjct: 57  KDKDGNTALHLAARNGNLEIVKLLLEHGA 85

Length = 91

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 68.6 bits (167), Expect = 1e-11
 Identities = 93/382 (24%), Positives = 164/382 (42%), Gaps = 62/382 (16%)

Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINS 82
           TP+  A  RG+ ++VN +L+  A V++   +  S L  A +   +       T KA I++
Sbjct: 180 TPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNID------TIKAIIDN 233

Query: 83  KSRVGRTALHLAAMNGYADL-CRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL-QVCKLL 140
           +S + +  L L       DL    L++D    ++ +   K TPLH A++A  L ++   L
Sbjct: 234 RSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKL 293

Query: 141 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGS 200
           L+ GA ++A + +G+ P+++ A+N +       L    + V A  +   T  H A+    
Sbjct: 294 LERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQAST--- 350

Query: 201 VGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTA 260
                     DR                       + ++V  L++ GA+    +    T 
Sbjct: 351 ---------LDR-----------------------NKDIVITLLELGANVNARDYCDKTP 378

Query: 261 VHLAAQNGHNQVLEEMRSSKA-LNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKS 319
           +H AA   +  ++  +    A +   S+K+G TALH A                  +VK+
Sbjct: 379 IHYAAVRNNVVIINTLLDYGADIEALSQKIG-TALHFALCGTNPYM----------SVKT 427

Query: 320 DPPTGASFLGELGSESGMTPLHLAAYSGNE-NVVRLLLNSAGVQVDAQTQENGYNPLHLA 378
               GA+   +    S  TPLH A     + +V+ +LL++ G  V+A   +N Y PL +A
Sbjct: 428 LIDRGANVNSKNKDLS--TPLHYACKKNCKLDVIEMLLDN-GADVNAINIQNQY-PLLIA 483

Query: 379 CFGGHVTVVGLLLSRAADLLQS 400
               +  +V +LL   A+L  S
Sbjct: 484 L--EYHGIVNILLHYGAELRDS 503

Length = 682

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 66.1 bits (161), Expect = 4e-11
 Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 4/161 (2%)

Query: 35  ELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLA 94
           +++ T+L+    V++ D E ++ LH A + G L+    L  + A +N +   G   +H+A
Sbjct: 105 DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIA 164

Query: 95  AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG 154
             + + D+ + L+ +  A  ++     ++PLH AAE G     KLL+D G  I      G
Sbjct: 165 IKHNFFDIIKLLL-EKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNG 223

Query: 155 QKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIA 195
             P+H A  +N    + I L  + + +     DG+T  H A
Sbjct: 224 FTPLHNAIIHN---RSAIELLINNASINDQDIDGSTPLHHA 261

Length = 434

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 66.6 bits (162), Expect = 4e-11
 Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 418 LQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNN----LAC 473
           L + E+LL  GA++NA D      IH AA  G+  ++N LL  G  V++   +    L C
Sbjct: 158 LLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLEC 217

Query: 474 G----HVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD-- 527
                ++  +  ++   +++    +KN  + L  A  +  L+   +L   G  +N+ D  
Sbjct: 218 AVDSKNIDTIKAIIDNRSNI----NKNDLSLLK-AIRNEDLETSLLLYDAGFSVNSIDDC 272

Query: 528 ---------------KVCDALLTHKAFINSKSRVGRTALHLAAMNGY-ADLCRFLVHDHA 571
                          ++   LL   A +N+K+  G T L+L A NGY  +  R L+   A
Sbjct: 273 KNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGA 332

Query: 572 AVIDILTLRKQTPLHLAAEAGQLQ-VCKLLLDLGASIDATDDQGQKPIHVAAQNN 625
            V     L   TPLH A+   + + +   LL+LGA+++A D   + PIH AA  N
Sbjct: 333 DVNAADRLY-ITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRN 386

Length = 682

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 65.8 bits (161), Expect = 5e-11
 Identities = 63/267 (23%), Positives = 108/267 (40%), Gaps = 57/267 (21%)

Query: 282 LNVYSKKLGVTALHVAAYFGQADTVRELLSH---VPGTVKSDPPTGASFLGELGSESGMT 338
           LN YS K  V  L++A      D V+ LL +   +  + K++                 T
Sbjct: 27  LNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNN----------------ST 70

Query: 339 PLHLAA---YSGNENV--VRLLLNSAGVQVDAQTQENGYNPLHLACFG--GHVTVVGLLL 391
           PLH  +   Y+  +    V+LLL   G  V+A    NG  PL  A        ++V  LL
Sbjct: 71  PLHYLSNIKYNLTDVKEIVKLLLEY-GANVNAPD-NNGITPLLYAISKKSNSYSIVEYLL 128

Query: 392 SRAADLLQSADKNGKTCLHIAATHGH--LQMVEVLLGQGAEINATDKGGARSIHTAARYG 449
              A++    + +G+  LH+        L+++++L+ +G +INA ++             
Sbjct: 129 DNGANV-NIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNR------------- 174

Query: 450 HVGIINTLLQKGEKVDVTTNN------LAC--GHVTVVGLLLSRAADLLQSADKNGKTCL 501
               +N LL  G  +++           A    +   V  LL   A+     +K G T L
Sbjct: 175 ----VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANP-NLVNKYGDTPL 229

Query: 502 HIAATHGHLQMVEVLLGQGAEINATDK 528
           HIA  + + ++ ++LL  G  I    +
Sbjct: 230 HIAILNNNKEIFKLLLNNGPSIKTIIE 256

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 65.5 bits (160), Expect = 6e-11
 Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 55/268 (20%)

Query: 108 HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNF- 166
                + D    +   PL+LA EA  + V K+LLD GA I+++      P+H  +   + 
Sbjct: 22  IMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYN 81

Query: 167 ----PEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQ--GSVGVIEELMKFDRSGVISARN 220
                E+ ++ L  + + V A   +G T    A  +   S  ++E L   D    ++ +N
Sbjct: 82  LTDVKEIVKLLL-EYGANVNAPDNNGITPLLYAISKKSNSYSIVEYL--LDNGANVNIKN 138

Query: 221 RVTEATPLQLAAEGGHA--NVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRS 278
              E   L L  E       ++++L+  G             V + A+N  N +L     
Sbjct: 139 SDGE-NLLHLYLESNKIDLKILKLLIDKG-------------VDINAKNRVNYLLSYGVP 184

Query: 279 SKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELG------ 332
               +VY    G T LH A Y    + V+ LL                   +LG      
Sbjct: 185 INIKDVY----GFTPLHYAVYNNNPEFVKYLL-------------------DLGANPNLV 221

Query: 333 SESGMTPLHLAAYSGNENVVRLLLNSAG 360
           ++ G TPLH+A  + N+ + +LLLN+  
Sbjct: 222 NKYGDTPLHIAILNNNKEIFKLLLNNGP 249

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 64.3 bits (157), Expect = 1e-10
 Identities = 61/257 (23%), Positives = 92/257 (35%), Gaps = 46/257 (17%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKAL--- 282
            PL LA E  + +VV++L+  GA      K   T +H  +   +N   +     K L   
Sbjct: 37  LPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNL-TDVKEIVKLLLEY 95

Query: 283 ----NVYSKKLGVTALHVAAY--FGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESG 336
               N      G+T L  A          V  LL +           GA+    + +  G
Sbjct: 96  GANVNAPDNN-GITPLLYAISKKSNSYSIVEYLLDN-----------GANV--NIKNSDG 141

Query: 337 MTPLHLAAYSGNE--NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRA 394
              LHL   S      +++LL++  GV ++A+                    V  LLS  
Sbjct: 142 ENLLHLYLESNKIDLKILKLLIDK-GVDINAKN------------------RVNYLLSYG 182

Query: 395 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGII 454
             +    D  G T LH A  + + + V+ LL  GA  N  +K G   +H A    +  I 
Sbjct: 183 VPIN-IKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIF 241

Query: 455 NTLLQKGEKVDVTTNNL 471
             LL  G  +      L
Sbjct: 242 KLLLNNGPSIKTIIETL 258

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 18/106 (16%)

Query: 262 HLAAQNGHNQVLEEMRSSKA-LNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSD 320
           HLAA+NG+ ++++ +    A +N+       TALH+AA  G  + V+ LL H        
Sbjct: 2   HLAAKNGNLELVKLLLEKGADVNLGDTD---TALHLAARNGNLEIVKLLLEH-------- 50

Query: 321 PPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQ 366
              GA        + G T LHLAA +GN  +V+LLL   G  ++ +
Sbjct: 51  ---GADV--NAKDKDGNTALHLAARNGNLEIVKLLL-EHGADINLK 90

Length = 91

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 64.6 bits (157), Expect = 1e-10
 Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 5/142 (3%)

Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINS 82
           T L  A  +G +E +  +    A V++ D  G   +H+A +H +  +   LL   A+ N 
Sbjct: 126 TFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV 185

Query: 83  KSRVGRTALHLAAMNG-YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 141
           K   G + LH AA  G YA  C  L+ DH   I        TPLH A    +    +LL+
Sbjct: 186 KDNNGESPLHNAAEYGDYA--CIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI 242

Query: 142 DLGASIDATDDQGQKPIHVAAQ 163
           +  ASI+  D  G  P+H A  
Sbjct: 243 N-NASINDQDIDGSTPLHHAIN 263

Length = 434

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 65.1 bits (158), Expect = 1e-10
 Identities = 106/440 (24%), Positives = 172/440 (39%), Gaps = 77/440 (17%)

Query: 3   EQMSGTEIS-KALNKQTSIGWTPLLIA-CNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
           E +SG +I    +N+  SI +  L+     +  + +   +L   A V+  D    + +H 
Sbjct: 127 EAISGNDIHYDKINE--SIEYMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHY 184

Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
           AAE G  K+ + LL++ A +N  +    + L  A  +   D  +       A+ID  +  
Sbjct: 185 AAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIK-------AIIDNRSNI 237

Query: 121 KQTPLHL--AAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHP 178
            +  L L  A     L+   LL D G S+++ DD    P+H A+Q              P
Sbjct: 238 NKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQA-------------P 284

Query: 179 SLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGH-A 237
           SL     K                        +R   ++A+N +   TPL L A+ G+  
Sbjct: 285 SLSRLVPK----------------------LLERGADVNAKN-IKGETPLYLMAKNGYDT 321

Query: 238 NVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQ-----VLEEMRSSKALNVYSKKLGVT 292
             +R L+  GA     ++   T +H A+    N+     +LE   +  A +   K    T
Sbjct: 322 ENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDK----T 377

Query: 293 ALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVV 352
            +H AA       +  LL +           GA    E  S+   T LH A    N  + 
Sbjct: 378 PIHYAAVRNNVVIINTLLDY-----------GADI--EALSQKIGTALHFALCGTNPYMS 424

Query: 353 RLLLNSAGVQVDAQTQENGYNPLHLACFGG-HVTVVGLLLSRAADLLQSADKNGKTCLHI 411
              L   G  V+++ ++    PLH AC     + V+ +LL   AD+     +N    L  
Sbjct: 425 VKTLIDRGANVNSKNKDLS-TPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIA 483

Query: 412 AATHGHLQMVEVLLGQGAEI 431
              HG   +V +LL  GAE+
Sbjct: 484 LEYHG---IVNILLHYGAEL 500

Length = 682

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 65.3 bits (159), Expect = 1e-10
 Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 13/168 (7%)

Query: 25  LLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS 84
           LL   + G+  L+  +L      D+ D +GR+ LH+AA  GY      LL H   ++ + 
Sbjct: 529 LLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRD 588

Query: 85  RVGRTALHLAAMNGYADLCRFLVH-----DHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
             G TAL  A    +  + R L H     D  A  D+L          AA+   L   K 
Sbjct: 589 ANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLC--------TAAKRNDLTAMKE 640

Query: 140 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKD 187
           LL  G ++D+ D QG   + VA   +  ++ ++ +     +  A T D
Sbjct: 641 LLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDD 688

Length = 823

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 26/61 (42%), Positives = 39/61 (63%)

Query: 23 TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINS 82
          T L +A   G++E+V  +L + A V+  D++G +ALHLAA +G L++   LL H A IN 
Sbjct: 30 TALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINL 89

Query: 83 K 83
          K
Sbjct: 90 K 90

Length = 91

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 63.9 bits (155), Expect = 2e-10
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 2/155 (1%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           G +P+ +A      E +  ++ + A  DV   +  S LH A E G +K  + LL    F 
Sbjct: 35  GISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFA 94

Query: 81  NSK-SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
           +    + G T LHLA +    D+ + L+    A  DI    K +PLHLA   G ++  +L
Sbjct: 95  DDVFYKDGMTPLHLATILKKLDIMKLLIA-RGADPDIPNTDKFSPLHLAVMMGDIKGIEL 153

Query: 140 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 174
           L+D  A +D  D  G  P+ +A       + ++ L
Sbjct: 154 LIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLL 188

Length = 413

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 63.9 bits (155), Expect = 2e-10
 Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 338 TPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADL 397
           + LH A   G+   V  LL+  G   D    ++G  PLHLA     + ++ LL++R AD 
Sbjct: 70  SELHDAVEEGDVKAVEELLDL-GKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADP 128

Query: 398 -LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINT 456
            + + DK   + LH+A   G ++ +E+L+   A ++  D  G   +  A   G + I   
Sbjct: 129 DIPNTDKF--SPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKM 186

Query: 457 LLQKGEKVDVTTNN----LACGHVT-----VVGLLLSRAAD 488
           LL  G  +D    N      C  +      +V L + R AD
Sbjct: 187 LLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGAD 227

Length = 413

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 63.4 bits (154), Expect = 3e-10
 Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 47/218 (21%)

Query: 386 VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTA 445
           +  LLLS  AD+       G T LH A  +   ++ E+LL  GA +N  DK     +H A
Sbjct: 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHA 208

Query: 446 ARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAA 505
            ++ +  I++ LL+ G   D                            DK G T LHI+ 
Sbjct: 209 VKHYNKPIVHILLENGASTDAR--------------------------DKCGNTPLHISV 242

Query: 506 THGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRV-GRTALHLAAMNGYADLCR 564
             G+ +  ++L                LL H   +N+KS + G TALH +  +      +
Sbjct: 243 --GYCKDYDIL--------------KLLLEHGVDVNAKSYILGLTALHSSIKS--ERKLK 284

Query: 565 FLVHDHAAVIDILTLRKQTPLHLAAEA-GQLQVCKLLL 601
            L+ ++ A I+ L   K TPL  A +    + + ++L+
Sbjct: 285 LLL-EYGADINSLNSYKLTPLSSAVKQYLCINIGRILI 321

Length = 477

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 64.1 bits (156), Expect = 3e-10
 Identities = 43/186 (23%), Positives = 64/186 (34%), Gaps = 45/186 (24%)

Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           D  G+T LHIAA+ G+   V VLL     ++  D  G  ++  A    H  I   L    
Sbjct: 555 DSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYH-- 612

Query: 462 EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
                                 +  +D   + D      L  AA    L  ++ LL QG 
Sbjct: 613 ---------------------FASISDPHAAGD-----LLCTAAKRNDLTAMKELLKQGL 646

Query: 522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK 581
                             ++S+   G TAL +A    + D+ R L+ + A V    T   
Sbjct: 647 N-----------------VDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDD 689

Query: 582 QTPLHL 587
            +P  L
Sbjct: 690 FSPTEL 695

Length = 823

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 62.7 bits (152), Expect = 4e-10
 Identities = 65/318 (20%), Positives = 131/318 (41%), Gaps = 38/318 (11%)

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT 182
           TPL  A  +G  ++ +L +  GA I+          H+  +   P +  I + AH  ++ 
Sbjct: 37  TPLIDAIRSGDAKIVELFIKHGADIN----------HINTKIPHPLLTAIKIGAH-DIIK 85

Query: 183 ATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVR 241
               +G   + +        +I+ ++     G+ ++ ++   + T L  A + G    ++
Sbjct: 86  LLIDNGVDTSILPIPCIEKDMIKTILD---CGIDVNIKDAELK-TFLHYAIKKGDLESIK 141

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA-LNVYSKKLGVTALHVAAYF 300
           +L + GA    E+  G   +H+A ++    +++ +    A  NV     G + LH AA +
Sbjct: 142 MLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV-KDNNGESPLHNAAEY 200

Query: 301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
           G    ++ L+ H    +                ++G TPLH A    N + + LL+N+A 
Sbjct: 201 GDYACIKLLIDHGNHIMNK-------------CKNGFTPLHNAIIH-NRSAIELLINNAS 246

Query: 361 VQVDAQTQENGYNPLHLAC-FGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH-GHL 418
           +        +G  PLH A      + ++ +LL   AD +   D  G+  +  A  +    
Sbjct: 247 IND---QDIDGSTPLHHAINPPCDIDIIDILLYHKAD-ISIKDNKGENPIDTAFKYINKD 302

Query: 419 QMVEVLLGQGAEINATDK 436
            +++ ++     I   DK
Sbjct: 303 PVIKDIIANAVLIKEADK 320

Length = 434

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 62.7 bits (153), Expect = 6e-10
 Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 11/170 (6%)

Query: 21  GWTPL--LIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAE--HGYLKVCDALLTH 76
           G TPL  L+     ++EL+  +++  A V   D   RS LH   +      ++   L+  
Sbjct: 152 GMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRA 211

Query: 77  KAFINSKSRVGRTALHLAAMNGYADLCRFLVHD----HAAVIDILTLRKQTPLHLAAEAG 132
                +   +G T LH  A       C+  +          I+      QTPLH AA   
Sbjct: 212 GCDPAATDMLGNTPLHSMATGSS---CKRSLVLPLLIAGISINARNRYGQTPLHYAAVFN 268

Query: 133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT 182
             + C+ L+ LGA I+A    G  P+ +  +NN     +  L  +PS  T
Sbjct: 269 NPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAET 318

Length = 471

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 56.5 bits (137), Expect = 6e-10
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 39/130 (30%)

Query: 125 LHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTAT 184
           LHLAA+ G L++ KLLL+ GA ++  D      +H+AA+N   E+ ++ L      V A 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTDT--ALHLAARNGNLEIVKLLLEHGAD-VNAK 57

Query: 185 TKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLV 244
            KDGNT                                     L LAA  G+  +V++L+
Sbjct: 58  DKDGNT------------------------------------ALHLAARNGNLEIVKLLL 81

Query: 245 KAGASCTDEN 254
           + GA    ++
Sbjct: 82  EHGADINLKD 91

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 59.1 bits (142), Expect = 2e-09
 Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 23/211 (10%)

Query: 156 KPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGV 215
             + +        +  + L     L   + K  N    +A +  +      L       +
Sbjct: 7   ALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHL 66

Query: 216 ISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGH------ 269
            +         PL  AA  G   +V++L+ +GA    ++  G T +HLAA NG+      
Sbjct: 67  AARDLDG--RLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNI 124

Query: 270 --NQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASF 327
              ++L E  +   +N    + G T LH AA  G AD V  LL        +DP +  S 
Sbjct: 125 EVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEA-----GADPNSRNS- 178

Query: 328 LGELGSESGMTPLHLAAYSGNENVVRLLLNS 358
                   G+T L  AA +G   +V+LLL+ 
Sbjct: 179 -------YGVTALDPAAKNGRIELVKLLLDK 202

Length = 235

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 60.4 bits (146), Expect = 2e-09
 Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 16/235 (6%)

Query: 235 GHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTAL 294
           G  ++ R L+  G +   E   G + + LA +   ++ ++ +    A+         + L
Sbjct: 13  GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESEL 72

Query: 295 HVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRL 354
           H A   G    V ELL                F  ++  + GMTPLHLA      ++++L
Sbjct: 73  HDAVEEGDVKAVEELLD------------LGKFADDVFYKDGMTPLHLATILKKLDIMKL 120

Query: 355 LLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT 414
           L+ + G   D    +  ++PLHLA   G +  + LL+   A  L   D  G T L IA  
Sbjct: 121 LI-ARGADPDIPNTDK-FSPLHLAVMMGDIKGIELLIDHKA-CLDIEDCCGCTPLIIAMA 177

Query: 415 HGHLQMVEVLLGQGAEINATDKGG-ARSIHTAARYGHVGIINTLLQKGEKVDVTT 468
            G + + ++LL  GA I+   K G   ++  A     + I+   +++G   ++  
Sbjct: 178 KGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMF 232

Length = 413

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 60.8 bits (147), Expect = 2e-09
 Identities = 78/313 (24%), Positives = 131/313 (41%), Gaps = 32/313 (10%)

Query: 389 LLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARY 448
           +LL   AD+  + D    T +H AA  G+ +MV +LL  GA++N         +  A   
Sbjct: 163 MLLEGGADV-NAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDS 221

Query: 449 GHVGIINTLLQKGEKV---DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAA 505
            ++  I  ++     +   D++             LLL  A   + S D    T LH A+
Sbjct: 222 KNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHAS 281

Query: 506 THGHL-QMVEVLLGQGAEINATD-----------------KVCDALLTHKAFINSKSRVG 547
               L ++V  LL +GA++NA +                 +    L+   A +N+  R+ 
Sbjct: 282 QAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLY 341

Query: 548 RTALHLAA-MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
            T LH A+ ++   D+   L+ +  A ++      +TP+H AA    + +   LLD GA 
Sbjct: 342 ITPLHQASTLDRNKDIVITLL-ELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGAD 400

Query: 607 IDATDDQGQKPIHVA--AQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL-IAAGKHCEG 663
           I+A   +    +H A    N +  V  +  R         +K K+ +  L  A  K+C+ 
Sbjct: 401 IEALSQKIGTALHFALCGTNPYMSVKTLIDRG----ANVNSKNKDLSTPLHYACKKNCKL 456

Query: 664 MATELLALAAGAD 676
              E+L L  GAD
Sbjct: 457 DVIEML-LDNGAD 468

Length = 682

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 61.4 bits (149), Expect = 2e-09
 Identities = 54/232 (23%), Positives = 83/232 (35%), Gaps = 57/232 (24%)

Query: 421 VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVG 480
           V  LLG     +  D   A ++ T A  G+  ++  LL+     D+              
Sbjct: 509 VGDLLGDNGGEH-DDPNMASNLLTVASTGNAALLEELLKAKLDPDIG------------- 554

Query: 481 LLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFI 540
                        D  G+T LHIAA+ G+   V VLL     ++  D             
Sbjct: 555 -------------DSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRD------------A 589

Query: 541 NSKSRVGRTALHLAAMNGYADLCRFLVH-----DHAAVIDILTLRKQTPLHLAAEAGQLQ 595
           N     G TAL  A    +  + R L H     D  A  D+L          AA+   L 
Sbjct: 590 N-----GNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLC--------TAAKRNDLT 636

Query: 596 VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKE 647
             K LL  G ++D+ D QG   + VA   +  ++ ++ +     +  A T +
Sbjct: 637 AMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDD 688

Length = 823

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 60.9 bits (148), Expect = 2e-09
 Identities = 57/219 (26%), Positives = 81/219 (36%), Gaps = 34/219 (15%)

Query: 9   EISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHA--RVDVFDQEGRSALHLAAEHGY 66
           +I  A     S      L A  RG +  V   L       ++  D+ GRSAL +AA    
Sbjct: 5   DIVPAEESPLSDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENE 64

Query: 67  LKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCR-FLVHDHAAVIDILTL------ 119
                 LL     ++ +  VG T LH A    Y D     L+H  AA      L      
Sbjct: 65  NLELTELLL---NLSCRGAVGDTLLH-AISLEYVDAVEAILLHLLAAFRKSGPLELANDQ 120

Query: 120 ------RKQTPLHLAAEAGQLQVCKLLLDLGASIDA---------TDDQ-----GQKPIH 159
                    T LHLAA     ++ KLLL+ GAS+ A         +        G+ P++
Sbjct: 121 YTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLN 180

Query: 160 VAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQ 198
            AA    P +  +     P+ +      GNT  H+  M+
Sbjct: 181 AAACLGSPSIVALLSE-DPADILTADSLGNTLLHLLVME 218

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 22/52 (42%), Positives = 34/52 (65%)

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 174
           T LH AA +G+L++ K LL+ G  I+ TD+ G   +H+AA+N   EV ++ L
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 22/52 (42%), Positives = 34/52 (65%)

Query: 583 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           T LH AA +G+L++ K LL+ G  I+ TD+ G   +H+AA+N   EV ++ L
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 53.0 bits (128), Expect = 4e-09
 Identities = 22/52 (42%), Positives = 34/52 (65%)

Query: 407 TCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLL 458
           T LH AA  G L++V+ LL +G +IN TD+ G  ++H AA  G++ ++  LL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 53.0 bits (128), Expect = 4e-09
 Identities = 23/54 (42%), Positives = 31/54 (57%)

Query: 54  GRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 107
           GR+ALH AA  G L++   LL     IN     G TALH+AA NG  ++ + L+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 58.9 bits (143), Expect = 7e-09
 Identities = 57/225 (25%), Positives = 85/225 (37%), Gaps = 52/225 (23%)

Query: 14  LNKQTSIGWTPL-LIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYL----- 67
           +N     G+TPL L   N   ++++  ++   A V+  D+ GR+ LH+     YL     
Sbjct: 76  VNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHV-----YLSGFNI 130

Query: 68  --KVCDALLTHKAFINSKSRVGRTALH--LAAMNGYADLCRFLV---------------- 107
             KV   LL   A +N+    G T L   L + N   +L R L+                
Sbjct: 131 NPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSL 190

Query: 108 -HDHA-------AVIDILTLR----------KQTPLHLAAEAGQLQVCKL--LLDLGASI 147
            H H         ++  L               TPLH  A     +   +  LL  G SI
Sbjct: 191 LHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISI 250

Query: 148 DATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCA 192
           +A +  GQ P+H AA  N P   +  +      + A + DGNT  
Sbjct: 251 NARNRYGQTPLHYAAVFNNPRACRRLIALGAD-INAVSSDGNTPL 294

Length = 471

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 59.1 bits (143), Expect = 7e-09
 Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 10/158 (6%)

Query: 7   GTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGY 66
           G +I+    K    G T L  A       L   +L+  A V++ D+   S LH A +H  
Sbjct: 157 GADINM---KDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYN 213

Query: 67  LKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA---DLCRFLVHDHAAVIDILTLRKQT 123
             +   LL + A  +++ + G T LH++   GY    D+ + L+     V     +   T
Sbjct: 214 KPIVHILLENGASTDARDKCGNTPLHISV--GYCKDYDILKLLLEHGVDVNAKSYILGLT 271

Query: 124 PLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 161
            LH + ++   +  KLLL+ GA I++ +     P+  A
Sbjct: 272 ALHSSIKSE--RKLKLLLEYGADINSLNSYKLTPLSSA 307

Length = 477

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 58.9 bits (143), Expect = 1e-08
 Identities = 91/461 (19%), Positives = 151/461 (32%), Gaps = 88/461 (19%)

Query: 511 QMVEVLLGQGAEIN-ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCR-FLVH 568
                 LG+ A    A +     L      ++ +  VG T LH A    Y D     L+H
Sbjct: 45  INCPDRLGRSALFVAAIENENLELTELLLNLSCRGAVGDTLLH-AISLEYVDAVEAILLH 103

Query: 569 DHAAVIDILTL------------RKQTPLHLAAEAGQLQVCKLLLDLGASIDA------- 609
             AA      L               T LHLAA     ++ KLLL+ GAS+ A       
Sbjct: 104 LLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFF 163

Query: 610 --TDDQ-----GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTK-----------EKERA 651
             +        G+ P++ AA    P +  +     P+ +                E E  
Sbjct: 164 VKSQGVDSFYHGESPLNAAACLGSPSIVALLSE-DPADILTADSLGNTLLHLLVMENEFK 222

Query: 652 KDLIAAGKHCEGMATELLALAAGADSAGRILT---------ATDRRNIEFLDVL--IENE 700
            +           A  LL     +     IL          A     I    +   I+ +
Sbjct: 223 AEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYK 282

Query: 701 QKEVIAHTVVQRYLQELWQGSL-----NWAAWKTMLLFLTFILCPPVWICFTLS----LG 751
           QK+ +A    Q+ L   W   L       +  + +++F+  +  P +   + ++    LG
Sbjct: 283 QKKFVAWPNGQQLLSLYWLEELDGWRRKQSVLELIVVFVIGLKFPELSDMYLIAPLSRLG 342

Query: 752 HKYNKVPIIKFMSYLTSHMYLMFLLMLVGITPIYPVV----RPNLVPYWYEWTLLVWLSG 807
            ++   P IKF+ +  S++Y ++L++   +    P         L     E  ++ W+ G
Sbjct: 343 -QFKWKPFIKFIFHSASYLYFLYLIIFTSVAYYRPTRTDLRVTGLQQTPLEMLIVTWVDG 401

Query: 808 LLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLL-EYTFILSEGKITTHLLPF----QF 862
           L L E                + L GIF     L     F ++   + T L         
Sbjct: 402 LRLGEE-------------KLIWLGGIFEYIHQLWNILDFGMNSFYLATFLDRPFAILFV 448

Query: 863 VYN-LMVCSKNHNNKPME-EFVLMSPAPVDTAAKLSSIYIT 901
               L++        P   E  L + A V +   L  +YI 
Sbjct: 449 TQAFLVLREHWLRFDPTLIEEALFAFALVLSWLNL--LYIF 487

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 58.4 bits (141), Expect = 1e-08
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 175
           +TPLH+A   G +QV ++LL+ GA     D  G+ P+ +A +N F EV Q+  R
Sbjct: 116 RTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSR 169

Length = 664

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 58.4 bits (141), Expect = 1e-08
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
           +TPLH+A   G +QV ++LL+ GA     D  G+ P+ +A +N F EV Q+  R
Sbjct: 116 RTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSR 169

Length = 664

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 56.9 bits (137), Expect = 3e-08
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           G  P+ IA      +++  +L   A  +V D  G S LH AAE+G       L+ H   I
Sbjct: 157 GCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHI 216

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE-AGQLQVCKL 139
            +K + G T LH A ++  +     L+++  A I+   +   TPLH A      + +  +
Sbjct: 217 MNKCKNGFTPLHNAIIHNRS-AIELLINN--ASINDQDIDGSTPLHHAINPPCDIDIIDI 273

Query: 140 LLDLGASIDATDDQGQKPIHVA 161
           LL   A I   D++G+ PI  A
Sbjct: 274 LLYHKADISIKDNKGENPIDTA 295

Length = 434

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 56.2 bits (136), Expect = 4e-08
 Identities = 49/233 (21%), Positives = 96/233 (41%), Gaps = 31/233 (13%)

Query: 58  LHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLC----RFLVHDHAAV 113
           L+LA E   + V   LL + A INS ++   T LH  +   Y          L+ ++ A 
Sbjct: 39  LYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGAN 98

Query: 114 IDILTLRKQTPLHLAAEA--GQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFP--EV 169
           ++       TPL  A         + + LLD GA+++  +  G+  +H+  ++N    ++
Sbjct: 99  VNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKI 158

Query: 170 AQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPL 228
            ++ +      + A  +                 +  L+     GV I+ ++     TPL
Sbjct: 159 LKLLID-KGVDINAKNR-----------------VNYLLS---YGVPINIKDVYGF-TPL 196

Query: 229 QLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281
             A    +   V+ L+  GA+    NK G T +H+A  N + ++ + + ++  
Sbjct: 197 HYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGP 249

Length = 422

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 56.5 bits (136), Expect = 4e-08
 Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 17/244 (6%)

Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINS 82
           TPL+ A   G  ++V   + + A ++  + +    L  A + G   +   L+      N 
Sbjct: 37  TPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLI-----DNG 91

Query: 83  KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 142
              V  + L +  +    D+ + ++ D    ++I     +T LH A + G L+  K+L +
Sbjct: 92  ---VDTSILPIPCIEK--DMIKTIL-DCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFE 145

Query: 143 LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVG 202
            GA ++  DD G  PIH+A ++NF ++ ++ L    +       +G +  H AA  G   
Sbjct: 146 YGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLE-KGAYANVKDNNGESPLHNAAEYGDYA 204

Query: 203 VIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVH 262
            I+ L+      +   +N     TPL  A    H      L+   AS  D++  G T +H
Sbjct: 205 CIKLLIDHGNHIMNKCKNGF---TPLHNAII--HNRSAIELLINNASINDQDIDGSTPLH 259

Query: 263 LAAQ 266
            A  
Sbjct: 260 HAIN 263

Length = 434

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 49.5 bits (119), Expect = 7e-08
 Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)

Query: 371 GYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 425
           G   LH A   G + +V  LL +  D+ ++ D++G T LHIAA +G+L+++++LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRT-DEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 55.4 bits (133), Expect = 9e-08
 Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 38/188 (20%)

Query: 5   MSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEH 64
             G        K    G TPL +A     ++++  ++   A  D+ + +  S LHLA   
Sbjct: 89  DLGKFADDVFYKD---GMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMM 145

Query: 65  GYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTP 124
           G +K  + L+ HKA ++ +                 D C                   TP
Sbjct: 146 GDIKGIELLIDHKACLDIE-----------------DCCGC-----------------TP 171

Query: 125 LHLAAEAGQLQVCKLLLDLGASIDATDDQGQ-KPIHVAAQNNFPEVAQIFLRAHPSLVTA 183
           L +A   G + +CK+LLD GA+ID     G    +  A +NN  ++ ++F++        
Sbjct: 172 LIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM 231

Query: 184 TTKDGNTC 191
              +G  C
Sbjct: 232 FMIEGEEC 239

Length = 413

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 55.0 bits (133), Expect = 1e-07
 Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 26/233 (11%)

Query: 237 ANVVRVLVKAGASCTDENKTGFTA--VHLAAQNGHNQVLEEMRSSKA-LNVYSKKLGVTA 293
            +V+++L+KAGA    ++K G T   V+L+  N + +V+  +    A +N      G+T 
Sbjct: 97  LDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNA-LDLYGMTP 155

Query: 294 LHVAAYFGQAD--TVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYS--GNE 349
           L V      A+   +R L+        +D                 + LH    S     
Sbjct: 156 LAVLLKSRNANVELLRLLIDAG-----ADVYAVDDR--------FRSLLHHHLQSFKPRA 202

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHV--TVVGLLLSRAADLLQSADKNGKT 407
            +VR L+  AG    A T   G  PLH    G     ++V  LL      + + ++ G+T
Sbjct: 203 RIVRELI-RAGCDPAA-TDMLGNTPLHSMATGSSCKRSLVLPLLIAGIS-INARNRYGQT 259

Query: 408 CLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQK 460
            LH AA   + +    L+  GA+INA    G   +    R  +   +   L K
Sbjct: 260 PLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAK 312

Length = 471

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 54.9 bits (132), Expect = 1e-07
 Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 50/288 (17%)

Query: 124 PLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS---- 179
           PLH A EA  L V K LL  G +++  D +   P+H+  +              P+    
Sbjct: 40  PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICK-------------EPNKLGM 86

Query: 180 --LVTATTKD--GNTCAHIAAM--QGSVGVIEELM--KFDRSGVISARNRVTEATPLQLA 231
             ++ +  K     T   I       +V + + ++  ++     I       ++    + 
Sbjct: 87  KEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIE 146

Query: 232 AEGGHANVVRVLVKAGASCTDENK-TGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLG 290
           AE     + ++L+  GA    +++  G TA+H A +N  +Q L E+  S   NV      
Sbjct: 147 AE-----ITKLLLSYGADINMKDRHKGNTALHYATEN-KDQRLTELLLSYGANVNIPDKT 200

Query: 291 -VTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLA-AYSGN 348
             + LH A        V  LL +           GAS   +   + G TPLH++  Y  +
Sbjct: 201 NNSPLHHAVKHYNKPIVHILLEN-----------GAST--DARDKCGNTPLHISVGYCKD 247

Query: 349 ENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAAD 396
            ++++LLL   GV V+A++   G   LH +          LLL   AD
Sbjct: 248 YDILKLLLEH-GVDVNAKSYILGLTALHSSIKSERKL--KLLLEYGAD 292

Length = 477

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 55.0 bits (132), Expect = 1e-07
 Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 3/219 (1%)

Query: 32  GHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTAL 91
           G +++   +L+     +    +G S + LA +    +    L+ H A  + K     + L
Sbjct: 13  GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESEL 72

Query: 92  HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD 151
           H A   G       L+       D+      TPLHLA    +L + KLL+  GA  D  +
Sbjct: 73  HDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPN 132

Query: 152 DQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFD 211
                P+H+A      +  ++ +  H + +      G T   IA  +G + + + L+  D
Sbjct: 133 TDKFSPLHLAVMMGDIKGIELLID-HKACLDIEDCCGCTPLIIAMAKGDIAICKMLL--D 189

Query: 212 RSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASC 250
               I    +      L  A E    ++VR+ +K GA C
Sbjct: 190 SGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADC 228

Length = 413

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 54.2 bits (130), Expect = 2e-07
 Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 4/190 (2%)

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT 182
           +P+ LA +    +  KLL+  GA  D      +  +H A +    +  +  L        
Sbjct: 37  SPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADD 96

Query: 183 ATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV 242
              KDG T  H+A +   + +++ L+       I   ++ +   PL LA   G    + +
Sbjct: 97  VFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFS---PLHLAVMMGDIKGIEL 153

Query: 243 LVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA-LNVYSKKLGVTALHVAAYFG 301
           L+   A    E+  G T + +A   G   + + +  S A ++ + K   V AL  A    
Sbjct: 154 LIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENN 213

Query: 302 QADTVRELLS 311
           + D VR  + 
Sbjct: 214 KIDIVRLFIK 223

Length = 413

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 54.9 bits (132), Expect = 2e-07
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 341 HLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQS 400
            LAA SG+    R+LL + G   + +   +G  PLH+AC  GHV VV +LL   AD    
Sbjct: 88  QLAA-SGDAVGARILL-TGGADPNCR-DYDGRTPLHIACANGHVQVVRVLLEFGAD-PTL 143

Query: 401 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARS 441
            DK+GKT L +A  +G  ++V++L           + GA +
Sbjct: 144 LDKDGKTPLELAEENGFREVVQLLSRHSQCHF---ELGANA 181

Length = 664

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 18/33 (54%), Positives = 27/33 (81%)

Query: 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDK 436
           +G T LH+AA +GHL++V++LL  GA++NA DK
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 18/33 (54%), Positives = 27/33 (81%)

Query: 496 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDK 528
           +G T LH+AA +GHL++V++LL  GA++NA DK
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           G T LH AA SG   +V+ LL   GV ++    E+G   LH+A   G++ V+ LLL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEK-GVDINRTD-EDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 22/54 (40%), Positives = 32/54 (59%)

Query: 21 GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
          G T L  A   G +ELV  +L     ++  D++G +ALH+AAE+G L+V   LL
Sbjct: 1  GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 17/69 (24%)

Query: 499 TCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG 558
           T LH AA  G L++V+ LL +G +IN TD+                  G TALH+AA NG
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDED-----------------GNTALHIAAENG 45

Query: 559 YADLCRFLV 567
             ++ + L+
Sbjct: 46  NLEVLKLLL 54

Length = 54

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 53.3 bits (128), Expect = 5e-07
 Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 31/140 (22%)

Query: 19  SIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSAL-------H------------ 59
           S G TPL IA ++G+ + V  +L +   V + D  G +AL       H            
Sbjct: 556 SKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFAS 615

Query: 60  ------------LAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 107
                        AA+   L     LL     ++S+   G TAL +A    + D+ R L+
Sbjct: 616 ISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLI 675

Query: 108 HDHAAVIDILTLRKQTPLHL 127
            + A V    T    +P  L
Sbjct: 676 MNGADVDKANTDDDFSPTEL 695

Length = 823

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 47.0 bits (112), Expect = 6e-07
 Identities = 16/56 (28%), Positives = 27/56 (48%)

Query: 106 LVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 161
           L+      ++       TPLHLAA+ G L++ + LL  G  ++  D  G   + +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 47.0 bits (112), Expect = 6e-07
 Identities = 16/56 (28%), Positives = 27/56 (48%)

Query: 566 LVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 621
           L+      ++       TPLHLAA+ G L++ + LL  G  ++  D  G   + +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 46.5 bits (111), Expect = 7e-07
 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 87  GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 141
           GRTALH AA++G  +L ++L+ +    I+       T LH+AAE G L+V KLLL
Sbjct: 1   GRTALHKAAISGRLELVKYLL-EKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 46.5 bits (111), Expect = 7e-07
 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 547 GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 601
           GRTALH AA++G  +L ++L+ +    I+       T LH+AAE G L+V KLLL
Sbjct: 1   GRTALHKAAISGRLELVKYLL-EKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 51.9 bits (124), Expect = 1e-06
 Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 28/173 (16%)

Query: 484 SRAADLLQSADKNGKTCLHI-----------AATHGHLQMVEVLLGQGAEINATD-KVCD 531
           S   + ++   KN   C++I           A   G  ++VE+ +  GA+IN  + K+  
Sbjct: 11  SGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPH 70

Query: 532 ALLT------HKA----FINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK 581
            LLT      H        N    V  + L +  +    D+ + ++ D    ++I     
Sbjct: 71  PLLTAIKIGAHDIIKLLIDNG---VDTSILPIPCIEK--DMIKTIL-DCGIDVNIKDAEL 124

Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           +T LH A + G L+  K+L + GA ++  DD G  PIH+A ++NF ++ ++ L
Sbjct: 125 KTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLL 177

Length = 434

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 18/31 (58%), Positives = 22/31 (70%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDD 152
            TPLHLAA  G L+V KLLL+ GA ++A D 
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 18/31 (58%), Positives = 22/31 (70%)

Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDD 612
            TPLHLAA  G L+V KLLL+ GA ++A D 
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 51.4 bits (123), Expect = 2e-06
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 376 HLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 435
            LA  G  V    +LL+  AD     D +G+T LHIA  +GH+Q+V VLL  GA+    D
Sbjct: 88  QLAASGDAVGA-RILLTGGADP-NCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLD 145

Query: 436 KGGARSIHTAARYGHVGIINTLL 458
           K G   +  A   G   ++  L 
Sbjct: 146 KDGKTPLELAEENGFREVVQLLS 168

Length = 664

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 21/56 (37%), Positives = 31/56 (55%)

Query: 390 LLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTA 445
           LL      L + D NG T LH+AA +G L++V+ LL  G ++N  D  G  ++  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 49.9 bits (119), Expect = 6e-06
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 18/95 (18%)

Query: 472 ACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCD 531
           A G      +LL+  AD     D +G+T LHIA  +GH+Q+V VLL  GA+    D    
Sbjct: 91  ASGDAVGARILLTGGADP-NCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLD---- 145

Query: 532 ALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
                        + G+T L LA  NG+ ++ + L
Sbjct: 146 -------------KDGKTPLELAEENGFREVVQLL 167

Length = 664

>gnl|CDD|165103 PHA02736, PHA02736, Viral ankyrin protein; Provisional

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)

Query: 489 LLQSADKNGKTCLHIAATHGHLQMVE---VLLGQGAEINATDKVCDALLTHKAFINSKSR 545
           L+   +++GK C+HI +        E   +L+  GA+IN  ++V                
Sbjct: 47  LVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERV---------------- 90

Query: 546 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA 605
            G T LH+A      +L  +L +     ++IL    +TP ++A E    ++  +L   GA
Sbjct: 91  FGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGA 150

Query: 606 SID 608
              
Sbjct: 151 QCK 153

Length = 154

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 48.3 bits (115), Expect = 2e-05
 Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 21/184 (11%)

Query: 195 AAMQGSVGVIEELMKFDRSGVIS-ARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDE 253
            A  G+  ++EEL+K      I  ++ R    TPL +AA  G+ + V VL+K   +    
Sbjct: 532 VASTGNAALLEELLKAKLDPDIGDSKGR----TPLHIAASKGYEDCVLVLLKHACNVHIR 587

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHV 313
           +  G TA+  A    H+++   +    +++          L  AA       ++ELL   
Sbjct: 588 DANGNTALWNAISAKHHKIFRILYHFASIS--DPHAAGDLLCTAAKRNDLTAMKELLKQG 645

Query: 314 PGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYN 373
                 D               G T L +A    + ++VRLL+ + G  VD    ++ ++
Sbjct: 646 LNVDSED-------------HQGATALQVAMAEDHVDMVRLLIMN-GADVDKANTDDDFS 691

Query: 374 PLHL 377
           P  L
Sbjct: 692 PTEL 695

Length = 823

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 26/78 (33%)

Query: 440 RSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKT 499
            ++H AA  G + ++  LL+KG  ++ T                          D++G T
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRT--------------------------DEDGNT 36

Query: 500 CLHIAATHGHLQMVEVLL 517
            LHIAA +G+L+++++LL
Sbjct: 37  ALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 18/53 (33%), Positives = 28/53 (52%)

Query: 42 NNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLA 94
          +    ++  D  G + LHLAA++G L++   LL     +N +   G TAL LA
Sbjct: 4  HGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 20/53 (37%), Positives = 28/53 (52%)

Query: 482 LLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALL 534
           LL      L + D NG T LH+AA +G L++V+ LL  G ++N  D      L
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTAL 53

Length = 56

>gnl|CDD|222925 PHA02743, PHA02743, Viral ankyrin protein; Provisional

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 19/135 (14%)

Query: 483 LSRAADLLQSADKNGKTCLHIAATH---GHLQMVEVLLGQGAEINATDKVCDALLTHKAF 539
           +S    LL   D +G+ C H+ A +     +  +E+L+  GA+INA +            
Sbjct: 43  ISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARE------------ 90

Query: 540 INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 599
                  G T LH+AA     +L  +L       +  +  + +T  H+A +    ++ ++
Sbjct: 91  ----LGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEI 146

Query: 600 LLDLGASIDATDDQG 614
           L   GA  D     G
Sbjct: 147 LRANGAVCDDPLSIG 161

Length = 166

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 18/49 (36%), Positives = 30/49 (61%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
           T L  AA  G   +V+ L++ G      ++ G TA+H+AA+NG+ +VL+
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLK 51

Length = 54

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 47.2 bits (112), Expect = 4e-05
 Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 20/173 (11%)

Query: 264 AAQNGHNQVLEEM-RSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPP 322
            A  G+  +LEE+ ++    ++   K G T LH+AA  G  D V  LL H       D  
Sbjct: 532 VASTGNAALLEELLKAKLDPDIGDSK-GRTPLHIAASKGYEDCVLVLLKHACNVHIRDA- 589

Query: 323 TGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGG 382
                       +G T L  A  + +  + R+L + A +  D        + L  A    
Sbjct: 590 ------------NGNTALWNAISAKHHKIFRILYHFASIS-DPHA---AGDLLCTAAKRN 633

Query: 383 HVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 435
            +T +  LL +  ++  S D  G T L +A    H+ MV +L+  GA+++  +
Sbjct: 634 DLTAMKELLKQGLNV-DSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKAN 685

Length = 823

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 47.0 bits (112), Expect = 5e-05
 Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 33/174 (18%)

Query: 20  IGWTPLLIACNRG-HMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKA 78
           +G + L +A     ++EL   +LN   R  V    G + LH  +   Y+   +A+L H  
Sbjct: 51  LGRSALFVAAIENENLELTELLLNLSCRGAV----GDTLLHAISL-EYVDAVEAILLHLL 105

Query: 79  FINSKSR--------------VGRTALHLAAMNGYADLCRFLVHDHAAV------IDILT 118
               KS                G TALHLAA     ++ + L+   A+V         + 
Sbjct: 106 AAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVK 165

Query: 119 LRKQT-------PLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN 165
            +          PL+ AA  G   +  LL +  A I   D  G   +H+    N
Sbjct: 166 SQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMEN 219

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 40.6 bits (96), Expect = 6e-05
 Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%)

Query: 336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQT 367
           G TPLHLAA +G+  VV+LLL  AG  V+A+ 
Sbjct: 2   GNTPLHLAARNGHLEVVKLLL-EAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165103 PHA02736, PHA02736, Viral ankyrin protein; Provisional

 Score = 44.1 bits (104), Expect = 6e-05
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 4/103 (3%)

Query: 50  FDQEGRSALHLAAEHGYL---KVCDALLTHKAFINSKSRV-GRTALHLAAMNGYADLCRF 105
           +++ G+  +H+ +        +    L+   A IN K RV G T LH+A      +L  +
Sbjct: 51  YNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATW 110

Query: 106 LVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID 148
           L +     ++IL    +TP ++A E    ++  +L   GA   
Sbjct: 111 LCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153

Length = 154

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 45.8 bits (108), Expect = 8e-05
 Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 9/182 (4%)

Query: 132 GQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI-FLRAHPSLVTATTKDGNT 190
           G+L + + LLD+G + +     G  PI +A +  F +   I  L  H ++      D  +
Sbjct: 13  GELDIARRLLDIGINPNFEIYDGISPIKLAMK--FRDSEAIKLLMKHGAIPDVKYPDIES 70

Query: 191 CAHIAAMQGSVGVIEELMKFDR--SGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGA 248
             H A  +G V  +EEL+   +    V          TPL LA      +++++L+  GA
Sbjct: 71  ELHDAVEEGDVKAVEELLDLGKFADDVFYKDGM----TPLHLATILKKLDIMKLLIARGA 126

Query: 249 SCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRE 308
                N   F+ +HLA   G  + +E +   KA        G T L +A   G     + 
Sbjct: 127 DPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKM 186

Query: 309 LL 310
           LL
Sbjct: 187 LL 188

Length = 413

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 40.3 bits (95), Expect = 8e-05
 Identities = 16/30 (53%), Positives = 27/30 (90%)

Query: 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
           +G+T LH+AA +G+L++V++LL +GA+INA
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 40.3 bits (95), Expect = 8e-05
 Identities = 16/30 (53%), Positives = 27/30 (90%)

Query: 496 NGKTCLHIAATHGHLQMVEVLLGQGAEINA 525
           +G+T LH+AA +G+L++V++LL +GA+INA
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 44.0 bits (103), Expect = 1e-04
 Identities = 18/69 (26%), Positives = 30/69 (43%)

Query: 11  SKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVC 70
               N +   G TPL  A   G  ++V  +L   A  +  +  G +AL  AA++G +++ 
Sbjct: 137 LDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELV 196

Query: 71  DALLTHKAF 79
             LL     
Sbjct: 197 KLLLDKGLH 205

Length = 235

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 13/67 (19%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
           G TALH AA  G+ + V+ LL             G         E G T LH+AA +GN 
Sbjct: 1   GRTALHKAAISGRLELVKYLLEK-----------GVDIN--RTDEDGNTALHIAAENGNL 47

Query: 350 NVVRLLL 356
            V++LLL
Sbjct: 48  EVLKLLL 54

Length = 54

>gnl|CDD|222925 PHA02743, PHA02743, Viral ankyrin protein; Provisional

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 6/126 (4%)

Query: 34  MELVNTMLNNHARVDVFDQEGRSALHLAAEH----GYLKVCDALLTHKAFINSKSR-VGR 88
           ME+   +  +   +  +D  GR   H+ A +      +K+ + L+   A IN++    G 
Sbjct: 37  MEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKI-ELLVNMGADINARELGTGN 95

Query: 89  TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID 148
           T LH+AA     +L  +L       +  +  + +T  H+A +    ++ ++L   GA  D
Sbjct: 96  TLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCD 155

Query: 149 ATDDQG 154
                G
Sbjct: 156 DPLSIG 161

Length = 166

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 356 LNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIA 412
           L   G      T  NG  PLHLA   G + +V  LL    DL    D +G T L +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLR-DSDGLTALDLA 56

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLA 264
           TPL LAA+ G   +V+ L+K G      +  G TA+ LA
Sbjct: 18  TPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 43.7 bits (103), Expect = 5e-04
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTH 76
           G TPL IAC  GH+++V  +L   A   + D++G++ L LA E+G+ +V   L  H
Sbjct: 115 GRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRH 170

Length = 664

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 43.1 bits (102), Expect = 7e-04
 Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 24/173 (13%)

Query: 257 GFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGT 316
           G +A+ +AA    N  L E+  + +       +G T LH  +     D V  +L H+   
Sbjct: 52  GRSALFVAAIENENLELTELLLNLSCRGA---VGDTLLHAIS-LEYVDAVEAILLHL--- 104

Query: 317 VKSDPPTGASFL--GELGSE--SGMTPLHLAAYSGNENVVRLLLNS-AGVQVDA------ 365
           + +   +G   L   +  SE   G+T LHLAA+  N  +V+LLL   A V   A      
Sbjct: 105 LAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFV 164

Query: 366 QTQENGY-----NPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAA 413
           ++Q         +PL+ A   G  ++V LL    AD+L +AD  G T LH+  
Sbjct: 165 KSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADIL-TADSLGNTLLHLLV 216

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 42.9 bits (101), Expect = 8e-04
 Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 7/145 (4%)

Query: 106 LVHDHAAVIDILTLRK-QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQN 164
           L+  + A I++    K  T LH A E    ++ +LLL  GA+++  D     P+H A ++
Sbjct: 152 LLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKH 211

Query: 165 NFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL-MKFDRSGVISARNRVT 223
               +  I L  + +   A  K GNT  HI+   G     + L +  +    ++A++ + 
Sbjct: 212 YNKPIVHILLE-NGASTDARDKCGNTPLHISV--GYCKDYDILKLLLEHGVDVNAKSYIL 268

Query: 224 EATPLQLAAEGGHANVVRVLVKAGA 248
             T L  + +      +++L++ GA
Sbjct: 269 GLTALHSSIKS--ERKLKLLLEYGA 291

Length = 477

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 37.2 bits (87), Expect = 8e-04
 Identities = 16/30 (53%), Positives = 25/30 (83%)

Query: 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
           +G T LH+AA +G+L++V++LL  GA+INA
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 37.2 bits (87), Expect = 8e-04
 Identities = 16/30 (53%), Positives = 25/30 (83%)

Query: 496 NGKTCLHIAATHGHLQMVEVLLGQGAEINA 525
           +G T LH+AA +G+L++V++LL  GA+INA
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.1 bits (87), Expect = 9e-04
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADL 397
           +G  PLHLA   GH+ VV LLL   AD+
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADV 28

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.1 bits (87), Expect = 0.001
 Identities = 13/33 (39%), Positives = 22/33 (66%)

Query: 53 EGRSALHLAAEHGYLKVCDALLTHKAFINSKSR 85
          +G + LHLAA +G+L+V   LL   A +N++ +
Sbjct: 1  DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 41.6 bits (98), Expect = 0.002
 Identities = 40/154 (25%), Positives = 56/154 (36%), Gaps = 37/154 (24%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVF--------DQE------GRSALHLAAEHGY 66
           G T L +A +R + E+V  +L   A V            Q       G S L+ AA  G 
Sbjct: 128 GITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGS 187

Query: 67  LKVCDALLTHKAFINSKSRVGRTALHLAAMN-------------------GYADLCRFLV 107
             +   L    A I +   +G T LHL  M                       D  R   
Sbjct: 188 PSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLR--- 244

Query: 108 HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 141
            D   +  IL  +  TPL LAA+ G++ + +L L
Sbjct: 245 -DSKELEVILNHQGLTPLKLAAKEGRIVLFRLKL 277

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 41.4 bits (97), Expect = 0.002
 Identities = 22/51 (43%), Positives = 31/51 (60%)

Query: 224 EATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
             TPL +A   GH  VVRVL++ GA  T  +K G T + LA +NG  +V++
Sbjct: 115 GRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQ 165

Length = 664

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 87  GRTALHLAAMNGYADLCRFLVHDHAAVIDILT 118
           G T LHLAA NG+ ++ + L+ +  A ++   
Sbjct: 2   GNTPLHLAARNGHLEVVKLLL-EAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 547 GRTALHLAAMNGYADLCRFLVHDHAAVIDILT 578
           G T LHLAA NG+ ++ + L+ +  A ++   
Sbjct: 2   GNTPLHLAARNGHLEVVKLLL-EAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENK 255
           TPL LAA  GH  VV++L++AGA     +K
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 18/49 (36%), Positives = 26/49 (53%)

Query: 13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLA 61
           LN     G TPL +A   G +ELV  +L     +++ D +G +AL LA
Sbjct: 8  DLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 20/27 (74%), Positives = 22/27 (81%)

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDA 149
           TPLHLAAE G L+V KLLLD GA I+A
Sbjct: 4   TPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 20/27 (74%), Positives = 22/27 (81%)

Query: 583 TPLHLAAEAGQLQVCKLLLDLGASIDA 609
           TPLHLAAE G L+V KLLLD GA I+A
Sbjct: 4   TPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 15/23 (65%), Positives = 18/23 (78%)

Query: 336 GMTPLHLAAYSGNENVVRLLLNS 358
           G TPLHLAA +GN  VV+LLL+ 
Sbjct: 2   GRTPLHLAAENGNLEVVKLLLDK 24

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 41.4 bits (97), Expect = 0.003
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)

Query: 126 HLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR--AHPSLVTA 183
            LAA    +   ++LL  GA  +  D  G+ P+H+A  N   +V ++ L   A P+L   
Sbjct: 88  QLAASGDAVGA-RILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL--- 143

Query: 184 TTKDGNTCAHIAAMQGSVGVIEELMK 209
             KDG T   +A   G   V++ L +
Sbjct: 144 LDKDGKTPLELAEENGFREVVQLLSR 169

Length = 664

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 80  INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLA 128
           +N+    G T LHLAA  G  +L ++L+      +++      T L LA
Sbjct: 9   LNATDGNGNTPLHLAAKYGALELVQWLLKPGVD-LNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 540 INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLA 588
           +N+    G T LHLAA  G  +L ++L+      +++      T L LA
Sbjct: 9   LNATDGNGNTPLHLAAKYGALELVQWLLKPGVD-LNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|165154 PHA02791, PHA02791, ankyrin-like protein; Provisional

 Score = 40.8 bits (95), Expect = 0.003
 Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 16/220 (7%)

Query: 77  KAFINSKSRV-----GRTALHLA-AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE 130
           K+F++SK        G +AL+ A A N    +C  L   +A  +  L L  + PLH AA 
Sbjct: 15  KSFLSSKDAFKADVHGHSALYYAIADNNVRLVCTLL---NAGALKNL-LENEFPLHQAAT 70

Query: 131 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNT 190
               ++ K+LL  G      DD+G   ++ A  +   +  ++F++ +  L+        T
Sbjct: 71  LEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKT 130

Query: 191 CAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASC 250
             + A M   V ++   +    S + S  +     + + +  + GH +++ +L+    S 
Sbjct: 131 SFYHAVMLNDVSIVSYFL----SEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTST 186

Query: 251 TDENKTGFTA-VHLAAQNGHNQVLEEMRSSKALNVYSKKL 289
              N   F   + LA  N   ++L+ +     +N+YS  L
Sbjct: 187 NTNNSLLFIPDIKLAIDNKDLEMLQALFKYD-INIYSVNL 225

Length = 284

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 40.7 bits (95), Expect = 0.004
 Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 1/84 (1%)

Query: 229 QLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKK 288
           QLAA G      R+L+  GA     +  G T +H+A  NGH QV+  +    A      K
Sbjct: 88  QLAASGDAVGA-RILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146

Query: 289 LGVTALHVAAYFGQADTVRELLSH 312
            G T L +A   G  + V+ L  H
Sbjct: 147 DGKTPLELAEENGFREVVQLLSRH 170

Length = 664

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	1015
KOG4177|consensus	1143		100.0
KOG4177|consensus	1143		100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
KOG3609|consensus	822		100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
KOG0510|consensus	929		100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
KOG3609|consensus	822		100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
KOG0510|consensus	929		100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
TIGR00870	743	trp transient-receptor-potential calcium channel p	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
KOG4412|consensus	226		100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
KOG4412|consensus	226		100.0
PHA02798	489	ankyrin-like protein; Provisional	99.98
PHA02875	413	ankyrin repeat protein; Provisional	99.98
PHA02798	489	ankyrin-like protein; Provisional	99.97
KOG3614|consensus	1381		99.97
KOG0509|consensus	600		99.96
KOG0509|consensus	600		99.96
PHA02859	209	ankyrin repeat protein; Provisional	99.94
PHA02795	437	ankyrin-like protein; Provisional	99.93
KOG4369|consensus	2131		99.93
PHA02795	437	ankyrin-like protein; Provisional	99.93
PHA02859	209	ankyrin repeat protein; Provisional	99.92
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.92
KOG4369|consensus	2131		99.92
KOG0502|consensus	296		99.9
KOG0502|consensus	296		99.9
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.88
KOG0507|consensus	854		99.88
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.86
KOG0507|consensus	854		99.86
PHA02743	166	Viral ankyrin protein; Provisional	99.85
KOG3676|consensus	782		99.85
PHA02741	169	hypothetical protein; Provisional	99.85
KOG0514|consensus	452		99.83
KOG0514|consensus	452		99.82
PHA02736	154	Viral ankyrin protein; Provisional	99.82
KOG0505|consensus	527		99.81
PHA02884	300	ankyrin repeat protein; Provisional	99.81
PHA02743	166	Viral ankyrin protein; Provisional	99.8
KOG0505|consensus	527		99.79
PHA02741	169	hypothetical protein; Provisional	99.78
PHA02884	300	ankyrin repeat protein; Provisional	99.77
KOG0512|consensus	228		99.75
KOG0512|consensus	228		99.73
PHA02736	154	Viral ankyrin protein; Provisional	99.72
KOG0195|consensus	448		99.71
KOG0195|consensus	448		99.67
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.64
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.62
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.61
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.59
KOG3676|consensus	782		99.58
KOG4214|consensus	117		99.49
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.37
KOG4214|consensus	117		99.35
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.35
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.31
KOG0515|consensus	752		99.26
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.24
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.23
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.23
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.21
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.19
KOG1710|consensus	396		99.16
KOG1710|consensus	396		99.15
KOG0515|consensus	752		99.09
KOG3614|consensus	1381		98.84
PF13606	30	Ank_3: Ankyrin repeat	98.65
KOG0783|consensus	1267		98.62
PF08344	63	TRP_2: Transient receptor ion channel II; InterPro	98.56
KOG0782|consensus	1004		98.5
KOG0818|consensus	669		98.48
KOG0506|consensus	622		98.48
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.48
PF13606	30	Ank_3: Ankyrin repeat	98.47
KOG0506|consensus	622		98.47
KOG0783|consensus	1267		98.45
KOG0782|consensus	1004		98.41
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.39
KOG0511|consensus	516		98.12
KOG0818|consensus	669		98.08
KOG0522|consensus	560		98.07
KOG2384|consensus	223		98.0
KOG0522|consensus	560		97.99
KOG0705|consensus	749		97.94
KOG0705|consensus	749		97.9
KOG2384|consensus	223		97.88
KOG0521|consensus	785		97.86
KOG0511|consensus	516		97.59
KOG0520|consensus	975		97.54
KOG0521|consensus	785		97.49
KOG0520|consensus	975		97.31
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.28
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	95.64
KOG2505|consensus	591		95.53
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.5
KOG2505|consensus	591		95.39
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.25
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	94.16
PLN03223	1634	Polycystin cation channel protein; Provisional	91.88
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	91.15
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	90.85
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	87.57
PF08016	425	PKD_channel: Polycystin cation channel; InterPro:	84.01
KOG3599|consensus	798		81.5

>KOG4177|consensus

Probab=100.00  E-value=3e-59  Score=547.54  Aligned_cols=586  Identities=35%  Similarity=0.486  Sum_probs=400.4

Q ss_pred             hhHhhHhhccCCCCCCc-HHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q psy14874          7 GTEISKALNKQTSIGWT-PLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSR   85 (1015)
Q Consensus         7 ~~~~~~~~n~~~~~g~t-~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~   85 (1015)
                      +++..-.....|..|++ .||.||++|+.+.++.|+++..+.+...+.+.||+|+|+-.|+.+++++|+..|+.++....
T Consensus         6 ~~~~~a~~~~~~~~~~~~~l~~a~r~~~~~~~~~l~~~e~~~~~~sk~~~~pl~~aa~~~~~~v~~~ll~~~a~v~~~~~   85 (1143)
T KOG4177|consen    6 HDRAVAVLLENDVKGRLPALHIAARNDDTNAAKLLLQNEHNADVDSKSGFTPLHIAAHYGNENVAELLLNRGAIVNATAR   85 (1143)
T ss_pred             cccccccccccCccccchHHHHHHhccchhhcccccccccccchhcccccCHHHHHhhhhhhhhhhhhhccccccCcccc
Confidence            33444444444545544 36666666666666666665544444444556666666666666666666666666666666


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH----
Q psy14874         86 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA----  161 (1015)
Q Consensus        86 ~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A----  161 (1015)
                      .|.||||.|+..|+.++++.|+ ..+..++..+..|.||||.|+..|+.+++++|+..|++++.+|+.|.||+++|    
T Consensus        86 ~~~~plh~a~~~~~a~~v~~ll-~~ga~~~~~~~~~lTpLh~aa~~g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~~~  164 (1143)
T KOG4177|consen   86 NGITPLHVASKRGDAEMVKLLL-CRGAQIDARDRDGLTPLHCAARKGHVQVIELLLQHGAPINIKTKNGLSPLHMAAQVA  164 (1143)
T ss_pred             cCccHHHHHHhhcchhHHHHHH-hccCchhhcccCCCcchhhhcccccHHHHHHHHHccCCCcccccCCCCchhhhcchh
Confidence            6666666666666666666666 34555666666666666666666666666666666666666666666655443    


Q ss_pred             -------------------HHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCC
Q psy14874        162 -------------------AQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRV  222 (1015)
Q Consensus       162 -------------------~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~  222 (1015)
                                         ...++.+++++++....+ ....+.+|.||+|.||..+..++++.++.++.+   ....+.
T Consensus       165 ~~~ll~~~~~~d~l~~~~~~~~~~~~~~~ll~~~~~~-~~a~~~~~~tpl~~a~~~nri~~~eLll~~gad---v~a~d~  240 (1143)
T KOG4177|consen  165 CARLLLEYKAPDYLRLHVAAHCGHARVAKLLLDKKAD-PNASALNGFTPLHIACKKNRIKVVELLLKHGAD---VSAKDE  240 (1143)
T ss_pred             hhHHhhhcccchhhhhhHHhhcchHHHHhhhhcccCC-ccccccCCCCchhhhccccccceeeeeeeccCc---CCcccc
Confidence                               345666777777665554 456666777777777777777777777765544   233344


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCC
Q psy14874        223 TEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQ  302 (1015)
Q Consensus       223 ~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~  302 (1015)
                      .+.+|+|.|+..|+.+++.+|+.+|+.++..+..+.||+|.|+..+..++.++|++++++.........|+++.+...|.
T Consensus       241 ~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~  320 (1143)
T KOG4177|consen  241 SGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRLGH  320 (1143)
T ss_pred             cCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCcccccccccccChhhhhcccch
Confidence            66677777777777777777777777777777777777777777777777777777777766666667777777777777


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCC
Q psy14874        303 ADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGG  382 (1015)
Q Consensus       303 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g  382 (1015)
                      .+++..+++.+....             .....+.+|+|+++..++.++..++... +.+ .....+.+.+|+|.|+..|
T Consensus       321 ~~i~~~~l~~~~~~~-------------aar~~g~t~lHlaa~~~~~~~~~~l~~~-~~~-~~~a~~k~~~pl~la~~~g  385 (1143)
T KOG4177|consen  321 EEIVHLLLQAGATPN-------------AARTAGYTPLHLAAKEGQVEVAGALLEH-GAQ-RRQAEEKGFTPLHLAVKSG  385 (1143)
T ss_pred             HHHHHHHhhccCCcc-------------ccCcCCcccccHhhhhhhHHHHHHhhcc-ccc-cCcccccCCcchhhhcccC
Confidence            777777776654432             2345567777777777777755555542 222 2234456677777777777


Q ss_pred             CHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhC-CHHHHHHHHhcC
Q psy14874        383 HVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYG-HVGIINTLLQKG  461 (1015)
Q Consensus       383 ~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~g  461 (1015)
                      ..++++.++..|.+ .+.....|.||||.|+..++..+++.++++|++++..+..|.||+|+|+..| ..+....+++.|
T Consensus       386 ~~~~v~Lll~~ga~-~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g  464 (1143)
T KOG4177|consen  386 RVSVVELLLEAGAD-PNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYG  464 (1143)
T ss_pred             chhHHHhhhhccCC-cccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcC
Confidence            77777777777776 5666777777777777777777777777777777777777777777777777 666667777777


Q ss_pred             CCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchh--------------
Q psy14874        462 EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD--------------  527 (1015)
Q Consensus       462 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~--------------  527 (1015)
                      .+++...                          ..|.||||+|+..|+.++++.|++.++..+...              
T Consensus       465 ~~~n~~s--------------------------~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~  518 (1143)
T KOG4177|consen  465 ADPNAVS--------------------------KQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADED  518 (1143)
T ss_pred             CCcchhc--------------------------cccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhh
Confidence            7666542                          444555555555555555555555443332221              


Q ss_pred             --hHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCC
Q psy14874        528 --KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA  605 (1015)
Q Consensus       528 --~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga  605 (1015)
                        ..+..++.++++++.++..|.||||.|+..|+.++|++|++++.+ .+.++..|+||||.||..|+.+|+.+|+++|+
T Consensus       519 ~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAd-v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA  597 (1143)
T KOG4177|consen  519 TVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGAD-VNAKDKLGYTPLHQAAQQGHNDIAELLLKHGA  597 (1143)
T ss_pred             hHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCcc-ccccCCCCCChhhHHHHcChHHHHHHHHHcCC
Confidence              133444444555577888999999999999999999999987665 47778999999999999999999999999999


Q ss_pred             CCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCcc
Q psy14874        606 SIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL  640 (1015)
Q Consensus       606 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~~  640 (1015)
                      ++|..|.+|.|||++|+..++.++++.+...+...
T Consensus       598 ~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~  632 (1143)
T KOG4177|consen  598 SVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATP  632 (1143)
T ss_pred             CCCcccccCcchhHHHHHhcccchhhHHHhccCcc
Confidence            99999999999999999999999999999877663

>KOG4177|consensus

Probab=100.00  E-value=1.8e-57  Score=532.65  Aligned_cols=556  Identities=34%  Similarity=0.499  Sum_probs=481.6

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCH
Q psy14874         55 RSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL  134 (1015)
Q Consensus        55 ~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~  134 (1015)
                      .-.||.|+++|..+.++.|+++....+...+.+.||+|+|+-.|+.+++++|+ +.+..++....+|.||||.|+..|+.
T Consensus        22 ~~~l~~a~r~~~~~~~~~l~~~e~~~~~~sk~~~~pl~~aa~~~~~~v~~~ll-~~~a~v~~~~~~~~~plh~a~~~~~a  100 (1143)
T KOG4177|consen   22 LPALHIAARNDDTNAAKLLLQNEHNADVDSKSGFTPLHIAAHYGNENVAELLL-NRGAIVNATARNGITPLHVASKRGDA  100 (1143)
T ss_pred             chHHHHHHhccchhhcccccccccccchhcccccCHHHHHhhhhhhhhhhhhh-ccccccCcccccCccHHHHHHhhcch
Confidence            35799999999999999999988766666668999999999999999999999 56888899999999999999999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHH--------------------
Q psy14874        135 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHI--------------------  194 (1015)
Q Consensus       135 ~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~--------------------  194 (1015)
                      ++++.|+..|+.++..|..+.||||.|+..|+.+++++|+..+. ....++++|.||+++                    
T Consensus       101 ~~v~~ll~~ga~~~~~~~~~lTpLh~aa~~g~~~~~~~ll~~~a-~~~~k~~~g~t~l~~a~~~~~~~ll~~~~~~d~l~  179 (1143)
T KOG4177|consen  101 EMVKLLLCRGAQIDARDRDGLTPLHCAARKGHVQVIELLLQHGA-PINIKTKNGLSPLHMAAQVACARLLLEYKAPDYLR  179 (1143)
T ss_pred             hHHHHHHhccCchhhcccCCCcchhhhcccccHHHHHHHHHccC-CCcccccCCCCchhhhcchhhhHHhhhcccchhhh
Confidence            99999999999999999999999999999999999999999994 478899999888755                    


Q ss_pred             ---HHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Q psy14874        195 ---AAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQ  271 (1015)
Q Consensus       195 ---A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~  271 (1015)
                         +...++.++++.++....+.   ......+.||+|.|+..+.+++++.++.+|+++...|..|.+|+|.|+..|+.+
T Consensus       180 ~~~~~~~~~~~~~~ll~~~~~~~---~a~~~~~~tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~  256 (1143)
T KOG4177|consen  180 LHVAAHCGHARVAKLLLDKKADP---NASALNGFTPLHIACKKNRIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLD  256 (1143)
T ss_pred             hhHHhhcchHHHHhhhhcccCCc---cccccCCCCchhhhccccccceeeeeeeccCcCCcccccCccHHHHHHhccchh
Confidence               45678999999999865543   344557889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHH
Q psy14874        272 VLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENV  351 (1015)
Q Consensus       272 iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~  351 (1015)
                      ++.+++.+++.....+..+.||+|.|+..+..+..+++++++....             .......|++|.|...|..++
T Consensus       257 i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~-------------~~~~~~kt~l~~a~~~g~~~i  323 (1143)
T KOG4177|consen  257 IVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVL-------------AKARDDQTPLHIASRLGHEEI  323 (1143)
T ss_pred             HHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCcccc-------------cccccccChhhhhcccchHHH
Confidence            9999999999999999999999999999999999999999876553             235678999999999999999


Q ss_pred             HHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCc
Q psy14874        352 VRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEI  431 (1015)
Q Consensus       352 v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i  431 (1015)
                      ++.++. .+..++.. ...|.+|+|.++..++.++..++...++. ....+..|.||+|.|+..|..+++++++.+|+++
T Consensus       324 ~~~~l~-~~~~~~aa-r~~g~t~lHlaa~~~~~~~~~~l~~~~~~-~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~  400 (1143)
T KOG4177|consen  324 VHLLLQ-AGATPNAA-RTAGYTPLHLAAKEGQVEVAGALLEHGAQ-RRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADP  400 (1143)
T ss_pred             HHHHhh-ccCCcccc-CcCCcccccHhhhhhhHHHHHHhhccccc-cCcccccCCcchhhhcccCchhHHHhhhhccCCc
Confidence            999997 47777754 56799999999999999999999888887 4567889999999999999999999999999999


Q ss_pred             ccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcC-CH
Q psy14874        432 NATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG-HL  510 (1015)
Q Consensus       432 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g-~~  510 (1015)
                      +...+.|.||||.|+.+++.++++.++++|++.+..                          +..|.||+|+|+..| ..
T Consensus       401 ~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~--------------------------~~lG~T~lhvaa~~g~~~  454 (1143)
T KOG4177|consen  401 NSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAK--------------------------AKLGYTPLHVAAKKGRYL  454 (1143)
T ss_pred             ccCCCCCcceeeehhhccCcceEEEEeccCCChhhH--------------------------hhcCCChhhhhhhcccHh
Confidence            999999999999999999999999999999988754                          788999999999999 99


Q ss_pred             HHHHHHHhcCCCCcchhh----------------HHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccc
Q psy14874        511 QMVEVLLGQGAEINATDK----------------VCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVI  574 (1015)
Q Consensus       511 ~~v~~Ll~~ga~~~~~~~----------------~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~  574 (1015)
                      +....+++.|++++...+                +...++...+..+.....|.+++|.|...++..+++.++++ +...
T Consensus       455 ~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~-ga~v  533 (1143)
T KOG4177|consen  455 QIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEH-GANV  533 (1143)
T ss_pred             hhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhc-CCce
Confidence            999999999999865431                33334444445555555555555555555555555555533 4455


Q ss_pred             cccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCccccccchhhhhHHHH
Q psy14874        575 DILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL  654 (1015)
Q Consensus       575 ~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~  654 (1015)
                      +.++.+|.||||.|+..|+.++||+|+++|+|++.+|+.|+||||.|+..|+.+++.+|++++.+ ++..+.++.+....
T Consensus       534 ~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~-vna~d~~g~TpL~i  612 (1143)
T KOG4177|consen  534 DLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGAS-VNAADLDGFTPLHI  612 (1143)
T ss_pred             ehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCC-CCcccccCcchhHH
Confidence            77888899999999999999999999999999999999999999999999999999999987654 44445555555544


Q ss_pred             HHhcc
Q psy14874        655 IAAGK  659 (1015)
Q Consensus       655 ~~~~~  659 (1015)
                      .....
T Consensus       613 A~~lg  617 (1143)
T KOG4177|consen  613 AVRLG  617 (1143)
T ss_pred             HHHhc
Confidence            44333

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.7e-49  Score=478.33  Aligned_cols=470  Identities=23%  Similarity=0.280  Sum_probs=370.8

Q ss_pred             HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy14874         73 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD  152 (1015)
Q Consensus        73 Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~  152 (1015)
                      |+++|++....+..|.||||.|+..||.|+|++|++..+..+...|..|.||||+|+..++.  +..++......+....
T Consensus        27 ~~~~~~~~~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~--~~~~~~l~~~~~~~~~  104 (682)
T PHA02876         27 LHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNV--MDIVISLTLDCDIILD  104 (682)
T ss_pred             HhhhhhhhcccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCc--cccccccccchhhccc
Confidence            34456666666667777777777777777777777766655666777777888877777663  2333322222222223


Q ss_pred             CCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHH
Q psy14874        153 QGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAA  232 (1015)
Q Consensus       153 ~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~  232 (1015)
                      .+.+.+..+........++.|.+...          .+.++++..++..                     ...++++.|+
T Consensus       105 ~~~~~~~~~~~~~~~~~~~il~~~~~----------~~~~~~~~~~~~~---------------------~~~~~l~~~i  153 (682)
T PHA02876        105 IKYASIILNKHKLDEACIHILKEAIS----------GNDIHYDKINESI---------------------EYMKLIKERI  153 (682)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhc----------CCcccHHhhccch---------------------hhhHHHHHHH
Confidence            33333333322222222222222110          1122333222221                     2247788899


Q ss_pred             HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhc
Q psy14874        233 EGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSH  312 (1015)
Q Consensus       233 ~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~  312 (1015)
                      ..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.|++....+..|.||++.|+..++.++++.+++.
T Consensus       154 ~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~  233 (682)
T PHA02876        154 QQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDN  233 (682)
T ss_pred             HCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999998888888899999999999999999999987


Q ss_pred             CCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCH-HHHHHHH
Q psy14874        313 VPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHV-TVVGLLL  391 (1015)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~-~iv~~Ll  391 (1015)
                      +...                 ..+.++++.|+..++.+++++|++ .|++++.. +..|.||||+|+..++. +++++|+
T Consensus       234 ~~~~-----------------~~~~~~L~~ai~~~~~~~~~~Ll~-~g~~vn~~-d~~g~TpLh~Aa~~~~~~~iv~lLl  294 (682)
T PHA02876        234 RSNI-----------------NKNDLSLLKAIRNEDLETSLLLYD-AGFSVNSI-DDCKNTPLHHASQAPSLSRLVPKLL  294 (682)
T ss_pred             CCCC-----------------CCCcHHHHHHHHcCCHHHHHHHHH-CCCCCCCC-CCCCCCHHHHHHhCCCHHHHHHHHH
Confidence            5332                 224578999999999999999997 58888864 46799999999999986 6999999


Q ss_pred             HhcchhhcccCCCCCcHHHHHHHcC-CHHHHHHHhhCCCCcccCCCCCCCHHHHHHHh-CCHHHHHHHHhcCCCCccccc
Q psy14874        392 SRAADLLQSADKNGKTCLHIAATHG-HLQMVEVLLGQGAEINATDKGGARSIHTAARY-GHVGIINTLLQKGEKVDVTTN  469 (1015)
Q Consensus       392 ~~~~~~~~~~d~~g~t~L~~A~~~g-~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~~  469 (1015)
                      +.|++ ++..|..|.||||+|+..| +.++++.|+..|++++..|..|.||||+|+.. ++.++++.|+++|++++..  
T Consensus       295 ~~gad-in~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~--  371 (682)
T PHA02876        295 ERGAD-VNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNAR--  371 (682)
T ss_pred             HCCCC-CCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccC--
Confidence            99998 6788999999999999999 69999999999999999999999999999985 5789999999999998755  


Q ss_pred             ccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCc
Q psy14874        470 NLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRT  549 (1015)
Q Consensus       470 ~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t  549 (1015)
                                              |..|.||||+|+..|+.+++++|+++|++++                 ..+..|.|
T Consensus       372 ------------------------d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~-----------------~~~~~g~T  410 (682)
T PHA02876        372 ------------------------DYCDKTPIHYAAVRNNVVIINTLLDYGADIE-----------------ALSQKIGT  410 (682)
T ss_pred             ------------------------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-----------------ccCCCCCc
Confidence                                    7889999999999999999999999999984                 46678999


Q ss_pred             HHHHHHHcCc-HHHHHHHHhcCCccccccccCCCCHHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCh
Q psy14874        550 ALHLAAMNGY-ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG-QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFP  627 (1015)
Q Consensus       550 ~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~-~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~  627 (1015)
                      |||+|+..++ ..++++|++.+ .+++.+|..|+||||+|+..| +.+++++|++.|++++..|..|.||+++|+..+  
T Consensus       411 ~Lh~A~~~~~~~~~vk~Ll~~g-adin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~~~--  487 (682)
T PHA02876        411 ALHFALCGTNPYMSVKTLIDRG-ANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEYH--  487 (682)
T ss_pred             hHHHHHHcCCHHHHHHHHHhCC-CCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC--
Confidence            9999998766 56788888765 567899999999999999977 689999999999999999999999999999765  


Q ss_pred             HHHHHHHHhCCccc
Q psy14874        628 EVAQIFLRAHPSLV  641 (1015)
Q Consensus       628 ~~~~~ll~~~~~~~  641 (1015)
                      ++++.++..+....
T Consensus       488 ~~v~~Ll~~~a~~~  501 (682)
T PHA02876        488 GIVNILLHYGAELR  501 (682)
T ss_pred             CHHHHHHHCCCCCC
Confidence            57888888765543

>KOG3609|consensus

Probab=100.00  E-value=3.9e-50  Score=446.71  Aligned_cols=369  Identities=21%  Similarity=0.254  Sum_probs=302.2

Q ss_pred             CCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14874        438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL  517 (1015)
Q Consensus       438 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll  517 (1015)
                      +.--+..|+++|+...++..++.......                      .+++.|.-|+++|++|..+.+.|++++|+
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~l----------------------ninc~d~lGr~al~iai~nenle~~eLLl   82 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKL----------------------NINCRDPLGRLALHIAIDNENLELQELLL   82 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhcccccc----------------------chhccChHhhhceecccccccHHHHHHHh
Confidence            34456677777877777777765433111                      13566788888888888888888888888


Q ss_pred             hcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCcc---------ccccccCCCCHHHHH
Q psy14874        518 GQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV---------IDILTLRKQTPLHLA  588 (1015)
Q Consensus       518 ~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~---------~~~~~~~g~T~L~~A  588 (1015)
                      +++...                        ..+|.+|+..|..+.|+.++.+....         .......+.|||++|
T Consensus        83 ~~~~~~------------------------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLA  138 (822)
T KOG3609|consen   83 DTSSEE------------------------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLA  138 (822)
T ss_pred             cCcccc------------------------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHH
Confidence            876544                        12888888888888888888764332         122334578999999


Q ss_pred             HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC-------------------------hHHHHHHHHhCCccccc
Q psy14874        589 AEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNF-------------------------PEVAQIFLRAHPSLVTA  643 (1015)
Q Consensus       589 ~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-------------------------~~~~~~ll~~~~~~~~~  643 (1015)
                      |..+|+||+++|+++|+++..+...++.+-.+-.....                         .|.+..-++.+.++...
T Consensus       139 Ah~NnyEil~~Ll~kg~~i~~PH~~~C~C~~C~~~~~~dslhS~srin~yraLaSpa~i~LsS~DPiltAf~LS~eL~~L  218 (822)
T KOG3609|consen  139 AHLNNFEILQCLLTRGHCIPIPHDIRCECKTCKRETVTDSLHSLSRVNIYRALASPALIWLSSDDPILTAFALSWDLQQL  218 (822)
T ss_pred             HHhcchHHHHHHHHcCCCCCCCcccccCchHhhhccccCCcchHHHHHHHHHhhcHHHHHccCCcHHHHHHHHHHHHHHH
Confidence            99999999999999999999887766555444332221                         12222223333344455


Q ss_pred             cchhhhhHHHHHHhcccchhhHHHHHHHHcCCCccccccccccc-------CCchHHHHHHHhhhhHHHHHHHHHHHHHH
Q psy14874        644 TTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDR-------RNIEFLDVLIENEQKEVIAHTVVQRYLQE  716 (1015)
Q Consensus       644 ~~~~~~~~~~~~~~~~~~e~~a~~ll~~~~~~~e~~~il~~~~~-------~~~~~L~~ai~~~~k~fvah~~~q~~L~~  716 (1015)
                      ...|.|++.+|.+++.+|++|+++||++||+++|+..+|++.+.       .++++|++||+++||+||+||+||++|++
T Consensus       219 a~~E~Efk~dY~~Ls~qcq~F~v~LLdq~r~s~Ele~iLn~~~~~~~~~~~~sl~RLklAIkyeqK~FVahpNcQq~L~s  298 (822)
T KOG3609|consen  219 ASDELEFKEDYRDLSMQCQRFAVDLLDQARTSDELEMILNNRNNCPERMTRISLPRLKLAIKYEQKEFVAHPNCQQLLKS  298 (822)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHcCCCCCcccccccccHHHHHHHHHhhhheecCccHHHHHHH
Confidence            67799999999999999999999999999999999999998876       78999999999999999999999999999


Q ss_pred             HHhcc--chhHHHHHHHHHHHHhccCchhhHhhhccCCccC---CchhHHHHHhhhcHHHHHHHHHHhhcccCccc--cc
Q psy14874        717 LWQGS--LNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYN---KVPIIKFMSYLTSHMYLMFLLMLVGITPIYPV--VR  789 (1015)
Q Consensus       717 ~w~~~--~~~~~~~~l~~~~~~~l~~~~~i~~~~~~~~~~~---~~P~~~f~~~~~s~~~fl~L~~~~~~~~~~~~--~~  789 (1015)
                      +||++  .++...|.+.+.++.+++|+++++|.++|.++.|   +.||+||++|++||++||+|++++.+..++..  ..
T Consensus       299 iWy~g~R~~~~~~K~~~~~~~~~~~P~~~l~yllap~S~~G~~~r~PfmKFi~H~~Sy~~FL~LL~l~s~~~~~~~~~~~  378 (822)
T KOG3609|consen  299 VWYSGWRRKGIKPKFDAWRFLRLCFPMPSLVYLLAPMSRKGTTMRKPFMKFIAHITSYLVFLILLILASLIGFYFAWTDS  378 (822)
T ss_pred             HHhhhhhhcchHHHHHHHHHHHHHhHHHHHHHHhCCCCcccchhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence            99993  3556667888888899999999999999997777   99999999999999999999999987766533  35


Q ss_pred             CCCCcchHHHHHHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhhhhhcCC
Q psy14874        790 PNLVPYWYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEGK  852 (1015)
Q Consensus       790 ~~~~p~~~e~~~~~~v~gl~~~e~~~~~~~~~~~~~~~~wn~~~~~~~~~~~~~~~~~~~~~~  852 (1015)
                      .+++|+|+||+++.||+||+|+|++++|+.|+.+|+++||||+||+|+++|+++|++|.+++.
T Consensus       379 ~g~~p~~vE~li~~wV~G~iw~E~k~lw~~G~~~y~~~~Wn~lDf~m~siyl~s~~lr~~a~~  441 (822)
T KOG3609|consen  379 RGVTPQALEILIYLWVMGLIWEEIKELWRVGRDGYLAFWWNWLDFAMISIYLASFILRAVAWG  441 (822)
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            688999999999999999999999999999999999999999999999999999999988876

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.2e-47  Score=463.73  Aligned_cols=456  Identities=21%  Similarity=0.256  Sum_probs=364.4

Q ss_pred             ccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874         15 NKQTSIGWTPLLIACNRGHMELVNTMLNNHAR-VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL   93 (1015)
Q Consensus        15 n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~   93 (1015)
                      +..++.|.||||.|+..||.++|+.|++.+++ ++..|..|.||||+|+..++.  +..++......+.....+.+....
T Consensus        35 ~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~  112 (682)
T PHA02876         35 CENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNV--MDIVISLTLDCDIILDIKYASIIL  112 (682)
T ss_pred             cccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCc--cccccccccchhhcccccHHHHHH
Confidence            34467789999999999999999999998776 556788899999999988874  333333222222223333344333


Q ss_pred             HHHcCCHHHHHHHHhc-cCccccc----cccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChH
Q psy14874         94 AAMNGYADLCRFLVHD-HAAVIDI----LTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPE  168 (1015)
Q Consensus        94 A~~~g~~eiv~~Ll~~-~~~~i~~----~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~  168 (1015)
                      +......-.+..|-+. .+.++..    ......++++.|+..|+.+++++|++.|+++|.+|..|.||||+|+..|+.+
T Consensus       113 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~  192 (682)
T PHA02876        113 NKHKLDEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAK  192 (682)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence            3332222222222211 1111111    1223457899999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy14874        169 VAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGA  248 (1015)
Q Consensus       169 iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga  248 (1015)
                      ++++|++.+++ .+..+.+|.||+|+|+..|+.++++.|++.+...       ..+.++++.|+..++.+++++|++.|+
T Consensus       193 iv~~LL~~Gad-~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~-------~~~~~~L~~ai~~~~~~~~~~Ll~~g~  264 (682)
T PHA02876        193 MVNLLLSYGAD-VNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNI-------NKNDLSLLKAIRNEDLETSLLLYDAGF  264 (682)
T ss_pred             HHHHHHHCCCC-cCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC-------CCCcHHHHHHHHcCCHHHHHHHHHCCC
Confidence            99999999887 5777889999999999999999999999865432       234589999999999999999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHcCCH-HHHHHHHhCCCccccccccCCCHHHHHHHcC-CHHHHHHHHhcCCCCCCCCCCCCCc
Q psy14874        249 SCTDENKTGFTAVHLAAQNGHN-QVLEEMRSSKALNVYSKKLGVTALHVAAYFG-QADTVRELLSHVPGTVKSDPPTGAS  326 (1015)
Q Consensus       249 ~~~~~~~~~~t~L~~A~~~~~~-~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~-~~~~v~~Ll~~~~~~~~~~~~~~~~  326 (1015)
                      +++..+..|.||||+|+..++. ++++.|++.+++....+..|.||||.|+..| ..+.++.|+..+....         
T Consensus       265 ~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin---------  335 (682)
T PHA02876        265 SVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVN---------  335 (682)
T ss_pred             CCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCC---------
Confidence            9999999999999999999986 6899999999988888889999999999998 5889999998765542         


Q ss_pred             cccccCCCCCCCHHHHHHhcC-CHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCC
Q psy14874        327 FLGELGSESGMTPLHLAAYSG-NENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNG  405 (1015)
Q Consensus       327 ~~~~~~~~~~~t~L~~A~~~g-~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g  405 (1015)
                          ..+..|.||||+|+..+ +.++++.|++ .|++++.. +..|.||||+|+..|+.+++++|+++|++ ++..+..|
T Consensus       336 ----~~d~~g~TpLh~A~~~~~~~~iv~lLl~-~gadin~~-d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad-~~~~~~~g  408 (682)
T PHA02876        336 ----AADRLYITPLHQASTLDRNKDIVITLLE-LGANVNAR-DYCDKTPIHYAAVRNNVVIINTLLDYGAD-IEALSQKI  408 (682)
T ss_pred             ----CcccCCCcHHHHHHHhCCcHHHHHHHHH-cCCCCccC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC-ccccCCCC
Confidence                23567889999998864 6777887775 58888864 56789999999999999999999999988 57778889


Q ss_pred             CcHHHHHHHcCC-HHHHHHHhhCCCCcccCCCCCCCHHHHHHHhC-CHHHHHHHHhcCCCCcccccccccCchHHHHHHH
Q psy14874        406 KTCLHIAATHGH-LQMVEVLLGQGAEINATDKGGARSIHTAARYG-HVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLL  483 (1015)
Q Consensus       406 ~t~L~~A~~~g~-~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll  483 (1015)
                      .||||+|+..++ ..++++|+++|+++|.+|..|.||||+|+..| +.+++++|+++|++++..                
T Consensus       409 ~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~----------------  472 (682)
T PHA02876        409 GTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAI----------------  472 (682)
T ss_pred             CchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCC----------------
Confidence            999999987665 56789999999999999999999999999876 689999999999988755                


Q ss_pred             HhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCc
Q psy14874        484 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN  524 (1015)
Q Consensus       484 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~  524 (1015)
                                |..|.|||+.|+..+  ++++.|+..|+++.
T Consensus       473 ----------d~~g~tpl~~a~~~~--~~v~~Ll~~~a~~~  501 (682)
T PHA02876        473 ----------NIQNQYPLLIALEYH--GIVNILLHYGAELR  501 (682)
T ss_pred             ----------CCCCCCHHHHHHHhC--CHHHHHHHCCCCCC
Confidence                      688999999999866  57999999988774

>KOG0510|consensus

Probab=100.00  E-value=5.7e-48  Score=423.01  Aligned_cols=485  Identities=26%  Similarity=0.364  Sum_probs=302.6

Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccc
Q psy14874         35 ELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVI  114 (1015)
Q Consensus        35 ~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i  114 (1015)
                      |.++++++......-.+..|.|++|.|+..+..      ++.-++....|..|+||||.|+.....+.+++|+ ..|++.
T Consensus        42 D~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Ll-s~gad~  114 (929)
T KOG0510|consen   42 DRHTLILEKNSSTPGKRAFGDTELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLL-SYGADT  114 (929)
T ss_pred             HHHHHHHHhccccchhhhhchhHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHH-hcCCCC
Confidence            455555555555555555666666666665544      3333334445556666666666666666666666 345566


Q ss_pred             cccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHH
Q psy14874        115 DILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHI  194 (1015)
Q Consensus       115 ~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~  194 (1015)
                      +..+..+.+|+|+|+..|..++++.|+++|+|+|..|..+.||||.|+..++.|..+.|++.+.+ ....+.+|..|+|.
T Consensus       115 ~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~-~~K~~~~~~~~iH~  193 (929)
T KOG0510|consen  115 PLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGAD-PCKSDIDGNFPIHE  193 (929)
T ss_pred             ChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCC-CCcccCcCCchHHH
Confidence            66666666666666666666666666666666666666666666666666666655666665554 34445555555555


Q ss_pred             HHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q psy14874        195 AAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLE  274 (1015)
Q Consensus       195 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~  274 (1015)
                      |+.+|..++.+..+....                               .+++..+|..+..+.+|||.|+..|+++.++
T Consensus       194 aa~s~s~e~mEi~l~~~g-------------------------------~~r~~~in~~~n~~~~pLhlAve~g~~e~lk  242 (929)
T KOG0510|consen  194 AARSGSKECMEIFLPEHG-------------------------------YERQTHINFDNNEKATPLHLAVEGGDIEMLK  242 (929)
T ss_pred             HHHhcchhhhhhhhcccc-------------------------------chhhcccccccCCCCcchhhhhhcCCHHHHH
Confidence            555555554444443100                               0134445555555555555555555555555


Q ss_pred             HHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHH
Q psy14874        275 EMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRL  354 (1015)
Q Consensus       275 ~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~  354 (1015)
                      .+++.+.......                                                                   
T Consensus       243 ~~L~n~~~~a~~~-------------------------------------------------------------------  255 (929)
T KOG0510|consen  243 MCLQNGKKIADVQ-------------------------------------------------------------------  255 (929)
T ss_pred             HHHhCccccchhh-------------------------------------------------------------------
Confidence            5554432110000                                                                   


Q ss_pred             HHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccC
Q psy14874        355 LLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT  434 (1015)
Q Consensus       355 Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~  434 (1015)
                                  .+              ...-.+.       .++..|.+|.||||+|++.|+++.++.|+..|++++.+
T Consensus       256 ------------~~--------------~~~q~ke-------lv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~k  302 (929)
T KOG0510|consen  256 ------------LD--------------AMQQEKE-------LVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSK  302 (929)
T ss_pred             ------------hH--------------HHHHHHH-------HhhcccccCCchHHHHHHcCChhHHHHHHHcCCccccc
Confidence                        00              0001111       14567889999999999999999999999999999999


Q ss_pred             CCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHH
Q psy14874        435 DKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE  514 (1015)
Q Consensus       435 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~  514 (1015)
                      +.++.||||.|+++|+++.++.|++ -.+..                       +++..|..|.||||+|+.+||..+++
T Consensus       303 n~d~~spLH~AA~yg~~ntv~rLL~-~~~~r-----------------------llne~D~~g~tpLHlaa~~gH~~v~q  358 (929)
T KOG0510|consen  303 NKDEESPLHFAAIYGRINTVERLLQ-ESDTR-----------------------LLNESDLHGMTPLHLAAKSGHDRVVQ  358 (929)
T ss_pred             CCCCCCchHHHHHcccHHHHHHHHh-CcCcc-----------------------ccccccccCCCchhhhhhcCHHHHHH
Confidence            9999999999999999999999999 22221                       23556889999999999999999999


Q ss_pred             HHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCH
Q psy14874        515 VLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL  594 (1015)
Q Consensus       515 ~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~  594 (1015)
                      .|++.|+.....                                                ...|.+|.||||+|+..|+.
T Consensus       359 lLl~~GA~~~~~------------------------------------------------~e~D~dg~TaLH~Aa~~g~~  390 (929)
T KOG0510|consen  359 LLLNKGALFLNM------------------------------------------------SEADSDGNTALHLAAKYGNT  390 (929)
T ss_pred             HHHhcChhhhcc------------------------------------------------cccccCCchhhhHHHHhccH
Confidence            999999876310                                                02277889999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHH-HhcCChHHHHHHHHhCCccccccchhhhhHHHHHHhcccchhhH---HHHHH
Q psy14874        595 QVCKLLLDLGASIDATDDQGQKPIHVA-AQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMA---TELLA  670 (1015)
Q Consensus       595 ~iv~~Ll~~ga~~~~~d~~g~t~l~~A-~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a---~~ll~  670 (1015)
                      .+|++|+.+|+++...+..|.|++++- .+....++     -..+..       ......+++-..++-.+.   +.+..
T Consensus       391 ~av~~Li~~Ga~I~~~n~~g~SA~~~~~~~~~p~~~-----~~~~~n-------~c~~~~~i~~~pe~~e~vlD~c~l~~  458 (929)
T KOG0510|consen  391 SAVQKLISHGADIGVKNKKGKSAFDTRPDRCLPVFV-----HRSPFN-------KCPTTELIEPLPECFEIVLDFCILKS  458 (929)
T ss_pred             HHHHHHHHcCCceeeccccccccccccccccccHHH-----hhCCCC-------CcchhhhhccchHHHHHHHHHHHHHH
Confidence            999999999999999999999998851 11111111     011110       011111111111111110   11222


Q ss_pred             HHcCCCcccccccccccCCchHHHHHHHhhhhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhccCchhhHhh
Q psy14874        671 LAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFT  747 (1015)
Q Consensus       671 ~~~~~~e~~~il~~~~~~~~~~L~~ai~~~~k~fvah~~~q~~L~~~w~~~~~~~~~~~l~~~~~~~l~~~~~i~~~  747 (1015)
                      +|+.+.     .+.......+++..++++++++.+.||.|+.+|..+|.+....+....++..+.|++..+..+...
T Consensus       459 ~e~~~~-----~~~~Q~~~~~~~~~mv~~~~~eLL~HPL~ssfL~mKW~~~g~~~~~~nL~~Y~lFlv~lT~Yv~~~  530 (929)
T KOG0510|consen  459 QERKDS-----PTPLQDEAAPILNIMVDKEQIELLEHPLSSSFLFMKWNRYGKYFHLNNLLIYSLFLVSLTIYVLLI  530 (929)
T ss_pred             hhccCC-----CChhhhhhhhHHHHHhhhhHHHHhcChhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            333222     122222335589999999999999999999999999988766666665666555555544444433

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.2e-46  Score=442.20  Aligned_cols=250  Identities=17%  Similarity=0.147  Sum_probs=193.6

Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH----HHHHH
Q psy14874         34 MELVNTMLNNHARVDVFDQEGRSALHLAAEH---GYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD----LCRFL  106 (1015)
Q Consensus        34 ~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~e----iv~~L  106 (1015)
                      ++.||.|+.+|..++..|.+|+||||+|+..   |+.++|++|++.|++++.++..|.||||.|+..|+.+    +++.|
T Consensus        12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~L   91 (661)
T PHA02917         12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMAL   91 (661)
T ss_pred             HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHH
Confidence            5788999999999998899999999998655   8899999999999999999999999999999999954    56788


Q ss_pred             HhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH--HHcCChHHHHHHhhcCCCCcccC
Q psy14874        107 VHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA--AQNNFPEVAQIFLRAHPSLVTAT  184 (1015)
Q Consensus       107 l~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A--~~~g~~~iv~~Ll~~~~~~~~~~  184 (1015)
                      ++.++. .+..+  ..++++.|+.+|+.++|++|+++|+|+|.+|..|+||||.|  +.+|+.+++++|+++|++. +..
T Consensus        92 l~~~~~-~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~v-n~~  167 (661)
T PHA02917         92 LEATGY-SNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSV-LYE  167 (661)
T ss_pred             HhccCC-CCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCc-ccc
Confidence            765442 33322  33677889999999999999999999999999999999965  3578999999999999874 322


Q ss_pred             C---CCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHH-----------cCCHHHHHHHHHcCCCC
Q psy14874        185 T---KDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAE-----------GGHANVVRVLVKAGASC  250 (1015)
Q Consensus       185 ~---~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~-----------~g~~~iv~~Ll~~ga~~  250 (1015)
                      +   ..|.+.                         .......+.||||+|+.           +++.+++++|+++|+++
T Consensus       168 d~~~~~g~~~-------------------------~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadv  222 (661)
T PHA02917        168 DEDDEYGYAY-------------------------DDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKP  222 (661)
T ss_pred             cccccccccc-------------------------ccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCc
Confidence            2   223211                         01112245588888875           46899999999999999


Q ss_pred             CCCCCCCCCHHHHHHHcCCH--HHHHHHHhCCCccc----cccccCCCHHHHHHHcC---------CHHHHHHHHhcC
Q psy14874        251 TDENKTGFTAVHLAAQNGHN--QVLEEMRSSKALNV----YSKKLGVTALHVAAYFG---------QADTVRELLSHV  313 (1015)
Q Consensus       251 ~~~~~~~~t~L~~A~~~~~~--~iv~~Ll~~~~~~~----~~~~~~~t~l~~A~~~~---------~~~~v~~Ll~~~  313 (1015)
                      +..|.+|.||||+|+.+|+.  ++++.|++ |++..    ..+..+.++++.|++.+         +.++++.|++.+
T Consensus       223 n~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~G  299 (661)
T PHA02917        223 SSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENG  299 (661)
T ss_pred             ccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCC
Confidence            99999999999999999985  79999975 54332    23344556666666421         445555555543

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.5e-45  Score=432.88  Aligned_cols=437  Identities=17%  Similarity=0.205  Sum_probs=341.9

Q ss_pred             ccCCCCCCcHHHHHHhc---CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH----HHHHHHHhCCCCCCCCCCCC
Q psy14874         15 NKQTSIGWTPLLIACNR---GHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYL----KVCDALLTHKAFINSKSRVG   87 (1015)
Q Consensus        15 n~~~~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~----~iv~~Ll~~ga~in~~~~~g   87 (1015)
                      +.+|.+|+||||+|+..   |+.++|++|+++|++++..+..|+||||+|+..|+.    ++++.|++.+...|..+  .
T Consensus        26 ~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~--~  103 (661)
T PHA02917         26 DTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIND--F  103 (661)
T ss_pred             cccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCC--c
Confidence            56699999999998666   889999999999999999999999999999999985    46688888765445443  2


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHH--HcCCHHHHHHHHHCCCCCCCCCCC---C--------
Q psy14874         88 RTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA--EAGQLQVCKLLLDLGASIDATDDQ---G--------  154 (1015)
Q Consensus        88 ~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa--~~g~~~ivk~Ll~~gad~n~~d~~---~--------  154 (1015)
                      .++++.|+.+|+.|+|++|+ ..|+++|..+..|+||||.|+  .+|+.+++++|+++||++|..|..   |        
T Consensus       104 ~~~~~~a~~~~~~e~vk~Ll-~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~  182 (661)
T PHA02917        104 NIFSYMKSKNVDVDLIKVLV-EHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQP  182 (661)
T ss_pred             chHHHHHhhcCCHHHHHHHH-HcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccc
Confidence            37788899999999999999 569999999999999999654  578999999999999999866542   3        


Q ss_pred             ---CcHHHHHHH-----------cCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCH--HHHHHHHhcCCcc-ccc
Q psy14874        155 ---QKPIHVAAQ-----------NNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSV--GVIEELMKFDRSG-VIS  217 (1015)
Q Consensus       155 ---~t~L~~A~~-----------~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~--~iv~~Ll~~~~~~-~~~  217 (1015)
                         .||||+|+.           .++.+++++|+++|.+ ++..+.+|.||||+|+.+|+.  ++++.|++ +.+. ...
T Consensus       183 ~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gad-vn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~  260 (661)
T PHA02917        183 RNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIK-PSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYS  260 (661)
T ss_pred             cccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCC-cccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccc
Confidence               599999986           4688999999999987 788899999999999999985  79999986 3322 222


Q ss_pred             ccCCCCCCcHHHHHHHc---------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCcccccc
Q psy14874        218 ARNRVTEATPLQLAAEG---------GHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSS-KALNVYSK  287 (1015)
Q Consensus       218 ~~~~~~~~t~L~~A~~~---------g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~-~~~~~~~~  287 (1015)
                      ...+..+.+++++|+.-         .+.++++.|++.|++      .+.+++++++..+..+++.+++.. +...    
T Consensus       261 ~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  330 (661)
T PHA02917        261 YIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP------HGIMCSIVPLWRNDKETISLILKTMNSDV----  330 (661)
T ss_pred             cccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC------CceeEeeecccccchHHHHHHHHHhchHH----
Confidence            23445677888888841         277999999999985      356788888889999999988853 2211    


Q ss_pred             ccCCCHHHHHHHcCC--HHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCccc
Q psy14874        288 KLGVTALHVAAYFGQ--ADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDA  365 (1015)
Q Consensus       288 ~~~~t~l~~A~~~~~--~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~  365 (1015)
                        -..++..++..|.  .++++.|++.+++...             .+..|.++.    ...+.++++.|+...|.+++.
T Consensus       331 --~~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~-------------~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~  391 (661)
T PHA02917        331 --LQHILIEYMTFGDIDIPLVECMLEYGAVVNK-------------EAIHGYFRN----INIDSYTMKYLLKKEGGDAVN  391 (661)
T ss_pred             --HHHHHHHHHHcCCCcHHHHHHHHHcCCCCCC-------------CCccccchh----hcCCHHHHHHHHHhcCCCccc
Confidence              0022333444665  4588999988776643             223455532    356778888888766777665


Q ss_pred             ccccCCccHHHHHHhCCC--HHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHH
Q psy14874        366 QTQENGYNPLHLACFGGH--VTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIH  443 (1015)
Q Consensus       366 ~~~~~g~tpL~~A~~~g~--~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~  443 (1015)
                      ..+ +|.||||.|++++.  .+...+..           ..|.+..  +...+..++++.|+++|+++|.+|..|.||||
T Consensus       392 ~~~-~G~TpL~~a~~~~~~~~~~~~~~~-----------~~~~~~~--~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh  457 (661)
T PHA02917        392 HLD-DGEIPIGHLCKSNYGCYNFYTYTY-----------KKGLCDM--SYACPILSTINICLPYLKDINMIDKRGETLLH  457 (661)
T ss_pred             cCC-CCCChhHHHHHhcccchhhhhhhh-----------hhccchh--hhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHH
Confidence            543 58899988887654  33322211           2222222  22334789999999999999999999999999


Q ss_pred             HHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHH-cCCHHHHHHHHhcCCC
Q psy14874        444 TAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT-HGHLQMVEVLLGQGAE  522 (1015)
Q Consensus       444 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~ga~  522 (1015)
                      +|+..++.+++++|+++|++++..                          +..|.||||+|+. .++.+++++|+++|++
T Consensus       458 ~Aa~~~~~~~v~~Ll~~GAdin~~--------------------------d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~  511 (661)
T PHA02917        458 KAVRYNKQSLVSLLLESGSDVNIR--------------------------SNNGYTCIAIAINESRNIELLKMLLCHKPT  511 (661)
T ss_pred             HHHHcCCHHHHHHHHHCcCCCCCC--------------------------CCCCCCHHHHHHHhCCCHHHHHHHHHcCCC
Confidence            999999999999999999998865                          7889999999996 7899999999999999


Q ss_pred             Ccc
Q psy14874        523 INA  525 (1015)
Q Consensus       523 ~~~  525 (1015)
                      ++.
T Consensus       512 i~~  514 (661)
T PHA02917        512 LDC  514 (661)
T ss_pred             hhH
Confidence            864

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.1e-43  Score=398.36  Aligned_cols=432  Identities=15%  Similarity=0.176  Sum_probs=278.5

Q ss_pred             HHHHHHHhCCCCCC-CCCCCCCcHHHHHHHcC---CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHh
Q psy14874         35 ELVNTMLNNHARVD-VFDQEGRSALHLAAEHG---YLKVCDALLTHKAFINSKSRVGRTALHLAAMNG--YADLCRFLVH  108 (1015)
Q Consensus        35 ~iv~~Ll~~g~~~~-~~d~~g~t~L~~A~~~g---~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g--~~eiv~~Ll~  108 (1015)
                      ..+++.++..+++| ..|.+|+||||+|+..|   +.++|++|+++||+++.+|..|.||||+|+..+  +.|+|++|++
T Consensus        21 ~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~  100 (672)
T PHA02730         21 KKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLIS  100 (672)
T ss_pred             HHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHh
Confidence            44555555555555 45555666666666554   356666666666666666666666666665544  4666666664


Q ss_pred             cc-CccccccccCCCCHHHHHHH--cCCHHHHHHHHH-CCCCCCCCCC-----CCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874        109 DH-AAVIDILTLRKQTPLHLAAE--AGQLQVCKLLLD-LGASIDATDD-----QGQKPIHVAAQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       109 ~~-~~~i~~~~~~g~t~L~~Aa~--~g~~~ivk~Ll~-~gad~n~~d~-----~~~t~L~~A~~~g~~~iv~~Ll~~~~~  179 (1015)
                      .+ +++++..+..+.+||+.++.  +++.+++++|++ .|++++...+     .|.+|++++...++.++|++|+++|++
T Consensus       101 ~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~  180 (672)
T PHA02730        101 SYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECY  180 (672)
T ss_pred             cCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCc
Confidence            32 22334444445566665555  556666666664 4455554422     455666666666666666666665554


Q ss_pred             Cc------c-cCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy14874        180 LV------T-ATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD  252 (1015)
Q Consensus       180 ~~------~-~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~  252 (1015)
                      .-      . ..+.-+.+.||++....                              .+..+++.+++++|+++|+++|.
T Consensus       181 v~g~~~~~~~~~~~~c~~~l~~~il~~------------------------------~~~~~n~~eiv~lLIs~GadIN~  230 (672)
T PHA02730        181 STGYVFRSCMYDSDRCKNSLHYYILSH------------------------------RESESLSKDVIKCLIDNNVSIHG  230 (672)
T ss_pred             ccccccccccccCCccchhHHHHHHhh------------------------------hhhhccCHHHHHHHHHCCCCCCC
Confidence            21      0 01111223333332111                              11345788999999999999999


Q ss_pred             CCCCCCCHHHH--HHHcCCHHHHHHHHhCCCccccccc----cCCCHHHH----HH----HcCCHHHHHHHHhcCCCCCC
Q psy14874        253 ENKTGFTAVHL--AAQNGHNQVLEEMRSSKALNVYSKK----LGVTALHV----AA----YFGQADTVRELLSHVPGTVK  318 (1015)
Q Consensus       253 ~~~~~~t~L~~--A~~~~~~~iv~~Ll~~~~~~~~~~~----~~~t~l~~----A~----~~~~~~~v~~Ll~~~~~~~~  318 (1015)
                      +|.+|.||||+  +...++.+++++|++.......-+.    .-+..++-    --    ..-+.++|..|++.+.....
T Consensus       231 kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~  310 (672)
T PHA02730        231 RDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLID  310 (672)
T ss_pred             CCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchh
Confidence            99999999985  5556779999999984332211110    00111110    01    11235678888876544211


Q ss_pred             CC------CCCCCc------cccccC---CCCCCCHHHHHHhcC---CHHHHHHHHhhcCCCcccccccCCccHHHHHHh
Q psy14874        319 SD------PPTGAS------FLGELG---SESGMTPLHLAAYSG---NENVVRLLLNSAGVQVDAQTQENGYNPLHLACF  380 (1015)
Q Consensus       319 ~~------~~~~~~------~~~~~~---~~~~~t~L~~A~~~g---~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~  380 (1015)
                      ..      ...+..      ++...+   ...-+..|+.-.+.+   +.+++++|++ .|++++..  ..|.||||+|+.
T Consensus       311 ~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs-~GAdIN~k--~~G~TpLH~Aa~  387 (672)
T PHA02730        311 VMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLD-NGATMDKT--TDNNYPLHDYFV  387 (672)
T ss_pred             hhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHH-CCCCCCcC--CCCCcHHHHHHH
Confidence            10      000000      000000   011122566666655   6899999997 59999974  689999999988


Q ss_pred             CCC----HHHHHHHHHhcch-hhcccCCCCCcHHHH---HHHcC---------CHHHHHHHhhCCCCcccCCCCCCCHHH
Q psy14874        381 GGH----VTVVGLLLSRAAD-LLQSADKNGKTCLHI---AATHG---------HLQMVEVLLGQGAEINATDKGGARSIH  443 (1015)
Q Consensus       381 ~g~----~~iv~~Ll~~~~~-~~~~~d~~g~t~L~~---A~~~g---------~~~iv~~Ll~~ga~i~~~~~~g~t~L~  443 (1015)
                      .++    .+++++|+++|++ .++.+|..|.||||.   |...+         ..+++++|+++|+++|.+|..|.||||
T Consensus       388 ~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh  467 (672)
T PHA02730        388 NNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLY  467 (672)
T ss_pred             HcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHH
Confidence            774    8999999999984 467889999999984   33232         236799999999999999999999999


Q ss_pred             HHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCC-CCCcHHHHHHHc--CCHHHHHHHHhcC
Q psy14874        444 TAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADK-NGKTCLHIAATH--GHLQMVEVLLGQG  520 (1015)
Q Consensus       444 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~-~g~t~L~~A~~~--g~~~~v~~Ll~~g  520 (1015)
                      +|+..++.+++++|+++|++++..                          +. .|.||||.|+..  ++.++++.|+++|
T Consensus       468 ~Aa~~~~~eive~LI~~GAdIN~~--------------------------d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~g  521 (672)
T PHA02730        468 YAVDVNNIQFARRLLEYGASVNTT--------------------------SRSIINTAIQKSSYRRENKTKLVDLLLSYH  521 (672)
T ss_pred             HHHHhCCHHHHHHHHHCCCCCCCC--------------------------CCcCCcCHHHHHHHhhcCcHHHHHHHHHcC
Confidence            999999999999999999998865                          44 589999999984  7999999999999


Q ss_pred             CCCcc
Q psy14874        521 AEINA  525 (1015)
Q Consensus       521 a~~~~  525 (1015)
                      ++++.
T Consensus       522 a~i~~  526 (672)
T PHA02730        522 PTLET  526 (672)
T ss_pred             CCHHH
Confidence            98854

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=1.5e-42  Score=393.84  Aligned_cols=361  Identities=17%  Similarity=0.229  Sum_probs=250.3

Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy14874         24 PLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAA--EHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD  101 (1015)
Q Consensus        24 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~--~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~e  101 (1015)
                      ++..++..|+.+.++.+++...     ...+.++||.++  ..++.++|++|+++|+++|.++..|.||||+|+..|+.+
T Consensus        12 sl~~~~~~~n~~~~~~~l~~~~-----~~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~e   86 (446)
T PHA02946         12 SLYAKYNSKNLDVFRNMLQAIE-----PSGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNR   86 (446)
T ss_pred             HHHHHHccCcHHHHHHHHhccC-----CCCCChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHH
Confidence            4677777788888888877421     122357777765  334667888888888888888888888888888888888


Q ss_pred             HHHHHHhccCccccccccCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCChHHHHHHhhcCC
Q psy14874        102 LCRFLVHDHAAVIDILTLRKQTPLHLAAEAG--QLQVCKLLLDLGASIDA-TDDQGQKPIHVAAQNNFPEVAQIFLRAHP  178 (1015)
Q Consensus       102 iv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g--~~~ivk~Ll~~gad~n~-~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~  178 (1015)
                      +|++|++ ++++++.+|..|.||||+|+..+  ..+++++|+++|++++. .|..|.|||| |+..|+.+++++|++.+.
T Consensus        87 iv~lLL~-~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~ga  164 (446)
T PHA02946         87 IVAMLLT-HGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGF  164 (446)
T ss_pred             HHHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccc
Confidence            8888884 56777878888888888877655  36778888888888774 5777788886 555677778888877766


Q ss_pred             CCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q psy14874        179 SLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGF  258 (1015)
Q Consensus       179 ~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~  258 (1015)
                      + .+..+..|.||||.|+..++                                  ++.+++++|+++|++++..|.+|.
T Consensus       165 d-~~~~d~~G~t~Lh~A~~~~~----------------------------------~~~~~v~~Ll~~Gadin~~d~~G~  209 (446)
T PHA02946        165 E-ARIVDKFGKNHIHRHLMSDN----------------------------------PKASTISWMMKLGISPSKPDHDGN  209 (446)
T ss_pred             c-ccccCCCCCCHHHHHHHhcC----------------------------------CCHHHHHHHHHcCCCCcccCCCCC
Confidence            5 45566666666666554322                                  223455555555555555555555


Q ss_pred             CHHHHHHHcC--CHHHHHHHHhCCCccccccccCCCHHHHHHHcCC-HHHHHHHHhcCCCCCCCCCCCCCccccccCCCC
Q psy14874        259 TAVHLAAQNG--HNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQ-ADTVRELLSHVPGTVKSDPPTGASFLGELGSES  335 (1015)
Q Consensus       259 t~L~~A~~~~--~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~  335 (1015)
                      ||||+|+.++  +.+++++|+. +++....+..|.||||.|+..++ .++++.|++++...                  .
T Consensus       210 TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~------------------~  270 (446)
T PHA02946        210 TPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVI------------------T  270 (446)
T ss_pred             CHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCC------------------C
Confidence            5555555543  4555555553 44444555555555555555555 35555555543111                  1


Q ss_pred             CCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHc
Q psy14874        336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH  415 (1015)
Q Consensus       336 ~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~  415 (1015)
                      + .+++.|+..+..++++.+..+ |.       ..|.||||+|+..|+.+++++|++++.        .|.||||+|+..
T Consensus       271 ~-~~~~~a~~~~~~~~~e~l~~~-g~-------~~~~TpLh~Aa~~g~~eivk~Ll~~~~--------~~~t~L~~A~~~  333 (446)
T PHA02946        271 D-QTVNICIFYDRDDVLEIINDK-GK-------QYDSTDFKMAVEVGSIRCVKYLLDNDI--------ICEDAMYYAVLS  333 (446)
T ss_pred             C-cHHHHHHHcCchHHHHHHHHc-Cc-------ccCCCHHHHHHHcCCHHHHHHHHHCCC--------ccccHHHHHHHh
Confidence            1 236777777777777777653 21       236788888888888889988888754        367999999999


Q ss_pred             CCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCC
Q psy14874        416 GHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK  463 (1015)
Q Consensus       416 g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~  463 (1015)
                      ++.+++++|+.+|+++|.. ..|.||+|+|++.++.++++.|+.+..+
T Consensus       334 ~~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~~~~~~~ll~~~~~  380 (446)
T PHA02946        334 EYETMVDYLLFNHFSVDSV-VNGHTCMSECVRLNNPVILSKLMLHNPT  380 (446)
T ss_pred             CHHHHHHHHHHCCCCCCCc-cccccHHHHHHHcCCHHHHHHHHhcCcc
Confidence            9999999999999999985 5799999999999999999999986543

>KOG3609|consensus

Probab=100.00  E-value=2.5e-45  Score=408.49  Aligned_cols=291  Identities=20%  Similarity=0.172  Sum_probs=247.8

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhcCC---ccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy14874        547 GRTALHLAAMNGYADLCRFLVHDHA---AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQ  623 (1015)
Q Consensus       547 g~t~L~~A~~~g~~~~v~~Ll~~~~---~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~  623 (1015)
                      +..-...|+.+|+.-.|+..++...   ..+|+.|.-|+++|++|+.+.|.+++++|++.+...  .|     +|.+|+.
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--gd-----ALL~aI~   97 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--GD-----ALLLAIA   97 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--ch-----HHHHHHH
Confidence            4446778999999999999987644   467999999999999999999999999999987766  33     9999999


Q ss_pred             cCChHHHHHHHHhCCccccccchhhhhHHHHHHhcccchhhHHHHHHHHcCCCcccccccccccCCchHHHHHHHhhhhH
Q psy14874        624 NNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKE  703 (1015)
Q Consensus       624 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~ll~~~~~~~e~~~il~~~~~~~~~~L~~ai~~~~k~  703 (1015)
                      .+..+.|+.++.+.........          ....          .....+....+++.+++.+++++|+++++.|+  
T Consensus        98 ~~~v~~VE~ll~~~~~~~~~~~----------~~d~----------~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~--  155 (822)
T KOG3609|consen   98 VGSVPLVELLLVHFVDAPYLER----------SGDA----------NSPHFTPDITPLMLAAHLNNFEILQCLLTRGH--  155 (822)
T ss_pred             HHHHHHHHHHHhcccccchhcc----------cccc----------CcccCCCCccHHHHHHHhcchHHHHHHHHcCC--
Confidence            9999999999987543211100          0000          11223445778888899999999999888872  


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhccCchhhHhhhccCCccCCchhHHHHHhhhcHHHHHHHHHHhhccc
Q psy14874        704 VIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNKVPIIKFMSYLTSHMYLMFLLMLVGITP  783 (1015)
Q Consensus       704 fvah~~~q~~L~~~w~~~~~~~~~~~l~~~~~~~l~~~~~i~~~~~~~~~~~~~P~~~f~~~~~s~~~fl~L~~~~~~~~  783 (1015)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (822)
T KOG3609|consen  156 --------------------------------------------------------------------------------  155 (822)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcccccCCCCcchHHHHHHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhhhhhcCCccccccc-chh
Q psy14874        784 IYPVVRPNLVPYWYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEGKITTHLLP-FQF  862 (1015)
Q Consensus       784 ~~~~~~~~~~p~~~e~~~~~~v~gl~~~e~~~~~~~~~~~~~~~~wn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  862 (1015)
                                                                                           ...+.++ +-.
T Consensus       156 ---------------------------------------------------------------------~i~~PH~~~C~  166 (822)
T KOG3609|consen  156 ---------------------------------------------------------------------CIPIPHDIRCE  166 (822)
T ss_pred             ---------------------------------------------------------------------CCCCCcccccC
Confidence                                                                                 1111232 466


Q ss_pred             hhhhhhhcccCCCCcchhhh------------ccCCchhhhHHHHHHHHHHHhhHhHHhHHhHHHHHhhhhHHHHHHHHH
Q psy14874        863 VYNLMVCSKNHNNKPMEEFV------------LMSPAPVDTAAKLSSIYITLATKEKERAKDLIAAGKHCEGMATELLAL  930 (1015)
Q Consensus       863 ~~~~~v~~~~~~~~~~~~~~------------l~~~~p~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  930 (1015)
                      |-+.|+|++..++.|+.++.            |+|||||.|||+||++|++||.+|+||++||.+++.|||.|||+|||+
T Consensus       167 C~~C~~~~~~dslhS~srin~yraLaSpa~i~LsS~DPiltAf~LS~eL~~La~~E~Efk~dY~~Ls~qcq~F~v~LLdq  246 (822)
T KOG3609|consen  167 CKTCKRETVTDSLHSLSRVNIYRALASPALIWLSSDDPILTAFALSWDLQQLASDELEFKEDYRDLSMQCQRFAVDLLDQ  246 (822)
T ss_pred             chHhhhccccCCcchHHHHHHHHHhhcHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            77999999999888888886            999999999999999999999999999999999999999999999999


Q ss_pred             hccccchhhhhccccc-------CCchhhHHHhhccccceehhhhHHHHHHHHhhccc--chhhHHHHHHHHHHHhhhhH
Q psy14874        931 AAGADSAGRILTATDR-------RNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSL--NWAAWKTMLLFLTFILCPPV 1001 (1015)
Q Consensus       931 ~~~~~~~~~~l~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~q~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 1001 (1015)
                      ||+++|++.|||+.|+       +++|||++||+||||||||||+|||+|+++||+++  +|..-|.+..++..+.||++
T Consensus       247 ~r~s~Ele~iLn~~~~~~~~~~~~sl~RLklAIkyeqK~FVahpNcQq~L~siWy~g~R~~~~~~K~~~~~~~~~~~P~~  326 (822)
T KOG3609|consen  247 ARTSDELEMILNNRNNCPERMTRISLPRLKLAIKYEQKEFVAHPNCQQLLKSVWYSGWRRKGIKPKFDAWRFLRLCFPMP  326 (822)
T ss_pred             hcchHHHHHHHcCCCCCcccccccccHHHHHHHHHhhhheecCccHHHHHHHHHhhhhhhcchHHHHHHHHHHHHHhHHH
Confidence            9999999999999988       89999999999999999999999999999999944  78999999999999999999


Q ss_pred             HHHHHhcCCCCCCC
Q psy14874       1002 WICFTLSLGHKYNK 1015 (1015)
Q Consensus      1002 ~~~~~~~~~~~~~~ 1015 (1015)
                      |++|++|+++|.|+
T Consensus       327 ~l~yllap~S~~G~  340 (822)
T KOG3609|consen  327 SLVYLLAPMSRKGT  340 (822)
T ss_pred             HHHHHhCCCCcccc
Confidence            99999999999985

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=1.3e-42  Score=394.36  Aligned_cols=346  Identities=18%  Similarity=0.246  Sum_probs=276.1

Q ss_pred             hHhhHhhccCCCCC-CcHHHHHHh--cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q psy14874          8 TEISKALNKQTSIG-WTPLLIACN--RGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS   84 (1015)
Q Consensus         8 ~~~~~~~n~~~~~g-~t~L~~A~~--~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~   84 (1015)
                      +..+..++.....| .++||.++.  .++.++|++|+++|+++|..|.+|+||||+|++.|+.++|++|+++|+++|.+|
T Consensus        23 ~~~~~~l~~~~~~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d  102 (446)
T PHA02946         23 DVFRNMLQAIEPSGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACD  102 (446)
T ss_pred             HHHHHHHhccCCCCCChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCC
Confidence            44555666666555 699998774  457899999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHcCC--HHHHHHHHhccCccccc-cccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy14874         85 RVGRTALHLAAMNGY--ADLCRFLVHDHAAVIDI-LTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA  161 (1015)
Q Consensus        85 ~~g~t~L~~A~~~g~--~eiv~~Ll~~~~~~i~~-~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A  161 (1015)
                      ..|.||||+|+..++  .+++++|+ .++++++. .+..|.|||| |+..|+.+++++|++.|++++.+|..|+||||+|
T Consensus       103 ~~g~TpLh~A~~~~~~~~e~v~lLl-~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A  180 (446)
T PHA02946        103 KQHKTPLYYLSGTDDEVIERINLLV-QYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRH  180 (446)
T ss_pred             CCCCCHHHHHHHcCCchHHHHHHHH-HcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHH
Confidence            999999999998764  89999999 46788884 6889999997 7778999999999999999999999999999999


Q ss_pred             HHcCC--hHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHH
Q psy14874        162 AQNNF--PEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANV  239 (1015)
Q Consensus       162 ~~~g~--~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~i  239 (1015)
                      +..++  .+++++|++.+.+ ++.+|.+|.||||+|+..|.                                  ++.++
T Consensus       181 ~~~~~~~~~~v~~Ll~~Gad-in~~d~~G~TpLH~Aa~~~~----------------------------------~~~~i  225 (446)
T PHA02946        181 LMSDNPKASTISWMMKLGIS-PSKPDHDGNTPLHIVCSKTV----------------------------------KNVDI  225 (446)
T ss_pred             HHhcCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCC----------------------------------CcHHH
Confidence            87655  5899999998876 45666666666666665431                                  24566


Q ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCC
Q psy14874        240 VRVLVKAGASCTDENKTGFTAVHLAAQNGH-NQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVK  318 (1015)
Q Consensus       240 v~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~-~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~  318 (1015)
                      +++|++ |++++.+|..|.||||+|+..++ .++++.|++.++...     +. .++.++..+..++++.+..++.    
T Consensus       226 v~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~-----~~-~~~~a~~~~~~~~~e~l~~~g~----  294 (446)
T PHA02946        226 INLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVIT-----DQ-TVNICIFYDRDDVLEIINDKGK----  294 (446)
T ss_pred             HHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCC-----Cc-HHHHHHHcCchHHHHHHHHcCc----
Confidence            666663 67777777777777777777766 367777777664322     22 3677777777777777766531    


Q ss_pred             CCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhh
Q psy14874        319 SDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLL  398 (1015)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~  398 (1015)
                                     ..|.||||+|+..|+.+++++|++. |        ..|.||||+|+..++.+++++|+.+|+++ 
T Consensus       295 ---------------~~~~TpLh~Aa~~g~~eivk~Ll~~-~--------~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~-  349 (446)
T PHA02946        295 ---------------QYDSTDFKMAVEVGSIRCVKYLLDN-D--------IICEDAMYYAVLSEYETMVDYLLFNHFSV-  349 (446)
T ss_pred             ---------------ccCCCHHHHHHHcCCHHHHHHHHHC-C--------CccccHHHHHHHhCHHHHHHHHHHCCCCC-
Confidence                           2367889999999999999988864 3        24678999999999999999999988884 


Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHhhC
Q psy14874        399 QSADKNGKTCLHIAATHGHLQMVEVLLGQ  427 (1015)
Q Consensus       399 ~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~  427 (1015)
                      +.. ..|.||||+|++.++.++++.|+.+
T Consensus       350 n~~-~~G~t~l~~a~~~~~~~~~~~ll~~  377 (446)
T PHA02946        350 DSV-VNGHTCMSECVRLNNPVILSKLMLH  377 (446)
T ss_pred             CCc-cccccHHHHHHHcCCHHHHHHHHhc
Confidence            443 5789999999999999999999885

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=7e-42  Score=388.37  Aligned_cols=416  Identities=16%  Similarity=0.167  Sum_probs=313.1

Q ss_pred             hc-cCCCCCCcHHHHHHhcC---CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHhCCC--CCCCCCC
Q psy14874         14 LN-KQTSIGWTPLLIACNRG---HMELVNTMLNNHARVDVFDQEGRSALHLAAEHG--YLKVCDALLTHKA--FINSKSR   85 (1015)
Q Consensus        14 ~n-~~~~~g~t~L~~A~~~g---~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g--~~~iv~~Ll~~ga--~in~~~~   85 (1015)
                      +| .+|..|+||||+|+..|   +.++|++|+++|++++.+|..|+||||+|+..|  +.++|++|++.|+  +++..+.
T Consensus        33 in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~  112 (672)
T PHA02730         33 LSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSN  112 (672)
T ss_pred             hhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccc
Confidence            55 88999999999999997   599999999999999999999999999999977  7999999999966  4577787


Q ss_pred             CCCcHHHHHHH--cCCHHHHHHHHhccCcccccccc-----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-------CC
Q psy14874         86 VGRTALHLAAM--NGYADLCRFLVHDHAAVIDILTL-----RKQTPLHLAAEAGQLQVCKLLLDLGASIDA-------TD  151 (1015)
Q Consensus        86 ~g~t~L~~A~~--~g~~eiv~~Ll~~~~~~i~~~~~-----~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~-------~d  151 (1015)
                      .+.+||+.++.  +++.|+|++|+..++.+++....     .|.+|+++|...++.++||+|+++||+++-       .+
T Consensus       113 ~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~  192 (672)
T PHA02730        113 INDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYD  192 (672)
T ss_pred             cCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccccccccccccc
Confidence            79999999998  89999999999767777666533     789999999999999999999999999951       33


Q ss_pred             CCCC-cHHHHH------HHcCChHHHHHHhhcCCCCcccCCCCCchHHHH--HHHcCCHHHHHHHHhcCCcccccccCCC
Q psy14874        152 DQGQ-KPIHVA------AQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHI--AAMQGSVGVIEELMKFDRSGVISARNRV  222 (1015)
Q Consensus       152 ~~~~-t~L~~A------~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~--A~~~g~~~iv~~Ll~~~~~~~~~~~~~~  222 (1015)
                      .... |.||++      ..+++.|++++|+++|++ ++.+|.+|.||||+  ++..|+.|+++.|++.....  ....+.
T Consensus       193 ~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~Gad-IN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~--~~~~~~  269 (672)
T PHA02730        193 SDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVS-IHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTC--SVYDDI  269 (672)
T ss_pred             CCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccc--cccccc
Confidence            3444 445533      356788999999999987 78999999999995  55667899999999822211  111110


Q ss_pred             CC---CcHHHHH----HH----cCCHHHHHHHHHcCCCC-------CCCCCCCCC-----HHHHHHHcCCHHHHHHHHhC
Q psy14874        223 TE---ATPLQLA----AE----GGHANVVRVLVKAGASC-------TDENKTGFT-----AVHLAAQNGHNQVLEEMRSS  279 (1015)
Q Consensus       223 ~~---~t~L~~A----~~----~g~~~iv~~Ll~~ga~~-------~~~~~~~~t-----~L~~A~~~~~~~iv~~Ll~~  279 (1015)
                      .+   +..++--    -+    .-+.++|+.|++.+-..       ...+..|.+     -+..-.+..+..+++.    
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~----  345 (672)
T PHA02730        270 SQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQA----  345 (672)
T ss_pred             cchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHH----
Confidence            00   0011100    01    12346778888754331       112222221     0101111112222222    


Q ss_pred             CCccccccccCCCHHHHHHHcC---CHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCC----HHHH
Q psy14874        280 KALNVYSKKLGVTALHVAAYFG---QADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGN----ENVV  352 (1015)
Q Consensus       280 ~~~~~~~~~~~~t~l~~A~~~~---~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~----~~~v  352 (1015)
                                   .|+.-...+   +.++++.|++++++...              ...|.||||+|+..++    .+++
T Consensus       346 -------------~l~~Y~~~~~~v~ieIvelLIs~GAdIN~--------------k~~G~TpLH~Aa~~nnn~i~~eIv  398 (672)
T PHA02730        346 -------------MLINYLHYGDMVSIPILRCMLDNGATMDK--------------TTDNNYPLHDYFVNNNNIVDVNVV  398 (672)
T ss_pred             -------------HHHHHHhcCCcCcHHHHHHHHHCCCCCCc--------------CCCCCcHHHHHHHHcCCcchHHHH
Confidence                         344444433   58999999999876542              1368899999988875    8999


Q ss_pred             HHHHhhcCC--CcccccccCCccHHHH---HHhCC---------CHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCH
Q psy14874        353 RLLLNSAGV--QVDAQTQENGYNPLHL---ACFGG---------HVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL  418 (1015)
Q Consensus       353 ~~Ll~~~g~--~~~~~~~~~g~tpL~~---A~~~g---------~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~  418 (1015)
                      ++|++. |+  +++.. +..|.||||.   |...+         ..+++++|+++|++ ++.+|..|.||||+|+..++.
T Consensus       399 elLIs~-Ga~~dIN~k-d~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GAD-INakD~~G~TPLh~Aa~~~~~  475 (672)
T PHA02730        399 RFIVEN-NGHMAINHV-SNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDD-IDMIDNENKTLLYYAVDVNNI  475 (672)
T ss_pred             HHHHHc-CCCcccccc-ccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccc-hhccCCCCCCHHHHHHHhCCH
Confidence            999975 54  56654 4579999984   33232         24679999999999 689999999999999999999


Q ss_pred             HHHHHHhhCCCCcccCCC-CCCCHHHHHHHh--CCHHHHHHHHhcCCCCcc
Q psy14874        419 QMVEVLLGQGAEINATDK-GGARSIHTAARY--GHVGIINTLLQKGEKVDV  466 (1015)
Q Consensus       419 ~iv~~Ll~~ga~i~~~~~-~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~  466 (1015)
                      +++++|+++|+++|..+. .|.||+|.|+..  ++.++++.|+++|++++.
T Consensus       476 eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~~  526 (672)
T PHA02730        476 QFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLET  526 (672)
T ss_pred             HHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHHH
Confidence            999999999999999997 599999999874  789999999999987653

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=4.2e-41  Score=390.16  Aligned_cols=416  Identities=16%  Similarity=0.161  Sum_probs=261.0

Q ss_pred             ccCCCCCCcHHHHH-----HhcCCHHHHHHHHhCC-CCCCCC-CCCCCcHHHHHHH--cCCHHHHHHHHhCCCCCCCCCC
Q psy14874         15 NKQTSIGWTPLLIA-----CNRGHMELVNTMLNNH-ARVDVF-DQEGRSALHLAAE--HGYLKVCDALLTHKAFINSKSR   85 (1015)
Q Consensus        15 n~~~~~g~t~L~~A-----~~~g~~~iv~~Ll~~g-~~~~~~-d~~g~t~L~~A~~--~g~~~iv~~Ll~~ga~in~~~~   85 (1015)
                      +..+..+..+++..     .+.++.++|++|+++| +++|.. |..|.||||.|+.  .++.+++++|+++|+++|.++.
T Consensus       131 ~~~~~~d~~~~~~y~~al~~~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~  210 (764)
T PHA02716        131 DIPNNGDMDILYTYFNSPNTRGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNN  210 (764)
T ss_pred             cCCCcccchHHHHHHhhhcccCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCC
Confidence            33333344444443     3446677777777777 777766 6677777777653  3466777777777777777777


Q ss_pred             CCCcHHHHHHHcCC--HHHHHHHHhccCccccccccCCCCHHHHHH---HcCCHHHHHHHHHCCCCCCCCCCCCCcHHH-
Q psy14874         86 VGRTALHLAAMNGY--ADLCRFLVHDHAAVIDILTLRKQTPLHLAA---EAGQLQVCKLLLDLGASIDATDDQGQKPIH-  159 (1015)
Q Consensus        86 ~g~t~L~~A~~~g~--~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa---~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~-  159 (1015)
                      .|.||||+|+..|+  .++|++|+ +.|+++|.++..|+||||.|+   .+++.++++.|++.+..-...  ....+++ 
T Consensus       211 ~G~TPLH~Aa~~g~~~~eIVklLL-e~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~--~~~~~L~~  287 (764)
T PHA02716        211 HLITPLHTYLITGNVCASVIKKII-ELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVK--NIPMILHS  287 (764)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccc--cchhhhHH
Confidence            77777777777774  36777777 356677777777777777664   356677777777654322111  1112233 


Q ss_pred             --HHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHH--cCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHH--
Q psy14874        160 --VAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAM--QGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAE--  233 (1015)
Q Consensus       160 --~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~--~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~--  233 (1015)
                        .|++.|+.+++++|++++++ ++.++.+|.||||+|+.  .++.+++++|++.+.+.   ...+..|.||||.|+.  
T Consensus       288 ~i~AA~~g~leiVklLLe~GAd-IN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADI---N~kD~~G~TPLH~A~~~l  363 (764)
T PHA02716        288 YITLARNIDISVVYSFLQPGVK-LHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDL---NEPDNIGNTVLHTYLSML  363 (764)
T ss_pred             HHHHHHcCCHHHHHHHHhCCCc-eeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCC---ccCCCCCCCHHHHHHHhh
Confidence              35666777777777776665 45566667777776543  34566666666655442   2233456666666543  


Q ss_pred             ------------cCCHHHHHHHHHcCCCCCCCCCCCCCHHHH----HHHcCCHHHHHHHHhCCCccccccccCCCHHHHH
Q psy14874        234 ------------GGHANVVRVLVKAGASCTDENKTGFTAVHL----AAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVA  297 (1015)
Q Consensus       234 ------------~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~----A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A  297 (1015)
                                  .++.+++++|+++|++++..|..|.||||.    |...+..+++++|++.+.......          
T Consensus       364 av~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~----------  433 (764)
T PHA02716        364 SVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKH----------  433 (764)
T ss_pred             hhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhh----------
Confidence                        246667777777777777777777777762    222355666666666543211110          


Q ss_pred             HHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHH
Q psy14874        298 AYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHL  377 (1015)
Q Consensus       298 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~  377 (1015)
                            +.++.++.+                    .......+|.++..++.+...++.+.....               
T Consensus       434 ------~~~q~ll~~--------------------~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~---------------  472 (764)
T PHA02716        434 ------RILQDLLIR--------------------VDDTPCIIHHIIAKYNIPTDLYTDEYEPYD---------------  472 (764)
T ss_pred             ------hhhhhhhhc--------------------cCcchhhHHHHHHhcCcchhhhhhhhhhcc---------------
Confidence                  011112211                    011122355555555554443333211110               


Q ss_pred             HHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCH-----HHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCH-
Q psy14874        378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL-----QMVEVLLGQGAEINATDKGGARSIHTAARYGHV-  451 (1015)
Q Consensus       378 A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~-----~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~-  451 (1015)
                        .....+++..++..+.. .+..|..|+||||+|+..|+.     +++++|++.|+++|.+|..|.||||+|+++|+. 
T Consensus       473 --~~~~~~v~~~~ii~~~n-vN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~  549 (764)
T PHA02716        473 --STKIHDVYHCAIIERYN-NAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLS  549 (764)
T ss_pred             --ccccchhhHHHHHhhcc-ccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCcc
Confidence              00112334444444444 567788999999999998876     556999999999999999999999999999976 


Q ss_pred             ----HHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC
Q psy14874        452 ----GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEI  523 (1015)
Q Consensus       452 ----~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~  523 (1015)
                          ++++.|+++|++++.                                +.|++|...++.+++..|..+|+.+
T Consensus       550 ~~~~eIvk~LL~~ga~~~~--------------------------------~~l~~~~~~~~~~~~~ll~~~~~~~  593 (764)
T PHA02716        550 GHQWYIVKNILDKRPNVDI--------------------------------VIIFLDKCYANGKFPSLLLSEDDII  593 (764)
T ss_pred             ccHHHHHHHHHhcCCCcch--------------------------------HHHHHHhhhhhhHHHHHHHHcchhH
Confidence                999999999987763                                3478999999999999999988766

>KOG0510|consensus

Probab=100.00  E-value=1.6e-40  Score=364.58  Aligned_cols=353  Identities=31%  Similarity=0.434  Sum_probs=309.4

Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy14874        238 NVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTV  317 (1015)
Q Consensus       238 ~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~  317 (1015)
                      |..+.+++....+...+..|.+++|.++..+..      ++........+..+.+|+|.|++....+.++.+++.+... 
T Consensus        42 D~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~-  114 (929)
T KOG0510|consen   42 DRHTLILEKNSSTPGKRAFGDTELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADT-  114 (929)
T ss_pred             HHHHHHHHhccccchhhhhchhHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCC-
Confidence            677888888888888888899999999888765      3333334456777889999999999999999999887654 


Q ss_pred             CCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchh
Q psy14874        318 KSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADL  397 (1015)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~  397 (1015)
                                  ...+..+.+|+|+|+..|+.+.++.|++ ++++++.. ++.|.||||.||..++.|..+.|++.+++ 
T Consensus       115 ------------~~~n~~~~aplh~A~~~~~~s~L~~Ll~-~~~dvnl~-de~~~TpLh~A~~~~~~E~~k~Li~~~a~-  179 (929)
T KOG0510|consen  115 ------------PLRNLNKNAPLHLAADSGNYSCLKLLLD-YGADVNLE-DENGFTPLHLAARKNKVEAKKELINKGAD-  179 (929)
T ss_pred             ------------ChhhhhccCchhhccccchHHHHHHHHH-hcCCcccc-ccCCCchhhHHHhcChHHHHHHHHhcCCC-
Confidence                        2345678899999999999999999997 47999864 57899999999999999988999999999 


Q ss_pred             hcccCCCCCcHHHHHHHcCCHHHHHHHhh-----CCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccc
Q psy14874        398 LQSADKNGKTCLHIAATHGHLQMVEVLLG-----QGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLA  472 (1015)
Q Consensus       398 ~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~-----~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~  472 (1015)
                      +...|.+|.+|+|.|+++|..+..+..+.     ++..+|..+..|.||||.|+..|+.++++.+++.|...+...-.  
T Consensus       180 ~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~--  257 (929)
T KOG0510|consen  180 PCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLD--  257 (929)
T ss_pred             CCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhH--
Confidence            56788999999999999999999999998     68899999999999999999999999999999999776543211  


Q ss_pred             cCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHH
Q psy14874        473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALH  552 (1015)
Q Consensus       473 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~  552 (1015)
                               ........++..|++|.||||+||++|+.++++.|+..|+++                 +.++.++.||||
T Consensus       258 ---------~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I-----------------~~kn~d~~spLH  311 (929)
T KOG0510|consen  258 ---------AMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASI-----------------NSKNKDEESPLH  311 (929)
T ss_pred             ---------HHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcc-----------------cccCCCCCCchH
Confidence                     223444567888999999999999999999999999999999                 667789999999


Q ss_pred             HHHHcCcHHHHHHHHh-cCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHhcCChH
Q psy14874        553 LAAMNGYADLCRFLVH-DHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID---ATDDQGQKPIHVAAQNNFPE  628 (1015)
Q Consensus       553 ~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~---~~d~~g~t~l~~A~~~~~~~  628 (1015)
                      .||..|+.+.|+.||+ .+....+..|..|+||||+|+.+|+.+++++|++.|+...   ..|.+|.||||.|+..|+..
T Consensus       312 ~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~  391 (929)
T KOG0510|consen  312 FAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTS  391 (929)
T ss_pred             HHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHH
Confidence            9999999999999998 6777888999999999999999999999999999999887   56999999999999999999


Q ss_pred             HHHHHHHhCCcc
Q psy14874        629 VAQIFLRAHPSL  640 (1015)
Q Consensus       629 ~~~~ll~~~~~~  640 (1015)
                      +|+.|+.++.+.
T Consensus       392 av~~Li~~Ga~I  403 (929)
T KOG0510|consen  392 AVQKLISHGADI  403 (929)
T ss_pred             HHHHHHHcCCce
Confidence            999999988765

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=5.3e-40  Score=380.96  Aligned_cols=408  Identities=16%  Similarity=0.143  Sum_probs=290.5

Q ss_pred             CCcHHHHH-----HHcCCHHHHHHHHhCC-CCCCCC-CCCCCcHHHHHHHc--CCHHHHHHHHhccCccccccccCCCCH
Q psy14874         54 GRSALHLA-----AEHGYLKVCDALLTHK-AFINSK-SRVGRTALHLAAMN--GYADLCRFLVHDHAAVIDILTLRKQTP  124 (1015)
Q Consensus        54 g~t~L~~A-----~~~g~~~iv~~Ll~~g-a~in~~-~~~g~t~L~~A~~~--g~~eiv~~Ll~~~~~~i~~~~~~g~t~  124 (1015)
                      +..+++..     .+.++.++|++|+++| +++|.+ +..|.||||.|+..  ++.+++++|++ .|++++..+..|.||
T Consensus       137 d~~~~~~y~~al~~~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe-~GADVN~kD~~G~TP  215 (764)
T PHA02716        137 DMDILYTYFNSPNTRGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCN-NGVNVNLQNNHLITP  215 (764)
T ss_pred             cchHHHHHHhhhcccCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHH-cCCCCCCCCCCCCCH
Confidence            44455544     3568999999999999 999998 88999999998754  67899999994 688999999999999


Q ss_pred             HHHHHHcCC--HHHHHHHHHCCCCCCCCCCCCCcHHHHHH---HcCChHHHHHHhhcCCCCcccCCCCCchHHH---HHH
Q psy14874        125 LHLAAEAGQ--LQVCKLLLDLGASIDATDDQGQKPIHVAA---QNNFPEVAQIFLRAHPSLVTATTKDGNTCAH---IAA  196 (1015)
Q Consensus       125 L~~Aa~~g~--~~ivk~Ll~~gad~n~~d~~~~t~L~~A~---~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~---~A~  196 (1015)
                      ||+|+..|+  .++|++|+++||++|.+|..|.||||+|+   .+++.++++.|++..... .  ......+++   .|+
T Consensus       216 LH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n-~--~~~~~~~L~~~i~AA  292 (764)
T PHA02716        216 LHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGN-K--VKNIPMILHSYITLA  292 (764)
T ss_pred             HHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccc-c--cccchhhhHHHHHHH
Confidence            999999995  58999999999999999999999999885   568899999998864321 1  111122333   477


Q ss_pred             HcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-------
Q psy14874        197 MQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAE--GGHANVVRVLVKAGASCTDENKTGFTAVHLAAQN-------  267 (1015)
Q Consensus       197 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~--~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~-------  267 (1015)
                      ..|+.++++.|++.+++.   ...+..|.||||.|+.  .++.+++++|+++|++++.+|..|.||||.|+..       
T Consensus       293 ~~g~leiVklLLe~GAdI---N~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~l  369 (764)
T PHA02716        293 RNIDISVVYSFLQPGVKL---HYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNIL  369 (764)
T ss_pred             HcCCHHHHHHHHhCCCce---eccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccc
Confidence            888889999888876653   2335578889988764  4578889999999998888888889999887652       


Q ss_pred             -------CCHHHHHHHHhCCCccccccccCCCHHHH----HHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCC
Q psy14874        268 -------GHNQVLEEMRSSKALNVYSKKLGVTALHV----AAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESG  336 (1015)
Q Consensus       268 -------~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~----A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (1015)
                             ++.+++++|++.|++....+..|.||||.    |...+..++++.|++.+....                   
T Consensus       370 d~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~-------------------  430 (764)
T PHA02716        370 DPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNM-------------------  430 (764)
T ss_pred             cccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhh-------------------
Confidence                   45556666666665555555555555552    112344555555554311000                   


Q ss_pred             CCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcC
Q psy14874        337 MTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG  416 (1015)
Q Consensus       337 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g  416 (1015)
                        .        ..+.++.++..         ......++|.++..+..++..++.+....                ....
T Consensus       431 --~--------~~~~~q~ll~~---------~d~~~~~lhh~~a~~~~~~~~~~~~~~~~----------------~~~~  475 (764)
T PHA02716        431 --V--------KHRILQDLLIR---------VDDTPCIIHHIIAKYNIPTDLYTDEYEPY----------------DSTK  475 (764)
T ss_pred             --h--------hhhhhhhhhhc---------cCcchhhHHHHHHhcCcchhhhhhhhhhc----------------cccc
Confidence              0        00011112211         01111235666665555543333221111                0012


Q ss_pred             CHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCH-----HHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhh
Q psy14874        417 HLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV-----GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQ  491 (1015)
Q Consensus       417 ~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~-----~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  491 (1015)
                      ..+++..++..++++|..|..|.||||+|+..|+.     +++++|++.|++++..                        
T Consensus       476 ~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~------------------------  531 (764)
T PHA02716        476 IHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIP------------------------  531 (764)
T ss_pred             cchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCccc------------------------
Confidence            23455555667788999999999999999999886     4559999999998865                        


Q ss_pred             hcCCCCCcHHHHHHHcCCH-----HHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHH
Q psy14874        492 SADKNGKTCLHIAATHGHL-----QMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL  566 (1015)
Q Consensus       492 ~~~~~g~t~L~~A~~~g~~-----~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L  566 (1015)
                        |++|+||||+|+.+|+.     ++|+.|+++|++++..                       .|++|...++.+++.+|
T Consensus       532 --d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~-----------------------~l~~~~~~~~~~~~~ll  586 (764)
T PHA02716        532 --TKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV-----------------------IIFLDKCYANGKFPSLL  586 (764)
T ss_pred             --CCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH-----------------------HHHHHhhhhhhHHHHHH
Confidence              79999999999999976     9999999999998642                       57888888899999988


Q ss_pred             HhcCC
Q psy14874        567 VHDHA  571 (1015)
Q Consensus       567 l~~~~  571 (1015)
                      ..++.
T Consensus       587 ~~~~~  591 (764)
T PHA02716        587 LSEDD  591 (764)
T ss_pred             HHcch
Confidence            87655

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=100.00  E-value=2e-38  Score=388.25  Aligned_cols=396  Identities=21%  Similarity=0.214  Sum_probs=304.2

Q ss_pred             CCccHHHHHHhCCCHHHHHHHHHh--cchhhcccCCCCCcHHH-HHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHH
Q psy14874        370 NGYNPLHLACFGGHVTVVGLLLSR--AADLLQSADKNGKTCLH-IAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAA  446 (1015)
Q Consensus       370 ~g~tpL~~A~~~g~~~iv~~Ll~~--~~~~~~~~d~~g~t~L~-~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~  446 (1015)
                      .++.+++.|++.|+.+.++.+++.  +.+ ++..|..|+|||| .|+.+++.+++++|+++|+    .+..|.||||.|+
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~-in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~   90 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEEPKKLN-INCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAIS   90 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhccccccC-CCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHH
Confidence            456788888888888888888877  444 5677888999999 8888888899999998887    6678889999888


Q ss_pred             HhCCHH----HHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q psy14874        447 RYGHVG----IINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAE  522 (1015)
Q Consensus       447 ~~g~~~----~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~  522 (1015)
                      . +..+    +++.+.+.+.+.+..                ....+........|.||||+|+.+|+.++|++|+++|++
T Consensus        91 ~-~~~~~v~~ll~~l~~~~~~~~~~----------------~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAd  153 (743)
T TIGR00870        91 L-EYVDAVEAILLHLLAAFRKSGPL----------------ELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGAS  153 (743)
T ss_pred             h-ccHHHHHHHHHHHhhcccccCch----------------hhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCC
Confidence            6 2333    333333333211100                000000112245799999999999999999999999999


Q ss_pred             CcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcC---------C
Q psy14874        523 INATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG---------Q  593 (1015)
Q Consensus       523 ~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~---------~  593 (1015)
                      ++..+.-.... .  .........|+||||.|+..|+.+++++|++++. +++..|..|+||||+|+..+         .
T Consensus       154 v~~~~~~~~~~-~--~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ga-din~~d~~g~T~Lh~A~~~~~~~~~~~~l~  229 (743)
T TIGR00870       154 VPARACGDFFV-K--SQGVDSFYHGESPLNAAACLGSPSIVALLSEDPA-DILTADSLGNTLLHLLVMENEFKAEYEELS  229 (743)
T ss_pred             CCcCcCCchhh-c--CCCCCcccccccHHHHHHHhCCHHHHHHHhcCCc-chhhHhhhhhHHHHHHHhhhhhhHHHHHHH
Confidence            98543210000 0  0001122468999999999999999999997664 67889999999999999987         2


Q ss_pred             HHHHHHHHHcCCCC-------CCCCCCCCCHHHHHHhcCChHHHHHHHHhCCccccccchhhhhHHHHHHhcccchhhHH
Q psy14874        594 LQVCKLLLDLGASI-------DATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMAT  666 (1015)
Q Consensus       594 ~~iv~~Ll~~ga~~-------~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~  666 (1015)
                      ..+.+++++.++..       +..|..|.||+++|+..|+.++++.+++                               
T Consensus       230 ~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~-------------------------------  278 (743)
T TIGR00870       230 CQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLA-------------------------------  278 (743)
T ss_pred             HHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHH-------------------------------
Confidence            34566777666554       5679999999999999999999886654                               


Q ss_pred             HHHHHHcCCCcccccccccccCCchHHHHHHHhhhhHHHHHHHHHHHHHHHHhccchh-----HHHHHHHHHHHHhccCc
Q psy14874        667 ELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNW-----AAWKTMLLFLTFILCPP  741 (1015)
Q Consensus       667 ~ll~~~~~~~e~~~il~~~~~~~~~~L~~ai~~~~k~fvah~~~q~~L~~~w~~~~~~-----~~~~~l~~~~~~~l~~~  741 (1015)
                                                    ++.++|+|++||.||..++..|++.++.     ..++.++...+.+..|.
T Consensus       279 ------------------------------~~~~~kk~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~p~  328 (743)
T TIGR00870       279 ------------------------------IKYKQKKFVAWPNGQQLLSLYWLEELDGWRRKQSVLELIVVFVIGLKFPE  328 (743)
T ss_pred             ------------------------------HHHhcceeeccCcchHhHhhhccccCCcccccccHHHHHHHHHHhhcChH
Confidence                                          3556899999999999999999988753     45566666666678899


Q ss_pred             hhhHhhhccCCc---cCCchhHHHHHhhhcHHHHHHHHHHhhcccCccc----ccCCCCcchHHHHHHHHHHHHHHhhhc
Q psy14874        742 VWICFTLSLGHK---YNKVPIIKFMSYLTSHMYLMFLLMLVGITPIYPV----VRPNLVPYWYEWTLLVWLSGLLLFELT  814 (1015)
Q Consensus       742 ~~i~~~~~~~~~---~~~~P~~~f~~~~~s~~~fl~L~~~~~~~~~~~~----~~~~~~p~~~e~~~~~~v~gl~~~e~~  814 (1015)
                      ....+...|.++   +...|++||++|+.||++|++|++++......+.    ...+..|++.||++++|++|++|+|++
T Consensus       329 ~~~~~~~~P~~~l~~~kw~pf~kf~~~~~~~~~fl~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~e~~  408 (743)
T TIGR00870       329 LSDMYLIAPLSRLGQFKWKPFIKFIFHSASYLYFLYLIIFTSVAYYRPTRTDLRVTGLQQTPLEMLIVTWVDGLRLGEEK  408 (743)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCCCcchhhHHHHHHHHHHHHHH
Confidence            888888877654   4478999999999999999999998775543321    133567899999999999999999999


Q ss_pred             CCCCCCCchHHHHHHHHHHHhhhhhhhhhhhhhhhcCC
Q psy14874        815 NPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEGK  852 (1015)
Q Consensus       815 ~~~~~~~~~~~~~~wn~~~~~~~~~~~~~~~~~~~~~~  852 (1015)
                      ++|..|...|++++||++|++++.+|+.++.+|.....
T Consensus       409 ~~~~~g~~~y~~~~wn~~d~~~~~~~~~~~~~~~~~~~  446 (743)
T TIGR00870       409 LIWLGGIFEYIHQLWNILDFGMNSFYLATFLDRPFAIL  446 (743)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence            99999999999999999999999999999998876553

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=8.4e-36  Score=342.87  Aligned_cols=208  Identities=29%  Similarity=0.433  Sum_probs=143.0

Q ss_pred             HHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCC
Q psy14874        384 VTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK  463 (1015)
Q Consensus       384 ~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~  463 (1015)
                      .++++.+++.|.+ ++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus       104 ~~~i~~ll~~g~d-~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~  182 (434)
T PHA02874        104 KDMIKTILDCGID-VNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAY  182 (434)
T ss_pred             HHHHHHHHHCcCC-CCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC
Confidence            3455555555555 345566677777777777777777777777777777777777777777777777777777777766


Q ss_pred             CcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhcccccccc
Q psy14874        464 VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSK  543 (1015)
Q Consensus       464 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~  543 (1015)
                      ++..                          +..|.||||.|+..|+.+++++|+++|+++                 +.+
T Consensus       183 ~n~~--------------------------~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i-----------------~~~  219 (434)
T PHA02874        183 ANVK--------------------------DNNGESPLHNAAEYGDYACIKLLIDHGNHI-----------------MNK  219 (434)
T ss_pred             CCCC--------------------------CCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-----------------cCC
Confidence            6543                          466777777777777777777777777766                 334


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q psy14874        544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG-QLQVCKLLLDLGASIDATDDQGQKPIHVAA  622 (1015)
Q Consensus       544 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~-~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~  622 (1015)
                      +..|.||||.|+..+. +.+++|+.  +..++.+|..|+||||+|+..+ +.+++++|+++|++++.+|..|.|||++|+
T Consensus       220 ~~~g~TpL~~A~~~~~-~~i~~Ll~--~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~  296 (434)
T PHA02874        220 CKNGFTPLHNAIIHNR-SAIELLIN--NASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAF  296 (434)
T ss_pred             CCCCCCHHHHHHHCCh-HHHHHHHc--CCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence            5567777777777654 45555553  3345667777777777777754 677777777777777777777777777777


Q ss_pred             hcC-ChHHHHHHHHhCC
Q psy14874        623 QNN-FPEVAQIFLRAHP  638 (1015)
Q Consensus       623 ~~~-~~~~~~~ll~~~~  638 (1015)
                      ..+ ..++++.++....
T Consensus       297 ~~~~~~~~ik~ll~~~~  313 (434)
T PHA02874        297 KYINKDPVIKDIIANAV  313 (434)
T ss_pred             HhCCccHHHHHHHHhcC
Confidence            765 5666677766543

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.4e-35  Score=340.95  Aligned_cols=339  Identities=19%  Similarity=0.252  Sum_probs=244.3

Q ss_pred             cHHHHHHhcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy14874         23 TPLLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD  101 (1015)
Q Consensus        23 t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~e  101 (1015)
                      ..|..|+..|+++.|+.|++.+ ..++..+.+|.||||.|++.|+.++|++|+++|++++..+..|.||||.|+..|+.+
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~   82 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHD   82 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            4689999999999999999864 557888889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCc
Q psy14874        102 LCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV  181 (1015)
Q Consensus       102 iv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~  181 (1015)
                      ++++|++. +.+...          .+....+.++++.|++.|++++.++..|.||||+|+..|+.+++++|++.+.+ +
T Consensus        83 iv~~Ll~~-g~~~~~----------~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad-~  150 (434)
T PHA02874         83 IIKLLIDN-GVDTSI----------LPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGAD-V  150 (434)
T ss_pred             HHHHHHHC-CCCCCc----------chhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCC-C
Confidence            99999954 443322          23445678999999999999999999999999999999999999999998877 5


Q ss_pred             ccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Q psy14874        182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAV  261 (1015)
Q Consensus       182 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L  261 (1015)
                      +..+..|.||||+|+..|+.+++++|++.+....   ..+..|.||||.|+..|+.+++++|+++|++++..+..|.|||
T Consensus       151 n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n---~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL  227 (434)
T PHA02874        151 NIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN---VKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPL  227 (434)
T ss_pred             CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHH
Confidence            6778888888888888888888888887665432   2234677888888888888888888888888777777777887


Q ss_pred             HHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHH
Q psy14874        262 HLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLH  341 (1015)
Q Consensus       262 ~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~  341 (1015)
                      |.|+..+. +.+++|+ .++.....+.                                              .|.||||
T Consensus       228 ~~A~~~~~-~~i~~Ll-~~~~in~~d~----------------------------------------------~G~TpLh  259 (434)
T PHA02874        228 HNAIIHNR-SAIELLI-NNASINDQDI----------------------------------------------DGSTPLH  259 (434)
T ss_pred             HHHHHCCh-HHHHHHH-cCCCCCCcCC----------------------------------------------CCCCHHH
Confidence            77776654 3444444 2333333333                                              4555555


Q ss_pred             HHHhcC-CHHHHHHHHhhcCCCcccccccCCccHHHHHHhCC-CHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHH
Q psy14874        342 LAAYSG-NENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGG-HVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ  419 (1015)
Q Consensus       342 ~A~~~g-~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g-~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~  419 (1015)
                      +|+..+ +.+++++|++ .|++++.. +..|.|||+.|+..+ ..++++.|+.++..........+.+++..+...++.+
T Consensus       260 ~A~~~~~~~~iv~~Ll~-~gad~n~~-d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~~  337 (434)
T PHA02874        260 HAINPPCDIDIIDILLY-HKADISIK-DNKGENPIDTAFKYINKDPVIKDIIANAVLIKEADKLKDSDFLEHIEIKDNKE  337 (434)
T ss_pred             HHHhcCCcHHHHHHHHH-CcCCCCCC-CCCCCCHHHHHHHhCCccHHHHHHHHhcCchhhccccchhHHHHHHHHhccch
Confidence            555543 4555555554 35555543 334556666655554 4455555555554422211122234444444444444


Q ss_pred             HHHHHhh
Q psy14874        420 MVEVLLG  426 (1015)
Q Consensus       420 iv~~Ll~  426 (1015)
                      +.+++.+
T Consensus       338 ~~~~~~~  344 (434)
T PHA02874        338 FSDFIKE  344 (434)
T ss_pred             HHHHHHH
Confidence            4444443

>KOG0508|consensus

Probab=100.00  E-value=7.7e-36  Score=307.69  Aligned_cols=201  Identities=28%  Similarity=0.448  Sum_probs=182.7

Q ss_pred             CChhHhhHhhccCCCCCCcHHHHHHhcCCHHHHHHHHhC-CCCCCC--------CCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14874          5 MSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNN-HARVDV--------FDQEGRSALHLAAEHGYLKVCDALLT   75 (1015)
Q Consensus         5 ~~~~~~~~~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~--------~d~~g~t~L~~A~~~g~~~iv~~Ll~   75 (1015)
                      .+.+++...++.. .+|.|||.+||++||.++|++|+++ ++++..        ...+|-+||..|+-.|+.++|+.|++
T Consensus        27 ~s~~ei~~l~~~~-~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~  105 (615)
T KOG0508|consen   27 SSNEEIISLIGEV-QNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLR  105 (615)
T ss_pred             CchHHHHHHhccc-cCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHH
Confidence            3456677777764 5677999999999999999999994 444432        23467889999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q psy14874         76 HKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQ  155 (1015)
Q Consensus        76 ~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~  155 (1015)
                      +|+++|..+....|||..||..|+.|+||+|+ .++++++..|..|.|.|++||..|+.+++++|++.|||+|.++..|.
T Consensus       106 ~ga~VN~tT~TNStPLraACfDG~leivKyLv-E~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGN  184 (615)
T KOG0508|consen  106 RGASVNDTTRTNSTPLRAACFDGHLEIVKYLV-EHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGN  184 (615)
T ss_pred             hcCccccccccCCccHHHHHhcchhHHHHHHH-HcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCc
Confidence            99999999999999999999999999999999 67999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHh
Q psy14874        156 KPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMK  209 (1015)
Q Consensus       156 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~  209 (1015)
                      |+||.|+++|+.|++++|++++...  ..|..|.|||..|+..|+.++++.|+.
T Consensus       185 TALH~caEsG~vdivq~Ll~~ga~i--~~d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  185 TALHDCAESGSVDIVQLLLKHGAKI--DVDGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             hHHHhhhhcccHHHHHHHHhCCcee--eecCCCCchHHHHhhhcchHHHHHHhc
Confidence            9999999999999999999998863  567779999999999999999999996

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.8e-35  Score=343.50  Aligned_cols=285  Identities=24%  Similarity=0.275  Sum_probs=263.3

Q ss_pred             HHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC---CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-CHH
Q psy14874         26 LIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHG---YLKVCDALLTHKAFINSKSRVGRTALHLAAMNG-YAD  101 (1015)
Q Consensus        26 ~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g---~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g-~~e  101 (1015)
                      ..|+..++.++|++|+++|+++|..+..|.||||+|+..|   +.+++++|+++|+++|.++..|.||||+|+..| +.+
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~   98 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLD   98 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHH
Confidence            5678889999999999999999999999999999999999   999999999999999999999999999999999 599


Q ss_pred             HHHHHHhccCccccccccCCCCHHHHHH--HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC--ChHHHHHHhhcC
Q psy14874        102 LCRFLVHDHAAVIDILTLRKQTPLHLAA--EAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN--FPEVAQIFLRAH  177 (1015)
Q Consensus       102 iv~~Ll~~~~~~i~~~~~~g~t~L~~Aa--~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g--~~~iv~~Ll~~~  177 (1015)
                      ++++|+ +.+++++..+..|.||||+|+  ..++.+++++|++.|++++..|..|.||||+|+..+  +.+++++|++.+
T Consensus        99 iv~lLl-~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g  177 (471)
T PHA03095         99 VIKLLI-KAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAG  177 (471)
T ss_pred             HHHHHH-HcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcC
Confidence            999999 568899999999999999999  567899999999999999999999999999999876  679999999999


Q ss_pred             CCCcccCCCCCchHHHHHHHc--CCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCH--HHHHHHHHcCCCCCCC
Q psy14874        178 PSLVTATTKDGNTCAHIAAMQ--GSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHA--NVVRVLVKAGASCTDE  253 (1015)
Q Consensus       178 ~~~~~~~~~~g~t~L~~A~~~--g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~--~iv~~Ll~~ga~~~~~  253 (1015)
                      .+... .+..|.||||+++..  ++.++++.|++.+.+..   ..+..|.||||.|+..|+.  .+++.|++.|++++..
T Consensus       178 ~~~~~-~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~---~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~  253 (471)
T PHA03095        178 ADVYA-VDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPA---ATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINAR  253 (471)
T ss_pred             CCCcc-cCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCc
Confidence            88544 489999999999875  78999999999877643   3456789999999999975  6889999999999999


Q ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCC
Q psy14874        254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPG  315 (1015)
Q Consensus       254 ~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~  315 (1015)
                      |..|.||||+|+..|+.+++++|++.|++....+..|.||++.|+..|+.++++.|++.++.
T Consensus       254 d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~  315 (471)
T PHA03095        254 NRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPS  315 (471)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999999999999999999999987644

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.3e-35  Score=346.01  Aligned_cols=288  Identities=24%  Similarity=0.329  Sum_probs=210.2

Q ss_pred             CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH-----HHHcCCHHHHHHH
Q psy14874         32 GHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL-----AAMNGYADLCRFL  106 (1015)
Q Consensus        32 g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~-----A~~~g~~eiv~~L  106 (1015)
                      ...++++++++.+-..+..+..+.||||.|++.|+.++|++|+++|++++..+..|.||||+     |+..|+.+++++|
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~L   92 (480)
T PHA03100         13 IKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLL   92 (480)
T ss_pred             HHHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHH
Confidence            34577888887775566667788888888888888888888888888888888888888888     8888888888888


Q ss_pred             HhccCccccccccCCCCHHHHHH--HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC--ChHHHHHHhhcCCCCcc
Q psy14874        107 VHDHAAVIDILTLRKQTPLHLAA--EAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN--FPEVAQIFLRAHPSLVT  182 (1015)
Q Consensus       107 l~~~~~~i~~~~~~g~t~L~~Aa--~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g--~~~iv~~Ll~~~~~~~~  182 (1015)
                      ++ .+++++..+..|.||||+|+  ..|+.+++++|+++|++++..+..|.||||+|+..|  +.+++++|++++.+. +
T Consensus        93 l~-~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~di-n  170 (480)
T PHA03100         93 LE-YGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDI-N  170 (480)
T ss_pred             HH-CCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCc-c
Confidence            74 56666777777888888888  788888888888888888777777777777777777  666666666655441 1


Q ss_pred             cCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Q psy14874        183 ATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVH  262 (1015)
Q Consensus       183 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~  262 (1015)
                      ..+                                    ..|.||||.|+..|+.+++++|+++|++++..+..+.++.+
T Consensus       171 ~~d------------------------------------~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~  214 (480)
T PHA03100        171 AKN------------------------------------RYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTI  214 (480)
T ss_pred             ccc------------------------------------CCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHH
Confidence            111                                    13446666666666777777777777777766666666555


Q ss_pred             HHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHH
Q psy14874        263 LAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHL  342 (1015)
Q Consensus       263 ~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~  342 (1015)
                      .                                                                               
T Consensus       215 ~-------------------------------------------------------------------------------  215 (480)
T PHA03100        215 F-------------------------------------------------------------------------------  215 (480)
T ss_pred             H-------------------------------------------------------------------------------
Confidence            4                                                                               


Q ss_pred             HHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCC--HHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHH
Q psy14874        343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGH--VTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM  420 (1015)
Q Consensus       343 A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~--~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~i  420 (1015)
                                                   .||||.|+..|+  .+++++|+++|++ ++..|..|.||||+|+..|+.++
T Consensus       216 -----------------------------~t~l~~a~~~~~~~~~iv~~Ll~~g~d-in~~d~~g~TpL~~A~~~~~~~i  265 (480)
T PHA03100        216 -----------------------------ETPLHIAACYNEITLEVVNYLLSYGVP-INIKDVYGFTPLHYAVYNNNPEF  265 (480)
T ss_pred             -----------------------------HhHHHHHHHhCcCcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHH
Confidence                                         245555555555  5555555555554 35566778888888888888888


Q ss_pred             HHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcc
Q psy14874        421 VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDV  466 (1015)
Q Consensus       421 v~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~  466 (1015)
                      +++|+++|++++.+|..|.||+++|+..++.+++++|+++|++++.
T Consensus       266 v~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~  311 (480)
T PHA03100        266 VKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT  311 (480)
T ss_pred             HHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHH
Confidence            8888888888888888888888888888888888888888876653

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2e-35  Score=346.55  Aligned_cols=263  Identities=24%  Similarity=0.323  Sum_probs=208.0

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH-----HHHcCCHHHHHHHHhCCCCCCCCCCCCC
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL-----AAEHGYLKVCDALLTHKAFINSKSRVGR   88 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~-----A~~~g~~~iv~~Ll~~ga~in~~~~~g~   88 (1015)
                      .+..+..|.||||.|++.|+.++|++|+++|++++..+..+.||||+     |+..|+.+++++|+++|++++..+..|.
T Consensus        28 ~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~  107 (480)
T PHA03100         28 NDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGI  107 (480)
T ss_pred             chhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCC
Confidence            45667889999999999999999999999999999999999999999     9999999999999999999999999999


Q ss_pred             cHHHHHH--HcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Q psy14874         89 TALHLAA--MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG--QLQVCKLLLDLGASIDATDDQGQKPIHVAAQN  164 (1015)
Q Consensus        89 t~L~~A~--~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g--~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~  164 (1015)
                      ||||+|+  ..|+.+++++|++ .+++++..+..|.||||+|+..|  +.+++++|+++|++++..|..|.||||+|+..
T Consensus       108 tpL~~A~~~~~~~~~iv~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~  186 (480)
T PHA03100        108 TPLLYAISKKSNSYSIVEYLLD-NGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEK  186 (480)
T ss_pred             chhhHHHhcccChHHHHHHHHH-cCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHh
Confidence            9999999  9999999999995 68889999999999999999999  99999999999999999999999999999999


Q ss_pred             CChHHHHHHhhcCCCCcccCCCCC------chHHHHHHHcCC--HHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCC
Q psy14874        165 NFPEVAQIFLRAHPSLVTATTKDG------NTCAHIAAMQGS--VGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGH  236 (1015)
Q Consensus       165 g~~~iv~~Ll~~~~~~~~~~~~~g------~t~L~~A~~~g~--~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~  236 (1015)
                      |+.+++++|++++.+ ....+..|      .||+|.|+..|+  .+++++|++.+.+..   ..+..|.||||.|+..|+
T Consensus       187 ~~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din---~~d~~g~TpL~~A~~~~~  262 (480)
T PHA03100        187 GNIDVIKFLLDNGAD-INAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPIN---IKDVYGFTPLHYAVYNNN  262 (480)
T ss_pred             CCHHHHHHHHHcCCC-ccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHcCC
Confidence            999999999999887 55667777      455555555555  555555555433321   112344455555555555


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Q psy14874        237 ANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA  281 (1015)
Q Consensus       237 ~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~  281 (1015)
                      .+++++|+++|++++..+..|.||+++|+..++.+++++|++.|+
T Consensus       263 ~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~  307 (480)
T PHA03100        263 PEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGP  307 (480)
T ss_pred             HHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCC
Confidence            555555555555555555555555555555555555555555444

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.4e-34  Score=323.17  Aligned_cols=220  Identities=13%  Similarity=0.073  Sum_probs=122.6

Q ss_pred             cHHHHHHhcCCHH--HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH-HHHHHHhCCCCCCCCCCCCCcHHHHH-HHcC
Q psy14874         23 TPLLIACNRGHME--LVNTMLNNHARVDVFDQEGRSALHLAAEHGYLK-VCDALLTHKAFINSKSRVGRTALHLA-AMNG   98 (1015)
Q Consensus        23 t~L~~A~~~g~~~--iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~-iv~~Ll~~ga~in~~~~~g~t~L~~A-~~~g   98 (1015)
                      +.|.-.|+.=+.+  -.+.|++.|+++-. ..+|.||||.=..+.+.. =++.++.-|..++.++-+|.+++|+- +.+|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~   83 (631)
T PHA02792          5 KILYDSCKTFNIDACSAQSLIESGANPLY-EYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNI   83 (631)
T ss_pred             hHHHhHhhccchhHHHHHHHHHcCCCccc-ccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcc
Confidence            3344444443332  23455555555432 344556665554433311 12233333333344444555555542 3345


Q ss_pred             CHHHHHHHHhccCccccccccCCCCHHHHHHH-cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCh-HHHHHHhhc
Q psy14874         99 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAE-AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFP-EVAQIFLRA  176 (1015)
Q Consensus        99 ~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~-~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~-~iv~~Ll~~  176 (1015)
                      +.|+|++|++ +|+++|..+..+.+|+++|+. .|+.|++++|+++|||++..+..|.||++.-+..... +--+.    
T Consensus        84 ~lElvk~LI~-~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~----  158 (631)
T PHA02792         84 DIELLKLLIS-KGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDE----  158 (631)
T ss_pred             cHHHHHHHHH-cCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhh----
Confidence            5555555553 355555555555555555533 4555555555555555555555555555443321100 00000    


Q ss_pred             CCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcC-------CHHHHHHHHHcCCC
Q psy14874        177 HPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGG-------HANVVRVLVKAGAS  249 (1015)
Q Consensus       177 ~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g-------~~~iv~~Ll~~ga~  249 (1015)
                                                     .+-+.-+...+..+..|.||||+|+.++       +.++++.|+++|++
T Consensus       159 -------------------------------~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~  207 (631)
T PHA02792        159 -------------------------------LDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKE  207 (631)
T ss_pred             -------------------------------ccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCC
Confidence                                           0000011122344556788888888888       79999999999999


Q ss_pred             CCCCCCCCCCHHHHHHHcC--CHHHHHHHHhC
Q psy14874        250 CTDENKTGFTAVHLAAQNG--HNQVLEEMRSS  279 (1015)
Q Consensus       250 ~~~~~~~~~t~L~~A~~~~--~~~iv~~Ll~~  279 (1015)
                      ++..|..|.||||+|+.+.  +.++++.|++.
T Consensus       208 ~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~  239 (631)
T PHA02792        208 MRYYTYREHTTLYYYVDKCDIKREIFDALFDS  239 (631)
T ss_pred             cCccCCCCChHHHHHHHcccchHHHHHHHHhc
Confidence            9999999999999999999  88999999885

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=9e-35  Score=340.32  Aligned_cols=266  Identities=26%  Similarity=0.303  Sum_probs=244.9

Q ss_pred             hccCCCCCCcHHHHHHhcC---CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCCCCCCCCCCc
Q psy14874         14 LNKQTSIGWTPLLIACNRG---HMELVNTMLNNHARVDVFDQEGRSALHLAAEHG-YLKVCDALLTHKAFINSKSRVGRT   89 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g---~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g-~~~iv~~Ll~~ga~in~~~~~g~t   89 (1015)
                      +|.++..|.||||.|+..|   +.+++++|+++|+++|..+..|.||||+|+..| +.+++++|+++|++++.++..|.|
T Consensus        40 vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~t  119 (471)
T PHA03095         40 VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRT  119 (471)
T ss_pred             cccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCC
Confidence            5788999999999999999   999999999999999999999999999999999 599999999999999999999999


Q ss_pred             HHHHHH--HcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc-
Q psy14874         90 ALHLAA--MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG--QLQVCKLLLDLGASIDATDDQGQKPIHVAAQN-  164 (1015)
Q Consensus        90 ~L~~A~--~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g--~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~-  164 (1015)
                      |||+|+  ..++.+++++|++ .+++++..+..|.||||.|+..+  +.+++++|++.|++++..|..|.||||+|+.. 
T Consensus       120 pLh~a~~~~~~~~~iv~~Ll~-~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~  198 (471)
T PHA03095        120 PLHVYLSGFNINPKVIRLLLR-KGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSF  198 (471)
T ss_pred             HHHHHhhCCcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHC
Confidence            999999  5678999999994 68899999999999999999876  68999999999999999999999999999875 


Q ss_pred             -CChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCH--HHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHH
Q psy14874        165 -NFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSV--GVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR  241 (1015)
Q Consensus       165 -g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~--~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~  241 (1015)
                       ++.++++.|++.+.+ .+..+..|.||||+|+..|+.  .+++.+++.+.+..   ..+..|.||||+|+..|+.++++
T Consensus       199 ~~~~~i~~~Ll~~g~~-~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din---~~d~~g~TpLh~A~~~~~~~~v~  274 (471)
T PHA03095        199 KPRARIVRELIRAGCD-PAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISIN---ARNRYGQTPLHYAAVFNNPRACR  274 (471)
T ss_pred             CCcHHHHHHHHHcCCC-CcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHcCCHHHHH
Confidence             778999999999887 688999999999999999975  57888888765533   33467999999999999999999


Q ss_pred             HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc
Q psy14874        242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNV  284 (1015)
Q Consensus       242 ~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~  284 (1015)
                      +|+++|++++..+.+|.|||+.|+.+|+.++++.|++.++...
T Consensus       275 ~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~  317 (471)
T PHA03095        275 RLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE  317 (471)
T ss_pred             HHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHH
Confidence            9999999999999999999999999999999999999887554

>KOG0508|consensus

Probab=100.00  E-value=3.8e-33  Score=287.91  Aligned_cols=213  Identities=28%  Similarity=0.390  Sum_probs=184.3

Q ss_pred             HHHhcCCHHHHHHHHhCCCCCC-----CCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCC--------CCCCCCCcHHH
Q psy14874         27 IACNRGHMELVNTMLNNHARVD-----VFDQEGRSALHLAAEHGYLKVCDALLT-HKAFIN--------SKSRVGRTALH   92 (1015)
Q Consensus        27 ~A~~~g~~~iv~~Ll~~g~~~~-----~~d~~g~t~L~~A~~~g~~~iv~~Ll~-~ga~in--------~~~~~g~t~L~   92 (1015)
                      .|++.|++..++.|+.+..+..     -.+.+|.|||..|+++|+.++|++|++ .++++.        .....|.+||-
T Consensus        10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLW   89 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLW   89 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhh
Confidence            6888888888877777543211     135678899999999999999999998 456543        33456889999


Q ss_pred             HHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHH
Q psy14874         93 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI  172 (1015)
Q Consensus        93 ~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~  172 (1015)
                      .|+..||+++|+.|++ .++++|....-..|||..||..|++++||||+++|||++..|..|.|.|++|+..|+.+|+++
T Consensus        90 aAsaAGHl~vVk~L~~-~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qy  168 (615)
T KOG0508|consen   90 AASAAGHLEVVKLLLR-RGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQY  168 (615)
T ss_pred             HHhccCcHHHHHHHHH-hcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHH
Confidence            9999999999999995 568999888888899999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy14874        173 FLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVK  245 (1015)
Q Consensus       173 Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~  245 (1015)
                      |++.+++ ++.++..|+|+||.|+.+|++++++.|++++.....    +..|.|||..|+..|+.++|++|++
T Consensus       169 Lle~gAD-vn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~----d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  169 LLEQGAD-VNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV----DGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             HHHhCCC-cchhcccCchHHHhhhhcccHHHHHHHHhCCceeee----cCCCCchHHHHhhhcchHHHHHHhc
Confidence            9999998 788999999999999999999999999998776443    3358899999999999999999987

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.5e-33  Score=324.05  Aligned_cols=306  Identities=24%  Similarity=0.317  Sum_probs=185.8

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHc
Q psy14874        221 RVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF  300 (1015)
Q Consensus       221 ~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~  300 (1015)
                      ...+.||||.|++.|+.++|++|+++|++++..|.+|.||||+|+..|+.+.++.|++.+.....  ..+.++++.|+..
T Consensus        34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~l~~a~~~  111 (477)
T PHA02878         34 SLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV--FYTLVAIKDAFNN  111 (477)
T ss_pred             cccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc--ccchhhHHHHHHc
Confidence            34677999999999999999999999999999999999999999999999999999987653332  3456777777777


Q ss_pred             CCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHh
Q psy14874        301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACF  380 (1015)
Q Consensus       301 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~  380 (1015)
                      ++.++++.|+..+.......               ....+......+.                                
T Consensus       112 ~~~ei~~~Ll~~~~~~~~~~---------------~~~~~~~~~~~~~--------------------------------  144 (477)
T PHA02878        112 RNVEIFKIILTNRYKNIQTI---------------DLVYIDKKSKDDI--------------------------------  144 (477)
T ss_pred             CCHHHHHHHHhCcccCcccC---------------cHHHHhhccchhh--------------------------------
Confidence            77777777776532110000               0000000000000                                


Q ss_pred             CCCHHHHHHHHHhcchhhcccCCC-CCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHh
Q psy14874        381 GGHVTVVGLLLSRAADLLQSADKN-GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ  459 (1015)
Q Consensus       381 ~g~~~iv~~Ll~~~~~~~~~~d~~-g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  459 (1015)
                       .+.+++++|+++|++ ++..+.. |.||||+|+..|+.+++++|+++|++++..|..|.||||.|+..|+.+++++|++
T Consensus       145 -~~~~iv~~Ll~~gad-in~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~  222 (477)
T PHA02878        145 -IEAEITKLLLSYGAD-INMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLE  222 (477)
T ss_pred             -HHHHHHHHHHHcCCC-CCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence             122455555555555 3444444 5666666666666666666666666666666666666666666666666666666


Q ss_pred             cCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHc-CCHHHHHHHHhcCCCCcchhhHHHhhhhccc
Q psy14874        460 KGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH-GHLQMVEVLLGQGAEINATDKVCDALLTHKA  538 (1015)
Q Consensus       460 ~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~  538 (1015)
                      +|++++..                          |..|.||||+|+.. ++.+++++|+++|++++.             
T Consensus       223 ~ga~in~~--------------------------d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~-------------  263 (477)
T PHA02878        223 NGASTDAR--------------------------DKCGNTPLHISVGYCKDYDILKLLLEHGVDVNA-------------  263 (477)
T ss_pred             cCCCCCCC--------------------------CCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCc-------------
Confidence            66555433                          45566666666543 456666666666665532             


Q ss_pred             cccccCC-CCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcC-CHHHHHHHHHc-----CCCCCCCC
Q psy14874        539 FINSKSR-VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG-QLQVCKLLLDL-----GASIDATD  611 (1015)
Q Consensus       539 ~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~-~~~iv~~Ll~~-----ga~~~~~d  611 (1015)
                          ++. .|.||||+|  .++.+++++|++.+ .+++..|.+|.||||.|+..+ ..+++++|+..     +.+++..+
T Consensus       264 ----~~~~~g~TpLh~A--~~~~~~v~~Ll~~g-adin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~  336 (477)
T PHA02878        264 ----KSYILGLTALHSS--IKSERKLKLLLEYG-ADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKN  336 (477)
T ss_pred             ----cCCCCCCCHHHHH--ccCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccC
Confidence                222 456666666  34555566666443 334556666666666666532 34455555443     45666666


Q ss_pred             CCCCCHHHHHHh
Q psy14874        612 DQGQKPIHVAAQ  623 (1015)
Q Consensus       612 ~~g~t~l~~A~~  623 (1015)
                      ..|.++-..++.
T Consensus       337 ~~g~~~n~~~i~  348 (477)
T PHA02878        337 SEGFIDNMDCIT  348 (477)
T ss_pred             cHHHHHHHHHHh
Confidence            666655444433

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=3e-33  Score=294.51  Aligned_cols=234  Identities=19%  Similarity=0.191  Sum_probs=187.7

Q ss_pred             cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcc
Q psy14874         31 RGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH  110 (1015)
Q Consensus        31 ~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~  110 (1015)
                      .++.+++++|+++|++  ..|.+|+||||+|+..|+.+++++|+++|++++..+  |.||||+|+..|+.+++++|++ .
T Consensus         9 ~~~~~~~~~Lis~~a~--~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~-~   83 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF--KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLF-S   83 (284)
T ss_pred             cCHHHHHHHHHhCCCC--CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHH-C
Confidence            3678999999999885  478999999999999999999999999999888764  7899999999999999999994 6


Q ss_pred             CccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-cHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCc
Q psy14874        111 AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQ-KPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGN  189 (1015)
Q Consensus       111 ~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~-t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~  189 (1015)
                      +++++..+..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+|+..|+.+++++|+++++....  ...|.
T Consensus        84 Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d--~~~g~  161 (284)
T PHA02791         84 GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILL  161 (284)
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccc--cccCc
Confidence            788899999999999999999999999999999999999888884 899999999999999999987654211  12467


Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q psy14874        190 TCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATP-LQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNG  268 (1015)
Q Consensus       190 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~-L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~  268 (1015)
                      ||||+|+..|+.++++.|++++++...   .+..|.|| ||.|+..|+.+++++|+++|++++.+|..+ +++      +
T Consensus       162 TpLh~Aa~~g~~eiv~lLL~~gAd~n~---~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l------~  231 (284)
T PHA02791        162 SCIHITIKNGHVDMMILLLDYMTSTNT---NNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL------D  231 (284)
T ss_pred             cHHHHHHHcCCHHHHHHHHHCCCCCCc---ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC------C
Confidence            777777777777777777777665332   22234444 777777777777777777777777777643 333      6


Q ss_pred             CHHHHHHHHhCCC
Q psy14874        269 HNQVLEEMRSSKA  281 (1015)
Q Consensus       269 ~~~iv~~Ll~~~~  281 (1015)
                      +.|++++|+++..
T Consensus       232 ~~e~~~~ll~~~~  244 (284)
T PHA02791        232 DAEIAKMIIEKHV  244 (284)
T ss_pred             CHHHHHHHHHhhh
Confidence            6667777776554

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=6.1e-33  Score=318.10  Aligned_cols=243  Identities=21%  Similarity=0.216  Sum_probs=219.8

Q ss_pred             CCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy14874         21 GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA  100 (1015)
Q Consensus        21 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~  100 (1015)
                      .+++||.|++.|+.+++++|+++|+++|..+.+|.||||+|+..|+.+++++|+++|++++..+..+.||||.|+..|+.
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~   81 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDV   81 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCH
Confidence            57999999999999999999999999999999999999999999999999999999999999989999999999999999


Q ss_pred             HHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCC
Q psy14874        101 DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL  180 (1015)
Q Consensus       101 eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~  180 (1015)
                      +++++|++.+....+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++.+ 
T Consensus        82 ~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~-  160 (413)
T PHA02875         82 KAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKAC-  160 (413)
T ss_pred             HHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC-
Confidence            9999999765555566677899999999999999999999999999999999999999999999999999999999886 


Q ss_pred             cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC---CCCC
Q psy14874        181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDE---NKTG  257 (1015)
Q Consensus       181 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~---~~~~  257 (1015)
                      .+..+..|.||||+|+..|+.+++++|++.+++....  ....+.||+++|+..|+.+++++|+++|++++..   +..+
T Consensus       161 ~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~--~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~  238 (413)
T PHA02875        161 LDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYF--GKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEE  238 (413)
T ss_pred             CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcC--CCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCc
Confidence            6778999999999999999999999999988775433  2334568999999999999999999999998864   5567


Q ss_pred             CCHHHHHHH
Q psy14874        258 FTAVHLAAQ  266 (1015)
Q Consensus       258 ~t~L~~A~~  266 (1015)
                      .||++.+..
T Consensus       239 ~t~l~~~~~  247 (413)
T PHA02875        239 CTILDMICN  247 (413)
T ss_pred             hHHHHHHHh
Confidence            788877653

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.9e-33  Score=323.72  Aligned_cols=287  Identities=18%  Similarity=0.211  Sum_probs=244.1

Q ss_pred             ccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy14874         15 NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLA   94 (1015)
Q Consensus        15 n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A   94 (1015)
                      +..+..|.||||.|++.|+.++|++|+++|+++|..|.+|+||||+|+..|+.+++++|++.+...+.  ..+.++++.|
T Consensus        31 ~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~l~~a  108 (477)
T PHA02878         31 TSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV--FYTLVAIKDA  108 (477)
T ss_pred             CcccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc--ccchhhHHHH
Confidence            44556789999999999999999999999999999999999999999999999999999998876554  5678999999


Q ss_pred             HHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHc--CCHHHHHHHHHCCCCCCCCCCC-CCcHHHHHHHcCChHHHH
Q psy14874         95 AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEA--GQLQVCKLLLDLGASIDATDDQ-GQKPIHVAAQNNFPEVAQ  171 (1015)
Q Consensus        95 ~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~--g~~~ivk~Ll~~gad~n~~d~~-~~t~L~~A~~~g~~~iv~  171 (1015)
                      +..|+.+++++|+..+.......   ....+..+...  .+.+++++|+++|++++..+.. |.||||+|+..|+.++++
T Consensus       109 ~~~~~~ei~~~Ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~  185 (477)
T PHA02878        109 FNNRNVEIFKIILTNRYKNIQTI---DLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTE  185 (477)
T ss_pred             HHcCCHHHHHHHHhCcccCcccC---cHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHH
Confidence            99999999999996432111100   01111111112  2356999999999999999999 999999999999999999


Q ss_pred             HHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCC
Q psy14874        172 IFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEG-GHANVVRVLVKAGASC  250 (1015)
Q Consensus       172 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~-g~~~iv~~Ll~~ga~~  250 (1015)
                      +|++++++ ++..+..|.||||.|+..|+.++++.|++.+.+..   ..+..|.||||+|+.. ++.+++++|+++|+++
T Consensus       186 ~Ll~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in---~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadv  261 (477)
T PHA02878        186 LLLSYGAN-VNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD---ARDKCGNTPLHISVGYCKDYDILKLLLEHGVDV  261 (477)
T ss_pred             HHHHCCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCC
Confidence            99999887 67889999999999999999999999999876643   3345799999999975 7899999999999999


Q ss_pred             CCCCC-CCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcC-CHHHHHHHHhc
Q psy14874        251 TDENK-TGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFG-QADTVRELLSH  312 (1015)
Q Consensus       251 ~~~~~-~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~-~~~~v~~Ll~~  312 (1015)
                      +..+. .|.||||.|  .++.+++++|++.|++....+..|.||++.|+..+ ..++.+.++.+
T Consensus       262 n~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~  323 (477)
T PHA02878        262 NAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISN  323 (477)
T ss_pred             CccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHH
Confidence            99876 799999999  57789999999999999999999999999999754 45677777654

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.8e-32  Score=304.68  Aligned_cols=416  Identities=15%  Similarity=0.113  Sum_probs=298.6

Q ss_pred             CCCCCcHHHHHHhcCCH-HHHHHHHhCCCCCCCCCCCCCcHHHH-HHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy14874         18 TSIGWTPLLIACNRGHM-ELVNTMLNNHARVDVFDQEGRSALHL-AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAA   95 (1015)
Q Consensus        18 ~~~g~t~L~~A~~~g~~-~iv~~Ll~~g~~~~~~d~~g~t~L~~-A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~   95 (1015)
                      ..+|.||||.=..+.|. .-++.++.-|.+++..+-+|..|+|+ |+.+|++++|++|+++||++|.++..|.+|+++|+
T Consensus        34 ~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~  113 (631)
T PHA02792         34 EYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYAT  113 (631)
T ss_pred             ccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEee
Confidence            36788999998777663 33556666666777788888999988 55789999999999999999999999999999996


Q ss_pred             H-cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCC-HHHHHHHH--HCCCCCCCCCCCCCcHHHHHHHcC------
Q psy14874         96 M-NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ-LQVCKLLL--DLGASIDATDDQGQKPIHVAAQNN------  165 (1015)
Q Consensus        96 ~-~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~-~~ivk~Ll--~~gad~n~~d~~~~t~L~~A~~~g------  165 (1015)
                      . .++.|++++|++ .|+++++.+..|.||++.-+.... .+.=..+-  +.|-.+|..|..|.||||+|+.++      
T Consensus       114 ~~~~~~eivk~Ll~-~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~  192 (631)
T PHA02792        114 TSNPNVDVFKLLLD-KGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYA  192 (631)
T ss_pred             cCCCChHHHHHHHH-CCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCccccc
Confidence            6 699999999995 588888888999999987665322 11111221  234557788899999999999999      


Q ss_pred             -ChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcC--CHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHH
Q psy14874        166 -FPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG--SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV  242 (1015)
Q Consensus       166 -~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~  242 (1015)
                       +.|+++.|++++++ +...|..|.||||+|+.+.  +.|+++.|++...+.     ..  ....           +..+
T Consensus       193 ~~~~v~k~Li~~g~~-~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~-----~~--~~~~-----------l~~y  253 (631)
T PHA02792        193 TSLDVINYLISHEKE-MRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSG-----NE--LMNI-----------LSNY  253 (631)
T ss_pred             CCHHHHHHHHhCCCC-cCccCCCCChHHHHHHHcccchHHHHHHHHhccccc-----cc--hHhH-----------HHHH
Confidence             89999999999988 5678888999999999999  888999998721110     00  0001           1112


Q ss_pred             HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q psy14874        243 LVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPP  322 (1015)
Q Consensus       243 Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~  322 (1015)
                      |-.+- ..+..             +=+..+|..|++.+.....        +.........+.+..++....        
T Consensus       254 ~~~~~-~~~~~-------------~id~~iv~~ll~~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~--------  303 (631)
T PHA02792        254 LRKQY-RNKNH-------------KIDNYIVDKLLSGHDTFYI--------LELCNSLRNNIIISSILKRYT--------  303 (631)
T ss_pred             HHHHh-ccCcc-------------CccHHHHHHHHhCCCccch--------hhhhhhhhhhhHHHHHHHHHh--------
Confidence            21110 00000             0123466666665531111        000011111122222222110        


Q ss_pred             CCCccccccCCCCCCCHHHHHHhcC--CHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcc
Q psy14874        323 TGASFLGELGSESGMTPLHLAAYSG--NENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQS  400 (1015)
Q Consensus       323 ~~~~~~~~~~~~~~~t~L~~A~~~g--~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~  400 (1015)
                                 ..-+..||.-..++  +.+++++|++. |++.+.   .....+++.|+..|+.+++++|+++|++ ++.
T Consensus       304 -----------~~~q~~l~~Yl~~~~v~ieiIK~LId~-Ga~~~r---~~~~n~~~~Aa~~gn~eIVelLIs~GAD-IN~  367 (631)
T PHA02792        304 -----------DSIQDLLSEYVSYHTVYINVIKCMIDE-GATLYR---FKHINKYFQKFDNRDPKVVEYILKNGNV-VVE  367 (631)
T ss_pred             -----------HHHHHHHHHHHhcCCccHHHHHHHHHC-CCcccc---CCcchHHHHHHHcCCHHHHHHHHHcCCc-hhh
Confidence                       01122345555555  68899999974 887652   2255678999999999999999999999 466


Q ss_pred             cCCC--CCcHHHHHHHcCCH---HHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCc
Q psy14874        401 ADKN--GKTCLHIAATHGHL---QMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGH  475 (1015)
Q Consensus       401 ~d~~--g~t~L~~A~~~g~~---~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~  475 (1015)
                      .|.+  +.||||.|+..+..   +++++|+++|+++|.+|..|.||||+|+..++.+++++|+++|++++..        
T Consensus       368 kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~k--------  439 (631)
T PHA02792        368 DDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINIT--------  439 (631)
T ss_pred             hcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCc--------
Confidence            6666  46999998877654   4689999999999999999999999999999999999999999998855        


Q ss_pred             hHHHHHHHHhhhhhhhhcCCCCCcHHHHHHH----------cCCHHHHHHHHhcCCCCcc
Q psy14874        476 VTVVGLLLSRAADLLQSADKNGKTCLHIAAT----------HGHLQMVEVLLGQGAEINA  525 (1015)
Q Consensus       476 ~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~----------~g~~~~v~~Ll~~ga~~~~  525 (1015)
                                        +..|.|||++|+.          ....++++.|+++|++++.
T Consensus       440 ------------------D~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~~  481 (631)
T PHA02792        440 ------------------TKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIEC  481 (631)
T ss_pred             ------------------CCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChhH
Confidence                              7899999999976          2236679999999988753

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.1e-32  Score=319.16  Aligned_cols=279  Identities=19%  Similarity=0.226  Sum_probs=238.4

Q ss_pred             cCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhc--CCHHHHHHHHhhcCCCcccccccCCccHHHH
Q psy14874        300 FGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYS--GNENVVRLLLNSAGVQVDAQTQENGYNPLHL  377 (1015)
Q Consensus       300 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~--g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~  377 (1015)
                      ..+.++++.|++++.+...             . ..|.++++.++..  ++.++|++|++ .|++++...  .+.||||.
T Consensus        13 ~~~~~~v~~LL~~GadvN~-------------~-~~g~t~l~~~~~~~~~~~~iv~~Ll~-~GAdvn~~~--~~~tpL~~   75 (494)
T PHA02989         13 TVDKNALEFLLRTGFDVNE-------------E-YRGNSILLLYLKRKDVKIKIVKLLID-NGADVNYKG--YIETPLCA   75 (494)
T ss_pred             cCcHHHHHHHHHcCCCccc-------------c-cCCCCHHHHHHhcCCCChHHHHHHHH-cCCCccCCC--CCCCcHHH
Confidence            4778999999998765422             1 3578888765544  37899999997 599998753  56899999


Q ss_pred             HHhCC------CHHHHHHHHHhcchhhcccCCCCCcHHHHHHHc---CCHHHHHHHhhCCCCc-ccCCCCCCCHHHHHHH
Q psy14874        378 ACFGG------HVTVVGLLLSRAADLLQSADKNGKTCLHIAATH---GHLQMVEVLLGQGAEI-NATDKGGARSIHTAAR  447 (1015)
Q Consensus       378 A~~~g------~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~i-~~~~~~g~t~L~~A~~  447 (1015)
                      |+.++      ..+++++|+++|++ ++..+..|.||||.|+..   |+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus        76 a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~  154 (494)
T PHA02989         76 VLRNREITSNKIKKIVKLLLKFGAD-INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLE  154 (494)
T ss_pred             HHhccCcchhhHHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHH
Confidence            98754      47899999999999 688899999999988765   6899999999999999 8999999999999876


Q ss_pred             h--CCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcC----CHHHHHHHHhcCC
Q psy14874        448 Y--GHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG----HLQMVEVLLGQGA  521 (1015)
Q Consensus       448 ~--g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g----~~~~v~~Ll~~ga  521 (1015)
                      .  ++.+++++|+++|++++..                         .+..|.||||.|+..+    +.+++++|+++|+
T Consensus       155 ~~~~~~~iv~~Ll~~Gadi~~~-------------------------~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga  209 (494)
T PHA02989        155 SFSVKKDVIKILLSFGVNLFEK-------------------------TSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGV  209 (494)
T ss_pred             hccCCHHHHHHHHHcCCCcccc-------------------------ccccCCChHHHHHhcccccccHHHHHHHHhCCC
Confidence            4  6899999999999988742                         2578999999998764    8999999999999


Q ss_pred             CCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcC------cHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHH
Q psy14874        522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG------YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQ  595 (1015)
Q Consensus       522 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g------~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~  595 (1015)
                      +++                 .++..+.||||.++..+      ..+++++|+. + .+++.+|..|+||||+|+..|+.+
T Consensus       210 ~vn-----------------~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~-advn~~d~~G~TpL~~Aa~~~~~~  270 (494)
T PHA02989        210 NIE-----------------TNNNGSESVLESFLDNNKILSKKEFKVLNFILK-Y-IKINKKDKKGFNPLLISAKVDNYE  270 (494)
T ss_pred             Ccc-----------------ccCCccccHHHHHHHhchhhcccchHHHHHHHh-C-CCCCCCCCCCCCHHHHHHHhcCHH
Confidence            985                 45567899999877643      5678888775 3 678999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCcc
Q psy14874        596 VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL  640 (1015)
Q Consensus       596 iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~~  640 (1015)
                      ++++|+++|+|++.+|..|+||||+|+..++.++++.|++..|..
T Consensus       271 ~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~~  315 (494)
T PHA02989        271 AFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPGK  315 (494)
T ss_pred             HHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCh
Confidence            999999999999999999999999999999999999999987643

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.5e-32  Score=318.63  Aligned_cols=276  Identities=19%  Similarity=0.199  Sum_probs=240.1

Q ss_pred             cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc--CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC------CHHH
Q psy14874         31 RGHMELVNTMLNNHARVDVFDQEGRSALHLAAEH--GYLKVCDALLTHKAFINSKSRVGRTALHLAAMNG------YADL  102 (1015)
Q Consensus        31 ~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~--g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g------~~ei  102 (1015)
                      ..+.++|++|+++|+++|.. .+|.||||.++..  ++.++|++|+++||++|.++ .+.||||.|+.++      +.++
T Consensus        13 ~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~i   90 (494)
T PHA02989         13 TVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKI   90 (494)
T ss_pred             cCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHH
Confidence            47899999999999999988 6789998876544  37899999999999999886 5799999998754      5789


Q ss_pred             HHHHHhccCccccccccCCCCHHHHHHHc---CCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHc--CChHHHHHHhhc
Q psy14874        103 CRFLVHDHAAVIDILTLRKQTPLHLAAEA---GQLQVCKLLLDLGASI-DATDDQGQKPIHVAAQN--NFPEVAQIFLRA  176 (1015)
Q Consensus       103 v~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~---g~~~ivk~Ll~~gad~-n~~d~~~~t~L~~A~~~--g~~~iv~~Ll~~  176 (1015)
                      +++|+ ++|+++|..+..|.||||.|+..   |+.+++++|+++|||+ +..|..|.||||+|+..  ++.+++++|+++
T Consensus        91 v~~Ll-~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~  169 (494)
T PHA02989         91 VKLLL-KFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF  169 (494)
T ss_pred             HHHHH-HCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc
Confidence            99999 56889999999999999988765   6899999999999999 89999999999998764  688999999999


Q ss_pred             CCCCcccCCCCCchHHHHHHHcC----CHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcC------CHHHHHHHHHc
Q psy14874        177 HPSLVTATTKDGNTCAHIAAMQG----SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGG------HANVVRVLVKA  246 (1015)
Q Consensus       177 ~~~~~~~~~~~g~t~L~~A~~~g----~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g------~~~iv~~Ll~~  246 (1015)
                      |.+.....+..|.||+|+|+..+    +.+++++|++.+.+....   +..+.++++.++..+      ..+++++|++ 
T Consensus       170 Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~---~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-  245 (494)
T PHA02989        170 GVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETN---NNGSESVLESFLDNNKILSKKEFKVLNFILK-  245 (494)
T ss_pred             CCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCcccc---CCccccHHHHHHHhchhhcccchHHHHHHHh-
Confidence            98854446788999999998765    899999999988764332   236789999876543      5677887654 


Q ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcC
Q psy14874        247 GASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHV  313 (1015)
Q Consensus       247 ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~  313 (1015)
                      |++++.+|..|.||||+|+..++.+++++|++.|++....+..|.|||+.|+..++.++++.|++..
T Consensus       246 ~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~  312 (494)
T PHA02989        246 YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLK  312 (494)
T ss_pred             CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            7999999999999999999999999999999999999999999999999999999999999999864

>KOG4412|consensus

Probab=100.00  E-value=8.1e-34  Score=256.40  Aligned_cols=183  Identities=36%  Similarity=0.548  Sum_probs=163.9

Q ss_pred             HhhccCCC-CCCcHHHHHHhcCCHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCC
Q psy14874         12 KALNKQTS-IGWTPLLIACNRGHMELVNTML-NNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTH-KAFINSKSRVGR   88 (1015)
Q Consensus        12 ~~~n~~~~-~g~t~L~~A~~~g~~~iv~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~in~~~~~g~   88 (1015)
                      |-+|.++. +|+||||+||..|+.++|.+|+ +.+..+|..|..|+||||.|+..|+.++|+.|+.. |+|+|..++.|.
T Consensus        28 kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~  107 (226)
T KOG4412|consen   28 KSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQ  107 (226)
T ss_pred             hhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCc
Confidence            34555554 9999999999999999999999 55778888899999999999999999999999998 999999999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChH
Q psy14874         89 TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPE  168 (1015)
Q Consensus        89 t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~  168 (1015)
                      |+||+|+..|..+++++|++ +++.++.+|..|.||||.|+.-|.++++++|+..|+.+|.+|..|+||||.|...|+.+
T Consensus       108 T~LHyAagK~r~eIaqlLle-~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d  186 (226)
T KOG4412|consen  108 TCLHYAAGKGRLEIAQLLLE-KGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPD  186 (226)
T ss_pred             ceehhhhcCChhhHHHHHHh-cCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCch
Confidence            99999999999999999995 57899999999999999999999999999999999999999999999999998889999


Q ss_pred             HHHHHhhcCCCCcccCCCCCchHHHHHHH
Q psy14874        169 VAQIFLRAHPSLVTATTKDGNTCAHIAAM  197 (1015)
Q Consensus       169 iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~  197 (1015)
                      +..+|+.++++ ....|+.| |++..++.
T Consensus       187 ~a~lLV~~gAd-~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  187 VAVLLVRAGAD-TDREDKEG-TALRIACN  213 (226)
T ss_pred             HHHHHHHhccc-eeeccccC-chHHHHHH
Confidence            99999999976 56677777 88877653

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=8.4e-32  Score=283.56  Aligned_cols=236  Identities=18%  Similarity=0.196  Sum_probs=208.8

Q ss_pred             cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHC
Q psy14874         64 HGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL  143 (1015)
Q Consensus        64 ~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~  143 (1015)
                      .++.+++++|+++|+  +.+|..|.||||+|+..|+.+++++|++ .+++++..  +|+||||+|+..|+.+++++|++.
T Consensus         9 ~~~~~~~~~Lis~~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~-~ga~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~   83 (284)
T PHA02791          9 WKSKQLKSFLSSKDA--FKADVHGHSALYYAIADNNVRLVCTLLN-AGALKNLL--ENEFPLHQAATLEDTKIVKILLFS   83 (284)
T ss_pred             cCHHHHHHHHHhCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHH-CcCCCcCC--CCCCHHHHHHHCCCHHHHHHHHHC
Confidence            568999999999998  4578899999999999999999999995 56666665  478999999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCc-hHHHHHHHcCCHHHHHHHHhcCCcccccccCCC
Q psy14874        144 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGN-TCAHIAAMQGSVGVIEELMKFDRSGVISARNRV  222 (1015)
Q Consensus       144 gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~-t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~  222 (1015)
                      |++++.+|..|.||||+|+..|+.+++++|++++++ ++..+..|+ ||||+|+..|+.+++++|++.++...    ...
T Consensus        84 Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gad-in~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~----d~~  158 (284)
T PHA02791         84 GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF----DLA  158 (284)
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc----ccc
Confidence            999999999999999999999999999999999987 456777774 89999999999999999998754321    112


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH-HHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcC
Q psy14874        223 TEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTA-VHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFG  301 (1015)
Q Consensus       223 ~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~-L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~  301 (1015)
                      .|.||||+|+..|+.++++.|+++|++++..+..|.|| ||+|+.+|+.+++++|+++|++....+..+ +++      +
T Consensus       159 ~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l------~  231 (284)
T PHA02791        159 ILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL------D  231 (284)
T ss_pred             cCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC------C
Confidence            47899999999999999999999999999999999987 999999999999999999999887776643 444      8


Q ss_pred             CHHHHHHHHhcCCCC
Q psy14874        302 QADTVRELLSHVPGT  316 (1015)
Q Consensus       302 ~~~~v~~Ll~~~~~~  316 (1015)
                      +.|++++|+++....
T Consensus       232 ~~e~~~~ll~~~~~~  246 (284)
T PHA02791        232 DAEIAKMIIEKHVEY  246 (284)
T ss_pred             CHHHHHHHHHhhhhh
Confidence            899999999986554

>KOG4412|consensus

Probab=100.00  E-value=7.3e-33  Score=250.24  Aligned_cols=207  Identities=31%  Similarity=0.477  Sum_probs=179.5

Q ss_pred             CccHHHHHHhCCCHHHHHHHHHhcchhhccc-CCCCCcHHHHHHHcCCHHHHHHHh-hCCCCcccCCCCCCCHHHHHHHh
Q psy14874        371 GYNPLHLACFGGHVTVVGLLLSRAADLLQSA-DKNGKTCLHIAATHGHLQMVEVLL-GQGAEINATDKGGARSIHTAARY  448 (1015)
Q Consensus       371 g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~-d~~g~t~L~~A~~~g~~~iv~~Ll-~~ga~i~~~~~~g~t~L~~A~~~  448 (1015)
                      +.++.+.+|......-++.+++..+..++.+ |.+|+||||+||..|+.+++.+|+ +.+..+|..|..|+||||+|+..
T Consensus         3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~   82 (226)
T KOG4412|consen    3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASN   82 (226)
T ss_pred             ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhc
Confidence            3466777777777777888887777444544 448999999999999999999999 45888999999999999999999


Q ss_pred             CCHHHHHHHHhc-CCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchh
Q psy14874        449 GHVGIINTLLQK-GEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD  527 (1015)
Q Consensus       449 g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~  527 (1015)
                      |+.++|+.|+.+ |++++..                          +..|.|+||+|+..|..+++++|+++|+.+    
T Consensus        83 g~~evVk~Ll~r~~advna~--------------------------tn~G~T~LHyAagK~r~eIaqlLle~ga~i----  132 (226)
T KOG4412|consen   83 GNDEVVKELLNRSGADVNAT--------------------------TNGGQTCLHYAAGKGRLEIAQLLLEKGALI----  132 (226)
T ss_pred             CcHHHHHHHhcCCCCCccee--------------------------cCCCcceehhhhcCChhhHHHHHHhcCCCC----
Confidence            999999999998 8888765                          578999999999999999999999999888    


Q ss_pred             hHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q psy14874        528 KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI  607 (1015)
Q Consensus       528 ~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~  607 (1015)
                                   +.+|..|.||||-|+.-|..+++++|+..+ ..+|.+|..|+||||.|...|+.++..+|+++||++
T Consensus       133 -------------~~kD~~~qtplHRAAavGklkvie~Li~~~-a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~  198 (226)
T KOG4412|consen  133 -------------RIKDKQGQTPLHRAAAVGKLKVIEYLISQG-APLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADT  198 (226)
T ss_pred             -------------cccccccCchhHHHHhccchhhHHHHHhcC-CCCCcccccCccHHHHHHhccCchHHHHHHHhccce
Confidence                         557778999999999999999999999776 667999999999999998889999999999999999


Q ss_pred             CCCCCCCCCHHHHHH
Q psy14874        608 DATDDQGQKPIHVAA  622 (1015)
Q Consensus       608 ~~~d~~g~t~l~~A~  622 (1015)
                      +..|+.| ||+..|.
T Consensus       199 ~~edke~-t~~~~a~  212 (226)
T KOG4412|consen  199 DREDKEG-TALRIAC  212 (226)
T ss_pred             eeccccC-chHHHHH
Confidence            9999988 9987664

>PHA02798 ankyrin-like protein; Provisional

Probab=99.98  E-value=1.1e-30  Score=304.39  Aligned_cols=259  Identities=16%  Similarity=0.208  Sum_probs=192.7

Q ss_pred             CCCCcHHHHHHhc--CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc-----CCHHHHHHHHhCCCCCCCCCCCCCcHH
Q psy14874         19 SIGWTPLLIACNR--GHMELVNTMLNNHARVDVFDQEGRSALHLAAEH-----GYLKVCDALLTHKAFINSKSRVGRTAL   91 (1015)
Q Consensus        19 ~~g~t~L~~A~~~--g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~-----g~~~iv~~Ll~~ga~in~~~~~g~t~L   91 (1015)
                      ..|.|+++.+...  ++.++|++|+++|+++|..|..|.||||.|+.+     ++.+++++|+++|+++|.++..|.|||
T Consensus        34 ~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpL  113 (489)
T PHA02798         34 VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPL  113 (489)
T ss_pred             cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHH
Confidence            4566776644433  478888888888888888888888888888754     668888888888888888888888888


Q ss_pred             HHHHHcC---CHHHHHHHHhccCccccccccCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHc
Q psy14874         92 HLAAMNG---YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ---LQVCKLLLDLGASIDATD-DQGQKPIHVAAQN  164 (1015)
Q Consensus        92 ~~A~~~g---~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~---~~ivk~Ll~~gad~n~~d-~~~~t~L~~A~~~  164 (1015)
                      |+|+.+|   +.+++++|+ +.|++++..+..|.||||+|+..|+   .+++++|+++|++++..+ ..|.||||.++..
T Consensus       114 h~a~~~~~~~~~~iv~~Ll-~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~  192 (489)
T PHA02798        114 YCLLSNGYINNLEILLFMI-ENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKY  192 (489)
T ss_pred             HHHHHcCCcChHHHHHHHH-HcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHh
Confidence            8888875   678888888 4577888888888888888888877   888888888888888774 4677888887654


Q ss_pred             ----CChHHHHHHhhcCCCCcccCCCCCchHHH-------HHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHH
Q psy14874        165 ----NFPEVAQIFLRAHPSLVTATTKDGNTCAH-------IAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAE  233 (1015)
Q Consensus       165 ----g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~-------~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~  233 (1015)
                          ++.+++++|+++|.+ ++..+..|.++++       ++...++.++++.|+.. .   .....+..|.||||.|+.
T Consensus       193 ~~~~~~~~ivk~Li~~Ga~-i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~-~---dvN~~d~~G~TPL~~A~~  267 (489)
T PHA02798        193 NIDRIDADILKLFVDNGFI-INKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSY-I---DINQVDELGFNPLYYSVS  267 (489)
T ss_pred             ccccCCHHHHHHHHHCCCC-cccCCccccchHHHHHHHHHhhcccchHHHHHHHHhc-C---CCCCcCcCCccHHHHHHH
Confidence                467888888888776 4555666666655       23445566677666652 1   122333467777777777


Q ss_pred             cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Q psy14874        234 GGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALN  283 (1015)
Q Consensus       234 ~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~  283 (1015)
                      .|+.+++++|+++|++++..+..|.|||+.|+.+++.++++.|++.++..
T Consensus       268 ~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~  317 (489)
T PHA02798        268 HNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNK  317 (489)
T ss_pred             cCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCH
Confidence            77777777777777777777777777777777777777777777766543

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.98  E-value=1.5e-30  Score=298.23  Aligned_cols=252  Identities=21%  Similarity=0.322  Sum_probs=215.5

Q ss_pred             CCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHc
Q psy14874        336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH  415 (1015)
Q Consensus       336 ~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~  415 (1015)
                      .+++|+.|+..|+.+++++|++ .|++++.. ...|.||||+|+..|+.+++++|+++|++ ++..+..+.||||.|+..
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~-~g~~~n~~-~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~t~L~~A~~~   78 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLD-IGINPNFE-IYDGISPIKLAMKFRDSEAIKLLMKHGAI-PDVKYPDIESELHDAVEE   78 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHH-CCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCcccHHHHHHHC
Confidence            4689999999999999999997 48888864 45799999999999999999999999987 566678889999999999


Q ss_pred             CCHHHHHHHhhCCCCcc-cCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcC
Q psy14874        416 GHLQMVEVLLGQGAEIN-ATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSAD  494 (1015)
Q Consensus       416 g~~~iv~~Ll~~ga~i~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~  494 (1015)
                      |+.++++.|++.|++++ ..+..|.||||.|+..|+.+++++|+++|++++..                          +
T Consensus        79 g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~--------------------------~  132 (413)
T PHA02875         79 GDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIP--------------------------N  132 (413)
T ss_pred             CCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCC--------------------------C
Confidence            99999999999998764 45678999999999999999999999999988754                          6


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccc
Q psy14874        495 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVI  574 (1015)
Q Consensus       495 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~  574 (1015)
                      ..|.||||.|+..|+.+++++|+++|+++                 +.++..|.||||+|+..|+.+++++|++.+... 
T Consensus       133 ~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~-----------------~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~-  194 (413)
T PHA02875        133 TDKFSPLHLAVMMGDIKGIELLIDHKACL-----------------DIEDCCGCTPLIIAMAKGDIAICKMLLDSGANI-  194 (413)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhcCCCC-----------------CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-
Confidence            78999999999999999999999999988                 456778999999999999999999999876654 


Q ss_pred             cccccCC-CCHHHHHHHcCCHHHHHHHHHcCCCCCCC---CCCCCCHHHHHHhc---CChHHHHHHH
Q psy14874        575 DILTLRK-QTPLHLAAEAGQLQVCKLLLDLGASIDAT---DDQGQKPIHVAAQN---NFPEVAQIFL  634 (1015)
Q Consensus       575 ~~~~~~g-~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~---d~~g~t~l~~A~~~---~~~~~~~~ll  634 (1015)
                      +..+..| .||+|+|+..|+.+++++|+++|++++..   +..+.||++.++..   ...+.++.++
T Consensus       195 n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li  261 (413)
T PHA02875        195 DYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICNMCTNLESEAIDALI  261 (413)
T ss_pred             CcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHhhcCCcccHHHHHHH
Confidence            5555555 58899999999999999999999999865   66788999876533   3344444444

>PHA02798 ankyrin-like protein; Provisional

Probab=99.97  E-value=9.2e-30  Score=296.65  Aligned_cols=277  Identities=14%  Similarity=0.152  Sum_probs=236.9

Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc-----CCHHHHHH
Q psy14874         33 HMELVNTMLNNHARVDVFDQEGRSALHLAA--EHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN-----GYADLCRF  105 (1015)
Q Consensus        33 ~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~--~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~-----g~~eiv~~  105 (1015)
                      ..+.|+.|++.+ +++.. ..+.|+++.+.  ..++.++|++|+++|+++|.++..|.||||.|+.+     ++.+++++
T Consensus        17 ~~~~v~~ll~~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~   94 (489)
T PHA02798         17 KLSTVKLLIKSC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKI   94 (489)
T ss_pred             cHHHHHHHHhcC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHH
Confidence            578999999875 44433 44667776444  44589999999999999999999999999999865     67999999


Q ss_pred             HHhccCccccccccCCCCHHHHHHHcC---CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC---hHHHHHHhhcCCC
Q psy14874        106 LVHDHAAVIDILTLRKQTPLHLAAEAG---QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNF---PEVAQIFLRAHPS  179 (1015)
Q Consensus       106 Ll~~~~~~i~~~~~~g~t~L~~Aa~~g---~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~---~~iv~~Ll~~~~~  179 (1015)
                      |+ ++|+++|..+..|.||||.|+.+|   +.+++++|+++||+++..|..|.||||+|++.|+   .+++++|++++.+
T Consensus        95 Ll-~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad  173 (489)
T PHA02798         95 LI-ENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD  173 (489)
T ss_pred             HH-HCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCC
Confidence            99 578999999999999999999986   7899999999999999999999999999999998   9999999999988


Q ss_pred             CcccCCCCCchHHHHHHHc----CCHHHHHHHHhcCCcccccccCCCCCCcHHH-------HHHHcCCHHHHHHHHHcCC
Q psy14874        180 LVTATTKDGNTCAHIAAMQ----GSVGVIEELMKFDRSGVISARNRVTEATPLQ-------LAAEGGHANVVRVLVKAGA  248 (1015)
Q Consensus       180 ~~~~~~~~g~t~L~~A~~~----g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~-------~A~~~g~~~iv~~Ll~~ga  248 (1015)
                      .....+..|.||+|.++..    ++.+++++|++.+.....   .+..+.++++       .+...++.+++.+|+. |+
T Consensus       174 in~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~---~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~  249 (489)
T PHA02798        174 INTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINK---ENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YI  249 (489)
T ss_pred             cccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCccc---CCccccchHHHHHHHHHhhcccchHHHHHHHHh-cC
Confidence            5444456789999998764    489999999998766432   2234556655       2445677888888766 69


Q ss_pred             CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCC
Q psy14874        249 SCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGT  316 (1015)
Q Consensus       249 ~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~  316 (1015)
                      ++|.+|..|.||||+|+..++.+++++|++.|++....+..|.|||+.|+..++.++++.+++.+++.
T Consensus       250 dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~  317 (489)
T PHA02798        250 DINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNK  317 (489)
T ss_pred             CCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999876544

>KOG3614|consensus

Probab=99.97  E-value=1.6e-30  Score=301.52  Aligned_cols=246  Identities=22%  Similarity=0.307  Sum_probs=209.0

Q ss_pred             HHHHHHhcCChHHHHHHHHhCCccccc-------------cch-hhhhHHHHHHhcccchhhHHHHHHHHcCCCccc--c
Q psy14874        617 PIHVAAQNNFPEVAQIFLRAHPSLVTA-------------TTK-EKERAKDLIAAGKHCEGMATELLALAAGADSAG--R  680 (1015)
Q Consensus       617 ~l~~A~~~~~~~~~~~ll~~~~~~~~~-------------~~~-~~~~~~~~~~~~~~~e~~a~~ll~~~~~~~e~~--~  680 (1015)
                      .+.||+..++.+|++++|+++.+.++.             ... ..+.+.++.+++.+++..|.+|+++|+.++|..  +
T Consensus       566 LlIWAvL~~R~~MA~~~W~~gee~~AkALvA~rLykslA~ea~d~~~~s~el~~~s~~f~~lAveLfd~cy~~de~~A~~  645 (1381)
T KOG3614|consen  566 LLIWAVLLNRQGMAKCLWAHGEEAVAKALVASRLYKSLAHEAHDWHEAAKELKTLSDEFEGLAVELFDECYSSDEARALQ  645 (1381)
T ss_pred             HHHHHHHhccHHHHHHHHHhchhHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence            467999999999999999999886543             122 367888999999999999999999999999954  4


Q ss_pred             ccccc--ccCCchHHHHHHHhhhhHHHHHHHHHHHHHHHHhccc---hhHHHHHHHHHHHHhccCchhhHhh--------
Q psy14874        681 ILTAT--DRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSL---NWAAWKTMLLFLTFILCPPVWICFT--------  747 (1015)
Q Consensus       681 il~~~--~~~~~~~L~~ai~~~~k~fvah~~~q~~L~~~w~~~~---~~~~~~~l~~~~~~~l~~~~~i~~~--------  747 (1015)
                      +|.+.  +.++.+||++|++++.|+|+|||.||.+|+.+|||.+   +.+.||.++++++++++.+..+.|.        
T Consensus       646 LLt~el~~W~~~tCL~LAv~a~~r~FiAH~c~Q~lLt~~W~G~L~~r~~~~~kvila~icpP~Il~l~~kfk~~~e~~~~  725 (1381)
T KOG3614|consen  646 LLTYELENWGNSTCLQLAVEANAREFIAHPCCQMLLTDKWYGNLQARNNPIWKVILALICPPLILTLLVKFKMSEETPSQ  725 (1381)
T ss_pred             HHHhHHhhcccccHHHHHHhcCCCceeccHhHHHHHHHHHhccccccCCCcHHHHHHHHhhHHHHHhhcchhhhhccCcc
Confidence            66654  5699999999999999999999999999999999998   5699999999999998877776662        


Q ss_pred             -----------------------------hc-c-------------------------CCccCCchhHHHHHhhhcHHHH
Q psy14874        748 -----------------------------LS-L-------------------------GHKYNKVPIIKFMSYLTSHMYL  772 (1015)
Q Consensus       748 -----------------------------~~-~-------------------------~~~~~~~P~~~f~~~~~s~~~f  772 (1015)
                                                   .. +                         ...|+.+|+++|+.|+++|+.|
T Consensus       726 t~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~r~~~~~~r~~~FysAPIvkFw~~~l~yi~F  805 (1381)
T KOG3614|consen  726 TVAELDVDKDPQKQRASSSYSSISSREEDLEAGPLSTRSKGDQSMVFPRPRPLGKLRRIRAFYSAPIVKFWLNVLSYIAF  805 (1381)
T ss_pred             cchhhhccccccccccccccCcccchhcccccccccccccCChhcccCCCCchhHHHHHHHHHcCchHHHHHHHHHHHHH
Confidence                                         00 0                         0146789999999999999999


Q ss_pred             HHHHHHhhcccCcccccCCCCcchHHHHHHHHHHHHHHhhhcCCCCC-------CCchHHHHHHHHHHHhhhhhhhhhhh
Q psy14874        773 MFLLMLVGITPIYPVVRPNLVPYWYEWTLLVWLSGLLLFELTNPSDK-------SGLGWVKLAVLLFGIFGVALHLLEYT  845 (1015)
Q Consensus       773 l~L~~~~~~~~~~~~~~~~~~p~~~e~~~~~~v~gl~~~e~~~~~~~-------~~~~~~~~~wn~~~~~~~~~~~~~~~  845 (1015)
                      |+||.|+++.++      .+.|+++||++|+||+.+++||+|+...-       ..+.|+.++||++|.+|+.+|++|+.
T Consensus       806 L~lftYvlLv~~------~~~Ps~~Ew~~~~~iftl~~E~vRq~~~se~~~l~~kv~v~f~d~wN~~d~~ai~~F~vG~~  879 (1381)
T KOG3614|consen  806 LLLFTYVLLVDF------QPSPSMWEWILFAWIFTLFLEEVRQIFISESGLLPQKVRVYFADFWNLIDLLAILLFLVGPV  879 (1381)
T ss_pred             HHHHHHHheecc------CCCCCccchhHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhhhe
Confidence            999999999888      57889999999999999999999974322       22469999999999999999999999


Q ss_pred             hhhhcCCcccccc-cchhhhhhhhhc
Q psy14874        846 FILSEGKITTHLL-PFQFVYNLMVCS  870 (1015)
Q Consensus       846 ~~~~~~~~~~~~~-~~~~~~~~~v~~  870 (1015)
                      ||+.+.  ++.+. |.++|+|+|+.+
T Consensus       880 ~Rl~~~--~~~~~GRvIl~~d~i~~t  903 (1381)
T KOG3614|consen  880 LRLLPI--DSIYSGRVILCFDFILFT  903 (1381)
T ss_pred             eEecCc--cceecceeeeeehHHHHH
Confidence            999882  33455 788899988873

>KOG0509|consensus

Probab=99.96  E-value=3.4e-28  Score=264.17  Aligned_cols=209  Identities=35%  Similarity=0.528  Sum_probs=178.0

Q ss_pred             ccHHHHHHhCCCHHHHHHHHHh-cchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCC-CCCCCHHHHHHHhC
Q psy14874        372 YNPLHLACFGGHVTVVGLLLSR-AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD-KGGARSIHTAARYG  449 (1015)
Q Consensus       372 ~tpL~~A~~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~-~~g~t~L~~A~~~g  449 (1015)
                      ...+..|++.|.++-++.+++. +.+ ++..|.+|.|+||+|+.+++++++++|+++|+++|... .-+.||||.|+++|
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~-v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G  123 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGES-VNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNG  123 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcC-CCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcC
Confidence            3556777888888888888887 555 56777889999999999999999999999999999888 56789999999999


Q ss_pred             CHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhH
Q psy14874        450 HVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKV  529 (1015)
Q Consensus       450 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~  529 (1015)
                      +..+++.|+++|++++..                          |..|.+|||.|++.|+.-+|-+|+.+|+++      
T Consensus       124 ~~~vv~lLlqhGAdpt~~--------------------------D~~G~~~lHla~~~~~~~~vayll~~~~d~------  171 (600)
T KOG0509|consen  124 HISVVDLLLQHGADPTLK--------------------------DKQGLTPLHLAAQFGHTALVAYLLSKGADI------  171 (600)
T ss_pred             cHHHHHHHHHcCCCCcee--------------------------cCCCCcHHHHHHHhCchHHHHHHHHhcccC------
Confidence            999999999999988765                          788999999999999999999999998887      


Q ss_pred             HHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy14874        530 CDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA  609 (1015)
Q Consensus       530 ~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~  609 (1015)
                                 +.+|.+|+||||+|+.+|+...++.|++-+....-..|.+|.||||.|+..||..++++|++.|++.+.
T Consensus       172 -----------d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~  240 (600)
T KOG0509|consen  172 -----------DLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDK  240 (600)
T ss_pred             -----------CCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCcccc
Confidence                       557778999999999999988888888666554333448999999999999999999988888999999


Q ss_pred             CCCCCCCHHHHHHhc
Q psy14874        610 TDDQGQKPIHVAAQN  624 (1015)
Q Consensus       610 ~d~~g~t~l~~A~~~  624 (1015)
                      +|.+|.||+.+|..+
T Consensus       241 ~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  241 TNTNGKTPFDLAQER  255 (600)
T ss_pred             cccCCCCHHHHHHHh
Confidence            999999999999765

>KOG0509|consensus

Probab=99.96  E-value=4e-28  Score=263.66  Aligned_cols=209  Identities=32%  Similarity=0.456  Sum_probs=173.4

Q ss_pred             CcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCC
Q psy14874         22 WTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS-RVGRTALHLAAMNGY   99 (1015)
Q Consensus        22 ~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~-~~g~t~L~~A~~~g~   99 (1015)
                      ..-.+.|++.|+++-|+.|++. |.+++..|.+|-|+||+||.+++.+++++|+++|+++|..+ .-+.||||+|+++|+
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~  124 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH  124 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence            3457889999999999999998 89999999999999999999999999999999999999987 568899999999999


Q ss_pred             HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874        100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~  179 (1015)
                      ..+|++|+ ++|++++..|.+|.+|+|.|+..|+.-+|-||+.+|+|+|.+|.+|+||||+|+..|+...+..|++-++.
T Consensus       125 ~~vv~lLl-qhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~  203 (600)
T KOG0509|consen  125 ISVVDLLL-QHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGAS  203 (600)
T ss_pred             HHHHHHHH-HcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccc
Confidence            99999999 67889999999999999999999999999999999999999999999999999998888878888877666


Q ss_pred             CcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q psy14874        180 LVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFT  259 (1015)
Q Consensus       180 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t  259 (1015)
                      .....+.                                    .|.||||+|+..|+..+++.+++.|++.+..|.+|.|
T Consensus       204 ~~~~d~~------------------------------------~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~t  247 (600)
T KOG0509|consen  204 LLLTDDN------------------------------------HGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKT  247 (600)
T ss_pred             ccccccc------------------------------------cCCchHHHHHhcCCcceEehhhhcCCcccccccCCCC
Confidence            4332234                                    4456666666666666666555666777777777777


Q ss_pred             HHHHHHHc
Q psy14874        260 AVHLAAQN  267 (1015)
Q Consensus       260 ~L~~A~~~  267 (1015)
                      |+.+|.++
T Consensus       248 p~~LA~~~  255 (600)
T KOG0509|consen  248 PFDLAQER  255 (600)
T ss_pred             HHHHHHHh
Confidence            77777665

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.94  E-value=1.2e-25  Score=229.07  Aligned_cols=182  Identities=16%  Similarity=0.162  Sum_probs=162.4

Q ss_pred             hhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCCCCCC-CCCCc
Q psy14874         13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHG--YLKVCDALLTHKAFINSKS-RVGRT   89 (1015)
Q Consensus        13 ~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g--~~~iv~~Ll~~ga~in~~~-~~g~t   89 (1015)
                      +.+.-.+.++||||.|++.|+.++|+.|++.   ++..|..|.||||+|+..+  +.+++++|+++|+++|.++ ..|.|
T Consensus        13 ~~~~~~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~T   89 (209)
T PHA02859         13 FTDYLFYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLS   89 (209)
T ss_pred             hHHHHhhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCC
Confidence            3444567889999999999999999999985   4667889999999999865  8999999999999999987 48999


Q ss_pred             HHHHHHHc---CCHHHHHHHHhccCccccccccCCCCHHHHHHH--cCCHHHHHHHHHCCCCCCCCCCCCCcHHHH-HHH
Q psy14874         90 ALHLAAMN---GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE--AGQLQVCKLLLDLGASIDATDDQGQKPIHV-AAQ  163 (1015)
Q Consensus        90 ~L~~A~~~---g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~--~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~-A~~  163 (1015)
                      |||+|+..   ++.+++++|+ +++++++..+..|.||||.|+.  .++.+++++|++.|++++.+|..|.||||. |+.
T Consensus        90 pLh~a~~~~~~~~~eiv~~Ll-~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~  168 (209)
T PHA02859         90 ALHHYLSFNKNVEPEILKILI-DSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILF  168 (209)
T ss_pred             HHHHHHHhCccccHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHh
Confidence            99998764   5799999999 5789999999999999999986  468999999999999999999999999995 567


Q ss_pred             cCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcC
Q psy14874        164 NNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG  199 (1015)
Q Consensus       164 ~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g  199 (1015)
                      .++.+++++|++.+.+ ++.++..|.||+++|..++
T Consensus       169 ~~~~~iv~~Ll~~Gad-i~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        169 HSDKKIFDFLTSLGID-INETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             cCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhhh
Confidence            8899999999999887 6788999999999998654

>PHA02795 ankyrin-like protein; Provisional

Probab=99.93  E-value=8.4e-25  Score=238.05  Aligned_cols=191  Identities=15%  Similarity=0.170  Sum_probs=147.5

Q ss_pred             hhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCC------CCCCCCCcHHHHHHH--cCCHHHHHHHHhCCCCCCCCC
Q psy14874         13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVD------VFDQEGRSALHLAAE--HGYLKVCDALLTHKAFINSKS   84 (1015)
Q Consensus        13 ~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~------~~d~~g~t~L~~A~~--~g~~~iv~~Ll~~ga~in~~~   84 (1015)
                      .||.++.+|     +|+..+..+++++|+++|+++|      ..+..++|+||.|+.  .|+.++|++|+++||+++.+ 
T Consensus        74 ~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~-  147 (437)
T PHA02795         74 NIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI-  147 (437)
T ss_pred             chhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC-
Confidence            355555555     7888888888888888888877      677778888888888  78888888888888888874 


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhccCcccccc-----ccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Q psy14874         85 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL-----TLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIH  159 (1015)
Q Consensus        85 ~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~-----~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~  159 (1015)
                       .+.||||.|+..|+.+++++|++.+....+..     +..+.+++|.|+..++.+++++|+++||++|.+|..|.||||
T Consensus       148 -~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh  226 (437)
T PHA02795        148 -ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLY  226 (437)
T ss_pred             -CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHH
Confidence             35788888888888888888885543232222     134678888888888888888888888888888888888888


Q ss_pred             HHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCC--------HHHHHHHHhcC
Q psy14874        160 VAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGS--------VGVIEELMKFD  211 (1015)
Q Consensus       160 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~--------~~iv~~Ll~~~  211 (1015)
                      +|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+        .++++.|++.+
T Consensus       227 ~Aa~~g~~eiVelLL~~GAd-IN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~g  285 (437)
T PHA02795        227 RAIYAGYIDLVSWLLENGAN-VNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREP  285 (437)
T ss_pred             HHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCC
Confidence            88888888888888888876 57778888888888887774        35555555443

>KOG4369|consensus

Probab=99.93  E-value=3.2e-26  Score=256.32  Aligned_cols=324  Identities=25%  Similarity=0.295  Sum_probs=290.1

Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHH
Q psy14874         17 QTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINS-KSRVGRTALHLAA   95 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~-~~~~g~t~L~~A~   95 (1015)
                      ...+-.|+|..||..||-|+|.+|+.+|+++..+|..|.+||.+|+-.||..+|+.|+++.++++. .|+.++|+|.+||
T Consensus       753 Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac  832 (2131)
T KOG4369|consen  753 TEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC  832 (2131)
T ss_pred             cCccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec
Confidence            346778999999999999999999999999999999999999999999999999999999999987 5788999999999


Q ss_pred             HcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC--CCCcHHHHHHHcCChHHHHHH
Q psy14874         96 MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD--QGQKPIHVAAQNNFPEVAQIF  173 (1015)
Q Consensus        96 ~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~--~~~t~L~~A~~~g~~~iv~~L  173 (1015)
                      ..|+.++|..|| ..+++-..++-...|||.+|..-|+.++++.|+..|+.+|.+..  .|..||.+|..+||...++.|
T Consensus       833 sggr~~vvelLl-~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~l  911 (2131)
T KOG4369|consen  833 SGGRTRVVELLL-NAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSL  911 (2131)
T ss_pred             CCCcchHHHHHH-HhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHH
Confidence            999999999999 56777777888899999999999999999999999999988754  678999999999999999999


Q ss_pred             hhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy14874        174 LRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDE  253 (1015)
Q Consensus       174 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~  253 (1015)
                      ++.+.++......+-+|+|-.|+..|..+++..|+...+.....   -..|.|||+-++..|.+|+=++|+.+|+|+|..
T Consensus       912 l~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehR---aktgltplme~AsgGyvdvg~~li~~gad~nas  988 (2131)
T KOG4369|consen  912 LQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHR---AKTGLTPLMEMASGGYVDVGNLLIAAGADTNAS  988 (2131)
T ss_pred             hcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhh---cccCCcccchhhcCCccccchhhhhcccccccC
Confidence            99998876667778889999999999999999999866553322   247889999999999999999999999998863


Q ss_pred             C--CCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcccccc
Q psy14874        254 N--KTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGEL  331 (1015)
Q Consensus       254 ~--~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~  331 (1015)
                      -  ....|+|-+++..|+...+..|+...+.....++.|.|+|-.|+..|....+..|++++.+....            
T Consensus       989 Pvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~q------------ 1056 (2131)
T KOG4369|consen  989 PVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQ------------ 1056 (2131)
T ss_pred             CCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhh------------
Confidence            2  23458899999999999999999999888899999999999999999999999999987665333            


Q ss_pred             CCCCCCCHHHHHHhcCCHHHHHHHHh
Q psy14874        332 GSESGMTPLHLAAYSGNENVVRLLLN  357 (1015)
Q Consensus       332 ~~~~~~t~L~~A~~~g~~~~v~~Ll~  357 (1015)
                       +....++++.|.+.|+.++|+++..
T Consensus      1057 -dnr~~S~~maafRKgh~~iVk~mv~ 1081 (2131)
T KOG4369|consen 1057 -DNRTNSRTMAAFRKGHFAIVKKMVP 1081 (2131)
T ss_pred             -hcccccccHHHHHhchhheeccccC
Confidence             3456788999999999999999874

>PHA02795 ankyrin-like protein; Provisional

Probab=99.93  E-value=1.2e-24  Score=236.82  Aligned_cols=189  Identities=17%  Similarity=0.158  Sum_probs=90.2

Q ss_pred             HHHhCCCHHHHHHHHHhcchhh-----cccCCCCCcHHHHHHH--cCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhC
Q psy14874        377 LACFGGHVTVVGLLLSRAADLL-----QSADKNGKTCLHIAAT--HGHLQMVEVLLGQGAEINATDKGGARSIHTAARYG  449 (1015)
Q Consensus       377 ~A~~~g~~~iv~~Ll~~~~~~~-----~~~d~~g~t~L~~A~~--~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g  449 (1015)
                      +|+..+..+++++|+++|+...     -.++.+++|+||.++.  .|+.+++++|+++||+++..  ++.||+|.|+..|
T Consensus        83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~  160 (437)
T PHA02795         83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKK  160 (437)
T ss_pred             HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcC
Confidence            4555555555555555555421     0234445555555555  45555555555555555542  2245555555555


Q ss_pred             CHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhH
Q psy14874        450 HVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKV  529 (1015)
Q Consensus       450 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~  529 (1015)
                      +.+++++|+++|++.+-..                    .....+..+.|++|.|+..++.+++++|+++|+++      
T Consensus       161 ~~eIVk~Lls~Ga~~~n~~--------------------~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADI------  214 (437)
T PHA02795        161 ESSVVEFILNCGIPDENDV--------------------KLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDI------  214 (437)
T ss_pred             cHHHHHHHHhcCCcccccc--------------------cchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCc------
Confidence            5555555555554221000                    00011223445555555555555555555555554      


Q ss_pred             HHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCC--------HHHHHHHH
Q psy14874        530 CDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ--------LQVCKLLL  601 (1015)
Q Consensus       530 ~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~--------~~iv~~Ll  601 (1015)
                                 |.++..|.||||+|+..|+.++|++|++.+. +++.++..|.||||+|+..|+        .+++++|+
T Consensus       215 -----------N~kD~~G~TpLh~Aa~~g~~eiVelLL~~GA-dIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL  282 (437)
T PHA02795        215 -----------NQLDAGGRTLLYRAIYAGYIDLVSWLLENGA-NVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILL  282 (437)
T ss_pred             -----------CcCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHH
Confidence                       3344455555555555555555555554332 334445555555555555442        34555555


Q ss_pred             HcCC
Q psy14874        602 DLGA  605 (1015)
Q Consensus       602 ~~ga  605 (1015)
                      ++|+
T Consensus       283 ~~ga  286 (437)
T PHA02795        283 REPL  286 (437)
T ss_pred             hCCC
Confidence            5554

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.92  E-value=2.2e-24  Score=219.85  Aligned_cols=177  Identities=16%  Similarity=0.218  Sum_probs=128.0

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhC--CHHHHHHHHhcCCCCcccccccccCchHHHH
Q psy14874        403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYG--HVGIINTLLQKGEKVDVTTNNLACGHVTVVG  480 (1015)
Q Consensus       403 ~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~  480 (1015)
                      ..+.||||.|+..|+.++|+.|++.   ++..+..|.||||+|+..+  +.+++++|+++|++++...            
T Consensus        19 ~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~------------   83 (209)
T PHA02859         19 YRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKT------------   83 (209)
T ss_pred             hccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccC------------
Confidence            4456677777777777777777654   4455666777777776543  6677777777776665431            


Q ss_pred             HHHHhhhhhhhhcCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHH-
Q psy14874        481 LLLSRAADLLQSADKNGKTCLHIAATH---GHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM-  556 (1015)
Q Consensus       481 ~ll~~~~~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~-  556 (1015)
                                   +..|.||||.|+..   ++.+++++|+++|+++                 +.++..|.||||.|+. 
T Consensus        84 -------------~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadi-----------------n~~d~~G~TpLh~a~~~  133 (209)
T PHA02859         84 -------------RDNNLSALHHYLSFNKNVEPEILKILIDSGSSI-----------------TEEDEDGKNLLHMYMCN  133 (209)
T ss_pred             -------------CCCCCCHHHHHHHhCccccHHHHHHHHHCCCCC-----------------CCcCCCCCCHHHHHHHh
Confidence                         23567777776643   3677778777777777                 4456677788887765 


Q ss_pred             -cCcHHHHHHHHhcCCccccccccCCCCHHHH-HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q psy14874        557 -NGYADLCRFLVHDHAAVIDILTLRKQTPLHL-AAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN  625 (1015)
Q Consensus       557 -~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~-A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~  625 (1015)
                       .++.+++++|++.+ .+++.+|..|.||||. |+..++.+++++|+++|++++.+|..|.||+++|+.++
T Consensus       134 ~~~~~~iv~~Li~~g-adin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        134 FNVRINVIKLLIDSG-VSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             ccCCHHHHHHHHHcC-CCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence             35677888887655 4457778889999995 56678999999999999999999999999999998765

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.92  E-value=5.9e-25  Score=269.57  Aligned_cols=108  Identities=18%  Similarity=0.196  Sum_probs=83.2

Q ss_pred             hHHhHHhHHHHHhhhhHHHHHHHHHhccccchhhhhccccc-----------CCchhhHHHhhccccceehhhhHHHHHH
Q psy14874        906 EKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDR-----------RNIEFLDVLIENEQKEVIAHTVVQRYLQ  974 (1015)
Q Consensus       906 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~-----------~~~~~l~~~~~~~~~~~~~~~~~q~~~~  974 (1015)
                      +.|++.|+.+++.+|.+++.++++.++++.|.+.|++..+.           ...-.+.+.+|++||+|||||+||++++
T Consensus       218 ~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a~~~~~~~~~  297 (743)
T TIGR00870       218 ENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQLLS  297 (743)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHhcceeeccCcchHhHh
Confidence            34556678888999999999999999999999888875432           2344577888999999999999999999


Q ss_pred             HHhhcccc-hhhHHHHHHHHHHH----hhhhHHHHHHhcCCCCC
Q psy14874        975 ELWQGSLN-WAAWKTMLLFLTFI----LCPPVWICFTLSLGHKY 1013 (1015)
Q Consensus       975 ~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 1013 (1015)
                      ..|+++++ |.....++.++..+    ..|.++.++.+.+-+++
T Consensus       298 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~p~~~~~~~~~P~~~l  341 (743)
T TIGR00870       298 LYWLEELDGWRRKQSVLELIVVFVIGLKFPELSDMYLIAPLSRL  341 (743)
T ss_pred             hhccccCCcccccccHHHHHHHHHHhhcChHHHHHHHHhhhHHH
Confidence            99999994 76555555555555    45777777665554443

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG4369|consensus

Probab=99.92  E-value=7.3e-26  Score=253.52  Aligned_cols=325  Identities=28%  Similarity=0.373  Sum_probs=225.8

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc-cccccCCCHHHHHHHc
Q psy14874        222 VTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNV-YSKKLGVTALHVAAYF  300 (1015)
Q Consensus       222 ~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~-~~~~~~~t~l~~A~~~  300 (1015)
                      ..-.|+|..||+.|+.|++++|+.+|+++..+|+.|.+||.+|+..|+..+|+.|+.+.++.. .++..+.|+|.+|+..
T Consensus       755 ~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsg  834 (2131)
T KOG4369|consen  755 PNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSG  834 (2131)
T ss_pred             ccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCC
Confidence            345688999999999999999999999999999999999999999999999998888765433 4556677778888888


Q ss_pred             CCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCccccc-ccCCccHHHHHH
Q psy14874        301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQT-QENGYNPLHLAC  379 (1015)
Q Consensus       301 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~-~~~g~tpL~~A~  379 (1015)
                      |+.++++.|+..+...             +.++-...|||..|..-|..++++.|+. .|..++.++ ...|..||+.|.
T Consensus       835 gr~~vvelLl~~gank-------------ehrnvsDytPlsla~Sggy~~iI~~llS-~GseInSrtgSklgisPLmlat  900 (2131)
T KOG4369|consen  835 GRTRVVELLLNAGANK-------------EHRNVSDYTPLSLARSGGYTKIIHALLS-SGSEINSRTGSKLGISPLMLAT  900 (2131)
T ss_pred             CcchHHHHHHHhhccc-------------cccchhhcCchhhhcCcchHHHHHHHhh-cccccccccccccCcchhhhhh
Confidence            8888888887765443             2234456677777777777777777775 466666543 344667777777


Q ss_pred             hCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHh
Q psy14874        380 FGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ  459 (1015)
Q Consensus       380 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  459 (1015)
                      .+|+.+.++.|++.|.+++.....+-+|+|-+|+-.|..+++.+||...+++..+-+.|.|||+-++..|.+++-+.|+.
T Consensus       901 mngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~  980 (2131)
T KOG4369|consen  901 MNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIA  980 (2131)
T ss_pred             hccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhh
Confidence            77777777777777777655566666677777777777777777777777777777777777777777777777777777


Q ss_pred             cCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhcccc
Q psy14874        460 KGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAF  539 (1015)
Q Consensus       460 ~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~  539 (1015)
                      +|+|++....                        ...-.|+|.+++..||...|+.|+...+.+                
T Consensus       981 ~gad~nasPv------------------------p~T~dtalti~a~kGh~kfv~~lln~~atv---------------- 1020 (2131)
T KOG4369|consen  981 AGADTNASPV------------------------PNTWDTALTIPANKGHTKFVPKLLNGDATV---------------- 1020 (2131)
T ss_pred             cccccccCCC------------------------CCcCCccceeecCCCchhhhHHhhCCccce----------------
Confidence            7777665421                        122346666777777777777776655555                


Q ss_pred             ccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHH
Q psy14874        540 INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD  602 (1015)
Q Consensus       540 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~  602 (1015)
                       ..+++.|.|+|.+|+..|+...+..|+++.. +.+..|.+..|+++-|.+.|+++||++...
T Consensus      1021 -~v~NkkG~T~Lwla~~Gg~lss~~il~~~~a-d~d~qdnr~~S~~maafRKgh~~iVk~mv~ 1081 (2131)
T KOG4369|consen 1021 -RVPNKKGCTVLWLASAGGALSSCPILVSSVA-DADQQDNRTNSRTMAAFRKGHFAIVKKMVP 1081 (2131)
T ss_pred             -ecccCCCCcccchhccCCccccchHHhhccc-ChhhhhcccccccHHHHHhchhheeccccC
Confidence             3345566666666666666666666664433 335555566666666666666666665543

>KOG0502|consensus

Probab=99.90  E-value=4.3e-24  Score=199.39  Aligned_cols=236  Identities=25%  Similarity=0.341  Sum_probs=195.6

Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy14874         17 QTSIGWTPLLIACNRGHMELVNTMLNNHAR-VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAA   95 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~   95 (1015)
                      .++.|.+-+-.|.+.|+.+++..+..-..+ ++..+.+|+.+++.|+-.|+.+.+..++.+|+..|..+--+.+|+.+++
T Consensus        58 ~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsV  137 (296)
T KOG0502|consen   58 RNALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSV  137 (296)
T ss_pred             HHhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHH
Confidence            357788888999999999999888886554 3346788999999999999999999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh
Q psy14874         96 MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR  175 (1015)
Q Consensus        96 ~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~  175 (1015)
                      ...+.+.+..+.   ...+|..|..|.|||.+|+..|++++|++|++.|||++...+...++|.+|++.|+.+|+++|++
T Consensus       138 hql~L~~~~~~~---~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~  214 (296)
T KOG0502|consen  138 HQLHLDVVDLLV---NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLT  214 (296)
T ss_pred             HHHHHHHHHHHh---hccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHh
Confidence            999999988876   34689999999999999999999999999999999999988888899999999999999999998


Q ss_pred             cCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q psy14874        176 AHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENK  255 (1015)
Q Consensus       176 ~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~  255 (1015)
                      .+.+ ++..|-+                                    |.|||.+|++.|+.++++.|+..|++++..+.
T Consensus       215 r~vd-VNvyDwN------------------------------------GgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~d  257 (296)
T KOG0502|consen  215 REVD-VNVYDWN------------------------------------GGTPLLYAVRGNHVKCVESLLNSGADVTQEDD  257 (296)
T ss_pred             cCCC-cceeccC------------------------------------CCceeeeeecCChHHHHHHHHhcCCCcccccc
Confidence            8776 3444444                                    44666677777788888888888888888888


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCH
Q psy14874        256 TGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTA  293 (1015)
Q Consensus       256 ~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~  293 (1015)
                      .|++++..|+..|+- +|+..+++.......+....+|
T Consensus       258 sGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~  294 (296)
T KOG0502|consen  258 SGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTP  294 (296)
T ss_pred             cCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCC
Confidence            888888888888877 6666666554444444333333

>KOG0502|consensus

Probab=99.90  E-value=8.9e-24  Score=197.32  Aligned_cols=221  Identities=24%  Similarity=0.352  Sum_probs=195.1

Q ss_pred             cCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHh
Q psy14874        369 ENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARY  448 (1015)
Q Consensus       369 ~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~  448 (1015)
                      ..|..-+..+...++.+++.....-.++-+...+.+|+++++.++-.++...+..++.+|+..|..+.-+.+|+..++..
T Consensus        60 ~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhq  139 (296)
T KOG0502|consen   60 ALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQ  139 (296)
T ss_pred             hcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHH
Confidence            44566667788888888888887777776777888899999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhh
Q psy14874        449 GHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK  528 (1015)
Q Consensus       449 g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~  528 (1015)
                      .+.+.+..+.++-                            ++..|+.|.|||..|+..|++++|++||+.|++++... 
T Consensus       140 l~L~~~~~~~~n~----------------------------VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lg-  190 (296)
T KOG0502|consen  140 LHLDVVDLLVNNK----------------------------VNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALG-  190 (296)
T ss_pred             HHHHHHHHHhhcc----------------------------ccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhh-
Confidence            8888877776653                            34558999999999999999999999999999997644 


Q ss_pred             HHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy14874        529 VCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID  608 (1015)
Q Consensus       529 ~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~  608 (1015)
                                      +...++|.+|+..|+.++|++|++.+. ++|..|.+|-|||.+|++.|+.++|+.|+..|++++
T Consensus       191 ----------------k~resALsLAt~ggytdiV~lLL~r~v-dVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t  253 (296)
T KOG0502|consen  191 ----------------KYRESALSLATRGGYTDIVELLLTREV-DVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVT  253 (296)
T ss_pred             ----------------hhhhhhHhHHhcCChHHHHHHHHhcCC-CcceeccCCCceeeeeecCChHHHHHHHHhcCCCcc
Confidence                            356789999999999999999997655 469999999999999999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHhcCChHHHHHHHHh
Q psy14874        609 ATDDQGQKPIHVAAQNNFPEVAQIFLRA  636 (1015)
Q Consensus       609 ~~d~~g~t~l~~A~~~~~~~~~~~ll~~  636 (1015)
                      ..|..|.+++..|+..|+. +|+..++.
T Consensus       254 ~e~dsGy~~mdlAValGyr-~Vqqvie~  280 (296)
T KOG0502|consen  254 QEDDSGYWIMDLAVALGYR-IVQQVIEK  280 (296)
T ss_pred             cccccCCcHHHHHHHhhhH-HHHHHHHH
Confidence            9999999999999999998 77766664

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.88  E-value=8.5e-22  Score=242.49  Aligned_cols=176  Identities=25%  Similarity=0.354  Sum_probs=158.9

Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874         17 QTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM   96 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~   96 (1015)
                      .+..+.++||.||..|+.++++.|+++|+++|..|.+|+||||+|+..|+.+++++|+++|+++|.+|.+|.||||.|+.
T Consensus       521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~  600 (823)
T PLN03192        521 DDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS  600 (823)
T ss_pred             CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHH
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874         97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      .|+.+++++|++ .+...+  ...+.++||.|+.+|+.++++.|+++|+|+|.+|.+|.||||+|+..|+.+++++|+++
T Consensus       601 ~g~~~iv~~L~~-~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~  677 (823)
T PLN03192        601 AKHHKIFRILYH-FASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMN  677 (823)
T ss_pred             hCCHHHHHHHHh-cCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHc
Confidence            999999999995 343333  34577999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccCCCCC-chHHHHHH
Q psy14874        177 HPSLVTATTKDG-NTCAHIAA  196 (1015)
Q Consensus       177 ~~~~~~~~~~~g-~t~L~~A~  196 (1015)
                      +++ ++..+..| .+|.+.+.
T Consensus       678 GAd-v~~~~~~g~~t~~~l~~  697 (823)
T PLN03192        678 GAD-VDKANTDDDFSPTELRE  697 (823)
T ss_pred             CCC-CCCCCCCCCCCHHHHHH
Confidence            987 56666666 77776653

>KOG0507|consensus

Probab=99.88  E-value=3.4e-22  Score=219.45  Aligned_cols=236  Identities=27%  Similarity=0.374  Sum_probs=175.7

Q ss_pred             cHHHHHHhcCCHHHHHHHHhCC-------------CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q psy14874         23 TPLLIACNRGHMELVNTMLNNH-------------ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRT   89 (1015)
Q Consensus        23 t~L~~A~~~g~~~iv~~Ll~~g-------------~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t   89 (1015)
                      +=|..||+.|+.+.|..|++.-             .++|..|.+|.|+||.|+.+|+.+++++|+++.+-++..+..|.+
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~   84 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGIL   84 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcc
Confidence            4467899999999999999841             346777889999999999999999999999999999998999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHH
Q psy14874         90 ALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEV  169 (1015)
Q Consensus        90 ~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~i  169 (1015)
                      |||+|+..|+.|+++.|+.. +..+|..+..|.||||.|++.|+.+++.+|+++|+|+-..++.+.|++..|++.|..++
T Consensus        85 plhlaaw~g~~e~vkmll~q-~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~V  163 (854)
T KOG0507|consen   85 PLHLAAWNGNLEIVKMLLLQ-TDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEV  163 (854)
T ss_pred             eEEehhhcCcchHHHHHHhc-ccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHH
Confidence            99999999999999999954 57789999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCC-------cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHH
Q psy14874        170 AQIFLRAHPSL-------VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV  242 (1015)
Q Consensus       170 v~~Ll~~~~~~-------~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~  242 (1015)
                      ++.|++..-..       ...++..+.+|+|.|+++|+.++++.|++.+.+......    ..|+||.|+.+|..++|.+
T Consensus       164 vq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~----~gtalheaalcgk~evvr~  239 (854)
T KOG0507|consen  164 VQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTE----DGTALHEAALCGKAEVVRF  239 (854)
T ss_pred             HHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccc----cchhhhhHhhcCcchhhhH
Confidence            99998861110       112223344445555555555555555544333222211    1145555555555555555


Q ss_pred             HHHcCCCCCCCCCCCCCHHHH
Q psy14874        243 LVKAGASCTDENKTGFTAVHL  263 (1015)
Q Consensus       243 Ll~~ga~~~~~~~~~~t~L~~  263 (1015)
                      |++.|.+...++.+|.|+|.+
T Consensus       240 ll~~gin~h~~n~~~qtaldi  260 (854)
T KOG0507|consen  240 LLEIGINTHIKNQHGQTALDI  260 (854)
T ss_pred             HHhhccccccccccchHHHHH
Confidence            555555544455455544443

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.86  E-value=8.9e-21  Score=233.52  Aligned_cols=179  Identities=22%  Similarity=0.269  Sum_probs=158.6

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHH
Q psy14874        401 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVG  480 (1015)
Q Consensus       401 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~  480 (1015)
                      .+..+.++|+.|+..|+.++++.|+++|+++|..|..|.||||+|+..|+.++++.|+++|++++..             
T Consensus       521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~-------------  587 (823)
T PLN03192        521 DDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIR-------------  587 (823)
T ss_pred             CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCc-------------
Confidence            3445678999999999999999999999999999999999999999999999999999999988754             


Q ss_pred             HHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcH
Q psy14874        481 LLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA  560 (1015)
Q Consensus       481 ~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~  560 (1015)
                                   |.+|.||||.|+..|+.+++++|++.++..+                   ...|.++||.|+.+|+.
T Consensus       588 -------------d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~-------------------~~~~~~~L~~Aa~~g~~  635 (823)
T PLN03192        588 -------------DANGNTALWNAISAKHHKIFRILYHFASISD-------------------PHAAGDLLCTAAKRNDL  635 (823)
T ss_pred             -------------CCCCCCHHHHHHHhCCHHHHHHHHhcCcccC-------------------cccCchHHHHHHHhCCH
Confidence                         7889999999999999999999998776542                   23467899999999999


Q ss_pred             HHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC-CCHHHHHHhcC
Q psy14874        561 DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG-QKPIHVAAQNN  625 (1015)
Q Consensus       561 ~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g-~t~l~~A~~~~  625 (1015)
                      +++++|++++. +++..|.+|.||||.|+..|+.+++++|+++|++++..|..| .||..++....
T Consensus       636 ~~v~~Ll~~Ga-din~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~  700 (823)
T PLN03192        636 TAMKELLKQGL-NVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQ  700 (823)
T ss_pred             HHHHHHHHCCC-CCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHH
Confidence            99999997655 568899999999999999999999999999999999999988 89988775433

>KOG0507|consensus

Probab=99.86  E-value=2.4e-21  Score=212.81  Aligned_cols=243  Identities=27%  Similarity=0.347  Sum_probs=213.6

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCC-------------CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCC
Q psy14874         56 SALHLAAEHGYLKVCDALLTHKA-------------FINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ  122 (1015)
Q Consensus        56 t~L~~A~~~g~~~iv~~Ll~~ga-------------~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~  122 (1015)
                      +-+.-|++.|+.+.+..|++..-             .+|..|.+|-|+||.||.+|+.+++++|+ ++.+.++..+..|.
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~lll-e~ea~ldl~d~kg~   83 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLL-DYEALLDLCDTKGI   83 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHh-cchhhhhhhhccCc
Confidence            45777999999999999997522             36677889999999999999999999999 56778899999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHH
Q psy14874        123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVG  202 (1015)
Q Consensus       123 t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~  202 (1015)
                      +|||+|+.+|+.+++|.|+.++..+|..+..|.||||.|++.|+.+++.+|++++.+ ....+..+.|++..|++.|..+
T Consensus        84 ~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~ad-p~i~nns~~t~ldlA~qfgr~~  162 (854)
T KOG0507|consen   84 LPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNAD-PFIRNNSKETVLDLASRFGRAE  162 (854)
T ss_pred             ceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCC-ccccCcccccHHHHHHHhhhhH
Confidence            999999999999999999999999999999999999999999999999999999988 5678899999999999999999


Q ss_pred             HHHHHHhcCCcccc-----cccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy14874        203 VIEELMKFDRSGVI-----SARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMR  277 (1015)
Q Consensus       203 iv~~Ll~~~~~~~~-----~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll  277 (1015)
                      +++.|+...-....     .......+.+|+|.|+++|+.++++.|++.|.++|....+| |+||.|+..|..++|.+|+
T Consensus       163 Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll  241 (854)
T KOG0507|consen  163 VVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLL  241 (854)
T ss_pred             HHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHH
Confidence            99999975211111     12234456789999999999999999999999999876654 8999999999999999999


Q ss_pred             hCCCccccccccCCCHHHHHHHcC
Q psy14874        278 SSKALNVYSKKLGVTALHVAAYFG  301 (1015)
Q Consensus       278 ~~~~~~~~~~~~~~t~l~~A~~~~  301 (1015)
                      +.|......+..|.|++.+-....
T Consensus       242 ~~gin~h~~n~~~qtaldil~d~~  265 (854)
T KOG0507|consen  242 EIGINTHIKNQHGQTALDIIIDLQ  265 (854)
T ss_pred             hhccccccccccchHHHHHHHhcc
Confidence            999888888899999987766543

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.85  E-value=7.8e-21  Score=186.23  Aligned_cols=142  Identities=20%  Similarity=0.287  Sum_probs=128.6

Q ss_pred             hccCCCCCCcHHHHHHhcCCH----HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH---HHHHHhCCCCCCCCC-C
Q psy14874         14 LNKQTSIGWTPLLIACNRGHM----ELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKV---CDALLTHKAFINSKS-R   85 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~----~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~i---v~~Ll~~ga~in~~~-~   85 (1015)
                      ++..++++.++||.||+.|+.    +++++|.+.|++++..|..|+||||+|+..|+.++   +++|+++|+++|.++ .
T Consensus        13 ~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~   92 (166)
T PHA02743         13 AVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELG   92 (166)
T ss_pred             HhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCC
Confidence            456778899999999999998    67778889999999899999999999999988654   899999999999998 5


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q psy14874         86 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQ  155 (1015)
Q Consensus        86 ~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~  155 (1015)
                      .|.||||+|+..|+.+++++|+++.+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus        93 ~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743         93 TGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence            8999999999999999999999667889999999999999999999999999999999999998887764

>KOG3676|consensus

Probab=99.85  E-value=5.8e-20  Score=205.47  Aligned_cols=364  Identities=21%  Similarity=0.231  Sum_probs=235.5

Q ss_pred             cHHHHHHHcCCHHHHHHHhhCC---------CCcccCCCCCCCHHHHHHHh---CCHHHHHHHHhcCCCCcccccccccC
Q psy14874        407 TCLHIAATHGHLQMVEVLLGQG---------AEINATDKGGARSIHTAARY---GHVGIINTLLQKGEKVDVTTNNLACG  474 (1015)
Q Consensus       407 t~L~~A~~~g~~~iv~~Ll~~g---------a~i~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~~~  474 (1015)
                      .++..|...+..+..+-|+..+         -+++.+-.-|+|.||.|..+   ++.++++.|++.-...          
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~l----------  172 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKL----------  172 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHH----------
Confidence            4555666666666655555543         45666667788888888763   4456777777653211          


Q ss_pred             chHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHh------hhhccccccccCCCCC
Q psy14874        475 HVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA------LLTHKAFINSKSRVGR  548 (1015)
Q Consensus       475 ~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~------ll~~~~~~~~~~~~g~  548 (1015)
                                 ..++.......|.||||+|+.+.+.++|++|++.|||++++..-.=.      -.....+....-..|+
T Consensus       173 -----------ind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGE  241 (782)
T KOG3676|consen  173 -----------INDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGE  241 (782)
T ss_pred             -----------hhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeecc
Confidence                       00111223468999999999999999999999999999886420000      0001111111123588


Q ss_pred             cHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHhcCC
Q psy14874        549 TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS--IDATDDQGQKPIHVAAQNNF  626 (1015)
Q Consensus       549 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~--~~~~d~~g~t~l~~A~~~~~  626 (1015)
                      .||.+||.-++.|+|++|++ .+.+++.+|..|+|.||.-+..-..++..+++++|++  ...++..|-|||.+|++.|+
T Consensus       242 yPLSfAAC~nq~eivrlLl~-~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk  320 (782)
T KOG3676|consen  242 YPLSFAACTNQPEIVRLLLA-HGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGK  320 (782)
T ss_pred             CchHHHHHcCCHHHHHHHHh-cCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhh
Confidence            99999999999999999998 6677899999999999999999999999999999999  99999999999999999999


Q ss_pred             hHHHHHHHHhCCccccccchhhhhHHHHHHhcccchhhHHHHHHHHcCCCcccccccccccCCchHHHHHH---HhhhhH
Q psy14874        627 PEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLI---ENEQKE  703 (1015)
Q Consensus       627 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~ll~~~~~~~e~~~il~~~~~~~~~~L~~ai---~~~~k~  703 (1015)
                      .+|.+.+++........-.+-....-++.                     +++++     .+.-+.|...+   +.++.+
T Consensus       321 ~emf~~ile~~k~~~W~YGpvtsslYpL~---------------------~iDT~-----~n~~SvLeivvyg~~~eHl~  374 (782)
T KOG3676|consen  321 KEMFQHILERRKFTDWAYGPVTSSLYPLN---------------------SIDTI-----GNENSVLEIVVYGIKNEHLE  374 (782)
T ss_pred             HHHHHHHHHhhcccceeecccccccccch---------------------hcccc-----cchhhhhhhhhcCCcHHHHH
Confidence            99999999874222211111111111111                     01111     02223333333   334555


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhccCchhhHhhhc-cCCccCCchhHHHHHhhhcHHHHHHHHHHhhcc
Q psy14874        704 VIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLS-LGHKYNKVPIIKFMSYLTSHMYLMFLLMLVGIT  782 (1015)
Q Consensus       704 fvah~~~q~~L~~~w~~~~~~~~~~~l~~~~~~~l~~~~~i~~~~~-~~~~~~~~P~~~f~~~~~s~~~fl~L~~~~~~~  782 (1015)
                      .+-+ .++++|+.||..+.+..++..++++++++++.+....+... ..    ..|.                       
T Consensus       375 Ll~~-~i~~LL~~KW~~f~k~~f~~~~~~~~~y~i~ft~~~y~RP~~~~----~~~~-----------------------  426 (782)
T KOG3676|consen  375 LLDG-PIEELLEDKWKAFGKKQFFMSLLIYLLYMICFTLAFYYRPALEQ----AKLL-----------------------  426 (782)
T ss_pred             HHhH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhcccccc----ccch-----------------------
Confidence            5555 78999999999988887778777777777766665555542 11    1110                       


Q ss_pred             cCcccccCCC--CcchHHHHHHHHHHHHHHhhhcCCCCCCCchHHHHH-----HHHHHHhhhhhhhhhhhhhh
Q psy14874        783 PIYPVVRPNL--VPYWYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLA-----VLLFGIFGVALHLLEYTFIL  848 (1015)
Q Consensus       783 ~~~~~~~~~~--~p~~~e~~~~~~v~gl~~~e~~~~~~~~~~~~~~~~-----wn~~~~~~~~~~~~~~~~~~  848 (1015)
                        ......++  .+..-|.+.++|.+-++..|+...+.++...|.+.+     +.++.+....+.+++...++
T Consensus       427 --~~~~~~~~~~~r~~~e~~~l~~~~~~~~~~~~~if~~~~~~~~~~~~~~~~~~v~~~~~~~l~l~~~~~~i  497 (782)
T KOG3676|consen  427 --DEAYINDYDELRLAGETLTLLGGILFLFCELPDIFLQGLPAYNGQLIDGPLFHVLGFLQAVLVLVSPVLRL  497 (782)
T ss_pred             --hhccccCchhhhhhhhHHHhhhhHhhhhhhhHhHHhcccHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH
Confidence              00001111  344556666778777788888887777776665443     34444444444444444443

>PHA02741 hypothetical protein; Provisional

Probab=99.85  E-value=1.1e-20  Score=186.35  Aligned_cols=139  Identities=23%  Similarity=0.340  Sum_probs=124.2

Q ss_pred             hhHhhccCCCCCCcHHHHHHhcCCHHHHHHHHh------CCCCCCCCCCCCCcHHHHHHHcCC----HHHHHHHHhCCCC
Q psy14874         10 ISKALNKQTSIGWTPLLIACNRGHMELVNTMLN------NHARVDVFDQEGRSALHLAAEHGY----LKVCDALLTHKAF   79 (1015)
Q Consensus        10 ~~~~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~------~g~~~~~~d~~g~t~L~~A~~~g~----~~iv~~Ll~~ga~   79 (1015)
                      +.+.++.+|+.|.||||.|++.|+.++|+.|++      .|++++.+|..|+||||+|+..|+    .+++++|+++|++
T Consensus        10 ~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad   89 (169)
T PHA02741         10 LEEMIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD   89 (169)
T ss_pred             HHHHhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC
Confidence            344578999999999999999999999999854      367889999999999999999998    5899999999999


Q ss_pred             CCCCCC-CCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy14874         80 INSKSR-VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID  148 (1015)
Q Consensus        80 in~~~~-~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n  148 (1015)
                      +|.++. .|.||||+|+..++.+++++|+...+.+++..+..|+||||+|+..|+.+++++|++.++...
T Consensus        90 in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~~  159 (169)
T PHA02741         90 INAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATSR  159 (169)
T ss_pred             CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHhc
Confidence            999885 899999999999999999999965678889999999999999999999999999999876643

>KOG0514|consensus

Probab=99.83  E-value=2.4e-20  Score=187.74  Aligned_cols=159  Identities=27%  Similarity=0.385  Sum_probs=95.3

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHc-----CCHHHHHHHHhccCcccccc-ccCCC
Q psy14874         50 FDQEGRSALHLAAEHGYLKVCDALLTHK-AFINSKSRVGRTALHLAAMN-----GYADLCRFLVHDHAAVIDIL-TLRKQ  122 (1015)
Q Consensus        50 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~g-a~in~~~~~g~t~L~~A~~~-----g~~eiv~~Ll~~~~~~i~~~-~~~g~  122 (1015)
                      -|.+|+|+||||+..+|.++|+.||+.| ++++.+++.|.||.++++..     .+.++|.-|..-  .++|.+ ...|+
T Consensus       264 aDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m--gnVNaKAsQ~gQ  341 (452)
T KOG0514|consen  264 ADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM--GDVNAKASQHGQ  341 (452)
T ss_pred             hcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhc--cCcchhhhhhcc
Confidence            3444444444444444444444444443 34444444444444444432     234455555421  123332 34567


Q ss_pred             CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHH
Q psy14874        123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVG  202 (1015)
Q Consensus       123 t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~  202 (1015)
                      |+|++|+..|+.++||.||..|||+|.+|.+|.|+|++|++.||.||+++|+....-+...+|.+|.|+|.+|...|+-|
T Consensus       342 TALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~e  421 (452)
T KOG0514|consen  342 TALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHRE  421 (452)
T ss_pred             hhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchH
Confidence            77777777777777777777777777777777777777777777777777776655556667777777777777777777


Q ss_pred             HHHHHHhc
Q psy14874        203 VIEELMKF  210 (1015)
Q Consensus       203 iv~~Ll~~  210 (1015)
                      +.-.|..+
T Consensus       422 Ia~mlYa~  429 (452)
T KOG0514|consen  422 IAVMLYAH  429 (452)
T ss_pred             HHHHHHHH
Confidence            76666543

>KOG0514|consensus

Probab=99.82  E-value=2.9e-20  Score=187.15  Aligned_cols=172  Identities=28%  Similarity=0.365  Sum_probs=150.7

Q ss_pred             CCCChhHhhHhhccCCCCCCcHHHHHHhcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHc-----CCHHHHHHHHhC
Q psy14874          3 EQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLAAEH-----GYLKVCDALLTH   76 (1015)
Q Consensus         3 ~~~~~~~~~~~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~d~~g~t~L~~A~~~-----g~~~iv~~Ll~~   76 (1015)
                      +-|+..=+.-.+|.-|++|.|+||||+..+|+++|+.|++.| +++|..+.-|.||+++|+..     .+..+|+.|..-
T Consensus       250 ~als~~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m  329 (452)
T KOG0514|consen  250 EALSPPLLEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM  329 (452)
T ss_pred             HhcChHHHHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhc
Confidence            345666666778999999999999999999999999999988 69999999999999999865     367889998887


Q ss_pred             CCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCC
Q psy14874         77 KAFINSK-SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL-GASIDATDDQG  154 (1015)
Q Consensus        77 ga~in~~-~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~-gad~n~~d~~~  154 (1015)
                      | ++|.+ ...|.|+|++|+..|+.|+|+.||. -++++|.+|.+|.|+|+.|++.||.|++|+||.. ++|....|.+|
T Consensus       330 g-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLa-cgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~Dg  407 (452)
T KOG0514|consen  330 G-DVNAKASQHGQTALMLAVSHGRVDMVKALLA-CGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDG  407 (452)
T ss_pred             c-CcchhhhhhcchhhhhhhhcCcHHHHHHHHH-ccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCC
Confidence            6 56765 3469999999999999999999994 5889999999999999999999999999999865 68899999999


Q ss_pred             CcHHHHHHHcCChHHHHHHhhc
Q psy14874        155 QKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus       155 ~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      .|+|.+|...||.||.-+|..+
T Consensus       408 STAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  408 STALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             chhhhhHHhcCchHHHHHHHHH
Confidence            9999999999999999888764

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.82  E-value=5.8e-20  Score=178.77  Aligned_cols=138  Identities=22%  Similarity=0.292  Sum_probs=118.9

Q ss_pred             HhhHhhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCC-------CCCCCCCCCcHHHHHHHcCCH---HHHHHHHhCCC
Q psy14874          9 EISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHAR-------VDVFDQEGRSALHLAAEHGYL---KVCDALLTHKA   78 (1015)
Q Consensus         9 ~~~~~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-------~~~~d~~g~t~L~~A~~~g~~---~iv~~Ll~~ga   78 (1015)
                      +-..+.+++|.+|.||||+||+.|+.  ++++..++..       ++..|.+|+||||+|+..|+.   +++++|+++|+
T Consensus         5 ~~~~~~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~ga   82 (154)
T PHA02736          5 EEIIFASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGA   82 (154)
T ss_pred             chhhHHHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCC
Confidence            34567899999999999999999984  3444333221       334688999999999999987   46899999999


Q ss_pred             CCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy14874         79 FINSKS-RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID  148 (1015)
Q Consensus        79 ~in~~~-~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n  148 (1015)
                      +++.++ ..|.||||+|+..|+.+++++|+...+.+++..+..|.||||+|+..|+.+++++|+++|++.+
T Consensus        83 din~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         83 DINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             CccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            999998 4899999999999999999999976688999999999999999999999999999999999875

>KOG0505|consensus

Probab=99.81  E-value=7.2e-20  Score=195.09  Aligned_cols=220  Identities=32%  Similarity=0.501  Sum_probs=131.2

Q ss_pred             HHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHH
Q psy14874        377 LACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINT  456 (1015)
Q Consensus       377 ~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~  456 (1015)
                      -|+..|..+=+..|+..+.. ++..+.+|.|+||-+|...+.+||++|+++|++||..|..|+||+|.|+..|+..++++
T Consensus        46 ~A~~~~d~~ev~~ll~~ga~-~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~  124 (527)
T KOG0505|consen   46 EACSRGDLEEVRKLLNRGAS-PNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEY  124 (527)
T ss_pred             hccccccHHHHHHHhccCCC-ccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHH
Confidence            34444455555555544444 24455555555555555555555555555555555555555555555555555555555


Q ss_pred             HHhcCCCCccccccc-----ccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcC---CHHHHHHHHhcCCCCcchhh
Q psy14874        457 LLQKGEKVDVTTNNL-----ACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG---HLQMVEVLLGQGAEINATDK  528 (1015)
Q Consensus       457 Ll~~g~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~ga~~~~~~~  528 (1015)
                      |+.+|+++.......     .+.+.....++....       +..|.+ +..+-...   -+.=+...+..|...     
T Consensus       125 li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~-------~r~gi~-iea~R~~~e~~ml~D~~q~l~~G~~~-----  191 (527)
T KOG0505|consen  125 LIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEM-------ARQGID-IEAARKAEEQTMLDDARQWLNAGAEL-----  191 (527)
T ss_pred             HHHhhhhhhhccCCCCCccccccCcchhHHHHHHH-------HHhccc-HHHHhhhhHHHHHHHHHHHHhccccc-----
Confidence            555555443321110     000000000000000       011111 11110000   111123333355554     


Q ss_pred             HHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy14874        529 VCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID  608 (1015)
Q Consensus       529 ~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~  608 (1015)
                                  +.....|-|+||.|+.+|+.++.++|++.+.. ++.+|.+|+||||.|+..|+.+++++|+++|++.+
T Consensus       192 ------------d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~-~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d  258 (527)
T KOG0505|consen  192 ------------DARHARGATALHVAAANGYTEVAALLLQAGYS-VNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMD  258 (527)
T ss_pred             ------------cccccccchHHHHHHhhhHHHHHHHHHHhccC-cccccccCCCcccHHHHhhhHhHHHHHHHhhcccc
Confidence                        44444599999999999999999999977665 58999999999999999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHh
Q psy14874        609 ATDDQGQKPIHVAAQ  623 (1015)
Q Consensus       609 ~~d~~g~t~l~~A~~  623 (1015)
                      .....|.||+..|..
T Consensus       259 ~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  259 AKTKMGETPLDVADE  273 (527)
T ss_pred             hhhhcCCCCccchhh
Confidence            999999999998865

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.81  E-value=5.5e-19  Score=185.86  Aligned_cols=155  Identities=15%  Similarity=0.153  Sum_probs=108.5

Q ss_pred             hccCCCCCCcH-HHHHHhcCCHHHHHHHHhCCCCCCCC----CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC-CCCC
Q psy14874         14 LNKQTSIGWTP-LLIACNRGHMELVNTMLNNHARVDVF----DQEGRSALHLAAEHGYLKVCDALLTHKAFINSK-SRVG   87 (1015)
Q Consensus        14 ~n~~~~~g~t~-L~~A~~~g~~~iv~~Ll~~g~~~~~~----d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~-~~~g   87 (1015)
                      +.++|..|+|+ ||.|++.|+.+++++|+++|+++|.+    +..|.||||+|+..|+.+++++|+++||++|.+ +..|
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g  104 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAK  104 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCC
Confidence            56677777764 44566667788888888888887765    347778888888888888888888888888875 3467


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCh
Q psy14874         88 RTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFP  167 (1015)
Q Consensus        88 ~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~  167 (1015)
                      .||||.|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++..+.  |..   .+..+.+|.+++   ++.
T Consensus       105 ~TpLh~Aa~~~~~eivklLL-~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~---~n~  175 (300)
T PHA02884        105 ITPLYISVLHGCLKCLEILL-SYGADINIQTNDMVTPIELALMICNNFLAFMIC--DNE---ISNFYKHPKKIL---INF  175 (300)
T ss_pred             CCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CCc---ccccccChhhhh---ccH
Confidence            77877777777777777777 456777777777777777777777777665554  222   334455666654   356


Q ss_pred             HHHHHHhhcC
Q psy14874        168 EVAQIFLRAH  177 (1015)
Q Consensus       168 ~iv~~Ll~~~  177 (1015)
                      +++++|+.+.
T Consensus       176 ei~~~Lish~  185 (300)
T PHA02884        176 DILKILVSHF  185 (300)
T ss_pred             HHHHHHHHHH
Confidence            7777776653

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.80  E-value=3.7e-19  Score=174.38  Aligned_cols=145  Identities=19%  Similarity=0.225  Sum_probs=128.7

Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCCH----HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH---HHHHHhccCcccc
Q psy14874         43 NHARVDVFDQEGRSALHLAAEHGYL----KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADL---CRFLVHDHAAVID  115 (1015)
Q Consensus        43 ~g~~~~~~d~~g~t~L~~A~~~g~~----~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~ei---v~~Ll~~~~~~i~  115 (1015)
                      +|++++..+.++.+++|.|++.|+.    +++++|++.|++++.+|..|+||||+|+..|+.+.   +++|+ ..+++++
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll-~~Gadin   87 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLV-NMGADIN   87 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHH-HcCCCCC
Confidence            5677887888899999999999998    77778899999999999999999999999998664   78998 5688999


Q ss_pred             ccc-cCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCc
Q psy14874        116 ILT-LRKQTPLHLAAEAGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGN  189 (1015)
Q Consensus       116 ~~~-~~g~t~L~~Aa~~g~~~ivk~Ll~-~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~  189 (1015)
                      .++ ..|.||||+|+..|+.+++++|++ .|++++.++..|.||||+|+..++.+++++|++++.+ .+.++..|.
T Consensus        88 ~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~-~~~~~~~~~  162 (166)
T PHA02743         88 ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAV-CDDPLSIGL  162 (166)
T ss_pred             CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcccCCc
Confidence            988 589999999999999999999995 8999999999999999999999999999999999877 455555543

>KOG0505|consensus

Probab=99.79  E-value=4.4e-19  Score=189.13  Aligned_cols=228  Identities=26%  Similarity=0.312  Sum_probs=156.6

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHH
Q psy14874         57 ALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQV  136 (1015)
Q Consensus        57 ~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~i  136 (1015)
                      .+.-|+..|..+=|+.|+..|+.++..+.+|.|+||-||...+.++|++|+ .+++++|..|..|+||||.|+..|+.++
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~-e~ga~Vn~~d~e~wtPlhaaascg~~~i  121 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLV-ENGANVNAQDNEGWTPLHAAASCGYLNI  121 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHH-HhcCCccccccccCCcchhhcccccHHH
Confidence            455566777777777777777777777777777777777777777777777 4577777777777777777777777777


Q ss_pred             HHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHH---HHHHhcCCc
Q psy14874        137 CKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVI---EELMKFDRS  213 (1015)
Q Consensus       137 vk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv---~~Ll~~~~~  213 (1015)
                      +++|+++||++...+.+|..|...|...-..+++..-.....          .+ +..+-......++   ...+..+..
T Consensus       122 ~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~g----------i~-iea~R~~~e~~ml~D~~q~l~~G~~  190 (527)
T KOG0505|consen  122 VEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQG----------ID-IEAARKAEEQTMLDDARQWLNAGAE  190 (527)
T ss_pred             HHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhc----------cc-HHHHhhhhHHHHHHHHHHHHhcccc
Confidence            777777777777777777777776655444444433322211          11 1111111111111   122222222


Q ss_pred             ccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCH
Q psy14874        214 GVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTA  293 (1015)
Q Consensus       214 ~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~  293 (1015)
                         .......|.|.||.|+.+|+.++.++|++.|.+++..|.+|+||||.|+..|..++.+.|+++++........|.+|
T Consensus       191 ---~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p  267 (527)
T KOG0505|consen  191 ---LDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETP  267 (527)
T ss_pred             ---ccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCC
Confidence               22233347888888888888888888888888888888888888888888888888888888888877777788888


Q ss_pred             HHHHHH
Q psy14874        294 LHVAAY  299 (1015)
Q Consensus       294 l~~A~~  299 (1015)
                      +..|..
T Consensus       268 ~dv~de  273 (527)
T KOG0505|consen  268 LDVADE  273 (527)
T ss_pred             ccchhh
Confidence            877654

>PHA02741 hypothetical protein; Provisional

Probab=99.78  E-value=2.6e-18  Score=169.46  Aligned_cols=131  Identities=23%  Similarity=0.326  Sum_probs=113.5

Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHh------CCCCCCCCCCCCCcHHHHHHHcCC----HHHHHHHHhccCcccccc
Q psy14874         48 DVFDQEGRSALHLAAEHGYLKVCDALLT------HKAFINSKSRVGRTALHLAAMNGY----ADLCRFLVHDHAAVIDIL  117 (1015)
Q Consensus        48 ~~~d~~g~t~L~~A~~~g~~~iv~~Ll~------~ga~in~~~~~g~t~L~~A~~~g~----~eiv~~Ll~~~~~~i~~~  117 (1015)
                      +..|..|.||||+|++.|+.++++.|++      .|++++.+|..|.||||+|+..|+    .+++++|++ .+++++.+
T Consensus        15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~-~gadin~~   93 (169)
T PHA02741         15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIE-LGADINAQ   93 (169)
T ss_pred             hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHH-cCCCCCCC
Confidence            3467889999999999999999998853      368889999999999999999998    588899884 67888888


Q ss_pred             cc-CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874        118 TL-RKQTPLHLAAEAGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       118 ~~-~g~t~L~~Aa~~g~~~ivk~Ll~-~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~  179 (1015)
                      +. .|+||||+|+..++.+++++|++ .|++++..|.+|.||||+|+..|+.+++++|++.+..
T Consensus        94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741         94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            75 89999999999999999999997 5999999999999999999999999999999886544

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.77  E-value=6.3e-18  Score=177.86  Aligned_cols=151  Identities=19%  Similarity=0.155  Sum_probs=124.2

Q ss_pred             CCCCCCC-cHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCCcHHHHHHHcCCHHHHHHHHhccCcccccc-ccCCC
Q psy14874         49 VFDQEGR-SALHLAAEHGYLKVCDALLTHKAFINSK----SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL-TLRKQ  122 (1015)
Q Consensus        49 ~~d~~g~-t~L~~A~~~g~~~iv~~Ll~~ga~in~~----~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~-~~~g~  122 (1015)
                      .+|..|+ ++||.|++.|+.+++++|+++|+++|.+    +..|.||||+|+..|+.+++++|+ .+|++++.. +..|.
T Consensus        27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL-~~GADVN~~~~~~g~  105 (300)
T PHA02884         27 KKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLI-RYGADVNRYAEEAKI  105 (300)
T ss_pred             ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCcCcccCCCCC
Confidence            3566666 4677778889999999999999999987    458999999999999999999999 468899986 46799


Q ss_pred             CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHH
Q psy14874        123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVG  202 (1015)
Q Consensus       123 t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~  202 (1015)
                      ||||.|+..|+.+++++|+++|++++.+|..|.||||+|++.++.+++..+....      .+..+.+|.+++   ++.+
T Consensus       106 TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---~n~e  176 (300)
T PHA02884        106 TPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDNE------ISNFYKHPKKIL---INFD  176 (300)
T ss_pred             CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCCc------ccccccChhhhh---ccHH
Confidence            9999999999999999999999999999999999999999999988876665321      344455555543   2455


Q ss_pred             HHHHHHh
Q psy14874        203 VIEELMK  209 (1015)
Q Consensus       203 iv~~Ll~  209 (1015)
                      +++.|+.
T Consensus       177 i~~~Lis  183 (300)
T PHA02884        177 ILKILVS  183 (300)
T ss_pred             HHHHHHH
Confidence            5555554

>KOG0512|consensus

Probab=99.75  E-value=1.2e-17  Score=150.76  Aligned_cols=141  Identities=28%  Similarity=0.324  Sum_probs=88.5

Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy14874         24 PLLIACNRGHMELVNTMLNNHAR-VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADL  102 (1015)
Q Consensus        24 ~L~~A~~~g~~~iv~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~ei  102 (1015)
                      .+..|+..+.+..|+.|++..++ +|.+|.+|.||||.|+.+|+.+||+.|+..||+.++++..|+||||.||.-++.++
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~v  145 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEV  145 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhH
Confidence            35556666666666666665553 66666666666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHhccCccccccccCCCCHHHHHHHcCC-HHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcC
Q psy14874        103 CRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ-LQVCKLLL-DLGASIDATDDQGQKPIHVAAQNN  165 (1015)
Q Consensus       103 v~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~-~~ivk~Ll-~~gad~n~~d~~~~t~L~~A~~~g  165 (1015)
                      +.+|| ++++++|+......||||+||...+ ...+.+|+ +.+.++..++..+.||+.+|-+.+
T Consensus       146 a~~LL-qhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  146 AGRLL-QHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             HHHHH-hccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            66666 4566666666666666666665443 33444443 334555555556666666665544

>KOG0512|consensus

Probab=99.73  E-value=2.6e-17  Score=148.54  Aligned_cols=142  Identities=29%  Similarity=0.288  Sum_probs=121.6

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHH
Q psy14874         57 ALHLAAEHGYLKVCDALLTHKAF-INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQ  135 (1015)
Q Consensus        57 ~L~~A~~~g~~~iv~~Ll~~ga~-in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~  135 (1015)
                      .+.+|+..|....|+.|++..++ +|.+|.+|.||||.|+.+||.+||+.|+ .++++.+.+...|+||||-||.-++.+
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll-~~gAn~~a~T~~GWTPLhSAckWnN~~  144 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELL-LSGANKEAKTNEGWTPLHSACKWNNFE  144 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHH-HccCCcccccccCccchhhhhcccchh
Confidence            56789999999999999998887 8999999999999999999999999999 578888999999999999999999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCh-HHHHHHhhcCCCCcccCCCCCchHHHHHHHcC
Q psy14874        136 VCKLLLDLGASIDATDDQGQKPIHVAAQNNFP-EVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG  199 (1015)
Q Consensus       136 ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~-~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g  199 (1015)
                      ++-.|+++|+|+|.......||||+|+...+. ..+++|+....-....+...+.||+.+|-+.+
T Consensus       145 va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  145 VAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             HHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            99999999999999999999999999977554 56677776544445556777788888876654

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.72  E-value=2.8e-17  Score=159.93  Aligned_cols=101  Identities=27%  Similarity=0.460  Sum_probs=87.9

Q ss_pred             hhcCCCCCcHHHHHHHcCCH---HHHHHHHhcCCCCcchhhHHHhhhhccccccccC-CCCCcHHHHHHHcCcHHHHHHH
Q psy14874        491 QSADKNGKTCLHIAATHGHL---QMVEVLLGQGAEINATDKVCDALLTHKAFINSKS-RVGRTALHLAAMNGYADLCRFL  566 (1015)
Q Consensus       491 ~~~~~~g~t~L~~A~~~g~~---~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~L  566 (1015)
                      ...|..|.||||+|+..|+.   +++++|++.|+++                 +.++ ..|+||||+|+..|+.+++++|
T Consensus        49 ~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi-----------------n~~~~~~g~T~Lh~A~~~~~~~i~~~L  111 (154)
T PHA02736         49 LEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI-----------------NGKERVFGNTPLHIAVYTQNYELATWL  111 (154)
T ss_pred             HHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCc-----------------cccCCCCCCcHHHHHHHhCCHHHHHHH
Confidence            34578999999999999986   4688999999988                 4455 4799999999999999999999


Q ss_pred             HhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy14874        567 VHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID  608 (1015)
Q Consensus       567 l~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~  608 (1015)
                      ++..+.+++..+..|+||||+|+..|+.+++++|+++|++.+
T Consensus       112 l~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736        112 CNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             HhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            976667778889999999999999999999999999998865

>KOG0195|consensus

Probab=99.71  E-value=3.4e-17  Score=159.50  Aligned_cols=114  Identities=34%  Similarity=0.526  Sum_probs=56.8

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL   93 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~   93 (1015)
                      +|..|..|.+|||+||+.||..+|+.|+++|+.+|..+....||||+|+..|+.+||+.|++..+|+|..++.|.|||||
T Consensus        27 ln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhy  106 (448)
T KOG0195|consen   27 LNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHY  106 (448)
T ss_pred             cccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhh
Confidence            44444555555555555555555555555555555444444455555555555555555555555555555555555555


Q ss_pred             HHHcCCHHHHHHHHhccCccccccccCCCCHHHHH
Q psy14874         94 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLA  128 (1015)
Q Consensus        94 A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~A  128 (1015)
                      ||.-|+..+.+-|+ ..|+.++..++.|.|||..|
T Consensus       107 acfwgydqiaedli-~~ga~v~icnk~g~tpldka  140 (448)
T KOG0195|consen  107 ACFWGYDQIAEDLI-SCGAAVNICNKKGMTPLDKA  140 (448)
T ss_pred             hhhhcHHHHHHHHH-hccceeeecccCCCCchhhh
Confidence            55555544544444 23444444444555554443

>KOG0195|consensus

Probab=99.67  E-value=6.7e-17  Score=157.49  Aligned_cols=133  Identities=31%  Similarity=0.450  Sum_probs=119.8

Q ss_pred             HhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14874         29 CNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV  107 (1015)
Q Consensus        29 ~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll  107 (1015)
                      |+.|+.=-|+.-++. .-+.|.-|..|.+|||+|++.|+..+|+.|+..|+.+|..+....||||+|+..||-++|+.|+
T Consensus         8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll   87 (448)
T KOG0195|consen    8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLL   87 (448)
T ss_pred             hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHH
Confidence            555554444544443 3578888999999999999999999999999999999999998999999999999999999999


Q ss_pred             hccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy14874        108 HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAA  162 (1015)
Q Consensus       108 ~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~  162 (1015)
                       ++.+++|..+..|.||||+||.-|+..+.+-|+..||-++..+++|.|||..|-
T Consensus        88 -~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   88 -SRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             -HHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence             568899999999999999999999999999999999999999999999999874

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.64  E-value=3.3e-15  Score=140.19  Aligned_cols=125  Identities=43%  Similarity=0.670  Sum_probs=97.9

Q ss_pred             cCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy14874         16 KQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAA   95 (1015)
Q Consensus        16 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~   95 (1015)
                      .+|.+|.||||.|++.|+.+++++|+++|.+.+..+..|.+|+|.|+..++.+++++|++.|++++..+..|.||+|.|+
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~   81 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAA   81 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence            45677888888888888888888888888877778888888888888888888888888888777777777778888888


Q ss_pred             HcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHH
Q psy14874         96 MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL  141 (1015)
Q Consensus        96 ~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll  141 (1015)
                      ..++.+++++|++ .+..++..+..|.||++.|...++.+++++|+
T Consensus        82 ~~~~~~~~~~L~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          82 RNGNLDVVKLLLK-HGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            8887777777774 34555666666777777777777777777653

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.62  E-value=2.6e-15  Score=130.93  Aligned_cols=87  Identities=40%  Similarity=0.649  Sum_probs=54.8

Q ss_pred             HHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q psy14874         25 LLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCR  104 (1015)
Q Consensus        25 L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~  104 (1015)
                      ||.||+.|+.+++++|++.+.+++.    |+||||+|+..|+.+++++|+++|++++.++..|.||||+|+.+|+.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            5667777777777777776666553    566777777777777777777766666666666666666666666666666


Q ss_pred             HHHhccCccccc
Q psy14874        105 FLVHDHAAVIDI  116 (1015)
Q Consensus       105 ~Ll~~~~~~i~~  116 (1015)
                      +|++ ++.+++.
T Consensus        77 ~Ll~-~g~~~~~   87 (89)
T PF12796_consen   77 LLLE-HGADVNI   87 (89)
T ss_dssp             HHHH-TTT-TTS
T ss_pred             HHHH-cCCCCCC
Confidence            6663 3444443

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.61  E-value=4e-15  Score=129.70  Aligned_cols=89  Identities=42%  Similarity=0.605  Sum_probs=77.0

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHH
Q psy14874         58 LHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVC  137 (1015)
Q Consensus        58 L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~iv  137 (1015)
                      ||.|++.|+.+++++|++.+.+++.    |+||||+|+..|+.+++++|++ .+.+++..+..|+||||+|+.+|+.+++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~   75 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLE-NGADINSQDKNGNTALHYAAENGNLEIV   75 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHH-TTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHH-hcccccccCCCCCCHHHHHHHcCCHHHH
Confidence            7899999999999999999887776    8889999999999999999994 6778888889999999999999999999


Q ss_pred             HHHHHCCCCCCCCC
Q psy14874        138 KLLLDLGASIDATD  151 (1015)
Q Consensus       138 k~Ll~~gad~n~~d  151 (1015)
                      ++|+++|++++.+|
T Consensus        76 ~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   76 KLLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHHTTT-TTSS-
T ss_pred             HHHHHcCCCCCCcC
Confidence            99999999988764

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.59  E-value=2.6e-14  Score=133.99  Aligned_cols=124  Identities=44%  Similarity=0.685  Sum_probs=113.0

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHH
Q psy14874         50 FDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA  129 (1015)
Q Consensus        50 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa  129 (1015)
                      .|.+|.||||.|+..|+.+++++|++.|.+.+..+..|.||||.|+..++.+++++|++ .+..++..+..|.||+|.|+
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~l~~a~   81 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE-KGADVNARDKDGNTPLHLAA   81 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHH
Confidence            46778999999999999999999999999988889999999999999999999999995 45567778888999999999


Q ss_pred             HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHh
Q psy14874        130 EAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL  174 (1015)
Q Consensus       130 ~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll  174 (1015)
                      ..++.+++++|+++|.+.+..+..+.||+++|+..++.+++++|+
T Consensus        82 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          82 RNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            999999999999999999999999999999999999999998874

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG3676|consensus

Probab=99.58  E-value=1.8e-14  Score=161.93  Aligned_cols=209  Identities=25%  Similarity=0.324  Sum_probs=168.5

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCC---------CCCCCCCCCCCcHHHHHHH---cCCHHHHHHHHhccCcccccc----cc
Q psy14874         56 SALHLAAEHGYLKVCDALLTHK---------AFINSKSRVGRTALHLAAM---NGYADLCRFLVHDHAAVIDIL----TL  119 (1015)
Q Consensus        56 t~L~~A~~~g~~~iv~~Ll~~g---------a~in~~~~~g~t~L~~A~~---~g~~eiv~~Ll~~~~~~i~~~----~~  119 (1015)
                      .++..|...|..+..+-|++.+         -+++.+...|+|.||.|..   .++.++++.|++-.+..+|..    ..
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY  182 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY  182 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence            6777888888888888888766         4577788899999999987   456799999998777665543    34


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh-cCCCCcccCCCCCchHHHHHHHc
Q psy14874        120 RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR-AHPSLVTATTKDGNTCAHIAAMQ  198 (1015)
Q Consensus       120 ~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~-~~~~~~~~~~~~g~t~L~~A~~~  198 (1015)
                      .|+||||+|+.+.+.++|++|++.|||++.+-.            |..     +.. ..+.....++..|          
T Consensus       183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~------------G~F-----F~~~dqk~~rk~T~Y~G----------  235 (782)
T KOG3676|consen  183 YGQSALHIAIVNRDAELVRLLLAAGADVHARAC------------GAF-----FCPDDQKASRKSTNYTG----------  235 (782)
T ss_pred             cCcchHHHHHHhccHHHHHHHHHcCCchhhHhh------------ccc-----cCcccccccccccCCcc----------
Confidence            699999999999999999999999999976521            110     000 0000000111111          


Q ss_pred             CCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy14874        199 GSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRS  278 (1015)
Q Consensus       199 g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~  278 (1015)
                                           ....|+.||.+|+-.++.+++++|+++|+|++.+|..|.|.||..+.....++.+.+++
T Consensus       236 ---------------------~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~  294 (782)
T KOG3676|consen  236 ---------------------YFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALE  294 (782)
T ss_pred             ---------------------eeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHh
Confidence                                 23468899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCc--cccccccCCCHHHHHHHcCCHHHHHHHHhc
Q psy14874        279 SKAL--NVYSKKLGVTALHVAAYFGQADTVRELLSH  312 (1015)
Q Consensus       279 ~~~~--~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~  312 (1015)
                      .++.  ....+..|.|||..|+..|+.++.+.+++.
T Consensus       295 ~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  295 LGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             cCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            9998  778899999999999999999999999997

>KOG4214|consensus

Probab=99.49  E-value=7.6e-14  Score=112.31  Aligned_cols=103  Identities=24%  Similarity=0.306  Sum_probs=88.7

Q ss_pred             CcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy14874         22 WTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD  101 (1015)
Q Consensus        22 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~e  101 (1015)
                      .--..+++++|.++.|+.....|.++|.. ..|++|||+|+..|+.+|+++|+..|++++.+|+.|-|||..|+..||.+
T Consensus         3 d~~~~W~vkNG~~DeVk~~v~~g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~   81 (117)
T KOG4214|consen    3 DMSVAWNVKNGEIDEVKQSVNEGLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD   81 (117)
T ss_pred             chhHhhhhccCcHHHHHHHHHccccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence            34567889999999999999999888844 48999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCccccccccCCCCHHH
Q psy14874        102 LCRFLVHDHAAVIDILTLRKQTPLH  126 (1015)
Q Consensus       102 iv~~Ll~~~~~~i~~~~~~g~t~L~  126 (1015)
                      .|++|+ +.+++-....++|.+.+.
T Consensus        82 cVklLL-~~GAdrt~~~PdG~~~~e  105 (117)
T KOG4214|consen   82 CVKLLL-QNGADRTIHAPDGTALIE  105 (117)
T ss_pred             HHHHHH-HcCcccceeCCCchhHHh
Confidence            999999 456676777777766543

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.37  E-value=3.9e-12  Score=133.63  Aligned_cols=129  Identities=34%  Similarity=0.471  Sum_probs=102.2

Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHhccC--ccccccccCC
Q psy14874         49 VFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY-----ADLCRFLVHDHA--AVIDILTLRK  121 (1015)
Q Consensus        49 ~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~-----~eiv~~Ll~~~~--~~i~~~~~~g  121 (1015)
                      ..+..+.++++.|+..+..+++++++..|++++.++..|.||||.|+..|+     .+++++|++.+.  ...+..+..|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g  147 (235)
T COG0666          68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG  147 (235)
T ss_pred             cCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence            345567788888888888888888888888888888888888888888888     788888885544  3666668888


Q ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcC
Q psy14874        122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH  177 (1015)
Q Consensus       122 ~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~  177 (1015)
                      .||||+|+..|+.++++.|++.|++++..+..|.|+++.|+..++.++++.+++.+
T Consensus       148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         148 NTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            88888888888888888888888888888888888888888888888888888764

>KOG4214|consensus

Probab=99.35  E-value=2.9e-12  Score=103.34  Aligned_cols=95  Identities=27%  Similarity=0.279  Sum_probs=46.3

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHH
Q psy14874         58 LHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVC  137 (1015)
Q Consensus        58 L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~iv  137 (1015)
                      +.+++++|..|-|+-.+..|-++|..- .|++|||+|+..|+.+++.||+ .-+++++..|+.|-|||.-|+..||.++|
T Consensus         6 ~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli-~iGA~i~~kDKygITPLLsAvwEGH~~cV   83 (117)
T KOG4214|consen    6 VAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLI-SIGANIQDKDKYGITPLLSAVWEGHRDCV   83 (117)
T ss_pred             HhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHH-HhccccCCccccCCcHHHHHHHHhhHHHH
Confidence            344555555555555555554444332 4455555555555555555554 23444444555555555555555555555


Q ss_pred             HHHHHCCCCCCCCCCCC
Q psy14874        138 KLLLDLGASIDATDDQG  154 (1015)
Q Consensus       138 k~Ll~~gad~n~~d~~~  154 (1015)
                      |+|+++|||-.....+|
T Consensus        84 klLL~~GAdrt~~~PdG  100 (117)
T KOG4214|consen   84 KLLLQNGADRTIHAPDG  100 (117)
T ss_pred             HHHHHcCcccceeCCCc
Confidence            55555555444443343

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.35  E-value=1.4e-11  Score=129.31  Aligned_cols=129  Identities=35%  Similarity=0.462  Sum_probs=85.9

Q ss_pred             ccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHhCCC---CCCCCCCC
Q psy14874         15 NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGY-----LKVCDALLTHKA---FINSKSRV   86 (1015)
Q Consensus        15 n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~-----~~iv~~Ll~~ga---~in~~~~~   86 (1015)
                      +..+..+.+++|.|+..+..+++++++..|++++..+..|.||||+|+..|+     .++++.|++.|+   +.+.++..
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~  146 (235)
T COG0666          67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED  146 (235)
T ss_pred             ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence            3344556667777777777666666767676666666667777777777666     677777777766   44445666


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCC
Q psy14874         87 GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG  144 (1015)
Q Consensus        87 g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~g  144 (1015)
                      |.||||+|+..|+.++++.|++ .+++++..+..|.|+++.|+..|+.++++.+++.+
T Consensus       147 g~tpl~~A~~~~~~~~~~~ll~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         147 GNTPLHWAALNGDADIVELLLE-AGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCchhHHHHHcCchHHHHHHHh-cCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            7777777777777766666663 45566666666677777777777777777666655

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.31  E-value=3.8e-12  Score=98.33  Aligned_cols=54  Identities=37%  Similarity=0.666  Sum_probs=36.0

Q ss_pred             CCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14874         21 GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL   74 (1015)
Q Consensus        21 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll   74 (1015)
                      |+||||.||+.|+.+++++|+++|.++|..|.+|+||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            667777777777777777777777777777777777777777777777777765

...

>KOG0515|consensus

Probab=99.26  E-value=1.7e-11  Score=129.68  Aligned_cols=118  Identities=28%  Similarity=0.315  Sum_probs=99.4

Q ss_pred             HHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q psy14874         25 LLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCR  104 (1015)
Q Consensus        25 L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~  104 (1015)
                      |.-|+-.|.+|+|+..+..--|+...+.+|-||||.|+..||.+||++|++.|+++|..|.+|+||||+|+..++..+++
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck  633 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK  633 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence            45588889999999998887778778888999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhccCccccccccCCCCHHHHHH--HcCCHHHHHHHHH
Q psy14874        105 FLVHDHAAVIDILTLRKQTPLHLAA--EAGQLQVCKLLLD  142 (1015)
Q Consensus       105 ~Ll~~~~~~i~~~~~~g~t~L~~Aa--~~g~~~ivk~Ll~  142 (1015)
                      .|++.+++.+-..-.++.|+...+-  +.|..++.+||..
T Consensus       634 qLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  634 QLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            9997766666666667888877653  4678888888864

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.24  E-value=1.8e-11  Score=94.49  Aligned_cols=54  Identities=48%  Similarity=0.728  Sum_probs=43.6

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14874         54 GRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV  107 (1015)
Q Consensus        54 g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll  107 (1015)
                      |+||||+|++.|+.+++++|+++|.++|.+|..|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            678999999999999999999999999999999999999999999999999886

...

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.23  E-value=4.8e-11  Score=142.88  Aligned_cols=104  Identities=33%  Similarity=0.352  Sum_probs=63.3

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHH
Q psy14874         57 ALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQV  136 (1015)
Q Consensus        57 ~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~i  136 (1015)
                      .|+.|+..|+.++++.|+++|+++|.+|..|.||||+|+..|+.+++++|++ .+++++..|..|.||||+|+..|+.++
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~-~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLE-FGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            3555666666666666666666666666666666666666666666666663 355556666666666666666666666


Q ss_pred             HHHHHHC-------CCCCCCCCCCCCcHHHHH
Q psy14874        137 CKLLLDL-------GASIDATDDQGQKPIHVA  161 (1015)
Q Consensus       137 vk~Ll~~-------gad~n~~d~~~~t~L~~A  161 (1015)
                      +++|+++       |++++..+..|.+|+..+
T Consensus       164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLED  195 (664)
T ss_pred             HHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence            6666665       666666666666555443

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.23  E-value=4e-11  Score=143.56  Aligned_cols=105  Identities=29%  Similarity=0.407  Sum_probs=87.0

Q ss_pred             cHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChH
Q psy14874         89 TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPE  168 (1015)
Q Consensus        89 t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~  168 (1015)
                      +.|+.|+..|+.+.++.|++ .++++|..|..|.||||+|+.+|+.+++++|+++|++++..|..|.||||+|+..|+.+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~-~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLT-GGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence            35888899999999999984 67788888999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhc-------CCCCcccCCCCCchHHHHH
Q psy14874        169 VAQIFLRA-------HPSLVTATTKDGNTCAHIA  195 (1015)
Q Consensus       169 iv~~Ll~~-------~~~~~~~~~~~g~t~L~~A  195 (1015)
                      ++++|+++       +.+ ....+..|.+++..+
T Consensus       163 iv~~Ll~~~~~~~~~ga~-~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        163 VVQLLSRHSQCHFELGAN-AKPDSFTGKPPSLED  195 (664)
T ss_pred             HHHHHHhCCCcccccCCC-CCccccCCCCccchh
Confidence            99999887       443 344566666665543

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.21  E-value=1.4e-11  Score=95.55  Aligned_cols=55  Identities=38%  Similarity=0.472  Sum_probs=22.4

Q ss_pred             HHhCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy14874         40 MLNNH-ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLA   94 (1015)
Q Consensus        40 Ll~~g-~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A   94 (1015)
                      |+++| +++|..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            44555 56666666666666666666666666666666666666666666666655

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.19  E-value=2e-11  Score=94.65  Aligned_cols=56  Identities=39%  Similarity=0.561  Sum_probs=33.6

Q ss_pred             HHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q psy14874        566 LVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA  621 (1015)
Q Consensus       566 Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A  621 (1015)
                      |++.+..+++..|..|.||||+||..|+.+++++|++.|++++.+|..|+||+|+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            46666778899999999999999999999999999999999999999999999987

>KOG1710|consensus

Probab=99.16  E-value=1.6e-10  Score=113.69  Aligned_cols=123  Identities=28%  Similarity=0.300  Sum_probs=111.1

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccc
Q psy14874        497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDI  576 (1015)
Q Consensus       497 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~  576 (1015)
                      -..||.-+...+..+-...||+.-                 .++|.+|..|.|+|..|+.+|+.++|++|++.+.+..+.
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~v-----------------r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~   74 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTV-----------------RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDK   74 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHh-----------------hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcc
Confidence            357899999999999988888752                 224778899999999999999999999999999998888


Q ss_pred             cccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHh
Q psy14874        577 LTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  636 (1015)
Q Consensus       577 ~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~  636 (1015)
                      ++..+.||||.|+.+|+.++.++|++.|+.+...+.-|+|+-..|+.-|+.++|..+-.+
T Consensus        75 qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   75 QHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             cccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence            888999999999999999999999999999999999999999999999999999876543

>KOG1710|consensus

Probab=99.15  E-value=2.1e-10  Score=112.73  Aligned_cols=119  Identities=29%  Similarity=0.380  Sum_probs=90.8

Q ss_pred             CCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCC
Q psy14874         21 GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSK-SRVGRTALHLAAMNGY   99 (1015)
Q Consensus        21 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~-~~~g~t~L~~A~~~g~   99 (1015)
                      -.+||..|+-.|+.+-...|++---++|.+|.+|.++|..|+..|+.++|++|++.|+|+|.. +..+.||||.|+.+|+
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn   91 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN   91 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence            457888888888888888888864458888889999999999999999999999999988863 4456677777777777


Q ss_pred             HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHH
Q psy14874        100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL  140 (1015)
Q Consensus       100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~L  140 (1015)
                      .|+.+.|+ +.|+..+..|.-|+|+-..|+.-|+-++|..+
T Consensus        92 ~dvcrlll-daGa~~~~vNsvgrTAaqmAAFVG~H~CV~iI  131 (396)
T KOG1710|consen   92 QDVCRLLL-DAGARMYLVNSVGRTAAQMAAFVGHHECVAII  131 (396)
T ss_pred             chHHHHHH-hccCccccccchhhhHHHHHHHhcchHHHHHH
Confidence            77777777 34566666666777777777777776666654

>KOG0515|consensus

Probab=99.09  E-value=2.4e-10  Score=121.17  Aligned_cols=104  Identities=27%  Similarity=0.355  Sum_probs=80.8

Q ss_pred             HHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHH
Q psy14874         91 LHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA  170 (1015)
Q Consensus        91 L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv  170 (1015)
                      |.-|+..|-+|+|+-.+. .-.+....+.+|-|+||-|+..||.+||++|++.|+++|..|.+|+||||+|+..++..+.
T Consensus       554 LLDaaLeGEldlVq~~i~-ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c  632 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIY-EVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC  632 (752)
T ss_pred             HHhhhhcchHHHHHHHHH-hhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence            445777888888888773 3445566677888888888888888888888888888888888888888888888888888


Q ss_pred             HHHhhcCCCCcccCCCCCchHHHHH
Q psy14874        171 QIFLRAHPSLVTATTKDGNTCAHIA  195 (1015)
Q Consensus       171 ~~Ll~~~~~~~~~~~~~g~t~L~~A  195 (1015)
                      +.|++.|+.+...+-.++.|+..-+
T Consensus       633 kqLVe~GaavfAsTlSDmeTa~eKC  657 (752)
T KOG0515|consen  633 KQLVESGAAVFASTLSDMETAAEKC  657 (752)
T ss_pred             HHHHhccceEEeeecccccchhhhc
Confidence            8888888876666666667765543

>KOG3614|consensus

Probab=98.84  E-value=7.8e-09  Score=122.76  Aligned_cols=123  Identities=30%  Similarity=0.485  Sum_probs=99.3

Q ss_pred             ccCCchhhhHHHHHHHHHHHhhHhHH---hHHhHHHHHhhhhHHHHHHHHHhccccchh--hhhccccc--CCchhhHHH
Q psy14874        883 LMSPAPVDTAAKLSSIYITLATKEKE---RAKDLIAAGKHCEGMATELLALAAGADSAG--RILTATDR--RNIEFLDVL  955 (1015)
Q Consensus       883 l~~~~p~~~a~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~l~~~~~--~~~~~l~~~  955 (1015)
                      =....++..|.=.|++|+.||..++|   -++++.++|+.+|.+|+||++.|=+++|+.  ++|++.=.  -|..-|.+|
T Consensus       584 ~~gee~~AkALvA~rLykslA~ea~d~~~~s~el~~~s~~f~~lAveLfd~cy~~de~~A~~LLt~el~~W~~~tCL~LA  663 (1381)
T KOG3614|consen  584 AHGEEAVAKALVASRLYKSLAHEAHDWHEAAKELKTLSDEFEGLAVELFDECYSSDEARALQLLTYELENWGNSTCLQLA  663 (1381)
T ss_pred             HhchhHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHhhcccccHHHHH
Confidence            34566999999999999999988776   899999999999999999999999888764  56776422  244569999


Q ss_pred             hhccccceehhhhHHHHHHHHhhcccc---hhhHHHHHHHHHHHhhhhHHHHHHhcCCC
Q psy14874        956 IENEQKEVIAHTVVQRYLQELWQGSLN---WAAWKTMLLFLTFILCPPVWICFTLSLGH 1011 (1015)
Q Consensus       956 ~~~~~~~~~~~~~~q~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1015)
                      ++++-|+|||||=||.+|+.+|+|++.   -.-||    .+..++|||+  ++.++.+.
T Consensus       664 v~a~~r~FiAH~c~Q~lLt~~W~G~L~~r~~~~~k----vila~icpP~--Il~l~~kf  716 (1381)
T KOG3614|consen  664 VEANAREFIAHPCCQMLLTDKWYGNLQARNNPIWK----VILALICPPL--ILTLLVKF  716 (1381)
T ss_pred             HhcCCCceeccHhHHHHHHHHHhccccccCCCcHH----HHHHHHhhHH--HHHhhcch
Confidence            999999999999999999999999993   33344    3556788986  44444443

>PF13606 Ank_3: Ankyrin repeat

Probab=98.65  E-value=3.2e-08  Score=64.87  Aligned_cols=29  Identities=38%  Similarity=0.615  Sum_probs=21.7

Q ss_pred             CCCcHHHHHHhcCCHHHHHHHHhCCCCCC
Q psy14874         20 IGWTPLLIACNRGHMELVNTMLNNHARVD   48 (1015)
Q Consensus        20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~   48 (1015)
                      +|+||||+||+.|+.++|++|+++|+++|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            47777777777777777777777777765

>KOG0783|consensus

Probab=98.62  E-value=1.5e-08  Score=113.35  Aligned_cols=90  Identities=23%  Similarity=0.244  Sum_probs=82.3

Q ss_pred             hhHhhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Q psy14874         10 ISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQ-EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGR   88 (1015)
Q Consensus        10 ~~~~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~-~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~   88 (1015)
                      .++..|.+|..|+|+||+|+..|..+++++|+++|++++..|. .|+||||.|+..|+.|.+-.|+.+|+.+..+|++|.
T Consensus        41 c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkegl  120 (1267)
T KOG0783|consen   41 CQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGL  120 (1267)
T ss_pred             hhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCC
Confidence            4456799999999999999999999999999999999998875 688999999999999999999999999999999999


Q ss_pred             cHHHHHHHcCC
Q psy14874         89 TALHLAAMNGY   99 (1015)
Q Consensus        89 t~L~~A~~~g~   99 (1015)
                      .||..-++-..
T Consensus       121 splq~~~r~~~  131 (1267)
T KOG0783|consen  121 SPLQFLSRVLS  131 (1267)
T ss_pred             CHHHHHhhccc
Confidence            99998877433

>PF08344 TRP_2: Transient receptor ion channel II; InterPro: IPR013555 TRP (transient receptor potential) channels can be described as tetramers formed by subunits with six transmembrane domains and containing cation-selective pores, which in several cases show high calcium permeability

Probab=98.56  E-value=2.2e-08  Score=76.45  Aligned_cols=30  Identities=40%  Similarity=0.265  Sum_probs=28.2

Q ss_pred             hhccCCchhhhHHHHHHHHHHHhhHhHHhH
Q psy14874        881 FVLMSPAPVDTAAKLSSIYITLATKEKERA  910 (1015)
Q Consensus       881 ~~l~~~~p~~~a~~~~~~~~~~~~~~~~~~  910 (1015)
                      +.|+|+|||.|||+||++|++++..|+||+
T Consensus        34 i~Lts~DPi~~AF~Ls~eL~~la~~E~Efk   63 (63)
T PF08344_consen   34 ISLTSDDPILTAFELSWELRELARIEKEFK   63 (63)
T ss_pred             HHHcCccHHHHHHHHHHHHHHHHHcccccC
Confidence            349999999999999999999999999986

The molecular architecture of TRP channels is reminiscent of voltage-gated channels and comprises six putative transmembrane segments (S1-S6), intracellular N- and C-termini, and a pore-forming reentrant loop between S5 and S6 []. TRP channels represent a superfamily conserved from worms to humans that comprise seven subfamilies []: TRPC (canonical), TRPV (vanilloid), TRPM (melastatin or long TRPs), TRPA (ankyrin), whose only member is the transmembrane protein 1, TRPP(polycystin), TRPML (mucolipin) and TRPN (Nomp-C homologues), which has a single member that can be found in worms, flies, and zebrafish. TRPs are classified essentially according to their primary amino acid sequence rather than selectivity or ligand affinity, due to their heterogenous properties and complex regulation. TRP channels are involved in many physiological functions, ranging from pure sensory functions, such as pheromone signalling, taste transduction, nociception, and temperature sensation, over homeostatic functions, such as Ca2+ and Mg2+ reabsorption and osmoregulation, to many other motile functions, such as muscle contraction and vaso-motor control []. This domain is found in Trp proteins, generally located to the C terminus of the Ankyrin repeats (IPR002110 from INTERPRO).

>KOG0782|consensus

Probab=98.50  E-value=3.2e-07  Score=98.48  Aligned_cols=119  Identities=24%  Similarity=0.314  Sum_probs=83.1

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCcc-ccccccCCCCHHHHHHHcCCHHH
Q psy14874         58 LHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV-IDILTLRKQTPLHLAAEAGQLQV  136 (1015)
Q Consensus        58 L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~-i~~~~~~g~t~L~~Aa~~g~~~i  136 (1015)
                      +..|+..++.--++..-.+|.++-.++.+..+.||+|+..|+-|+|+|+++..+.. +|..+..|.|+||.|+..++-.+
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v  949 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV  949 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence            44455555444444444455555555555556666666666666666666433322 46667788889999888888889


Q ss_pred             HHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874        137 CKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus       137 vk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      +++|++.||.+-.+|..|.||-.-|-+.|..++..||-..
T Consensus       950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            9999999998888888899999999888999988888654

>KOG0818|consensus

Probab=98.48  E-value=5.1e-07  Score=95.77  Aligned_cols=84  Identities=25%  Similarity=0.346  Sum_probs=64.0

Q ss_pred             HHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q psy14874         25 LLIACNRGHMELVNTMLNNHARVDVFD-QEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLC  103 (1015)
Q Consensus        25 L~~A~~~g~~~iv~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv  103 (1015)
                      ||-.++.|+++..=.|+..|+++|..+ ..|.||||.|++.|+..-+++|+-+|||++..|.+|.||+.+|-..||-++.
T Consensus       137 LhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~la  216 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELA  216 (669)
T ss_pred             HHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHH
Confidence            777777777777777777777777653 4566788888888877777777777888777777777887777777777777


Q ss_pred             HHHHh
Q psy14874        104 RFLVH  108 (1015)
Q Consensus       104 ~~Ll~  108 (1015)
                      ..|++
T Consensus       217 eRl~e  221 (669)
T KOG0818|consen  217 ERLVE  221 (669)
T ss_pred             HHHHH
Confidence            77664

>KOG0506|consensus

Probab=98.48  E-value=1.3e-07  Score=99.69  Aligned_cols=95  Identities=25%  Similarity=0.263  Sum_probs=83.5

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHH
Q psy14874         51 DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE  130 (1015)
Q Consensus        51 d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~  130 (1015)
                      +.++..++.+|++.|++..++.+.-.|.|++.+|-+.+|+||.|+..|+++++++|++.-+.+.+.+|..|+|||.-|..
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~  582 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH  582 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence            34556788999999999999999889999999999999999999999999999999988888888999999999999999


Q ss_pred             cCCHHHHHHHHHCCC
Q psy14874        131 AGQLQVCKLLLDLGA  145 (1015)
Q Consensus       131 ~g~~~ivk~Ll~~ga  145 (1015)
                      .+|.+++++|-+.-.
T Consensus       583 F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  583 FKHKEVVKLLEEAQY  597 (622)
T ss_pred             cCcHHHHHHHHHHhc
Confidence            999999999877543

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.48  E-value=2e-07  Score=63.17  Aligned_cols=32  Identities=38%  Similarity=0.563  Sum_probs=21.7

Q ss_pred             CCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCC
Q psy14874         20 IGWTPLLIACNRGHMELVNTMLNNHARVDVFD   51 (1015)
Q Consensus        20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d   51 (1015)
                      +|+||||+|++.|+.++|++|+++|++++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            46677777777777777777777777666554

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF13606 Ank_3: Ankyrin repeat

Probab=98.47  E-value=1.8e-07  Score=61.30  Aligned_cols=30  Identities=40%  Similarity=0.657  Sum_probs=26.5

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy14874         53 EGRSALHLAAEHGYLKVCDALLTHKAFINS   82 (1015)
Q Consensus        53 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~   82 (1015)
                      +|+||||+|++.|+.++|++|+++|+|+|.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            478999999999999999999999998873

>KOG0506|consensus

Probab=98.47  E-value=1.3e-07  Score=99.76  Aligned_cols=93  Identities=24%  Similarity=0.292  Sum_probs=87.1

Q ss_pred             cCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHH
Q psy14874         16 KQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTH-KAFINSKSRVGRTALHLA   94 (1015)
Q Consensus        16 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~in~~~~~g~t~L~~A   94 (1015)
                      .++.++.-++++|++.|++.-++.+.-.|.|++..|.+.+|+||.||..|+.+++++|++. +.+++.+|+.|+|||.-|
T Consensus       501 ~~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA  580 (622)
T KOG0506|consen  501 PRENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDA  580 (622)
T ss_pred             cccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHh
Confidence            4556777899999999999999999999999999999999999999999999999999985 788999999999999999


Q ss_pred             HHcCCHHHHHHHHh
Q psy14874         95 AMNGYADLCRFLVH  108 (1015)
Q Consensus        95 ~~~g~~eiv~~Ll~  108 (1015)
                      -..+|.+++++|-+
T Consensus       581 ~~F~h~~v~k~L~~  594 (622)
T KOG0506|consen  581 KHFKHKEVVKLLEE  594 (622)
T ss_pred             HhcCcHHHHHHHHH
Confidence            99999999999975

>KOG0783|consensus

Probab=98.45  E-value=1.5e-07  Score=105.74  Aligned_cols=80  Identities=28%  Similarity=0.501  Sum_probs=63.7

Q ss_pred             HHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCC-CCCCHHHHHHHhCCHHHHHHHHhcCCCCcc
Q psy14874        388 GLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK-GGARSIHTAARYGHVGIINTLLQKGEKVDV  466 (1015)
Q Consensus       388 ~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~  466 (1015)
                      .++-+++....+.+|..|+|+||+|+..+..++++||+++|++++.+|. .|+||||.|+.+|+++++-.|+.+|....+
T Consensus        35 ~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i  114 (1267)
T KOG0783|consen   35 GFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI  114 (1267)
T ss_pred             HHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE
Confidence            3444455555677888888888888888888888888888888888876 688888888888888888888888876654


Q ss_pred             c
Q psy14874        467 T  467 (1015)
Q Consensus       467 ~  467 (1015)
                      .
T Consensus       115 ~  115 (1267)
T KOG0783|consen  115 K  115 (1267)
T ss_pred             e
Confidence            4

>KOG0782|consensus

Probab=98.41  E-value=7.8e-07  Score=95.53  Aligned_cols=96  Identities=28%  Similarity=0.356  Sum_probs=52.4

Q ss_pred             cccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCch
Q psy14874        113 VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS--IDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNT  190 (1015)
Q Consensus       113 ~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad--~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t  190 (1015)
                      .+-.++.+..+.||+|+..|+-|+|+|++++|..  ++..|..|.|+||.|+..++..+..+|++.++. +..+|..|.|
T Consensus       891 ~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagas-l~ktd~kg~t  969 (1004)
T KOG0782|consen  891 SLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGAS-LRKTDSKGKT  969 (1004)
T ss_pred             ceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchh-heecccCCCC
Confidence            3334455555555555555555555555555543  333445555555555555555555555555555 3445555555


Q ss_pred             HHHHHHHcCCHHHHHHHHh
Q psy14874        191 CAHIAAMQGSVGVIEELMK  209 (1015)
Q Consensus       191 ~L~~A~~~g~~~iv~~Ll~  209 (1015)
                      |-.-|-+.|+.++..+|-+
T Consensus       970 p~eraqqa~d~dlaayle~  988 (1004)
T KOG0782|consen  970 PQERAQQAGDPDLAAYLES  988 (1004)
T ss_pred             hHHHHHhcCCchHHHHHhh
Confidence            5555555555555555544

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.39  E-value=4e-07  Score=61.73  Aligned_cols=33  Identities=48%  Similarity=0.741  Sum_probs=30.4

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q psy14874        580 RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD  612 (1015)
Q Consensus       580 ~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~  612 (1015)
                      +|.||||+|+..|+.+++++|+++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            488999999999999999999999999998874

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0511|consensus

Probab=98.12  E-value=8.1e-06  Score=84.13  Aligned_cols=73  Identities=26%  Similarity=0.323  Sum_probs=63.7

Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy14874         24 PLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN   97 (1015)
Q Consensus        24 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~   97 (1015)
                      -|+.||+.|+.+.|++|++.|.++|.+|....+||.+|+..||.++|++|+++||--....-.|..++ +++.+
T Consensus        39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~-YgaLn  111 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH-YGALN  111 (516)
T ss_pred             HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh-hhhhh
Confidence            48999999999999999999999999999999999999999999999999999997665555676654 44444

>KOG0818|consensus

Probab=98.08  E-value=1.1e-05  Score=86.10  Aligned_cols=88  Identities=28%  Similarity=0.336  Sum_probs=70.1

Q ss_pred             cHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHH
Q psy14874        373 NPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG  452 (1015)
Q Consensus       373 tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~  452 (1015)
                      .-||.+++.|+.+..-.|+..|++.+-.....|.||||.|++.|+.--+++|+-.|||++..|.+|.||+.+|-..||-+
T Consensus       135 rQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~  214 (669)
T KOG0818|consen  135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHE  214 (669)
T ss_pred             HHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchH
Confidence            35777777888887777777777755555677888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHhc
Q psy14874        453 IINTLLQK  460 (1015)
Q Consensus       453 ~v~~Ll~~  460 (1015)
                      +.+.|++.
T Consensus       215 laeRl~e~  222 (669)
T KOG0818|consen  215 LAERLVEI  222 (669)
T ss_pred             HHHHHHHH
Confidence            77777764

>KOG0522|consensus

Probab=98.07  E-value=8.9e-06  Score=88.20  Aligned_cols=90  Identities=28%  Similarity=0.412  Sum_probs=77.8

Q ss_pred             HHHHHHHcCcHHHHHH-HHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChH
Q psy14874        550 ALHLAAMNGYADLCRF-LVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPE  628 (1015)
Q Consensus       550 ~L~~A~~~g~~~~v~~-Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~  628 (1015)
                      |+|.++-....+-... |...-...++..|..|.||||+|+..|+.+.++.|+.+|+++..+++.|++|||-|+..|+.+
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q  102 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ  102 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence            6999988777665544 443455677899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCc
Q psy14874        629 VAQIFLRAHPS  639 (1015)
Q Consensus       629 ~~~~ll~~~~~  639 (1015)
                      ++..++.+...
T Consensus       103 ~i~~vlr~~~~  113 (560)
T KOG0522|consen  103 IITEVLRHLKY  113 (560)
T ss_pred             HHHHHHHHhHH
Confidence            99888876544

>KOG2384|consensus

Probab=98.00  E-value=1.1e-05  Score=75.60  Aligned_cols=67  Identities=28%  Similarity=0.399  Sum_probs=56.7

Q ss_pred             hhccCCCCCCcHHHHHHhcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy14874         13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAF   79 (1015)
Q Consensus        13 ~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~   79 (1015)
                      .||.+|..|||||+.|+..|+.+.|.||+.+| +.+-..|.+|.+++.+|=+.|..++++.|.++-.+
T Consensus         4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen    4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE   71 (223)
T ss_pred             CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence            47888888888888888888888888888888 78888888888888888888888888888876443

>KOG0522|consensus

Probab=97.99  E-value=1.3e-05  Score=86.86  Aligned_cols=112  Identities=21%  Similarity=0.193  Sum_probs=87.1

Q ss_pred             cHHHHHHhcCCHHHHHHHHhC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy14874         23 TPLLIACNRGHMELVNTMLNN--HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA  100 (1015)
Q Consensus        23 t~L~~A~~~g~~~iv~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~  100 (1015)
                      -|||.++...+.+-...++..  +..++..|..|+||||+|+..|+.+.++.|+.+|+++..+++.|+++||.|+..|+.
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~  101 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE  101 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence            358999988877755554332  456788899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCC
Q psy14874        101 DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA  145 (1015)
Q Consensus       101 eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~ga  145 (1015)
                      .++..++..+...-.           .-...+-..+++.|.+.+-
T Consensus       102 q~i~~vlr~~~~q~~-----------~~~~~~~p~ll~~l~~~~D  135 (560)
T KOG0522|consen  102 QIITEVLRHLKYQAW-----------EKWERRLPRLLAKLSEMPD  135 (560)
T ss_pred             HHHHHHHHHhHHHHH-----------HHHHhcchHHHHHHHhCcc
Confidence            998888754321100           1134566778888877653

>KOG0705|consensus

Probab=97.94  E-value=2.2e-05  Score=85.45  Aligned_cols=92  Identities=29%  Similarity=0.284  Sum_probs=70.3

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCC--CC--CCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHH
Q psy14874         55 RSALHLAAEHGYLKVCDALLTHKAFI--NS--KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE  130 (1015)
Q Consensus        55 ~t~L~~A~~~g~~~iv~~Ll~~ga~i--n~--~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~  130 (1015)
                      ..-|..|+...++..+-+||.+|...  |.  .+.+|+|+||+||+.|+..+.++|+ =++.++-..|.+|+|+|.||-.
T Consensus       625 gqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLi-Wyg~dv~~rda~g~t~l~yar~  703 (749)
T KOG0705|consen  625 GQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLI-WYGVDVMARDAHGRTALFYARQ  703 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHH-HhCccceecccCCchhhhhHhh
Confidence            34577777777888888888887642  22  2345678888888888888888888 5677888888888888888888


Q ss_pred             cCCHHHHHHHHHCCCCC
Q psy14874        131 AGQLQVCKLLLDLGASI  147 (1015)
Q Consensus       131 ~g~~~ivk~Ll~~gad~  147 (1015)
                      .|..+++..|+++|+..
T Consensus       704 a~sqec~d~llq~gcp~  720 (749)
T KOG0705|consen  704 AGSQECIDVLLQYGCPD  720 (749)
T ss_pred             cccHHHHHHHHHcCCCc
Confidence            88888888888888764

>KOG0705|consensus

Probab=97.90  E-value=2.5e-05  Score=84.93  Aligned_cols=90  Identities=22%  Similarity=0.221  Sum_probs=77.1

Q ss_pred             HHHHHHHcCcHHHHHHHHhcCCc---cccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy14874        550 ALHLAAMNGYADLCRFLVHDHAA---VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNF  626 (1015)
Q Consensus       550 ~L~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~  626 (1015)
                      -|.-|+...+...+-+||.++..   +....+.+|+|+||+||..|+..+.++|+=+|+|+-++|..|+|+|.||-+.+.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            45667777777888888876543   334456788999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhCCc
Q psy14874        627 PEVAQIFLRAHPS  639 (1015)
Q Consensus       627 ~~~~~~ll~~~~~  639 (1015)
                      .|++.+|++++-.
T Consensus       707 qec~d~llq~gcp  719 (749)
T KOG0705|consen  707 QECIDVLLQYGCP  719 (749)
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999998743

>KOG2384|consensus

Probab=97.88  E-value=2.3e-05  Score=73.40  Aligned_cols=71  Identities=18%  Similarity=0.171  Sum_probs=62.5

Q ss_pred             ccccccccCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCcccc
Q psy14874        572 AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG-ASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT  642 (1015)
Q Consensus       572 ~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~  642 (1015)
                      .++|.+|..|+||||+|+..|+.+.+.+|+.+| +.+...|..|.++..+|-+.|..++++.|.+...+...
T Consensus         3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~   74 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSH   74 (223)
T ss_pred             CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCC
Confidence            356888999999999999999999999999999 89999999999999999999999999999987555433

>KOG0521|consensus

Probab=97.86  E-value=1.3e-05  Score=95.53  Aligned_cols=115  Identities=28%  Similarity=0.255  Sum_probs=82.4

Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874         17 QTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM   96 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~   96 (1015)
                      ....|.+++-.|.+.-+-..+.+..        .-..|.|+||.|+..|...+++.|+++|+++|..+..|+||+|.+..
T Consensus       627 ~~~~~~~~~~~~~~~~~~~~~n~~~--------~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~  698 (785)
T KOG0521|consen  627 ASSDGECLPRIATALAHGCCENWPV--------VLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATA  698 (785)
T ss_pred             hccCccchhhhhhhhcchhhhccch--------hhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhh
Confidence            3445566665555554433332221        22356788888888888888888888888888888888888888888


Q ss_pred             cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHH
Q psy14874         97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL  140 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~L  140 (1015)
                      .|+...+..|++ .++..+..+.+|.+|+++|....+.+++-++
T Consensus       699 ~g~~~~~~~ll~-~~a~~~a~~~~~~~~l~~a~~~~~~d~~~l~  741 (785)
T KOG0521|consen  699 SGHTSIACLLLK-RGADPNAFDPDGKLPLDIAMEAANADIVLLL  741 (785)
T ss_pred             hcccchhhhhcc-ccccccccCccCcchhhHHhhhccccHHHHH
Confidence            888888888884 6777888888888888888766555544444

>KOG0511|consensus

Probab=97.59  E-value=0.0001  Score=76.35  Aligned_cols=52  Identities=23%  Similarity=0.326  Sum_probs=29.6

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14874         57 ALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH  108 (1015)
Q Consensus        57 ~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~  108 (1015)
                      -|..|++.|+.+.|++|++.|.++|+.|+...+||.+|+..||.++|++|++
T Consensus        39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLe   90 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLE   90 (516)
T ss_pred             HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHH
Confidence            3555555555555555555555555555555555555555555555555553

>KOG0520|consensus

Probab=97.54  E-value=0.0001  Score=87.04  Aligned_cols=127  Identities=22%  Similarity=0.222  Sum_probs=100.6

Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHH
Q psy14874         49 VFDQEGRSALHLAAEHGYLKVCDALLTH-KAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHL  127 (1015)
Q Consensus        49 ~~d~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~  127 (1015)
                      .....|.+.+|+++..++.-+++.+++. |......+.+|...+|. |..++.+.+-+|+.-.+..++..|..|+||||+
T Consensus       569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~w  647 (975)
T KOG0520|consen  569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHW  647 (975)
T ss_pred             cCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccch
Confidence            3456778999999999999999999986 66556667777788888 566777777777666788889999999999999


Q ss_pred             HHHcCCHHHHHHHHHCCCCCCC------CCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874        128 AAEAGQLQVCKLLLDLGASIDA------TDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus       128 Aa~~g~~~ivk~Ll~~gad~n~------~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      |+..|+..++..|++.|++...      .+-.|.|+-..|-.+|+..+..+|-+.
T Consensus       648 Aa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  648 AAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             HhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            9999999999999988876543      333577888888888888777777654

>KOG0521|consensus

Probab=97.49  E-value=0.00012  Score=87.62  Aligned_cols=143  Identities=20%  Similarity=0.269  Sum_probs=103.0

Q ss_pred             CCCCCCcHHHHHHh---cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874         17 QTSIGWTPLLIACN---RGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL   93 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~---~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~   93 (1015)
                      ....|.+.+|+++.   ...+.+-..+..       ...++.++...|...-....+.+..        .-..|.|+||.
T Consensus       598 ~~~~~~~~~h~e~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~n~~~--------~~~~~~s~lh~  662 (785)
T KOG0521|consen  598 SSADGSTTLHYEILECLKLLLFIKELLVK-------ASSDGECLPRIATALAHGCCENWPV--------VLCIGCSLLHV  662 (785)
T ss_pred             cccccccccchhhhhccccccchHHHHHH-------hccCccchhhhhhhhcchhhhccch--------hhhcccchhhh
Confidence            34567788888873   112221111111       1223445555555443333332221        22358899999


Q ss_pred             HHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHH
Q psy14874         94 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF  173 (1015)
Q Consensus        94 A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~L  173 (1015)
                      |+..|..-++.+|+ +.++++|..+..|++|+|.+...|+...+..|+++||+++..+.+|.+|+++|....+.+++-++
T Consensus       663 a~~~~~~~~~e~ll-~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~d~~~l~  741 (785)
T KOG0521|consen  663 AVGTGDSGAVELLL-QNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAANADIVLLL  741 (785)
T ss_pred             hhccchHHHHHHHH-hcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhccccHHHHH
Confidence            99999999999999 56788999999999999999999999999999999999999999999999999888777766655


Q ss_pred             hh
Q psy14874        174 LR  175 (1015)
Q Consensus       174 l~  175 (1015)
                      .-
T Consensus       742 ~l  743 (785)
T KOG0521|consen  742 RL  743 (785)
T ss_pred             hh
Confidence            43

>KOG0520|consensus

Probab=97.31  E-value=0.00026  Score=83.78  Aligned_cols=129  Identities=19%  Similarity=0.158  Sum_probs=103.3

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCcHH
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALL-THKAFINSKSRVGRTAL   91 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll-~~ga~in~~~~~g~t~L   91 (1015)
                      +....-.|+|.||.++..+...+++.+++- |-..+..|.+|.-.+|+++..| .+.+-+|+ -.|..++.+|..|+|||
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg-~ewA~ll~~~~~~ai~i~D~~G~tpL  645 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALG-YEWAFLPISADGVAIDIRDRNGWTPL  645 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcC-CceeEEEEeecccccccccCCCCccc
Confidence            455678899999999999999999999995 5555567888888888855554 45554444 56888999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhccCcc-----ccccccCCCCHHHHHHHcCCHHHHHHHHHC
Q psy14874         92 HLAAMNGYADLCRFLVHDHAAV-----IDILTLRKQTPLHLAAEAGQLQVCKLLLDL  143 (1015)
Q Consensus        92 ~~A~~~g~~eiv~~Ll~~~~~~-----i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~  143 (1015)
                      |+|+.+|+..++.-|++.+...     .......|.|+-..|..+|+..+.-+|-+.
T Consensus       646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            9999999999999998533221     334455699999999999999999998775

>smart00248 ANK ankyrin repeats

Probab=96.28  E-value=0.0068  Score=38.86  Aligned_cols=28  Identities=36%  Similarity=0.629  Sum_probs=18.8

Q ss_pred             CCCcHHHHHHhcCCHHHHHHHHhCCCCC
Q psy14874         20 IGWTPLLIACNRGHMELVNTMLNNHARV   47 (1015)
Q Consensus        20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~   47 (1015)
                      +|.||+|+|+..|+.+++++|+++|.++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            3567777777777777777777766544

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=95.64  E-value=0.094  Score=49.98  Aligned_cols=139  Identities=15%  Similarity=0.153  Sum_probs=92.4

Q ss_pred             CcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy14874         22 WTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD  101 (1015)
Q Consensus        22 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~e  101 (1015)
                      +-.|..|++.+.+.++++.-+...+-   -..+++.+..||+..+.|||++.-++=.     -.+-.+.+..|...++.+
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qnL~-----i~~~~~iFdIA~~~kDls  118 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQNLH-----IYNPEDIFDIAFAKKDLS  118 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhccC-----CCCchhhhhhhhhccchh
Confidence            34678899999999999887743211   1345688899999999999999944322     122345677888888877


Q ss_pred             HH----HHHHhccCccccccc--cCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh
Q psy14874        102 LC----RFLVHDHAAVIDILT--LRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR  175 (1015)
Q Consensus       102 iv----~~Ll~~~~~~i~~~~--~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~  175 (1015)
                      +.    +++.++.... +..|  .--..-|..|+..|-++.+.-.+++|-+++.      ++|..|+..++..++.+++.
T Consensus       119 LyslGY~l~~~~~~~~-~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  119 LYSLGYKLLFNRMMSE-HNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHHHHhhcccc-cccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence            62    2233221110 0000  0011346788889998888888888877643      68888898888888888764

These proteins may be involved in promoting survival of infected macrophages [].

>KOG2505|consensus

Probab=95.53  E-value=0.018  Score=62.52  Aligned_cols=62  Identities=24%  Similarity=0.230  Sum_probs=50.9

Q ss_pred             HHHHHHHHhCCCCCCCC------CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy14874         34 MELVNTMLNNHARVDVF------DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAA   95 (1015)
Q Consensus        34 ~~iv~~Ll~~g~~~~~~------d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~   95 (1015)
                      .+.|.+|.+++.+.|..      +.--.|+||+|+..|.-++|.++|++|+|+..+|..|+||..++.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            46788888888776532      334568999999999999999999999999999999999988876

>smart00248 ANK ankyrin repeats

Probab=95.50  E-value=0.025  Score=36.04  Aligned_cols=27  Identities=70%  Similarity=0.991  Sum_probs=18.2

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCC
Q psy14874        121 KQTPLHLAAEAGQLQVCKLLLDLGASI  147 (1015)
Q Consensus       121 g~t~L~~Aa~~g~~~ivk~Ll~~gad~  147 (1015)
                      |.||+|+|+..|+.+++++|++.|.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            456777777777777777777666654

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505|consensus

Probab=95.39  E-value=0.024  Score=61.66  Aligned_cols=72  Identities=25%  Similarity=0.321  Sum_probs=54.2

Q ss_pred             HHHHHHHHhcCCcc-----ccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHH
Q psy14874        560 ADLCRFLVHDHAAV-----IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL  634 (1015)
Q Consensus       560 ~~~v~~Ll~~~~~~-----~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll  634 (1015)
                      ...+++|.++....     +...+.--.|+||+|+..|.-++|.+||+.|+|+...|..|+||..++.   +.|+-..++
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F~  480 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIFI  480 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHHH
Confidence            55677777654322     2233334679999999999999999999999999999999999999876   445544444

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.25  E-value=0.087  Score=51.51  Aligned_cols=117  Identities=17%  Similarity=0.231  Sum_probs=84.9

Q ss_pred             CCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcc----hhhcccCCCCCcHHHHH
Q psy14874        337 MTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAA----DLLQSADKNGKTCLHIA  412 (1015)
Q Consensus       337 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~----~~~~~~d~~g~t~L~~A  412 (1015)
                      .-.|.-|+...+.+.+.-++..         ..+..+++.+++.++..+++.+|+.+-.    ++.....  +.--+.++
T Consensus       154 ~isledAV~AsN~~~i~~~Vtd---------KkdA~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~--~~ydieY~  222 (284)
T PF06128_consen  154 DISLEDAVKASNYEEISNLVTD---------KKDAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEK--ELYDIEYL  222 (284)
T ss_pred             cccHHHHHhhcCHHHHHHHhcc---------hHHHHHHHHHHhcccHHHHHHHHHhhcceecchhhhcCc--chhhHHHH
Confidence            3457788888888888777643         2334688999999999999999998632    1111111  11123343


Q ss_pred             HH--cCCHHHHHHHhhCC-CCcccC---CCCCCCHHHHHHHhCCHHHHHHHHhcCCCC
Q psy14874        413 AT--HGHLQMVEVLLGQG-AEINAT---DKGGARSIHTAARYGHVGIINTLLQKGEKV  464 (1015)
Q Consensus       413 ~~--~g~~~iv~~Ll~~g-a~i~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~  464 (1015)
                      ..  +.+..++++++++| +++|.+   -..|.|.|.-|.++++.+++..|+++|+-.
T Consensus       223 LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~  280 (284)
T PF06128_consen  223 LSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS  280 (284)
T ss_pred             HhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence            33  35788999999998 577754   457999999999999999999999999843

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=94.16  E-value=0.33  Score=46.39  Aligned_cols=49  Identities=12%  Similarity=0.086  Sum_probs=27.8

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhc
Q psy14874        261 VHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSH  312 (1015)
Q Consensus       261 L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~  312 (1015)
                      +..|++.+.+.+++...+.....   .....+.+..|++..+.++|+|+-++
T Consensus        50 l~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qn   98 (192)
T PF03158_consen   50 LYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQN   98 (192)
T ss_pred             HHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhc
Confidence            44566666666666655443211   12334556677777777777777443

These proteins may be involved in promoting survival of infected macrophages [].

>PLN03223 Polycystin cation channel protein; Provisional

Probab=91.88  E-value=0.089  Score=64.59  Aligned_cols=53  Identities=15%  Similarity=0.022  Sum_probs=45.4

Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCCC-----CCchHHHHHHHHHHHhhhhhhhhhhhhhh
Q psy14874        796 WYEWTLLVWLSGLLLFELTNPSDK-----SGLGWVKLAVLLFGIFGVALHLLEYTFIL  848 (1015)
Q Consensus       796 ~~e~~~~~~v~gl~~~e~~~~~~~-----~~~~~~~~~wn~~~~~~~~~~~~~~~~~~  848 (1015)
                      ..|++..+|++.+++.|++++...     +.+.|++..|||+|++.+.+.++++.+.+
T Consensus      1177 acEIIFVLFILYfIyrEIkEI~k~KK~RG~~laYFKSfWNwLEIl~IlLS~AAIvLYF 1234 (1634)
T PLN03223       1177 AMEILLAIGAVYSVYEEAMDFGSSKKTRGSYLAYFLSGWNYVDFASIGLHLATIMMWF 1234 (1634)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhccchHHHHHHHHHHHHHHHHHHH
Confidence            568888999999999999987653     34799999999999999999999987653

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=91.15  E-value=0.94  Score=44.60  Aligned_cols=47  Identities=13%  Similarity=0.258  Sum_probs=33.6

Q ss_pred             CHHHHHHHHHCC-CCCCC---CCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874        133 QLQVCKLLLDLG-ASIDA---TDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       133 ~~~ivk~Ll~~g-ad~n~---~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~  179 (1015)
                      +..++++++++| +++|.   +-+.|.|-|..|..+++.+++.+|+++|+.
T Consensus       229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence            456777777777 45553   345677888888888888888888887763

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=90.85  E-value=0.59  Score=38.63  Aligned_cols=47  Identities=15%  Similarity=0.268  Sum_probs=26.8

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcc
Q psy14874         57 ALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH  110 (1015)
Q Consensus        57 ~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~  110 (1015)
                      -+..|+.+|+.||++.+++.+. ++      ...+..|+...+.|++++|++++
T Consensus         9 tl~~Ai~GGN~eII~~c~~~~~-~~------~~~l~~AI~~H~n~i~~~l~~~y   55 (76)
T PF11929_consen    9 TLEYAIIGGNFEIINICLKKNK-PD------NDCLEYAIKSHNNEIADWLIENY   55 (76)
T ss_pred             HHHHHHhCCCHHHHHHHHHHhc-cH------HHHHHHHHHHhhHHHHHHHHHhc
Confidence            4566666666666666665431 11      23566666666666666666543

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=87.57  E-value=0.8  Score=37.86  Aligned_cols=66  Identities=17%  Similarity=0.156  Sum_probs=48.9

Q ss_pred             CcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy14874         22 WTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD  101 (1015)
Q Consensus        22 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~e  101 (1015)
                      ..-+..|+..|+.++++.+++.+ .++      ...+..|+...+-+++++|+++. +.+       -++..+...++.+
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~y-~~~-------i~~~~~~~~~N~~   71 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIENY-NLK-------ISISDCLKYYNLR   71 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHhc-CCC-------cCHHHHHHHCChH
Confidence            35689999999999999999865 322      45799999999999999999963 221       1244555566554


Q ss_pred             H
Q psy14874        102 L  102 (1015)
Q Consensus       102 i  102 (1015)
                      +
T Consensus        72 a   72 (76)
T PF11929_consen   72 A   72 (76)
T ss_pred             h
Confidence            4

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys

Probab=84.01  E-value=1.1  Score=51.50  Aligned_cols=51  Identities=12%  Similarity=0.127  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhhhh
Q psy14874        797 YEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFIL  848 (1015)
Q Consensus       797 ~e~~~~~~v~gl~~~e~~~~~~~~~~~~~~~~wn~~~~~~~~~~~~~~~~~~  848 (1015)
                      .|.+.++.++-+++.|++++++.| +.|+++.||++|++.+.+.++.+.+.+
T Consensus       213 ~~i~f~~~~l~~~~~ei~~i~~~g-~~y~~~~WN~~e~~ii~ls~~~i~~~~  263 (425)
T PF08016_consen  213 CEILFVLFVLYFLYREIKKIRREG-RAYFKSFWNWLELLIILLSLAVIVLYF  263 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh-hHHhhhcCcHHHHHHHHHHHHHHHHHH
Confidence            366667777888889999998888 999999999999998888777776554

Cyst development is associated with impairment of kidney function, and ultimately kidney failure and death []. Most cases of autosomal dominant PKD result from mutations in the PKD1 gene that cause premature protein termination. A second gene for autosomal dominant polycystic kidney disease has been identified by positional cloning []. The predicted 968-amino acid sequence of the PKD2 gene product (polycystin-2) contains 6 transmembrane domains, with intracellular N- and C-termini. Polycystin-2 shares some similarity with the family of voltage-activated calcium (and sodium) channels, and contains a potential calcium-binding domain. Polycystin-2 is strongly expressed in ovary, foetal and adult kidney, testis, and small intestine. Polycystin-1 requires the presence of this protein for stable expression and is believed to interact with it via its C terminus. All mutations between exons 1 and 11 result in a truncated polycystin-2 that lacks a calcium-binding EF-hand domain and the cytoplasmic domains required for the interaction of polycystin-2 with polycystin-1 []. PKD2, although clinically milder than PKD1, has a deleterious impact on life expectancy. This entry contains proteins belonging to the polycystin family including Mucolipin and Polycystin-1 and -2 (PKD1 and PKD2). The domain contains the cation channel region of PKD1 and PKD2 proteins. PKD1 and PKD2 may function through a common signalling pathway that is necessary for normal tubulogenesis. The PKD2 gene product has six transmembrane spans with intracellular amino- and carboxyl-termini []. Mucolipin is a cationic channel which probably plays a role in the endocytic pathway and in the control of membrane trafficking of proteins and lipids. It could play a major role in the calcium ion transport regulating lysosomal exocytosis [, , ].

>KOG3599|consensus

Probab=81.50  E-value=3.7  Score=50.12  Aligned_cols=56  Identities=11%  Similarity=0.010  Sum_probs=45.6

Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHhhhhhhhhhhhhhhhcC
Q psy14874        796 WYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFGVALHLLEYTFILSEG  851 (1015)
Q Consensus       796 ~~e~~~~~~v~gl~~~e~~~~~~~~~~~~~~~~wn~~~~~~~~~~~~~~~~~~~~~  851 (1015)
                      ..+.+.+++++=++++|+..+|..+.+.|++..|||+|++-+.+.++.+.+.....
T Consensus       467 l~~vvf~l~~~yf~~~e~~~i~~~~~~~y~~s~wN~ld~~i~~ls~~~~~~~~~r~  522 (798)
T KOG3599|consen  467 LCEVVFLLFVLYFAVAEGLKIWIHRLGRYVRSKWNWLDLAIVLLSVVLLVLMITRT  522 (798)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34566667777888899999999999999999999999988888887777654443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	1015
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		1e-41
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		4e-41
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		2e-40
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		2e-23
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		2e-09
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		5e-26
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		6e-25
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		1e-22
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		9e-10
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		2e-23
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		6e-18
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		4e-07
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		4e-23
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		8e-18
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		9e-17
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		2e-07
2xee_A	157	Structural Determinants For Improved Thermal Stabil		8e-23
2xee_A	157	Structural Determinants For Improved Thermal Stabil		2e-18
2xee_A	157	Structural Determinants For Improved Thermal Stabil		4e-07
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		6e-22
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-18
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		1e-21
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		2e-20
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		3e-17
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		2e-21
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		2e-18
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-20
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-19
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		7e-16
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		1e-20
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		7e-15
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-20
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		8e-20
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-17
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		3e-20
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		1e-19
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		6e-15
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		6e-20
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-14
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		7e-20
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-15
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-19
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		3e-14
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		3e-19
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		2e-15
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		5e-19
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		2e-15
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		9e-08
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		8e-19
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		5e-16
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		8e-19
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		6e-18
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-16
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-18
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		3e-16
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		2e-14
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		3e-14
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-09
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		2e-18
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		4e-16
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		1e-08
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		2e-18
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		9e-18
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		2e-14
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-18
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-15
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		4e-18
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		4e-17
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		4e-18
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		8e-17
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		9e-18
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		2e-17
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		4e-16
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		9e-18
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		1e-17
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		2e-17
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		2e-14
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		7e-12
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		2e-16
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		3e-15
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		5e-14
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		4e-08
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		8e-15
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		3e-08
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		3e-14
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		4e-12
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		2e-11
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		7e-11
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		1e-09
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		2e-05
1uoh_A	226	Human Gankyrin Length = 226		6e-14
1uoh_A	226	Human Gankyrin Length = 226		2e-08
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		6e-14
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		2e-08
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		2e-13
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		2e-13
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		3e-09
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		1e-06
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		2e-13
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		4e-08
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		1e-06
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		3e-13
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		9e-10
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		3e-13
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		4e-13
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		3e-09
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		3e-13
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		3e-10
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		4e-13
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		7e-12
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		3e-10
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		5e-05
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		4e-13
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		9e-10
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		6e-13
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		7e-13
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		9e-10
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		6e-13
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		2e-09
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		9e-04
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		8e-13
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		3e-09
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		8e-04
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		9e-13
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		3e-10
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		4e-10
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		5e-07
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		6e-05
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		1e-12
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		2e-12
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		8e-10
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		1e-12
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		2e-07
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		3e-12
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		3e-09
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		3e-12
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		3e-09
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		5e-12
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		3e-08
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		5e-08
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		5e-05
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		2e-11
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		7e-08
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		6e-07
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		3e-11
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		3e-08
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		7e-08
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		6e-05
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		4e-11
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		1e-10
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		3e-10
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		4e-11
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		8e-10
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		3e-08
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		1e-10
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		1e-10
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		1e-10
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		3e-04
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		2e-10
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		4e-04
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		2e-10
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		5e-04
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		5e-10
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		5e-10
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		5e-10
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		8e-09
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		6e-10
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		2e-06
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		1e-09
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		1e-09
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		2e-09
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		2e-09
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		4e-09
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		9e-09
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		3e-04
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		1e-08
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		2e-08
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		2e-05
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		6e-04
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		2e-08
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		5e-07
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		7e-06
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		7e-04
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		3e-08
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		2e-07
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		2e-05
2xen_A	91	Structural Determinants For Improved Thermal Stabil		4e-08
2xen_A	91	Structural Determinants For Improved Thermal Stabil		3e-04
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		7e-08
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		2e-06
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		5e-05
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		1e-07
2rfa_A	232	Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat		1e-07
2rfa_A	232	Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat		1e-05
2rfa_A	232	Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat		7e-04
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		2e-07
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		7e-05
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		9e-05
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		2e-07
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		1e-04
1oy3_D	282	Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer		5e-07
1oy3_D	282	Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer		2e-06
1k3z_D	282	X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodi		5e-07
1k3z_D	282	X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodi		2e-06
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		8e-07
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		9e-07
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		2e-06
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		1e-04
3so8_A	162	Crystal Structure Of Ankra Length = 162		2e-06
3so8_A	162	Crystal Structure Of Ankra Length = 162		1e-04
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		2e-06
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		1e-04
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-06
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		5e-06
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		7e-06
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		8e-06
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		3e-05
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		3e-05
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		3e-05
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		2e-04
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		6e-05
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		7e-05
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		6e-05
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		7e-05
3ljn_A	364	Ankyrin Repeat Protein From Leishmania Major Length		1e-04
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		1e-04
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		1e-04
1ymp_A	135	The Crystal Structure Of A Partial Mouse Notch-1 An		3e-04
1ycs_B	239	P53-53bp2 Complex Length = 239		5e-04
1sw6_A	327	S. Cerevisiae Swi6 Ankyrin-Repeat Fragment Length =		6e-04
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		7e-04
3ui2_A	244	Crystal Structure Of The Cpsrp54 Tail Bound To Cpsr		8e-04
3deo_A	183	Structural Basis For Specific Substrate Recognition		8e-04

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  169 bits (427), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 206/404 (50%), Gaps = 25/404 (6%)
Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINS 82
           TPL +A   GH+ +V  +L   A  +V + +  + LH+AA  G+ +V   LL +KA +N+
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 75
Query: 83  KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 142
           K++  +T LH AA  G+ ++ + L+ ++A   ++ T    TPLH+AA  G ++    LL+
Sbjct: 76  KAKDDQTPLHCAARIGHTNMVKLLLENNANP-NLATTAGHTPLHIAAREGHVETVLALLE 134
Query: 143 LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR--AHPSLVTATTKDGNTCAHIAAMQGS 200
             AS      +G  P+HVAA+     VA++ L   AHP+   A  K+G T  H+A    +
Sbjct: 135 KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN---AAGKNGLTPLHVAVHHNN 191
Query: 201 VGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTA 260
           + +++ L+    S    A N     TPL +AA+     V R L++ G S   E+  G T 
Sbjct: 192 LDIVKLLLPRGGSPHSPAWNGY---TPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTP 248
Query: 261 VHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSD 320
           +HLAAQ GH +++  + S +A      K G+T LH+ A  G       L+ H        
Sbjct: 249 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH-------- 300
Query: 321 PPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACF 380
                  + +  +  G TPLH+A++ GN  +V+ LL      V+A+T+  GY+PLH A  
Sbjct: 301 -----GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQA-DVNAKTKL-GYSPLHQAAQ 353
Query: 381 GGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
            GH  +V LLL   A        +G T L IA   G++ + +VL
Sbjct: 354 QGHTDIVTLLLKNGAS-PNEVSSDGTTPLAIAKRLGYISVTDVL 396

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  167 bits (422), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/403 (33%), Positives = 200/403 (49%), Gaps = 23/403 (5%)
Query: 56  SALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVID 115
           + LH+A+  G+L +   LL   A  N  +    T LH+AA  G+ ++ ++L+ + A V +
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV-N 74
Query: 116 ILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 175
                 QTPLH AA  G   + KLLL+  A+ +     G  P+H+AA+    E     L 
Sbjct: 75  AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 134
Query: 176 AHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGG 235
              S     TK G T  H+AA  G V V E L++ D     + +N +T   PL +A    
Sbjct: 135 KEASQA-CMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLT---PLHVAVHHN 190
Query: 236 HANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEM-RSSKALNVYSKKLGVTAL 294
           + ++V++L+  G S       G+T +H+AA+    +V   + +   + N  S + GVT L
Sbjct: 191 NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ-GVTPL 249
Query: 295 HVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRL 354
           H+AA  G A+ V  LLS                 G LG++SG+TPLHL A  G+  V  +
Sbjct: 250 HLAAQEGHAEMVALLLS-------------KQANGNLGNKSGLTPLHLVAQEGHVPVADV 296
Query: 355 LLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT 414
           L+   GV VDA T+  GY PLH+A   G++ +V  LL   AD+  +  K G + LH AA 
Sbjct: 297 LIKH-GVMVDATTRM-GYTPLHVASHYGNIKLVKFLLQHQADV-NAKTKLGYSPLHQAAQ 353
Query: 415 HGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTL 457
            GH  +V +LL  GA  N     G   +  A R G++ + + L
Sbjct: 354 QGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 396

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  164 bits (416), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 205/416 (49%), Gaps = 43/416 (10%)
Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
           TPL +A+  GH  +V+ L++ GAS    N    T +H+AA+ GH +V + +  +KA    
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 75
Query: 286 SKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAY 345
             K   T LH AA  G  + V+ LL +      ++P         L + +G TPLH+AA 
Sbjct: 76  KAKDDQTPLHCAARIGHTNMVKLLLEN-----NANP--------NLATTAGHTPLHIAAR 122
Query: 346 SGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNG 405
            G+   V  LL     Q  A   + G+ PLH+A   G V V  LLL R A    +A KNG
Sbjct: 123 EGHVETVLALLEKEASQ--ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNG 179
Query: 406 KTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVD 465
            T LH+A  H +L +V++LL +G   ++    G   +H AA+   V +  +LLQ G   +
Sbjct: 180 LTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN 239
Query: 466 ------VTTNNLAC--GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 517
                 VT  +LA   GH  +V LLLS+ A+     +K+G T LH+ A  GH+ + +VL+
Sbjct: 240 AESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLI 298
Query: 518 GQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 577
             G  ++AT                 +R+G T LH+A+  G   L +FL+  H A ++  
Sbjct: 299 KHGVMVDAT-----------------TRMGYTPLHVASHYGNIKLVKFLL-QHQADVNAK 340
Query: 578 TLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
           T    +PLH AA+ G   +  LLL  GAS +     G  P+ +A +  +  V  + 
Sbjct: 341 TKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 396

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 132/270 (48%), Gaps = 30/270 (11%)
Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
           PLH+A F GH+ +V  LL R A    S  K  +T LH+AA  GH ++ + LL   A++NA
Sbjct: 17  PLHVASFMGHLPIVKNLLQRGASPNVSNVKV-ETPLHMAARAGHTEVAKYLLQNKAKVNA 75
Query: 434 TDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN------NLAC--GHV-TVVGLLLS 484
             K     +H AAR GH  ++  LL+     ++ T       ++A   GHV TV+ LL  
Sbjct: 76  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 135
Query: 485 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKS 544
            A+    +  K G T LH+AA +G +++ E+LL + A  NA  K                
Sbjct: 136 EASQACMT--KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKN--------------- 178
Query: 545 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 604
             G T LH+A  +   D+ + L+               TPLH+AA+  Q++V + LL  G
Sbjct: 179 --GLTPLHVAVHHNNLDIVKLLL-PRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG 235
Query: 605 ASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
            S +A   QG  P+H+AAQ    E+  + L
Sbjct: 236 GSANAESVQGVTPLHLAAQEGHAEMVALLL 265

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 499 TCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG 558
           T LH+A+  GHL +V+ LL +GA  N ++   +                 T LH+AA  G
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE-----------------TPLHMAARAG 58
Query: 559 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPI 618
           + ++ ++L+ + A V +      QTPLH AA  G   + KLLL+  A+ +     G  P+
Sbjct: 59  HTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPL 117
Query: 619 HVAAQNNFPEVAQIFLRAHPSLVTATTK 646
           H+AA+    E     L    S    T K
Sbjct: 118 HIAAREGHVETVLALLEKEASQACMTKK 145

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/127 (51%), Positives = 89/127 (70%), Gaps = 3/127 (2%)
Query: 335 SGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRA 394
           +G TPLHLAA +G+  VV+LLL  AG  V+A+ + NG  PLHLA   GH+ VV LLL   
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLEAG 58
Query: 395 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGII 454
           AD + + DKNG+T LH+AA +GHL++V++LL  GA++NA DK G   +H AAR GH+ ++
Sbjct: 59  AD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 117
Query: 455 NTLLQKG 461
             LL+ G
Sbjct: 118 KLLLEAG 124

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score =  113 bits (282), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 91/152 (59%), Gaps = 27/152 (17%)
Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 429
           NG  PLHLA   GH+ VV LLL   AD+  + DKNG+T LH+AA +GHL++V++LL  GA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59
Query: 430 EINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADL 489
           ++NA DK G   +H AAR GH+ ++  LL+ G  V+                        
Sbjct: 60  DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN------------------------ 95
Query: 490 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
             + DKNG+T LH+AA +GHL++V++LL  GA
Sbjct: 96  --AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 87/141 (61%), Gaps = 18/141 (12%)
Query: 496 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAA 555
           NG+T LH+AA +GHL++V++LL  GA++NA DK                  GRT LHLAA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-----------------GRTPLHLAA 43
Query: 556 MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQ 615
            NG+ ++ + L+ +  A ++      +TPLHLAA  G L+V KLLL+ GA ++A D  G+
Sbjct: 44  RNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGR 102
Query: 616 KPIHVAAQNNFPEVAQIFLRA 636
            P+H+AA+N   EV ++ L A
Sbjct: 103 TPLHLAARNGHLEVVKLLLEA 123

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 641
           +TPLHLAA  G L+V KLLL+ GA ++A D  G+ P+H+AA+N   EV ++ L A    V
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-V 61
Query: 642 TATTKEKERAKDLIAAGKHCE--GMATEXXXXXXGADSAGRILTATDRRN--IEFLDVLI 697
            A  K       L A   H E   +  E        D  GR       RN  +E + +L+
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 698 E 698
           E
Sbjct: 122 E 122

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  108 bits (270), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 97/174 (55%), Gaps = 29/174 (16%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           AA +G ++ VR+L+ + G  V+A+ + +GY PLHLA   GH+ +V +LL   AD+  + D
Sbjct: 9   AARAGQDDEVRILM-ANGADVNAKDK-DGYTPLHLAAREGHLEIVEVLLKAGADV-NAKD 65
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGE 462
           K+G T LH+AA  GHL++VEVLL  GA++NA DK G   +H AAR GH+ I+  LL+ G 
Sbjct: 66  KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Query: 463 KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 516
            V+                          + DK GKT   +A   GH  + EVL
Sbjct: 126 DVN--------------------------AQDKFGKTPFDLAIREGHEDIAEVL 153

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 23/166 (13%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + DK+G T LH+AA  GHL++VEVLL  GA++NA DK    
Sbjct: 12  AGQDDEVRILMANGADV-NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKD--- 67
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ--TPLHLAAE 590
                         G T LHLAA  G+ ++   L+    A  D+    K   TPLHLAA 
Sbjct: 68  --------------GYTPLHLAAREGHLEIVEVLLK---AGADVNAKDKDGYTPLHLAAR 110
Query: 591 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 636
            G L++ ++LL  GA ++A D  G+ P  +A +    ++A++  +A
Sbjct: 111 EGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREGHEDIAEVLQKA 156

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
           AA  G  D  R L+  + A ++       TPLHLAA  G L++ ++LL  GA ++A D  
Sbjct: 9   AARAGQDDEVRILMA-NGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKD 67
Query: 614 GQKPIHVAAQNNFPEVAQIFLRA 636
           G  P+H+AA+    E+ ++ L+A
Sbjct: 68  GYTPLHLAAREGHLEIVEVLLKA 90

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score =  107 bits (266), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 30/185 (16%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G   L  AA +G ++ VR+L+ + G  V+A+ + +GY PLHLA   GH+ +V +LL
Sbjct: 11  GSDLGKKLLE-AARAGQDDEVRILM-ANGADVNAKDK-DGYTPLHLAAREGHLEIVEVLL 67
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
              AD+  + DK+G T LH+AA  GHL++VEVLL  GA++NA DK G   +H AAR GH+
Sbjct: 68  KAGADV-NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHL 126
Query: 452 GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ 511
            I+  LL+ G  V                           + DK GKT   I+  +G+  
Sbjct: 127 EIVEVLLKAGADV--------------------------NAQDKFGKTAFDISIDNGNED 160
Query: 512 MVEVL 516
           + E+L
Sbjct: 161 LAEIL 165

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 89.7 bits (221), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 84/178 (47%), Gaps = 43/178 (24%)
Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK  L  AA  G    V +L+  GA++NA DK G   +H AAR GH+ I+  LL+ G  V
Sbjct: 15  GKKLLE-AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADV 73
Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
                                      + DK+G T LH+AA  GHL++VEVLL  GA++N
Sbjct: 74  --------------------------NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 107
Query: 525 ATDK----------------VCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           A DK                + + LL   A +N++ + G+TA  ++  NG  DL   L
Sbjct: 108 AKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 85.9 bits (211), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 23/163 (14%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + DK+G T LH+AA  GHL++VEVLL  GA++NA DK    
Sbjct: 24  AGQDDEVRILMANGADV-NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKD--- 79
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ--TPLHLAAE 590
                         G T LHLAA  G+ ++   L+    A  D+    K   TPLHLAA 
Sbjct: 80  --------------GYTPLHLAAREGHLEIVEVLLK---AGADVNAKDKDGYTPLHLAAR 122
Query: 591 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
            G L++ ++LL  GA ++A D  G+    ++  N   ++A+I 
Sbjct: 123 EGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 603
           S +G+  L  AA  G  D  R L+  + A ++       TPLHLAA  G L++ ++LL  
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMA-NGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKA 69
Query: 604 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKE 647
           GA ++A D  G  P+H+AA+    E+ ++ L+A    V A  K+
Sbjct: 70  GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD-VNAKDKD 112

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  106 bits (264), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 97/174 (55%), Gaps = 29/174 (16%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           AA +G ++ VR+L+ + G  V+A+ + +GY PLHLA   GH+ +V +LL   AD+  + D
Sbjct: 9   AARAGQDDEVRILM-ANGADVNAKDK-DGYTPLHLAAREGHLEIVEVLLKAGADV-NAKD 65
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGE 462
           K+G T LH+AA  GHL++VEVLL  GA++NA DK G   +H AAR GH+ I+  LL+ G 
Sbjct: 66  KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGA 125
Query: 463 KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 516
            V                           + DK GKT   +A  +G+  + EVL
Sbjct: 126 DV--------------------------NAQDKFGKTPFDLAIDNGNEDIAEVL 153

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 89/166 (53%), Gaps = 23/166 (13%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + DK+G T LH+AA  GHL++VEVLL  GA++NA DK    
Sbjct: 12  AGQDDEVRILMANGADV-NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKD--- 67
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ--TPLHLAAE 590
                         G T LHLAA  G+ ++   L+    A  D+    K   TPLHLAA 
Sbjct: 68  --------------GYTPLHLAAREGHLEIVEVLLK---AGADVNAKDKDGYTPLHLAAR 110
Query: 591 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 636
            G L++ ++LL  GA ++A D  G+ P  +A  N   ++A++  +A
Sbjct: 111 EGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGNEDIAEVLQKA 156

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
           AA  G  D  R L+  + A ++       TPLHLAA  G L++ ++LL  GA ++A D  
Sbjct: 9   AARAGQDDEVRILMA-NGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKD 67
Query: 614 GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKE 647
           G  P+H+AA+    E+ ++ L+A    V A  K+
Sbjct: 68  GYTPLHLAAREGHLEIVEVLLKAGAD-VNAKDKD 100

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score =  103 bits (256), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 100/179 (55%), Gaps = 29/179 (16%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           AA +GN++ V+ LL + G  V+A +  +G  PLHLA   GH  VV LLLS+ AD   + D
Sbjct: 11  AAENGNKDRVKDLLEN-GADVNA-SDSDGKTPLHLAAENGHKEVVKLLLSQGAD-PNAKD 67
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGE 462
            +GKT LH+AA +GH ++V++LL QGA+ NA D  G   +H AA                
Sbjct: 68  SDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAEN-------------- 113
Query: 463 KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
                      GH  VV LLLS+ AD   ++D +G+T L +A  HG+ ++V++L  QG 
Sbjct: 114 -----------GHKEVVKLLLSQGAD-PNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 19/162 (11%)
Query: 474 GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDAL 533
           G+   V  LL   AD+  ++D +GKT LH+AA +GH ++V++LL QGA+ NA D      
Sbjct: 15  GNKDRVKDLLENGADV-NASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKD------ 67
Query: 534 LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 593
                        G+T LHLAA NG+ ++ + L+    A  +      +TPLHLAAE G 
Sbjct: 68  -----------SDGKTPLHLAAENGHKEVVKLLLS-QGADPNAKDSDGKTPLHLAAENGH 115
Query: 594 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            +V KLLL  GA  + +D  G+ P+ +A ++   EV ++  +
Sbjct: 116 KEVVKLLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEK 157

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 30/185 (16%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G   L  AA +G ++ VR+L+ + G  V+A T  +GY PLHLA   GH+ +V +LL
Sbjct: 11  GSDLGKKLLE-AARAGQDDEVRILM-ANGADVNA-TDNDGYTPLHLAASNGHLEIVEVLL 67
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
              AD + ++D  G T LH+AA  GHL++VEVLL  GA++NA D  G   +H AA+YGH+
Sbjct: 68  KNGAD-VNASDLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHL 126
Query: 452 GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ 511
            I+  LL+ G  V                           + DK GKT   I+  +G+  
Sbjct: 127 EIVEVLLKHGADV--------------------------NAQDKFGKTAFDISIDNGNED 160
Query: 512 MVEVL 516
           + E+L
Sbjct: 161 LAEIL 165

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 97/189 (51%), Gaps = 44/189 (23%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           A   G    V +L++  AD+  + D +G T LH+AA++GHL++VEVLL  GA++NA+D  
Sbjct: 21  AARAGQDDEVRILMANGADV-NATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLT 79
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G   +H AA                         A GH+ +V +LL   AD+  + D +G
Sbjct: 80  GITPLHLAA-------------------------ATGHLEIVEVLLKHGADV-NAYDNDG 113
Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
            T LH+AA +GHL++VEVLL  GA++NA DK                  G+TA  ++  N
Sbjct: 114 HTPLHLAAKYGHLEIVEVLLKHGADVNAQDK-----------------FGKTAFDISIDN 156
Query: 558 GYADLCRFL 566
           G  DL   L
Sbjct: 157 GNEDLAEIL 165

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 19/161 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + D +G T LH+AA++GHL++VEVLL  GA++NA+D     
Sbjct: 24  AGQDDEVRILMANGADV-NATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASD----- 77
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
            LT           G T LHLAA  G+ ++   L+  H A ++       TPLHLAA+ G
Sbjct: 78  -LT-----------GITPLHLAAATGHLEIVEVLLK-HGADVNAYDNDGHTPLHLAAKYG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I 
Sbjct: 125 HLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 30/185 (16%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G   L  AA +G ++ VR+L+ + G  V+A+  ++G  PLHLA   GH+ +V +LL
Sbjct: 11  GSDLGKKLLE-AARAGQDDEVRILM-ANGADVNAE-DDSGKTPLHLAAIKGHLEIVEVLL 67
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
              AD + +ADK G T LH+AA +GHL++VEVLL  GA++NATD  G   +H AA  GH+
Sbjct: 68  KHGAD-VNAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHL 126
Query: 452 GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ 511
            I+  LL+ G  V                           + DK GKT   I+  +G+  
Sbjct: 127 EIVEVLLKYGADV--------------------------NAQDKFGKTAFDISIDNGNED 160
Query: 512 MVEVL 516
           + E+L
Sbjct: 161 LAEIL 165

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 19/163 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + D +GKT LH+AA  GHL++VEVLL  GA++NA DK    
Sbjct: 24  AGQDDEVRILMANGADV-NAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADK---- 78
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                        +G T LHLAA+ G+ ++   L+  + A ++       TPLHLAA+AG
Sbjct: 79  -------------MGDTPLHLAALYGHLEIVEVLLK-NGADVNATDTYGFTPLHLAADAG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I  +
Sbjct: 125 HLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/185 (38%), Positives = 101/185 (54%), Gaps = 18/185 (9%)
Query: 276 MRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSES 335
           MR S   + +   LG   L  AA  GQ D VR L+++      +D              +
Sbjct: 1   MRGSHHHHHHGSDLGRKLLE-AARAGQDDEVRILMANGADVNAAD-------------NT 46
Query: 336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAA 395
           G TPLHLAAYSG+  +V +LL   G  VDA +   GY PLHLA + GH+ +V +LL   A
Sbjct: 47  GTTPLHLAAYSGHLEIVEVLLKH-GADVDA-SDVFGYTPLHLAAYWGHLEIVEVLLKNGA 104
Query: 396 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIIN 455
           D + + D +G T LH+AA  G+L++VEVLL  GA++NA DK G  +   +   G+  +  
Sbjct: 105 D-VNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLA- 162
Query: 456 TLLQK 460
            +LQK
Sbjct: 163 EILQK 167

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 94/189 (49%), Gaps = 44/189 (23%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           A   G    V +L++  AD+  +AD  G T LH+AA  GHL++VEVLL  GA+++A+D  
Sbjct: 21  AARAGQDDEVRILMANGADV-NAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVF 79
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G   +H AA +GH+ I+  LL+ G  V+                          + D +G
Sbjct: 80  GYTPLHLAAYWGHLEIVEVLLKNGADVN--------------------------AMDSDG 113
Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
            T LH+AA  G+L++VEVLL  GA++NA DK                  G+TA  ++  N
Sbjct: 114 MTPLHLAAKWGYLEIVEVLLKHGADVNAQDK-----------------FGKTAFDISIDN 156
Query: 558 GYADLCRFL 566
           G  DL   L
Sbjct: 157 GNEDLAEIL 165

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 83.2 bits (204), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 19/163 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  +AD  G T LH+AA  GHL++VEVLL  GA+++A+D     
Sbjct: 24  AGQDDEVRILMANGADV-NAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASD----- 77
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T LHLAA  G+ ++   L+  + A ++ +     TPLHLAA+ G
Sbjct: 78  ------------VFGYTPLHLAAYWGHLEIVEVLLK-NGADVNAMDSDGMTPLHLAAKWG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I  +
Sbjct: 125 YLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 94/189 (49%), Gaps = 44/189 (23%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           A   G    V +L++  AD+  +AD  G T LH+AA  GHL++VEVLL  GA++NA D  
Sbjct: 21  AARAGRDDEVRILMANGADV-NAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTL 79
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G+  +H AA +GH+ I+  LL+ G  V+                          + D NG
Sbjct: 80  GSTPLHLAAHFGHLEIVEVLLKNGADVN--------------------------AKDDNG 113
Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
            T LH+AA  GHL++VEVLL  GA++NA DK                  G+TA  ++  N
Sbjct: 114 ITPLHLAANRGHLEIVEVLLKYGADVNAQDK-----------------FGKTAFDISINN 156
Query: 558 GYADLCRFL 566
           G  DL   L
Sbjct: 157 GNEDLAEIL 165

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  +AD  G T LH+AA  GHL++VEVLL  GA++NA D +   
Sbjct: 24  AGRDDEVRILMANGADV-NAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTL--- 79
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T LHLAA  G+ ++   L+ +  A ++       TPLHLAA  G
Sbjct: 80  --------------GSTPLHLAAHFGHLEIVEVLLKN-GADVNAKDDNGITPLHLAANRG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I  +
Sbjct: 125 HLEIVEVLLKYGADVNAQDKFGKTAFDISINNGNEDLAEILQK 167

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 97.8 bits (242), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Query: 25  LLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS 84
           L+ A   G+ + V  ++ N A V+  D +GR+ LH AAE+G+ +V   L++  A +N+K 
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD 67
Query: 85  RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 144
             GRT LH AA NG+ ++ + L+    A ++      +TPLH AAE G  +V KLL+  G
Sbjct: 68  SDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG 126
Query: 145 ASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 175
           A ++ +D  G+ P+ +A ++   EV ++  +
Sbjct: 127 ADVNTSDSDGRTPLDLAREHGNEEVVKLLEK 157

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 96.3 bits (238), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 101/179 (56%), Gaps = 29/179 (16%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           AA +GN++ V+ L+ + G  V+A +  +G  PLH A   GH  VV LL+S+ AD + + D
Sbjct: 11  AAENGNKDRVKDLIEN-GADVNA-SDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKD 67
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGE 462
            +G+T LH AA +GH ++V++L+ +GA++NA D  G   +H AA  G             
Sbjct: 68  SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG------------- 114
Query: 463 KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
                       H  VV LL+S+ AD + ++D +G+T L +A  HG+ ++V++L  QG 
Sbjct: 115 ------------HKEVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 87.0 bits (214), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 19/162 (11%)
Query: 474 GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDAL 533
           G+   V  L+   AD+  ++D +G+T LH AA +GH ++V++L+ +GA++NA D      
Sbjct: 15  GNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD---- 69
Query: 534 LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 593
                        GRT LH AA NG+ ++ + L+    A ++      +TPLH AAE G 
Sbjct: 70  -------------GRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGH 115
Query: 594 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            +V KLL+  GA ++ +D  G+ P+ +A ++   EV ++  +
Sbjct: 116 KEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEK 157

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 30/185 (16%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G   L  AA +G ++ VR+L+ + G  V+A+   +G+ PLHLA F GH+ +V +LL
Sbjct: 11  GSDLGKKLLE-AARAGRDDEVRILM-ANGADVNAEDA-SGWTPLHLAAFNGHLEIVEVLL 67
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
              AD + + D  G T L +AA  GHL++VEVLL  GA++NA D  G   +H AA +GH+
Sbjct: 68  KNGAD-VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHL 126
Query: 452 GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ 511
            I+  LL+ G  V+                          + DK GKT   I+  +G+  
Sbjct: 127 EIVEVLLKNGADVN--------------------------AQDKFGKTAFDISIDNGNED 160
Query: 512 MVEVL 516
           + E+L
Sbjct: 161 LAEIL 165

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 92/189 (48%), Gaps = 44/189 (23%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           A   G    V +L++  AD+  + D +G T LH+AA +GHL++VEVLL  GA++NA D  
Sbjct: 21  AARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHA 79
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G   +  AA +GH+ I+  LL+ G   DV  N                        D  G
Sbjct: 80  GMTPLRLAALFGHLEIVEVLLKNG--ADVNAN------------------------DMEG 113
Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
            T LH+AA  GHL++VEVLL  GA++NA DK                  G+TA  ++  N
Sbjct: 114 HTPLHLAAMFGHLEIVEVLLKNGADVNAQDK-----------------FGKTAFDISIDN 156
Query: 558 GYADLCRFL 566
           G  DL   L
Sbjct: 157 GNEDLAEIL 165

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 80.1 bits (196), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 19/163 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + D +G T LH+AA +GHL++VEVLL  GA++NA D     
Sbjct: 24  AGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD----- 77
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T L LAA+ G+ ++   L+ +  A ++   +   TPLHLAA  G
Sbjct: 78  ------------HAGMTPLRLAALFGHLEIVEVLLKN-GADVNANDMEGHTPLHLAAMFG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I  +
Sbjct: 125 HLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 96.7 bits (239), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 93/189 (49%), Gaps = 44/189 (23%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           A   G    V +L++  AD+  + D  G T LH+AA  GHL++VEVLL  GA++NA D  
Sbjct: 21  AARAGQDDEVRILMANGADV-NARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSL 79
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G   +H AAR GH+ I+  LL+ G  V+                          ++D +G
Sbjct: 80  GVTPLHLAARRGHLEIVEVLLKNGADVN--------------------------ASDSHG 113
Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
            T LH+AA  GHL++VEVLL  GA++NA DK                  G+TA  ++  N
Sbjct: 114 FTPLHLAAKRGHLEIVEVLLKNGADVNAQDK-----------------FGKTAFDISIDN 156
Query: 558 GYADLCRFL 566
           G  DL   L
Sbjct: 157 GNEDLAEIL 165

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + D  G T LH+AA  GHL++VEVLL  GA++NA D +   
Sbjct: 24  AGQDDEVRILMANGADV-NARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSL--- 79
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T LHLAA  G+ ++   L+ +  A ++       TPLHLAA+ G
Sbjct: 80  --------------GVTPLHLAARRGHLEIVEVLLKN-GADVNASDSHGFTPLHLAAKRG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I  +
Sbjct: 125 HLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 96.3 bits (238), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 60/179 (33%), Positives = 99/179 (55%), Gaps = 29/179 (16%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           AA +GN++ V+ L+ + G  V+A +  +G  PLH A   GH  +V LL+S+ AD + + D
Sbjct: 11  AAENGNKDRVKDLIEN-GADVNA-SDSDGRTPLHYAAKEGHKEIVKLLISKGAD-VNAKD 67
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGE 462
            +G+T LH AA  GH ++V++L+ +GA++NA D  G   +H AA+ GH  I+  L+ KG 
Sbjct: 68  SDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGA 127
Query: 463 KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
            V+                          ++D +G+T L +A  HG+ ++V++L  QG 
Sbjct: 128 DVN--------------------------TSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/152 (30%), Positives = 83/152 (54%), Gaps = 19/152 (12%)
Query: 482 LLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFIN 541
           L+   AD+  ++D +G+T LH AA  GH ++V++L+ +GA++NA D              
Sbjct: 23  LIENGADV-NASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSD------------ 69
Query: 542 SKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 601
                GRT LH AA  G+ ++ + L+    A ++      +TPLH AA+ G  ++ KLL+
Sbjct: 70  -----GRTPLHYAAKEGHKEIVKLLI-SKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLI 123
Query: 602 DLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
             GA ++ +D  G+ P+ +A ++   E+ ++ 
Sbjct: 124 SKGADVNTSDSDGRTPLDLAREHGNEEIVKLL 155

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 92/189 (48%), Gaps = 44/189 (23%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           A   G    V +L++  AD+  ++D  G T LH+AA  GHL++VEVLL  GA++NA D  
Sbjct: 21  AARAGQDDEVRILMANGADV-NASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSL 79
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G   +H AA  GH+ ++  LL+ G   DV  N                        D NG
Sbjct: 80  GVTPLHLAADRGHLEVVEVLLKNG--ADVNAN------------------------DHNG 113
Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
            T LH+AA  GHL++VEVLL  GA++NA DK                  G+TA  ++  N
Sbjct: 114 FTPLHLAANIGHLEIVEVLLKHGADVNAQDK-----------------FGKTAFDISIDN 156
Query: 558 GYADLCRFL 566
           G  DL   L
Sbjct: 157 GNEDLAEIL 165

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  ++D  G T LH+AA  GHL++VEVLL  GA++NA D +   
Sbjct: 24  AGQDDEVRILMANGADV-NASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSL--- 79
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T LHLAA  G+ ++   L+ +  A ++       TPLHLAA  G
Sbjct: 80  --------------GVTPLHLAADRGHLEVVEVLLKN-GADVNANDHNGFTPLHLAANIG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I  +
Sbjct: 125 HLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 91/189 (48%), Gaps = 44/189 (23%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           A   G    V +L++  AD+  + D  G T LH+AA  GHL++VEVLL  GA++NA D  
Sbjct: 21  AARAGQDDEVRILMANGADV-NAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFS 79
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G+  +H AA+ GH+ I+  LL+ G  V                           + D  G
Sbjct: 80  GSTPLHLAAKRGHLEIVEVLLKYGADV--------------------------NADDTIG 113
Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
            T LH+AA  GHL++VEVLL  GA++NA DK                  G+TA  ++  N
Sbjct: 114 STPLHLAADTGHLEIVEVLLKYGADVNAQDK-----------------FGKTAFDISIDN 156
Query: 558 GYADLCRFL 566
           G  DL   L
Sbjct: 157 GNEDLAEIL 165

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 19/161 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + D  G T LH+AA  GHL++VEVLL  GA++NA D     
Sbjct: 24  AGQDDEVRILMANGADV-NAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALD----- 77
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T LHLAA  G+ ++   L+  + A ++       TPLHLAA+ G
Sbjct: 78  ------------FSGSTPLHLAAKRGHLEIVEVLLK-YGADVNADDTIGSTPLHLAADTG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I 
Sbjct: 125 HLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 93.6 bits (231), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 153/339 (45%), Gaps = 40/339 (11%)
Query: 25  LLIACNRGHMELVNTMLNNHARVDVFDQEGRSA--LHLAAEHGYLKVCDALLTHKAFINS 82
           LL A   G+ E +  +L     V+    +GR +  LHLAA +  +++   LL H A +++
Sbjct: 28  LLEAARSGNEEKLMALLTP-LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHA 86
Query: 83  KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 142
           K + G   LH A   G+ ++   L+  H A ++ + L + TPLH AA   +++VC LLL 
Sbjct: 87  KDKGGLVPLHNACSYGHYEVTELLL-KHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLS 145
Query: 143 LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVG 202
            GA     +  G+  + +A      E      + H  L  A   D      +A ++ ++ 
Sbjct: 146 HGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREAD------LAKVKKTLA 199
Query: 203 VIEELMKFDRSGVISARNRVTEATPLQLAAEGGHAN---VVRVLVKAGASCTDENKTGFT 259
           +  E++ F        +   +  T L  A    H     V  +L++ GA+  ++NK   T
Sbjct: 200 L--EIINF--------KQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMT 249
Query: 260 AVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKS 319
            +H+AA+  HN V+E +    A       LG TALH AA  G   T R LLS+      S
Sbjct: 250 PLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSY-----GS 304
Query: 320 DPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNS 358
           DP         + S  G T    AA  GNE V ++L  S
Sbjct: 305 DP--------SIISLQGFT----AAQMGNEAVQQILSES 331

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 143/368 (38%), Gaps = 93/368 (25%)
Query: 319 SDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLA 378
           +DP   A   GE   +  +     AA SGNE  +  LL                 PL++ 
Sbjct: 11  ADPSAKAVLTGEYKKDELLE----AARSGNEEKLMALLT----------------PLNVN 50
Query: 379 CFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGG 438
           C                    ++D    T LH+AA +  +++V++LL  GA+++A DKGG
Sbjct: 51  C-------------------HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGG 91
Query: 439 ARSIHTAARYGHVGIINTLLQKGEKVDVTT--------NNLACGHVTVVGLLLSRAADLL 490
              +H A  YGH  +   LL+ G  V+              +   V V  LLLS  AD  
Sbjct: 92  LVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD-P 150
Query: 491 QSADKNGKTCLHIAAT-----------HGH-------------------LQMVEVLLGQG 520
              + +GK+ + +A T            GH                   L+++     Q 
Sbjct: 151 TLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS 210
Query: 521 AEI----------NATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH 570
            E               +V + LL   A +N K++   T LH+AA   + D+   L H H
Sbjct: 211 HETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVL-HKH 269
Query: 571 AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA 630
            A ++ L    QT LH AA AG LQ C+LLL  G+       QG      AAQ     V 
Sbjct: 270 GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQG----FTAAQMGNEAVQ 325
Query: 631 QIFLRAHP 638
           QI   + P
Sbjct: 326 QILSESTP 333

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 492 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTAL 551
           ++D    T LH+AA +  +++V++LL  GA+++A DK                  G   L
Sbjct: 53  ASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG-----------------GLVPL 95
Query: 552 HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD 611
           H A   G+ ++   L+  H A ++ + L + TPLH AA   +++VC LLL  GA     +
Sbjct: 96  HNACSYGHYEVTELLL-KHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVN 154
Query: 612 DQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIA 656
             G+  + +A      E      + H  L  A   +  + K  +A
Sbjct: 155 CHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLA 199

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 98/185 (52%), Gaps = 30/185 (16%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G   L  AA +G ++ VR+L+ + G  V+A     G  PLHL    GH+ ++ +LL
Sbjct: 11  GSDLGKKLLE-AARAGQDDEVRILM-ANGADVNANDW-FGITPLHLVVNNGHLEIIEVLL 67
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
             AAD+  ++DK+G T LH+AA  GHL++VEVLL  GA++NA D  G   +H AA  GH+
Sbjct: 68  KYAADV-NASDKSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHL 126
Query: 452 GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ 511
            I+  LL+ G  V+                          + DK GKT   I+  +G+  
Sbjct: 127 EIVEVLLKYGADVN--------------------------AQDKFGKTAFDISIDNGNED 160
Query: 512 MVEVL 516
           + E+L
Sbjct: 161 LAEIL 165

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 19/163 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + D  G T LH+   +GHL+++EVLL   A++NA+DK    
Sbjct: 24  AGQDDEVRILMANGADV-NANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKS--- 79
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T LHLAA  G+ ++   L+  + A ++ +  +  TPLHLAAE G
Sbjct: 80  --------------GWTPLHLAAYRGHLEIVEVLLK-YGADVNAMDYQGYTPLHLAAEDG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I  +
Sbjct: 125 HLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 92/175 (52%), Gaps = 17/175 (9%)
Query: 276 MRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSES 335
           MR S   + +   LG   L  AA  GQ D VR L+++       D              +
Sbjct: 1   MRGSHHHHHHGSDLGKKLLE-AARAGQDDEVRILIANGADVNAVD-------------NT 46
Query: 336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAA 395
           G+TPLHLAA SG+  +V +LL   G  VDA     G+ PLHLA   GH+ +V +LL   A
Sbjct: 47  GLTPLHLAAVSGHLEIVEVLLKH-GADVDA-ADVYGFTPLHLAAMTGHLEIVEVLLKYGA 104
Query: 396 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGH 450
           D+  + D  G T LH+AA  GHL++VEVLL  GA++NA DK G  +   +   G+
Sbjct: 105 DV-NAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGN 158

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 90.1 bits (222), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 89/187 (47%), Gaps = 44/187 (23%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           A   G    V +L++  AD+  + D  G T LH+AA  GHL++VEVLL  GA+++A D  
Sbjct: 21  AARAGQDDEVRILIANGADV-NAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVY 79
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G   +H AA  GH+ I+  LL+ G  V                           + D  G
Sbjct: 80  GFTPLHLAAMTGHLEIVEVLLKYGADV--------------------------NAFDMTG 113
Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
            T LH+AA  GHL++VEVLL  GA++NA DK                  G+TA  ++  N
Sbjct: 114 STPLHLAADEGHLEIVEVLLKYGADVNAQDK-----------------FGKTAFDISIDN 156
Query: 558 GYADLCR 564
           G  DL +
Sbjct: 157 GNEDLAK 163

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 19/159 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + D  G T LH+AA  GHL++VEVLL  GA+++A D     
Sbjct: 24  AGQDDEVRILIANGADV-NAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAAD----- 77
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T LHLAAM G+ ++   L+  + A ++   +   TPLHLAA+ G
Sbjct: 78  ------------VYGFTPLHLAAMTGHLEIVEVLLK-YGADVNAFDMTGSTPLHLAADEG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQ 631
            L++ ++LL  GA ++A D  G+    ++  N   ++A+
Sbjct: 125 HLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAK 163

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 429
           NG  PLHLA   GH+ VV LLL   AD+  + DKNG+T LH+AA +GHL++V++LL  GA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59
Query: 430 EINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           ++NA DK G   +H AAR GH+ ++  LL+ G
Sbjct: 60  DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 70/118 (59%), Gaps = 26/118 (22%)
Query: 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
           NG+T LH+AA +GHL++V++LL  GA++NA DK G   +H AAR GH+ ++  LL+ G  
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 464 VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
           V+                          + DKNG+T LH+AA +GHL++V++LL  GA
Sbjct: 61  VN--------------------------AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 18/110 (16%)
Query: 496 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAA 555
           NG+T LH+AA +GHL++V++LL  GA++NA DK                  GRT LHLAA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-----------------NGRTPLHLAA 43
Query: 556 MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA 605
            NG+ ++ + L+ +  A ++      +TPLHLAA  G L+V KLLL+ GA
Sbjct: 44  RNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 547 GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
           GRT LHLAA NG+ ++ + L+ +  A ++      +TPLHLAA  G L+V KLLL+ GA 
Sbjct: 2   GRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 607 IDATDDQGQKPIHVAAQNNFPEVAQIFLRA 636
           ++A D  G+ P+H+AA+N   EV ++ L A
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 641
           +TPLHLAA  G L+V KLLL+ GA ++A D  G+ P+H+AA+N   EV ++ L A    V
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-V 61
Query: 642 TATTKEKERAKDLIAAGKHCE 662
            A  K       L A   H E
Sbjct: 62  NAKDKNGRTPLHLAARNGHLE 82

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 91/189 (48%), Gaps = 44/189 (23%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           A   G    V +L++  AD+  + D  G T LH+AA  GHL++VEVLL  GA++NA D  
Sbjct: 21  AARAGQDDEVRILMANGADV-NATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNY 79
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           GA  +H AA  GH+ I+  LL+ G  V+                          + D  G
Sbjct: 80  GATPLHLAADNGHLEIVEVLLKHGADVN--------------------------AKDYEG 113
Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
            T LH+AA  GHL++VEVLL  GA++NA DK                  G+TA  ++  N
Sbjct: 114 FTPLHLAAYDGHLEIVEVLLKYGADVNAQDK-----------------FGKTAFDISIDN 156
Query: 558 GYADLCRFL 566
           G  DL   L
Sbjct: 157 GNEDLAEIL 165

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + D  G T LH+AA  GHL++VEVLL  GA++NA D     
Sbjct: 24  AGQDDEVRILMANGADV-NATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWD----- 77
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T LHLAA NG+ ++   L+  H A ++       TPLHLAA  G
Sbjct: 78  ------------NYGATPLHLAADNGHLEIVEVLLK-HGADVNAKDYEGFTPLHLAAYDG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I  +
Sbjct: 125 HLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 603
           S +G+  L  AA  G  D  R L+ +  A ++       TPLHLAA+ G L++ ++LL  
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMAN-GADVNATDWLGHTPLHLAAKTGHLEIVEVLLKY 69
Query: 604 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEG 663
           GA ++A D+ G  P+H+AA N   E+ ++ L+ H + V A   E      L A   H E 
Sbjct: 70  GADVNAWDNYGATPLHLAADNGHLEIVEVLLK-HGADVNAKDYEGFTPLHLAAYDGHLEI 128
Query: 664 MATEXXXXXXGADSAGRILTATDRRNIEFLDVLIENEQKEV 704
           +         GAD     + A D+      D+ I+N  +++
Sbjct: 129 VEV---LLKYGAD-----VNAQDKFGKTAFDISIDNGNEDL 161

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 98/185 (52%), Gaps = 30/185 (16%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G   L  AA +G ++ VR+L+ + G  V+A   + G  PLHLA + GH  +V +LL
Sbjct: 11  GSDLGKKLLE-AARAGQDDEVRILM-ANGADVNAHDDQ-GSTPLHLAAWIGHPEIVEVLL 67
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
              AD+  + D +G T LH+AA +GHL++VEVLL  GA++NA D  G   +H AA  GH+
Sbjct: 68  KHGADV-NARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHL 126
Query: 452 GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ 511
            I+  LL+ G  V+                          + DK GKT   I+  +G+  
Sbjct: 127 EIVEVLLKHGADVN--------------------------AQDKFGKTAFDISIDNGNED 160
Query: 512 MVEVL 516
           + E+L
Sbjct: 161 LAEIL 165

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 89.4 bits (220), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 89/189 (47%), Gaps = 44/189 (23%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           A   G    V +L++  AD+  + D  G T LH+AA  GH ++VEVLL  GA++NA D  
Sbjct: 21  AARAGQDDEVRILMANGADV-NAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTD 79
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G   +H AA  GH+ I+  LL+ G  V+                          + D  G
Sbjct: 80  GWTPLHLAADNGHLEIVEVLLKYGADVN--------------------------AQDAYG 113
Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
            T LH+AA  GHL++VEVLL  GA++NA DK                  G+TA  ++  N
Sbjct: 114 LTPLHLAADRGHLEIVEVLLKHGADVNAQDK-----------------FGKTAFDISIDN 156
Query: 558 GYADLCRFL 566
           G  DL   L
Sbjct: 157 GNEDLAEIL 165

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + D  G T LH+AA  GH ++VEVLL  GA++NA D     
Sbjct: 24  AGQDDEVRILMANGADV-NAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTD--- 79
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T LHLAA NG+ ++   L+  + A ++       TPLHLAA+ G
Sbjct: 80  --------------GWTPLHLAADNGHLEIVEVLLK-YGADVNAQDAYGLTPLHLAADRG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I  +
Sbjct: 125 HLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 29/179 (16%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           AA +GN++ V+ LL + G   +A +  +G  PLH A   GH  +V LLLS+ AD   + D
Sbjct: 11  AAENGNKDRVKDLLEN-GADPNA-SDSDGRTPLHYAAENGHKEIVKLLLSKGAD-PNAKD 67
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGE 462
            +G+T LH AA +GH ++V++LL +GA+ NA D  G   +H AA  GH  I+        
Sbjct: 68  SDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVK------- 120
Query: 463 KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
                             LLLS+ AD   ++D +G+T L +A  HG+ ++V++L  QG 
Sbjct: 121 ------------------LLLSKGAD-PNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 24/155 (15%)
Query: 485 RAADLLQ------SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKA 538
           R  DLL+      ++D +G+T LH AA +GH ++V++LL +GA+ NA D           
Sbjct: 19  RVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSD--------- 69
Query: 539 FINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCK 598
                   GRT LH AA NG+ ++ + L+    A  +      +TPLH AAE G  ++ K
Sbjct: 70  --------GRTPLHYAAENGHKEIVKLLL-SKGADPNAKDSDGRTPLHYAAENGHKEIVK 120
Query: 599 LLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
           LLL  GA  + +D  G+ P+ +A ++   E+ ++ 
Sbjct: 121 LLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLL 155

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 88/170 (51%), Gaps = 27/170 (15%)
Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK  L  AA  G    V +L+  GA++NATD  G   +H AA YGH+ I+  LL+ G  V
Sbjct: 15  GKKLLE-AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADV 73
Query: 465 DV------TTNNLAC--GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 516
           +       T  +LA   GH+ +V +LL   AD+  + D  G T LH+AA  GHL++VEVL
Sbjct: 74  NAIDIMGSTPLHLAALIGHLEIVEVLLKHGADV-NAVDTWGDTPLHLAAIMGHLEIVEVL 132
Query: 517 LGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           L  GA++NA DK                  G+TA  ++  NG  DL   L
Sbjct: 133 LKHGADVNAQDK-----------------FGKTAFDISIDNGNEDLAEIL 165

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 19/163 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + D +G T LH+AAT+GHL++VEVLL  GA++NA D     
Sbjct: 24  AGQDDEVRILMANGADV-NATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID----- 77
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                        +G T LHLAA+ G+ ++   L+  H A ++ +     TPLHLAA  G
Sbjct: 78  ------------IMGSTPLHLAALIGHLEIVEVLLK-HGADVNAVDTWGDTPLHLAAIMG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I  +
Sbjct: 125 HLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 30/185 (16%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G   L  AA +G ++ VR+L+ + G  V+A T  +G  PLHLA   GH+ +V +LL
Sbjct: 11  GSDLGKKLLE-AARAGQDDEVRILM-ANGADVNA-TDASGLTPLHLAATYGHLEIVEVLL 67
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
              AD + + D  G T LH+AA  GHL++VEVLL  GA++NA D  G   +H AA  GH+
Sbjct: 68  KHGAD-VNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHL 126
Query: 452 GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ 511
            I+  LL+ G  V+                          + DK GKT   I+  +G+  
Sbjct: 127 EIVEVLLKHGADVN--------------------------AQDKFGKTAFDISIDNGNED 160
Query: 512 MVEVL 516
           + E+L
Sbjct: 161 LAEIL 165

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 86.3 bits (212), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 89/163 (54%), Gaps = 19/163 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + D +G T LH+AAT+GHL++VEVLL  GA++NA D     
Sbjct: 24  AGQDDEVRILMANGADV-NATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID----- 77
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T LHLAA+ G+ ++   L+  H A ++ +     TPLHLAA  G
Sbjct: 78  ------------IXGSTPLHLAALIGHLEIVEVLLK-HGADVNAVDTWGDTPLHLAAIMG 124
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            L++ ++LL  GA ++A D  G+    ++  N   ++A+I  +
Sbjct: 125 HLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 89.4 bits (220), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/123 (43%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           AA +G ++ VR+L+ + G  V+A T +NG  PLHLA   G + +V +LL   AD + ++D
Sbjct: 13  AAAAGQDDEVRILM-ANGADVNA-TDDNGLTPLHLAAANGQLEIVEVLLKNGAD-VNASD 69
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGE 462
             G T LH+AA  GHL++VEVLL  GA++NA D+ G   +H AA  G + I+  LL+ G 
Sbjct: 70  SAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGA 129
Query: 463 KVD 465
            V+
Sbjct: 130 DVN 132

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 90/189 (47%), Gaps = 44/189 (23%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           A   G    V +L++  AD+  + D NG T LH+AA +G L++VEVLL  GA++NA+D  
Sbjct: 13  AAAAGQDDEVRILMANGADV-NATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSA 71
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G   +H AA  GH+ I+  LL+ G  V+                          + D+ G
Sbjct: 72  GITPLHLAAYDGHLEIVEVLLKHGADVN--------------------------AYDRAG 105
Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
            T LH+AA  G L++VEVLL  GA++NA D                  +G TA  ++   
Sbjct: 106 WTPLHLAALSGQLEIVEVLLKHGADVNAQDA-----------------LGLTAFDISINQ 148
Query: 558 GYADLCRFL 566
           G  DL   L
Sbjct: 149 GQEDLAEIL 157

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 19/162 (11%)
Query: 472 ACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCD 531
           A G    V +L++  AD+  + D NG T LH+AA +G L++VEVLL  GA++NA+D    
Sbjct: 15  AAGQDDEVRILMANGADV-NATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDS--- 70
Query: 532 ALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEA 591
                          G T LHLAA +G+ ++   L+  H A ++       TPLHLAA +
Sbjct: 71  --------------AGITPLHLAAYDGHLEIVEVLLK-HGADVNAYDRAGWTPLHLAALS 115
Query: 592 GQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
           GQL++ ++LL  GA ++A D  G     ++      ++A+I 
Sbjct: 116 GQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQEDLAEIL 157

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 89.4 bits (220), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 36/292 (12%)
Query: 348 NENV--VRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNG 405
           NE+V  V+ LL   G  V+ Q +E G+ PLH A       +V LLL   AD +    KNG
Sbjct: 35  NEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRK-KNG 92
Query: 406 KTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVD 465
            T   +AA  G ++++++ L +GA++N  D  G  +   AA YG V  +  L ++G  V+
Sbjct: 93  ATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN 152
Query: 466 VTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ-GAEIN 524
                           L  +  +  +   K G T L  AA  GH++++++LL + GA++N
Sbjct: 153 ----------------LRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 196
Query: 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTP 584
           A D +    L H    +  S V              +    L+ DH A +++   R +TP
Sbjct: 197 ACDNMGRNALIHALLSSDDSDV--------------EAITHLLLDHGADVNVRGERGKTP 242
Query: 585 LHLAAEAGQLQVCKLLLDLG-ASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
           L LA E   L + + LL+     I+ TD  G+  + +A +    ++A++  +
Sbjct: 243 LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK 294

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 138/296 (46%), Gaps = 36/296 (12%)
Query: 348 NENV--VRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNG 405
           NE+V  V+ LL   G  V+ Q +E G+ PLH A       +V LLL   AD +    KNG
Sbjct: 15  NEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRK-KNG 72
Query: 406 KTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVD 465
            T   +AA  G ++++++ L +GA++N  D  G  +   AA YG V  +  L ++G  V+
Sbjct: 73  ATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN 132
Query: 466 VTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ-GAEIN 524
                           L  +  +  +   K G T L  AA  GH++++++LL + GA++N
Sbjct: 133 ----------------LRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 176
Query: 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTP 584
           A D +    L H    +  S V              +    L+ DH A +++   R +TP
Sbjct: 177 ACDNMGRNALIHALLSSDDSDV--------------EAITHLLLDHGADVNVRGERGKTP 222
Query: 585 LHLAAEAGQLQVCKLLLDLG-ASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 639
           L LA E   L + + LL+     I+ TD  G+  + +A +    ++A++  +   S
Sbjct: 223 LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 31/175 (17%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQEN-GYNPLHLACFGGHVTVVGLLLSRAADLLQSA 401
           AA +G ++ VR+L+ +     DA   ++ G  PLH+A   GH+ +V +LL   AD+  + 
Sbjct: 9   AARAGQDDEVRILMANG---ADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADV-NAV 64
Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           D NG T LH+AA+ GHL++VEVLL  GA++NA D  G   ++ AA +GH+ I+  LL+ G
Sbjct: 65  DTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHG 124
Query: 462 EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 516
             V+                          + DK GKT   I+   G+  + E+L
Sbjct: 125 ADVN--------------------------AQDKFGKTAFDISIDIGNEDLAEIL 153

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 43/178 (24%)
Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK  L  AA  G    V +L+  GA+ NA D  G   +H AA                  
Sbjct: 3   GKKLLE-AARAGQDDEVRILMANGADANAYDHYGRTPLHMAA------------------ 43
Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
                  A GH+ +V +LL   AD+  + D NG T LH+AA+ GHL++VEVLL  GA++N
Sbjct: 44  -------AVGHLEIVEVLLRNGADV-NAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVN 95
Query: 525 ATD----------------KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           A D                ++ + LL H A +N++ + G+TA  ++   G  DL   L
Sbjct: 96  AKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEIL 153

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD   + D  G+T LH+AA  GHL++VEVLL  GA++NA D     
Sbjct: 12  AGQDDEVRILMANGADA-NAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTN--- 67
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G T LHLAA  G+ ++   L+  + A ++       TPL+LAA  G
Sbjct: 68  --------------GTTPLHLAASLGHLEIVEVLLK-YGADVNAKDATGITPLYLAAYWG 112
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
            L++ ++LL  GA ++A D  G+    ++      ++A+I 
Sbjct: 113 HLEIVEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEIL 153

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 24/228 (10%)
Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
           K++PLH AAEAG + +C +L+  GA+ID   +  + P+  AA+NN  E  +  ++A  +L
Sbjct: 11  KRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKA-GAL 69
Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
           V     +G+TC H+AA +G   V++ L+   +  V    +     TP+  A E  H ++V
Sbjct: 70  VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD--GGWTPMIWATEYKHVDLV 127
Query: 241 RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSK----ALNVYSKKLGVTALHV 296
           ++L+  G+     +      +H AA +G   + E + ++K    A+N++    G + LH+
Sbjct: 128 KLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIH----GDSPLHI 183
Query: 297 AAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAA 344
           AA   + D V   LS                   L ++ G TPL  A+
Sbjct: 184 AARENRYDCVVLFLSRDSDVT-------------LKNKEGETPLQCAS 218

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 48/259 (18%)
Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 428
           +N  +PLH A   GHV +  +L+   A+ + +  ++ +T L  AA + HL+ V+ L+  G
Sbjct: 9   QNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAG 67
Query: 429 AEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAAD 488
           A ++  D  G+  +H AA+ GH  ++  LL  G+ +DV                      
Sbjct: 68  ALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ-MDVNCQ------------------- 107
Query: 489 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGR 548
                D  G T +  A  + H+ +V++LL +G++IN  D             N ++    
Sbjct: 108 -----DDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRD-------------NEEN---- 145
Query: 549 TALHLAAMNGYADLCRFLVHDHAAVIDI--LTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
             LH AA +G  D+   L+   AA  D+  + +   +PLH+AA   +     L L   + 
Sbjct: 146 ICLHWAAFSGCVDIAEILL---AAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD 202
Query: 607 IDATDDQGQKPIHVAAQNN 625
           +   + +G+ P+  A+ N+
Sbjct: 203 VTLKNKEGETPLQCASLNS 221

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 442 IHTAARYGHVGIINTLLQKGEKVDVTTNNLAC--------GHVTVVGLLLSRAADLLQSA 493
           +H AA  GHV I + L+Q G  +D  + +            H+  V  L+ +A  L+   
Sbjct: 15  LHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLI-KAGALVDPK 73
Query: 494 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
           D  G TCLH+AA  GH ++V+ LL  G                +  +N +   G T +  
Sbjct: 74  DAEGSTCLHLAAKKGHYEVVQYLLSNG----------------QMDVNCQDDGGWTPMIW 117
Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
           A    + DL + L+    + I+I    +   LH AA +G + + ++LL     + A +  
Sbjct: 118 ATEYKHVDLVKLLL-SKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIH 176
Query: 614 GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKE 649
           G  P+H+AA+ N  +   +FL +  S VT   KE E
Sbjct: 177 GDSPLHIAARENRYDCVVLFL-SRDSDVTLKNKEGE 211

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 548 RTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI 607
           R+ LH AA  G+ D+C  LV    A ID  +  ++TPL  AAE   L+  K L+  GA +
Sbjct: 12  RSPLHAAAEAGHVDICHMLVQ-AGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 608 DATDDQGQKPIHVAAQNNFPEVAQIFL 634
           D  D +G   +H+AA+    EV Q  L
Sbjct: 71  DPKDAEGSTCLHLAAKKGHYEVVQYLL 97

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 79.7 bits (195), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 50/159 (31%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N + S   TPL++AC  G    ++ ++ N  +++  D EG +AL  A ++  L + + LL
Sbjct: 29  NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL 88
Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
           +  + +N+K   G+T L  + + GY+++  FL+ +H A ++   L  +TPL +A++ G+ 
Sbjct: 89  SKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLL-EHGANVNDRNLEGETPLIVASKYGRS 147
Query: 135 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 173
           ++ K LL+LGA I A D  G      A      EV +IF
Sbjct: 148 EIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIF 186

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 488 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVG 547
           D L+  D  G T L  A  +  L + E LL +G+ +N                 +K   G
Sbjct: 59  DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN-----------------TKDFSG 101
Query: 548 RTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI 607
           +T L  + + GY+++  FL+ +H A ++   L  +TPL +A++ G+ ++ K LL+LGA I
Sbjct: 102 KTPLMWSIIFGYSEMSYFLL-EHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADI 160
Query: 608 DATDDQGQKPIHVAAQNNFPEVAQIF 633
            A D  G      A      EV +IF
Sbjct: 161 SARDLTGLTAEASARIFGRQEVIKIF 186

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G TPLH AA +G+   V+ LL S G  V+A++++ G  PLHLA   GH  +V LLL
Sbjct: 5   GSKDGNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKD-GNTPLHLAAKNGHAEIVKLLL 62
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
           ++ AD+  +  K+G T  H+A  +GH ++V++L  +GA++NA
Sbjct: 63  AKGADV-NARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNA 103

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 368 QENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ 427
            ++G  PLH A   GH   V  LLS+ AD+  +  K+G T LH+AA +GH ++V++LL +
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAK 64
Query: 428 GAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTT 468
           GA++NA  K G    H A + GH  I+  L  KG  V+  +
Sbjct: 65  GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 26/123 (21%)
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGE 462
           K+G T LH AA +GH + V+ LL +GA++NA  K G   +H AA+ GH  I+  LL KG 
Sbjct: 7   KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66
Query: 463 KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAE 522
            V+  +                          K+G T  H+A  +GH ++V++L  +GA+
Sbjct: 67  DVNARS--------------------------KDGNTPEHLAKKNGHHEIVKLLDAKGAD 100
Query: 523 INA 525
           +NA
Sbjct: 101 VNA 103

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 66.6 bits (161), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 18/115 (15%)
Query: 495 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLA 554
           K+G T LH AA +GH + V+ LL +GA++NA                 +S+ G T LHLA
Sbjct: 7   KDGNTPLHNAAKNGHAEEVKKLLSKGADVNA-----------------RSKDGNTPLHLA 49
Query: 555 AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA 609
           A NG+A++ + L+    A ++  +    TP HLA + G  ++ KLL   GA ++A
Sbjct: 50  AKNGHAEIVKLLLAK-GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNA 103

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 603
           S+ G T LH AA NG+A+  + L+    A ++  +    TPLHLAA+ G  ++ KLLL  
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK 64
Query: 604 GASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
           GA ++A    G  P H+A +N   E+ ++ 
Sbjct: 65  GADVNARSKDGNTPEHLAKKNGHHEIVKLL 94

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 641
            TPLH AA+ G  +  K LL  GA ++A    G  P+H+AA+N   E+ ++ L A  + V
Sbjct: 10  NTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL-AKGADV 68
Query: 642 TATTKEKERAKDLIAAGKHCE 662
            A +K+    + L     H E
Sbjct: 69  NARSKDGNTPEHLAKKNGHHE 89

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 44/220 (20%)
Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           D++ +T LH A + GH ++VE LL  G  +N  D  G   +H AA  G   I+  LL KG
Sbjct: 37  DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKG 96
Query: 462 EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
            +V+                          + ++NG T LH AA+    ++  +LL  GA
Sbjct: 97  AQVN--------------------------AVNQNGCTPLHYAASKNRHEIAVMLLEGGA 130
Query: 522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK 581
             +A D                     TA+H AA  G   +   L++ + A  +I     
Sbjct: 131 NPDAKD-----------------HYEATAMHRAAAKGNLKMIHILLY-YKASTNIQDTEG 172
Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 621
            TPLHLA +  +++  KLL+  GASI   + + + P+ VA
Sbjct: 173 NTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 212

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 527 DKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLH 586
           +++ +++L  K+      +  RTALH A   G+ ++  FL+     V D       +PLH
Sbjct: 20  EELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND-KDDAGWSPLH 78
Query: 587 LAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
           +AA AG+ ++ K LL  GA ++A +  G  P+H AA  N  E+A + L 
Sbjct: 79  IAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLE 127

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 44/220 (20%)
Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           D++ +T LH A + GH ++VE LL  G  +N  D  G   +H AA  G   I+  LL KG
Sbjct: 38  DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKG 97
Query: 462 EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
            +V+                          + ++NG T LH AA+    ++  +LL  GA
Sbjct: 98  AQVN--------------------------AVNQNGCTPLHYAASKNRHEIAVMLLEGGA 131
Query: 522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK 581
             +A D                     TA+H AA  G   +   L++ + A  +I     
Sbjct: 132 NPDAKD-----------------HYEATAMHRAAAKGNLKMIHILLY-YKASTNIQDTEG 173
Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 621
            TPLHLA +  +++  KLL+  GASI   + + + P+ VA
Sbjct: 174 NTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 213

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 527 DKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLH 586
           +++ +++L  K+      +  RTALH A   G+ ++  FL+     V D       +PLH
Sbjct: 21  EELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDA-GWSPLH 79
Query: 587 LAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 636
           +AA AG+ ++ K LL  GA ++A +  G  P+H AA  N  E+A + L  
Sbjct: 80  IAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 129

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 40/282 (14%)
Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
           AC  G    V  LL R AD+   A+ +G T LH A    ++ MV+ L+  GA IN  D  
Sbjct: 47  ACSSGDTEEVLRLLERGADI-NYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNE 105
Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G   +H AA  G++ I   L+ +G             HV  V              +  G
Sbjct: 106 GWIPLHAAASCGYLDIAEYLISQG------------AHVGAV--------------NSEG 139
Query: 498 KTCLHIAATHGHLQMVEVLLG-QGAEINATDKVCDALLTHKA--FINS-------KSRVG 547
            T L IA      ++++  +  QG +I A  K  + ++   A  ++NS        ++ G
Sbjct: 140 DTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSG 199
Query: 548 RTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI 607
            TALH+AA  GY ++ + L+     V +I      TPLH AA  G+ + C++L++    +
Sbjct: 200 GTALHVAAAKGYTEVLKLLIQARYDV-NIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258
Query: 608 DATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKE 649
           +A +  GQ    VA ++    + +  L+   +L+ +  +EK+
Sbjct: 259 EAVNKVGQTAFDVADEDILGYLEE--LQKKQNLLHSEKREKK 298

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 325 ASFLG-ELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGH 383
           AS LG  + S+ G +PLH+AA  G  +++ LLL   G    A+  +    PLHLAC  GH
Sbjct: 74  ASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKH-GANAGARNADQAV-PLHLACQQGH 131
Query: 384 VTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIH 443
             VV  LL   A      D +G T L  A + GH ++V +LL  GA INA++  G  ++H
Sbjct: 132 FQVVKCLLDSNAKP-NKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALH 190
Query: 444 TAARYGHVGIINTLLQKGEKVDV 466
            A    HV ++  LL  G  V V
Sbjct: 191 EAVIEKHVFVVELLLLHGASVQV 213

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 32/170 (18%)
Query: 360 GVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADL-LQSADKNGKTCLHIAATHGHL 418
           GV V   T ++G +PLH+A   G   ++ LLL   A+   ++AD+     LH+A   GH 
Sbjct: 78  GVNV---TSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQ--AVPLHLACQQGHF 132
Query: 419 QMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTV 478
           Q+V+ LL   A+ N  D  G   +  A   GH  ++  LLQ G  ++ + N         
Sbjct: 133 QVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNN--------- 183
Query: 479 VGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK 528
                             G T LH A    H+ +VE+LL  GA +   +K
Sbjct: 184 -----------------KGNTALHEAVIEKHVFVVELLLLHGASVQVLNK 216

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 19/159 (11%)
Query: 495 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLA 554
           ++G + LH+AA HG   ++ +LL  GA   A               N+   V    LHLA
Sbjct: 84  QDGSSPLHVAALHGRADLIPLLLKHGANAGAR--------------NADQAV---PLHLA 126
Query: 555 AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG 614
              G+  + + L+ D  A  +   L   TPL  A   G  ++  LLL  GASI+A++++G
Sbjct: 127 CQQGHFQVVKCLL-DSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKG 185
Query: 615 QKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKD 653
              +H A       V ++ L  H + V    K +  A D
Sbjct: 186 NTALHEAVIEKHVFVVELLL-LHGASVQVLNKRQRTAVD 223

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 72/162 (44%), Gaps = 44/162 (27%)
Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK  L  AA  G    V +L+  GA++NA D+ G   +H AA Y H+ I+  LL+ G  V
Sbjct: 15  GKKLLE-AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADV 73
Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
                                      + D +G T LH+AA  GHL++VEVLL  GA++N
Sbjct: 74  --------------------------NAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVN 107
Query: 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           A DK                  G+TA  ++  NG  DL   L
Sbjct: 108 AQDK-----------------FGKTAFDISIDNGNEDLAEIL 132

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 19/139 (13%)
Query: 497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM 556
           GK  L  AA  G    V +L+  GA++NA D                 R G T LHLAA 
Sbjct: 15  GKKLLE-AARAGQDDEVRILMANGADVNAND-----------------RKGNTPLHLAAD 56
Query: 557 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK 616
             + ++   L+  H A ++       TPLHLAA  G L++ ++LL  GA ++A D  G+ 
Sbjct: 57  YDHLEIVEVLLK-HGADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKT 115
Query: 617 PIHVAAQNNFPEVAQIFLR 635
              ++  N   ++A+I  +
Sbjct: 116 AFDISIDNGNEDLAEILQK 134

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 603
           S +G+  L  AA  G  D  R L+  + A ++    +  TPLHLAA+   L++ ++LL  
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMA-NGADVNANDRKGNTPLHLAADYDHLEIVEVLLKH 69
Query: 604 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL 654
           GA ++A D+ G  P+H+AA     E+ ++ L+ H + V A  K  + A D+
Sbjct: 70  GADVNAHDNDGSTPLHLAALFGHLEIVEVLLK-HGADVNAQDKFGKTAFDI 119

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 397 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINT 456
           L    D++ +T LH A + GH ++VE LL  G  +N  D  G   +H AA  G   I+  
Sbjct: 32  LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKA 91
Query: 457 LLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 516
           LL KG             HV  V              ++NG T LH AA+    ++  +L
Sbjct: 92  LLVKG------------AHVNAV--------------NQNGCTPLHYAASKNRHEIAVML 125
Query: 517 LGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDI 576
           L  GA  +A D   DA                TA+H AA  G   +   L+  + A  +I
Sbjct: 126 LEGGANPDAKDHY-DA----------------TAMHRAAAKGNLKMVHILLF-YKASTNI 167
Query: 577 LTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 621
                 TPLHLA +  +++  K L+  GASI   + + + P+ VA
Sbjct: 168 QDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA 212

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 489 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN----------------ATDKVCDA 532
           L    D++ +T LH A + GH ++VE LL  G  +N                  D++  A
Sbjct: 32  LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKA 91
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
           LL   A +N+ ++ G T LH AA     ++   L+ +  A  D       T +H AA  G
Sbjct: 92  LLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL-EGGANPDAKDHYDATAMHRAAAKG 150
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEK 648
            L++  +LL   AS +  D +G  P+H+A      E A+  +    S+     +EK
Sbjct: 151 NLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK 206

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 5/129 (3%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G   L  A  +G ++ VR+L+ + G  V+A   + G  PLHLA   GH+ +V +LL
Sbjct: 11  GSDLGKKLLE-ATRAGQDDEVRILM-ANGADVNAM-DDAGVTPLHLAAKRGHLEIVEVLL 67
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
              AD + ++D  G+T LH+AAT GHL++VEVLL  GA++NA DK G  +   +   G+ 
Sbjct: 68  KHGAD-VNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNE 126
Query: 452 GIINTLLQK 460
            +   +LQK
Sbjct: 127 DLAE-ILQK 134

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 44/162 (27%)
Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK  L  A   G    V +L+  GA++NA D  G   +H AA+ GH+ I+  LL+ G  V
Sbjct: 15  GKKLLE-ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADV 73
Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
           +                          ++D  G+T LH+AAT GHL++VEVLL  GA++N
Sbjct: 74  N--------------------------ASDSWGRTPLHLAATVGHLEIVEVLLEYGADVN 107
Query: 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           A DK                  G+TA  ++  NG  DL   L
Sbjct: 108 AQDK-----------------FGKTAFDISIDNGNEDLAEIL 132

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM 556
           GK  L  A   G    V +L+  GA++NA D                   G T LHLAA 
Sbjct: 15  GKKLLE-ATRAGQDDEVRILMANGADVNAMDDA-----------------GVTPLHLAAK 56
Query: 557 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK 616
            G+ ++   L+  H A ++      +TPLHLAA  G L++ ++LL+ GA ++A D  G+ 
Sbjct: 57  RGHLEIVEVLLK-HGADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKT 115
Query: 617 PIHVAAQNNFPEVAQIFLR 635
              ++  N   ++A+I  +
Sbjct: 116 AFDISIDNGNEDLAEILQK 134

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 25  LLIACNRGHMELVNTMLNNHARVDVFDQEGRSA--LHLAAEHGYLKVCDALLTHKAFINS 82
           LL A   G +E V  +    + V+  D EGR +  LH AA +  + V + LL H A +++
Sbjct: 16  LLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA 74
Query: 83  KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 142
           K + G   LH A   G+ ++   LV  H AV+++  L K TPLH AA  G+ ++CKLLL 
Sbjct: 75  KDKGGLVPLHNACSYGHYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 133
Query: 143 LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTK 186
            GA     +  G  P+ +    +     Q  LR   +L+ A  K
Sbjct: 134 HGADPTKKNRDGNTPLDLVKDGDTD--IQDLLRGDAALLDAAKK 175

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 499 TCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG 558
           T LH AA +  + +VE LL  GA+++A DK                  G   LH A   G
Sbjct: 48  TPLHFAAGYNRVSVVEYLLQHGADVHAKDKG-----------------GLVPLHNACSYG 90
Query: 559 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPI 618
           + ++   LV  H AV+++  L K TPLH AA  G+ ++CKLLL  GA     +  G  P+
Sbjct: 91  HYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 149
Query: 619 HVAAQNNFPEVAQIFLRAHPSLVTATTK 646
            +    +     Q  LR   +L+ A  K
Sbjct: 150 DLVKDGDTD--IQDLLRGDAALLDAAKK 175

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G   L  AA +G ++ VR+L+ + G  V+A+ +  G  PLHLA    H+ +V +LL
Sbjct: 11  GSDLGKKLLE-AARAGQDDEVRILM-ANGADVNAEDKV-GLTPLHLAAMNDHLEIVEVLL 67
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGH 450
              AD + + D  G+T LH+ A +GHL++VEVLL  GA++NA DK G  +   +   G+
Sbjct: 68  KNGAD-VNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGN 125

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 70.1 bits (170), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 72/162 (44%), Gaps = 44/162 (27%)
Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK  L  AA  G    V +L+  GA++NA DK G   +H AA   H+ I+  LL+ G  V
Sbjct: 15  GKKLLE-AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADV 73
Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
           +                          + D  G+T LH+ A +GHL++VEVLL  GA++N
Sbjct: 74  N--------------------------AIDAIGETPLHLVAMYGHLEIVEVLLKHGADVN 107
Query: 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           A DK                  G+TA  ++  NG  DL   L
Sbjct: 108 AQDK-----------------FGKTAFDISIDNGNEDLAEIL 132

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 19/139 (13%)
Query: 497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM 556
           GK  L  AA  G    V +L+  GA++NA DKV                 G T LHLAAM
Sbjct: 15  GKKLLE-AARAGQDDEVRILMANGADVNAEDKV-----------------GLTPLHLAAM 56
Query: 557 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK 616
           N + ++   L+ + A V  I  +  +TPLHL A  G L++ ++LL  GA ++A D  G+ 
Sbjct: 57  NDHLEIVEVLLKNGADVNAIDAI-GETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKT 115
Query: 617 PIHVAAQNNFPEVAQIFLR 635
              ++  N   ++A+I  +
Sbjct: 116 AFDISIDNGNEDLAEILQK 134

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 544 SRVGRTALHLAAMNGYADLCRFLVHDHAAV--IDILTLRKQTPLHLAAEAGQLQVCKLLL 601
           S +G+  L  AA  G  D  R L+ + A V   D + L   TPLHLAA    L++ ++LL
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNAEDKVGL---TPLHLAAMNDHLEIVEVLL 67
Query: 602 DLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL 654
             GA ++A D  G+ P+H+ A     E+ ++ L+ H + V A  K  + A D+
Sbjct: 68  KNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLK-HGADVNAQDKFGKTAFDI 119

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 397 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINT 456
           L    D++ +T LH A + GH ++VE LL  G  +N  D  G   +H AA  G   I+  
Sbjct: 32  LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKA 91
Query: 457 LLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 516
           LL KG             HV  V              ++NG T LH AA+    ++  +L
Sbjct: 92  LLVKG------------AHVNAV--------------NQNGCTPLHYAASKNRHEIAVML 125
Query: 517 LGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDI 576
           L  GA  +A D   DA                TA+H AA  G   +   L+  + A  +I
Sbjct: 126 LEGGANPDAKDHY-DA----------------TAMHRAAAKGNLKMVHILLF-YKASTNI 167
Query: 577 LTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 621
                 TPLHLA +  +++  K L+  GASI   + + + P+ VA
Sbjct: 168 QDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA 212

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 489 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN----------------ATDKVCDA 532
           L    D++ +T LH A + GH ++VE LL  G  +N                  D++  A
Sbjct: 32  LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKA 91
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
           LL   A +N+ ++ G T LH AA     ++   L+ +  A  D       T +H AA  G
Sbjct: 92  LLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL-EGGANPDAKDHYDATAMHRAAAKG 150
Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEK 648
            L++  +LL   AS +  D +G  P+H+A      E A+  +    S+     +EK
Sbjct: 151 NLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK 206

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 5/129 (3%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G   L  A  +G ++ VR+L+ + G  V+A   + G  PLHLA   GH+ +V +LL
Sbjct: 11  GSDLGKKLLE-ATRAGQDDEVRILM-ANGADVNAM-DDAGVTPLHLAAKRGHLEIVEVLL 67
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
              AD + ++D  G+T LH+AAT GHL++VEVLL  GA++NA DK G  +   +   G+ 
Sbjct: 68  KHGAD-VNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNE 126
Query: 452 GIINTLLQK 460
            +   +LQK
Sbjct: 127 DLAE-ILQK 134

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 73.2 bits (178), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 44/162 (27%)
Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK  L  A   G    V +L+  GA++NA D  G   +H AA+ GH+ I+  LL+ G  V
Sbjct: 15  GKKLLE-ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADV 73
Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
           +                          ++D  G+T LH+AAT GHL++VEVLL  GA++N
Sbjct: 74  N--------------------------ASDIWGRTPLHLAATVGHLEIVEVLLEYGADVN 107
Query: 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           A DK                  G+TA  ++  NG  DL   L
Sbjct: 108 AQDK-----------------FGKTAFDISIDNGNEDLAEIL 132

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 19/139 (13%)
Query: 497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM 556
           GK  L  A   G    V +L+  GA++NA D                   G T LHLAA 
Sbjct: 15  GKKLLE-ATRAGQDDEVRILMANGADVNAMDDA-----------------GVTPLHLAAK 56
Query: 557 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK 616
            G+ ++   L+  H A ++   +  +TPLHLAA  G L++ ++LL+ GA ++A D  G+ 
Sbjct: 57  RGHLEIVEVLLK-HGADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKT 115
Query: 617 PIHVAAQNNFPEVAQIFLR 635
              ++  N   ++A+I  +
Sbjct: 116 AFDISIDNGNEDLAEILQK 134

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 10/138 (7%)
Query: 338 TPLHLAAYSGNENVVRLLLNSAGVQVDAQTQE-NGYNPLHLACFGGHVTVVGLLLSRAA- 395
           TPLHLA  +    +   LL   G   D + ++  G  PLHLAC  G +  VG+L      
Sbjct: 47  TPLHLAVITNQPEIAEALL---GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTT 103
Query: 396 ----DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARS-IHTAARYGH 450
                +L++ + NG TCLH+A+ HG+L +VE+L+  GA++NA +    R+ +H A    +
Sbjct: 104 PHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN 163
Query: 451 VGIINTLLQKGEKVDVTT 468
             +++ LL+ G  V+  T
Sbjct: 164 PDLVSLLLKCGADVNRVT 181

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 37/182 (20%)
Query: 406 KTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVD 465
           +T LH+A      ++ E LLG G +    D  G   +H A   G +  +  L Q      
Sbjct: 46  QTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQS----- 100
Query: 466 VTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 525
            TT +L                 +L++ + NG TCLH+A+ HG+L +VE+L+  GA++NA
Sbjct: 101 CTTPHLH---------------SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA 145
Query: 526 TDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 585
            +  C+               GRTALHLA      DL   L+    A ++ +T +  +P 
Sbjct: 146 QEP-CN---------------GRTALHLAVDLQNPDLVSLLL-KCGADVNRVTYQGYSPY 188
Query: 586 HL 587
            L
Sbjct: 189 QL 190

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 494 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
           D  G T LH+A   G L  V VL           + C     H + + + +  G T LHL
Sbjct: 75  DFRGNTPLHLACEQGCLASVGVL----------TQSCTTPHLH-SILKATNYNGHTCLHL 123
Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
           A+++GY  +   LV   A V        +T LHLA +     +  LLL  GA ++    Q
Sbjct: 124 ASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQ 183
Query: 614 GQKPIHV 620
           G  P  +
Sbjct: 184 GYSPYQL 190

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 73.2 bits (178), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 10/138 (7%)
Query: 338 TPLHLAAYSGNENVVRLLLNSAGVQVDAQTQE-NGYNPLHLACFGGHVTVVGLLLSRAA- 395
           TPLHLA  +    +   LL   G   D + ++  G  PLHLAC  G +  VG+L      
Sbjct: 44  TPLHLAVITNQPEIAEALL---GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTT 100
Query: 396 ----DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARS-IHTAARYGH 450
                +L++ + NG TCLH+A+ HG+L +VE+L+  GA++NA +    R+ +H A    +
Sbjct: 101 PHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN 160
Query: 451 VGIINTLLQKGEKVDVTT 468
             +++ LL+ G  V+  T
Sbjct: 161 PDLVSLLLKCGADVNRVT 178

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 37/182 (20%)
Query: 406 KTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVD 465
           +T LH+A      ++ E LLG G +    D  G   +H A   G +  +  L Q      
Sbjct: 43  QTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQS----- 97
Query: 466 VTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 525
            TT +L                 +L++ + NG TCLH+A+ HG+L +VE+L+  GA++NA
Sbjct: 98  CTTPHLH---------------SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA 142
Query: 526 TDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 585
            +  C+               GRTALHLA      DL   L+    A ++ +T +  +P 
Sbjct: 143 QEP-CN---------------GRTALHLAVDLQNPDLVSLLL-KCGADVNRVTYQGYSPY 185
Query: 586 HL 587
            L
Sbjct: 186 QL 187

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 494 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
           D  G T LH+A   G L  V VL           + C     H + + + +  G T LHL
Sbjct: 72  DFRGNTPLHLACEQGCLASVGVL----------TQSCTTPHLH-SILKATNYNGHTCLHL 120
Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
           A+++GY  +   LV   A V        +T LHLA +     +  LLL  GA ++    Q
Sbjct: 121 ASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQ 180
Query: 614 GQKP 617
           G  P
Sbjct: 181 GYSP 184

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 72.8 bits (177), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 55/93 (59%)
Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N +   G TPL +A   GH+E+V  +L N A V+  D  G + LHLAA  G+L++ + L
Sbjct: 40  VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVL 99
Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 106
           L H A +N++ + G+TA  ++  NG  DL   L
Sbjct: 100 LKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 17/149 (11%)
Query: 276 MRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSES 335
           MR S   + +   LG   L  AA  GQ D VR L+++       D             E 
Sbjct: 1   MRGSHHHHHHGSDLGKKLLE-AARAGQDDEVRILMANGADVNAKD-------------EY 46
Query: 336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAA 395
           G+TPL+LA   G+  +V +LL + G  V+A     G+ PLHLA F GH+ +  +LL   A
Sbjct: 47  GLTPLYLATAHGHLEIVEVLLKN-GADVNA-VDAIGFTPLHLAAFIGHLEIAEVLLKHGA 104
Query: 396 DLLQSADKNGKTCLHIAATHGHLQMVEVL 424
           D + + DK GKT   I+  +G+  + E+L
Sbjct: 105 D-VNAQDKFGKTAFDISIGNGNEDLAEIL 132

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 17/110 (15%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD----- 527
            G    V +L++  AD+  + D+ G T L++A  HGHL++VEVLL  GA++NA D     
Sbjct: 24  AGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFT 82
Query: 528 -----------KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
                      ++ + LL H A +N++ + G+TA  ++  NG  DL   L
Sbjct: 83  PLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 23/141 (16%)
Query: 497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM 556
           GK  L  AA  G    V +L+  GA++NA D+                  G T L+LA  
Sbjct: 15  GKKLLE-AARAGQDDEVRILMANGADVNAKDEY-----------------GLTPLYLATA 56
Query: 557 NGYADLCRFLVHDHAAV--IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG 614
           +G+ ++   L+ + A V  +D +     TPLHLAA  G L++ ++LL  GA ++A D  G
Sbjct: 57  HGHLEIVEVLLKNGADVNAVDAIGF---TPLHLAAFIGHLEIAEVLLKHGADVNAQDKFG 113
Query: 615 QKPIHVAAQNNFPEVAQIFLR 635
           +    ++  N   ++A+I  +
Sbjct: 114 KTAFDISIGNGNEDLAEILQK 134

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 603
           S +G+  L  AA  G  D  R L+ + A V +       TPL+LA   G L++ ++LL  
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKN 69
Query: 604 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEG 663
           GA ++A D  G  P+H+AA     E+A++ L+ H + V A  K  + A D I+ G   E 
Sbjct: 70  GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLK-HGADVNAQDKFGKTAFD-ISIGNGNED 127
Query: 664 MA 665
           +A
Sbjct: 128 LA 129

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS+ G   L  A  +G ++ VR+L+ + G  V+A   + G  PLHLA   GH+ +V +LL
Sbjct: 11  GSDLGKKLLE-ATRAGQDDEVRILM-ANGADVNAM-DDAGVTPLHLAAKRGHLEIVEVLL 67
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
              AD + + D  G+T LH+AAT GHL++VEVLL  GA++NA DK G  +   +   G+ 
Sbjct: 68  KHGAD-VNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNE 126
Query: 452 GIINTLLQK 460
            +   +LQK
Sbjct: 127 DLAE-ILQK 134

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 73/162 (45%), Gaps = 44/162 (27%)
Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK  L  A   G    V +L+  GA++NA D  G   +H AA+ GH+ I+  LL+ G  V
Sbjct: 15  GKKLLE-ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADV 73
Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
           +                          + D  G+T LH+AAT GHL++VEVLL  GA++N
Sbjct: 74  N--------------------------ARDIWGRTPLHLAATVGHLEIVEVLLEYGADVN 107
Query: 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           A DK                  G+TA  ++  NG  DL   L
Sbjct: 108 AQDK-----------------FGKTAFDISIDNGNEDLAEIL 132

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 19/139 (13%)
Query: 497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM 556
           GK  L  A   G    V +L+  GA++NA D                   G T LHLAA 
Sbjct: 15  GKKLLE-ATRAGQDDEVRILMANGADVNAMDDA-----------------GVTPLHLAAK 56
Query: 557 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK 616
            G+ ++   L+  H A ++   +  +TPLHLAA  G L++ ++LL+ GA ++A D  G+ 
Sbjct: 57  RGHLEIVEVLLK-HGADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKT 115
Query: 617 PIHVAAQNNFPEVAQIFLR 635
              ++  N   ++A+I  +
Sbjct: 116 AFDISIDNGNEDLAEILQK 134

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 73/162 (45%), Gaps = 44/162 (27%)
Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK  L  AA  G    V +L+  GA++NA D+ G   +H AA+ GH+ I+  LL+ G  V
Sbjct: 15  GKKLLE-AARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADV 73
Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
           +                          + D  G T LH+AA  GHL++VEVLL  GA++N
Sbjct: 74  N--------------------------AEDNFGITPLHLAAIRGHLEIVEVLLKHGADVN 107
Query: 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           A DK                  G+TA  ++  NG  DL   L
Sbjct: 108 AQDK-----------------FGKTAFDISIDNGNEDLAEIL 132

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 603
           S +G+  L  AA  G  D  R L+  + A ++ L     TPLHLAA+ G L++ ++LL  
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMA-NGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKY 69
Query: 604 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL 654
           GA ++A D+ G  P+H+AA     E+ ++ L+ H + V A  K  + A D+
Sbjct: 70  GADVNAEDNFGITPLHLAAIRGHLEIVEVLLK-HGADVNAQDKFGKTAFDI 119

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Query: 25  LLIACNRGHMELVNTMLNNHARVDVFDQEGRSA--LHLAAEHGYLKVCDALLTHKAFINS 82
           LL A   G +E V  +    + V+  D EGR +  LH AA +  + V + LL H A +++
Sbjct: 14  LLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA 72
Query: 83  KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 142
           K + G   LH A   G+ ++   LV  H AV+++  L K TPLH AA  G+ ++CKLLL 
Sbjct: 73  KDKGGLVPLHNACSYGHYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 131
Query: 143 LGASIDATDDQGQKPI 158
            GA     +  G  P+
Sbjct: 132 HGADPTKKNRDGNTPL 147

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
Query: 499 TCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG 558
           T LH AA +  + +VE LL  GA+++A DK                  G   LH A   G
Sbjct: 46  TPLHFAAGYNRVSVVEYLLQHGADVHAKDKG-----------------GLVPLHNACSYG 88
Query: 559 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPI 618
           + ++   LV  H AV+++  L K TPLH AA  G+ ++CKLLL  GA     +  G  P+
Sbjct: 89  HYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 147

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Query: 25  LLIACNRGHMELVNTMLNNHARVDVFDQEGRSA--LHLAAEHGYLKVCDALLTHKAFINS 82
           LL A   G +E V  +    + V+  D EGR +  LH AA +  + V + LL H A +++
Sbjct: 12  LLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA 70
Query: 83  KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 142
           K + G   LH A   G+ ++   LV  H AV+++  L K TPLH AA  G+ ++CKLLL 
Sbjct: 71  KDKGGLVPLHNACSYGHYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 129
Query: 143 LGASIDATDDQGQKPI 158
            GA     +  G  P+
Sbjct: 130 HGADPTKKNRDGNTPL 145

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
Query: 499 TCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG 558
           T LH AA +  + +VE LL  GA+++A DK                  G   LH A   G
Sbjct: 44  TPLHFAAGYNRVSVVEYLLQHGADVHAKDKG-----------------GLVPLHNACSYG 86
Query: 559 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPI 618
           + ++   LV  H AV+++  L K TPLH AA  G+ ++CKLLL  GA     +  G  P+
Sbjct: 87  HYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 145

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 2/135 (1%)
Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS   M  +      GN   VRL L++    ++ Q  ++G++PLH AC  G   VV +L+
Sbjct: 1   GSPEFMDDIFTQCREGNAVAVRLWLDNTENDLN-QGDDHGFSPLHWACREGRSAVVEMLI 59
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
            R A  +   ++   T LH+AA+HGH  +V+ LL   A+INA ++ G   +H A  +G  
Sbjct: 60  MRGA-RINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQD 118
Query: 452 GIINTLLQKGEKVDV 466
            +   L+  G  V +
Sbjct: 119 QVAEDLVANGALVSI 133

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 26/150 (17%)
Query: 379 CFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGG 438
           C  G+   V L L    + L   D +G + LH A   G   +VE+L+ +GA IN  ++G 
Sbjct: 13  CREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGD 72
Query: 439 ARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGK 498
              +H AA +GH  I+  LLQ   K D+   N                        ++G 
Sbjct: 73  DTPLHLAASHGHRDIVQKLLQY--KADINAVN------------------------EHGN 106
Query: 499 TCLHIAATHGHLQMVEVLLGQGAEINATDK 528
             LH A   G  Q+ E L+  GA ++  +K
Sbjct: 107 VPLHYACFWGQDQVAEDLVANGALVSICNK 136

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 474 GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDAL 533
           G+   V L L    + L   D +G + LH A   G   +VE+L+ +GA IN  ++  D  
Sbjct: 16  GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDD-- 73
Query: 534 LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 593
                          T LHLAA +G+ D+ + L+  + A I+ +      PLH A   GQ
Sbjct: 74  ---------------TPLHLAASHGHRDIVQKLLQ-YKADINAVNEHGNVPLHYACFWGQ 117
Query: 594 LQVCKLLLDLGASIDATDDQGQKPIHVA 621
            QV + L+  GA +   +  G+ P+  A
Sbjct: 118 DQVAEDLVANGALVSICNKYGEMPVDKA 145

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 540 INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 599
           +N     G + LH A   G + +   L+    A I+++     TPLHLAA  G   + + 
Sbjct: 32  LNQGDDHGFSPLHWACREGRSAVVEMLIM-RGARINVMNRGDDTPLHLAASHGHRDIVQK 90
Query: 600 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAA 657
           LL   A I+A ++ G  P+H A      +VA+  + A+ +LV+   K  E   D   A
Sbjct: 91  LLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLV-ANGALVSICNKYGEMPVDKAKA 147

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 70/162 (43%), Gaps = 44/162 (27%)
Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK  L  AA  G    V +L   GA++NA D  G   +H AA  GH+ I+  LL+ G  V
Sbjct: 15  GKKLLE-AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADV 73
Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
           + T N                           G+T LH+AA   HL++VEVLL  GA++N
Sbjct: 74  NATGNT--------------------------GRTPLHLAAWADHLEIVEVLLKHGADVN 107
Query: 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           A DK                  G+TA  ++  NG  DL   L
Sbjct: 108 AQDK-----------------FGKTAFDISIDNGNEDLAEIL 132

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM 556
           GK  L  AA  G    V +L   GA++NA D                   G T LHLAAM
Sbjct: 15  GKKLLE-AARAGQDDEVRILTANGADVNAND-----------------YWGHTPLHLAAM 56
Query: 557 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK 616
            G+ ++   L+ +  A ++      +TPLHLAA A  L++ ++LL  GA ++A D  G+ 
Sbjct: 57  LGHLEIVEVLLKN-GADVNATGNTGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKT 115
Query: 617 PIHVAAQNNFPEVAQIFLR 635
              ++  N   ++A+I  +
Sbjct: 116 AFDISIDNGNEDLAEILQK 134

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 603
           S +G+  L  AA  G  D  R L  +  A ++       TPLHLAA  G L++ ++LL  
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILTAN-GADVNANDYWGHTPLHLAAMLGHLEIVEVLLKN 69
Query: 604 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL 654
           GA ++AT + G+ P+H+AA  +  E+ ++ L+ H + V A  K  + A D+
Sbjct: 70  GADVNATGNTGRTPLHLAAWADHLEIVEVLLK-HGADVNAQDKFGKTAFDI 119

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 337 MTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAAD 396
           M  +      GN   VRL L++    ++ Q  ++G++PLH AC  G   VV +L+ R A 
Sbjct: 1   MDDIFTQCREGNAVAVRLWLDNTENDLN-QGDDHGFSPLHWACREGRSAVVEMLIMRGA- 58
Query: 397 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINT 456
            +   ++   T LH+AA+HGH  +V+ LL   A+INA ++ G   +H A  +G   +   
Sbjct: 59  RINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAED 118
Query: 457 LLQKGEKVDVTT 468
           L+  G  V +  
Sbjct: 119 LVANGALVSICN 130

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 26/150 (17%)
Query: 379 CFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGG 438
           C  G+   V L L    + L   D +G + LH A   G   +VE+L+ +GA IN  ++G 
Sbjct: 8   CREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGD 67
Query: 439 ARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGK 498
              +H AA +GH  I+  LLQ   K D+   N                        ++G 
Sbjct: 68  DTPLHLAASHGHRDIVQKLLQY--KADINAVN------------------------EHGN 101
Query: 499 TCLHIAATHGHLQMVEVLLGQGAEINATDK 528
             LH A   G  Q+ E L+  GA ++  +K
Sbjct: 102 VPLHYACFWGQDQVAEDLVANGALVSICNK 131

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 474 GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDAL 533
           G+   V L L    + L   D +G + LH A   G   +VE+L+ +GA IN  ++  D  
Sbjct: 11  GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDD-- 68
Query: 534 LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 593
                          T LHLAA +G+ D+ + L+  + A I+ +      PLH A   GQ
Sbjct: 69  ---------------TPLHLAASHGHRDIVQKLLQ-YKADINAVNEHGNVPLHYACFWGQ 112
Query: 594 LQVCKLLLDLGASIDATDDQGQKPIHVA 621
            QV + L+  GA +   +  G+ P+  A
Sbjct: 113 DQVAEDLVANGALVSICNKYGEMPVDKA 140

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 540 INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 599
           +N     G + LH A   G + +   L+    A I+++     TPLHLAA  G   + + 
Sbjct: 27  LNQGDDHGFSPLHWACREGRSAVVEMLIM-RGARINVMNRGDDTPLHLAASHGHRDIVQK 85
Query: 600 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKD 653
           LL   A I+A ++ G  P+H A      +VA+  + A+ +LV+   K  E   D
Sbjct: 86  LLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLV-ANGALVSICNKYGEMPVD 138

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 7/227 (3%)
Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
           A ++G  + C  L+     +    +   T LH AA+N   DL ++ +   A V  +    
Sbjct: 16  ATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDL 75
Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
             TPLH A   G L +   L+  GA     D +G   IH+AAQ     +   +L A    
Sbjct: 76  NSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVA-YLIAKGQD 134
Query: 181 VTATTKDGNTCAHIAAMQG-SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANV 239
           V    ++G T    AA +  SV     L+ F+ S  ++  ++  + T L  A   G+  V
Sbjct: 135 VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS--VNLGDKYHKNTALHWAVLAGNTTV 192
Query: 240 VRVLVKAGASCTDENKTGFTAVHLAAQNGHNQV---LEEMRSSKALN 283
           + +L++AGA+   +N  G +A+ LA Q  +  +   L+E R +K  +
Sbjct: 193 ISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYD 239

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 10/181 (5%)
Query: 356 LNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH 415
           L  AG  V    +EN    LH A     + +V   +S+ A + Q       T LH A   
Sbjct: 28  LVEAGYDVRQPDKEN-VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQ 86
Query: 416 GHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNN----- 470
           GHL MV  L+  GA+ +  D  G   IH AA++GH  I+  L+ KG+ VD+   N     
Sbjct: 87  GHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPL 146
Query: 471 ----LACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT 526
                    V    LLL+    +      +  T LH A   G+  ++ +LL  GA ++A 
Sbjct: 147 MWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQ 206
Query: 527 D 527
           +
Sbjct: 207 N 207

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 28/222 (12%)
Query: 412 AATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNL 471
           A  +G  +    L+  G ++   DK     +H AA    + ++   + KG  VD    +L
Sbjct: 16  ATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDL 75
Query: 472 AC---------GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAE 522
                      GH+++V  L+   AD     D  G +C+H+AA  GH  +V  L+ +G +
Sbjct: 76  NSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD 134
Query: 523 INATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA-DLCRFLVHDHAAVIDILTLRK 581
           ++  D+                  G T L  AA   ++ D  R L+  + +V       K
Sbjct: 135 VDMMDQN-----------------GMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHK 177
Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQ 623
            T LH A  AG   V  LLL+ GA++DA + +G+  + +A Q
Sbjct: 178 NTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQ 219

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 343 AAYSGNENVVRLLL-NSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSA 401
           AA +G ++ VR+L+ N A    D      G +PLHLA   GH +   +LL RA     + 
Sbjct: 9   AARAGQDDEVRILMANGAPFTTDWL----GTSPLHLAAQYGHFSTTEVLL-RAGVSRDAR 63
Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
            K  +T LH+AA+ GH  +VEVLL  GA++NA D     ++H A  + H  ++  L++ G
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 462 EKVDVTTNNLAC 473
              DV T +  C
Sbjct: 124 --ADVHTQSKFC 133

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 44/178 (24%)
Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK  L  AA  G    V +L+  GA    TD  G   +H AA+YGH      LL+ G   
Sbjct: 3   GKKLLE-AARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60
Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
           D  T                          K  +T LH+AA+ GH  +VEVLL  GA++N
Sbjct: 61  DART--------------------------KVDRTPLHMAASEGHANIVEVLLKHGADVN 94
Query: 525 ATD----------------KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           A D                +V + L+ + A ++++S+  +TA  ++  NG  DL   L
Sbjct: 95  AKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 18/137 (13%)
Query: 497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM 556
           G + LH+AA +GH    EVLL  G   +A                 +++V RT LH+AA 
Sbjct: 34  GTSPLHLAAQYGHFSTTEVLLRAGVSRDA-----------------RTKVDRTPLHMAAS 76
Query: 557 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK 616
            G+A++   L+  H A ++   + K T LH A E    +V +LL+  GA +       + 
Sbjct: 77  EGHANIVEVLL-KHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT 135
Query: 617 PIHVAAQNNFPEVAQIF 633
              ++  N   ++A+I 
Sbjct: 136 AFDISIDNGNEDLAEIL 152

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 335 SGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRA 394
           S  +P+H AA  G++  +R L+ S G  V+  T ++  +PLH AC GGH++ V +LL   
Sbjct: 2   SDWSPMHEAAIHGHQLSLRNLI-SQGWAVNIITADH-VSPLHEACLGGHLSCVKILLKHG 59
Query: 395 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGII 454
           A  +     +  T L  A   G    V +LL  GA +   +   A  IH AAR GHV  +
Sbjct: 60  AQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ-PESDLASPIHEAARRGHVECV 117
Query: 455 NTLLQKGEKVDVTTNN------LAC--GHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT 506
           N+L+  G  +D   ++      LAC       V  LL   AD+ Q   K   + LH  A 
Sbjct: 118 NSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQG--KGQDSPLHAVAR 175
Query: 507 HGHLQMVEVLLGQGAEINATD 527
               ++  +L+  GA+  A +
Sbjct: 176 TASEELACLLMDFGADTQAKN 196

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 35/244 (14%)
Query: 409 LHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTT 468
           +H AA HGH   +  L+ QG  +N         +H A   GH+  +  LL+ G +V+  T
Sbjct: 7   MHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT 66
Query: 469 --------NNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 520
                   N    G    V LLL   A +   +D    + +H AA  GH++ V  L+  G
Sbjct: 67  ADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDL--ASPIHEAARRGHVECVNSLIAYG 124
Query: 521 AEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 580
             I+           HK      S +G T L+LA  N      + L+   A   D+   +
Sbjct: 125 GNID-----------HKI-----SHLG-TPLYLACENQQRACVKKLLESGA---DVNQGK 164
Query: 581 KQ-TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH-- 637
            Q +PLH  A     ++  LL+D GA   A + +G++P+ +    +   +AQ+FL     
Sbjct: 165 GQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGP 222
Query: 638 PSLV 641
           PSL+
Sbjct: 223 PSLM 226

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 28/216 (12%)
Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN- 432
           PLH AC       V  LL     LL   D++G+  LH + +    ++   LL +   +N 
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 433 --ATDKGGARSIHTAARYGHVGIINTLLQKGEKVD---VTTNNLACGHVTV------VGL 481
               D  G    H A   G++ ++ +L  +  K D   +T   + C H+ V      V  
Sbjct: 65  DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 482 LLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFIN 541
            L      ++  DK  +  LH AA+ G L+++E+L G G                K+ +N
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG----------------KSAVN 168
Query: 542 SKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 577
            + + G T L  A   G+ D    LV  + A  D++
Sbjct: 169 WQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLV 204

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 478 VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHK 537
           V  LL S+ + LLQ  D++G+  LH + +    ++   LL +   +N  D   D+     
Sbjct: 18  VQELLHSKPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDS----- 71
Query: 538 AFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ--TPLHLAAEAGQLQ 595
                    G T  H+A   G  ++ + L +D     D+  +  Q  T LHLA      +
Sbjct: 72  ---------GWTPFHIACSVGNLEVVKSL-YDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121
Query: 596 VCKLLLDLGASIDATDDQGQKPIHVAA 622
           V + L++ GAS+   D   Q P+H AA
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPLHRAA 148

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 28/216 (12%)
Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN- 432
           PLH AC       V  LL     LL   D++G+  LH + +    ++   LL +   +N 
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 433 --ATDKGGARSIHTAARYGHVGIINTLLQKGEKVD---VTTNNLACGHVTV------VGL 481
               D  G    H A   G++ ++ +L  +  K D   +T   + C H+ V      V  
Sbjct: 65  DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 482 LLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFIN 541
            L      ++  DK  +  LH AA+ G L+++E+L G G                K+ +N
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG----------------KSAVN 168
Query: 542 SKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 577
            + + G T L  A   G+ D    LV  + A  D++
Sbjct: 169 WQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLV 204

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 478 VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHK 537
           V  LL S+ + LLQ  D++G+  LH + +    ++   LL +   +N  D   D+     
Sbjct: 18  VQELLHSKPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDS----- 71
Query: 538 AFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ--TPLHLAAEAGQLQ 595
                    G T  H+A   G  ++ + L +D     D+  +  Q  T LHLA      +
Sbjct: 72  ---------GWTPFHIACSVGNLEVVKSL-YDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121
Query: 596 VCKLLLDLGASIDATDDQGQKPIHVAA 622
           V + L++ GAS+   D   Q P+H AA
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPLHRAA 148

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 28/216 (12%)
Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN- 432
           PLH AC       V  LL     LL   D++G+  LH + +    ++   LL +   +N 
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 433 --ATDKGGARSIHTAARYGHVGIINTLLQKGEKVD---VTTNNLACGHVTV------VGL 481
               D  G    H A   G++ ++ +L  +  K D   +T   + C H+ V      V  
Sbjct: 65  DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124
Query: 482 LLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFIN 541
            L      ++  DK  +  LH AA+ G L+++E+L G G                K+ +N
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG----------------KSAVN 168
Query: 542 SKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 577
            + + G T L  A   G+ D    LV  + A  D++
Sbjct: 169 WQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLV 204

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 478 VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHK 537
           V  LL S+ + LLQ  D++G+  LH + +    ++   LL +   +N  D   D+     
Sbjct: 18  VQELLHSKPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDS----- 71
Query: 538 AFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ--TPLHLAAEAGQLQ 595
                    G T  H+A   G  ++ + L +D     D+  +  Q  T LHLA      +
Sbjct: 72  ---------GWTPFHIACSVGNLEVVKSL-YDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121
Query: 596 VCKLLLDLGASIDATDDQGQKPIHVAA 622
           V + L++ GAS+   D   Q P+H AA
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPLHRAA 148

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 33/236 (13%)
Query: 409 LHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTT 468
           +H AA HGH   +  L+ QG  +N         +H A   GH+  +  LL+ G +V+  T
Sbjct: 63  MHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT 122
Query: 469 --------NNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 520
                   N    G    V LLL   A +   +D    + +H AA  GH++ V  L+  G
Sbjct: 123 ADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDL--ASPIHEAARRGHVECVNSLIAYG 180
Query: 521 AEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 580
             I+           HK      S +G T L+LA  N      + L+   A   D+   +
Sbjct: 181 GNID-----------HKI-----SHLG-TPLYLACENQQRACVKKLLESGA---DVNQGK 220
Query: 581 KQ-TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 635
            Q +PLH        ++  LL+D GA   A + +G++P+ +    +   +AQ+FL 
Sbjct: 221 GQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLE 274

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 129/314 (41%), Gaps = 35/314 (11%)
Query: 347 GNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGK 406
           GN N      N   +Q+  + +      LH    G +  +   +   + +++    ++ +
Sbjct: 70  GNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSYA-ITEPITRESVNIIDP--RHNR 126
Query: 407 TCLHIAATHGHLQMVEVLL--------GQGAEINATDKGG---------ARSIHTAARYG 449
           T LH  A++   +  E L+          GA++NA D            AR     A   
Sbjct: 127 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAXDCDENTPLXLAVLARRRRLVAYLX 186
Query: 450 HVGIINTLLQKGEK--VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAA-T 506
             G   T+  K E+  +     N   G   V  L  ++    ++  D+NG T L I A  
Sbjct: 187 KAGADPTIYNKSERSALHQAAANRDFG-XXVYXLNSTKLKGDIEELDRNGXTALXIVAHN 245
Query: 507 HGHLQMV--EVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCR 564
            G  Q+   ++L+ +GA+++             A  +S+   GRTALH AA      + +
Sbjct: 246 EGRDQVASAKLLVEKGAKVD---------YDGAARKDSEKYKGRTALHYAAQVSNXPIVK 296
Query: 565 FLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQN 624
           +LV +  +  D      +TP+ LAA+ G+++V   L+  GAS++A D        +A  N
Sbjct: 297 YLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQGASVEAVDATDHTARQLAQAN 356
Query: 625 NFPEVAQIFLRAHP 638
           N   +  IF R  P
Sbjct: 357 NHHNIVDIFDRCRP 370

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 29/256 (11%)
Query: 180 LVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSG--VISARNRVTEATPLQLAAEGGHA 237
           + T   +DG+T  HIA +QG++  +  L+   + G   +   N + + TPL LA      
Sbjct: 1   MATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ-TPLHLAVITTLP 59
Query: 238 NVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA---LNVYSKKL-GVTA 293
           +VVR+LV AGAS    ++ G TA HLA ++     L  +  S A   L++ ++   G+TA
Sbjct: 60  SVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTA 119
Query: 294 LHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVR 353
           LHVA      +TV+ LL             GA  +  +  +SG +PL  A  + + ++V+
Sbjct: 120 LHVAVNTECQETVQLLLER-----------GAD-IDAVDIKSGRSPLIHAVENNSLSMVQ 167
Query: 354 LLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKN--GKTCLHI 411
           LLL   G  V+AQ   +G + LH A   G + +V  L+   AD   S+ KN    T L +
Sbjct: 168 LLLQH-GANVNAQMY-SGSSALHSASGRGLLPLVRTLVRSGAD---SSLKNCHNDTPLMV 222
Query: 412 AATHGHLQMVEVLLGQ 427
           A +    +++++L G+
Sbjct: 223 ARSR---RVIDILRGK 235

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 103/245 (42%), Gaps = 51/245 (20%)
Query: 334 ESGMTPLHLAAYSGNENVVRLLLN---SAGVQVDAQTQENGYNPLHLACFGGHVTVVGLL 390
           E G TPLH+A   GN   V  L+N     G ++D         PLHLA      +VV LL
Sbjct: 7   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLR-QTPLHLAVITTLPSVVRLL 65
Query: 391 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA----EINATDKGGARSIHTAA 446
           ++  A  + + D++G+T  H+A  H     +  LL   A    ++ A +  G  ++H A 
Sbjct: 66  VTAGASPM-ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVA- 123
Query: 447 RYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT 506
                  +NT  Q+                  V LLL R AD+     K+G++ L  A  
Sbjct: 124 -------VNTECQE-----------------TVQLLLERGADIDAVDIKSGRSPLIHAVE 159
Query: 507 HGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           +  L MV++LL                  H A +N++   G +ALH A+  G   L R L
Sbjct: 160 NNSLSMVQLLL-----------------QHGANVNAQMYSGSSALHSASGRGLLPLVRTL 202
Query: 567 VHDHA 571
           V   A
Sbjct: 203 VRSGA 207

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 104/238 (43%), Gaps = 43/238 (18%)
Query: 386 VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTA 445
           V+  LL++ A+L  + DK G+T LH+AA        + LL  GA+ N+ D  G   +H A
Sbjct: 32  VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 91
Query: 446 ARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAA 505
                +G+   LL+                        +RA +L  +   +G T L +AA
Sbjct: 92  VAADAMGVFQILLR------------------------NRATNL-NARMHDGTTPLILAA 126
Query: 506 THGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRF 565
                 MVE L+   A+INA D             NS    G+TALH AA     +    
Sbjct: 127 RLAIEGMVEDLITADADINAAD-------------NS----GKTALHWAAAVNNTEAVNI 169
Query: 566 LVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQ 623
           L+  HA   D    + +TPL LAA  G  +  K LLD  A+ + TD   + P  VA++
Sbjct: 170 LLMHHANR-DAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASE 226

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 21/191 (10%)
Query: 458 LQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 517
           L  GE ++   ++ A     V+  LL++ A+L  + DK G+T LH+AA        + LL
Sbjct: 16  LDTGEDIENNEDSTA----QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLL 71
Query: 518 GQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 577
             GA+ N                 S+   GRT LH A       + + L+ + A  ++  
Sbjct: 72  DAGADAN-----------------SQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNAR 114
Query: 578 TLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 637
                TPL LAA      + + L+   A I+A D+ G+  +H AA  N  E   I L  H
Sbjct: 115 MHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHH 174
Query: 638 PSLVTATTKEK 648
            +      K++
Sbjct: 175 ANRDAQDDKDE 185

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 56/277 (20%)
Query: 370 NGYNPLHLA-CFGGHV------------TVVGLLLSRAADLLQSADKNGKTCLHIAATHG 416
           +G+ PL +A C GG +             V+   + + A L    D+ G+T LH+AA + 
Sbjct: 9   DGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYS 68
Query: 417 HLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHV 476
                + LL   A+ N  D  G   +H A      G+   L++                 
Sbjct: 69  RSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIR----------------- 111
Query: 477 TVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTH 536
                  +RA DL  +   +G T L +AA      M+E L+   A++NA D +       
Sbjct: 112 -------NRATDL-DARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL------- 156
Query: 537 KAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQV 596
                     G++ALH AA     D    L+  + A  D+   R++TPL LAA  G  + 
Sbjct: 157 ----------GKSALHWAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYET 205
Query: 597 CKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
            K+LLD  A+ D TD   + P  +A +    ++ ++ 
Sbjct: 206 AKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 56/277 (20%)
Query: 370 NGYNPLHLA-CFGGHV------------TVVGLLLSRAADLLQSADKNGKTCLHIAATHG 416
           +G+ PL +A C GG +             V+   + + A L    D+ G+T LH+AA + 
Sbjct: 10  DGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYS 69
Query: 417 HLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHV 476
                + LL   A+ N  D  G   +H A      G+   L++                 
Sbjct: 70  RSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIR----------------- 112
Query: 477 TVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTH 536
                  +RA DL  +   +G T L +AA      M+E L+   A++NA D +       
Sbjct: 113 -------NRATDL-DARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL------- 157
Query: 537 KAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQV 596
                     G++ALH AA     D    L+ +  A  D+   R++TPL LAA  G  + 
Sbjct: 158 ----------GKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLFLAAREGSYET 206
Query: 597 CKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
            K+LLD  A+ D TD   + P  +A +    ++ ++ 
Sbjct: 207 AKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 243

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 113/277 (40%), Gaps = 56/277 (20%)
Query: 370 NGYNPLHLA-CFGGHV------------TVVGLLLSRAADLLQSADKNGKTCLHIAATHG 416
           +G+ PL +A C GG +             V+   + + A L    D+ G T LH+AA + 
Sbjct: 9   DGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGATALHLAAAYS 68
Query: 417 HLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHV 476
                + LL   A+ N  D  G   +H A      G+   L++                 
Sbjct: 69  RSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIR----------------- 111
Query: 477 TVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTH 536
                  +RA DL  +   +G T L +AA      M+E L+   A++NA D +       
Sbjct: 112 -------NRATDL-DARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL------- 156
Query: 537 KAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQV 596
                     G++ALH AA     D    L+  + A  D+   R++TPL LAA  G  + 
Sbjct: 157 ----------GKSALHWAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYET 205
Query: 597 CKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
            K+LLD  A+ D TD   + P  +A +    ++ ++ 
Sbjct: 206 AKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           G T L IA  +G +  V  +L N +  +V D  G + LH A  HG+LKV + LL HKA +
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69
Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAA--VIDILTLR 120
           N+      + LH AA NG+ D+ + L+   A+   ++I  LR
Sbjct: 70  NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLR 111

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 363 VDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE 422
           +D  T   G   LH+A   G +  V  LL   +D     D  G T LH A  HGHL++VE
Sbjct: 2   IDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVE 60
Query: 423 VLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           +LL   A +N T       +H AA+ GHV I+  LL  G
Sbjct: 61  LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYG 99

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 18/122 (14%)
Query: 497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM 556
           G+T LHIA+  G +  VE LL  G++ N  D                   G T LH A  
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKD-----------------HAGWTPLHEACN 52
Query: 557 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK 616
           +G+  +   L+  H A+++    +  +PLH AA+ G + + KLLL  GAS +A +  G +
Sbjct: 53  HGHLKVVELLLQ-HKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLR 111
Query: 617 PI 618
           P+
Sbjct: 112 PV 113

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 547 GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
           G T LH+A++ G      +L+ +  +  ++      TPLH A   G L+V +LLL   A 
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL 68
Query: 607 IDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           ++ T  Q   P+H AA+N   ++ ++ L
Sbjct: 69  VNTTGYQNDSPLHDAAKNGHVDIVKLLL 96

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 43/253 (16%)
Query: 381 GGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGAR 440
           G    V+   + + A L    D+ G+T LH+AA +      + LL   A+ N  D  G  
Sbjct: 1   GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT 60
Query: 441 SIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTC 500
            +H A      G+   L++                        +RA DL  +   +G T 
Sbjct: 61  PLHAAVSADAQGVFQILIR------------------------NRATDL-DARMHDGTTP 95
Query: 501 LHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA 560
           L +AA      M+E L+   A++NA D +                 G++ALH AA     
Sbjct: 96  LILAARLAVEGMLEDLINSHADVNAVDDL-----------------GKSALHWAAAVNNV 138
Query: 561 DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHV 620
           D    L+ +  A  D+   R++TPL LAA  G  +  K+LLD  A+ D TD   + P  +
Sbjct: 139 DAAVVLLKN-GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI 197
Query: 621 AAQNNFPEVAQIF 633
           A +    ++ ++ 
Sbjct: 198 AQERMHHDIVRLL 210

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 30/197 (15%)
Query: 327 FLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTV 386
           ++  +   +G T LH +    N  VV+ LL+S   +VD Q +  GY+P+ L       T 
Sbjct: 102 YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRA-GYSPIMLTALATLKTQ 160
Query: 387 ----VGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSI 442
                 L L R  ++   A + G+T L +A +HG + +V+ LL   A++N  D  G+ ++
Sbjct: 161 DDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTAL 220
Query: 443 HTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLH 502
             A  +GH  I                          GLLL+  +  +   D++G T L 
Sbjct: 221 MCACEHGHKEI-------------------------AGLLLAVPSCDISLTDRDGSTALM 255
Query: 503 IAATHGHLQMVEVLLGQ 519
           +A   G  ++  +L  +
Sbjct: 256 VALDAGQSEIASMLYSR 272

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 37/200 (18%)
Query: 401 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQK 460
           AD NG T LH + +H +  +V+ LL  G  +   DK          R G+  I+ T L  
Sbjct: 107 ADSNGNTALHYSVSHANFPVVQQLLDSG--VCKVDKQN--------RAGYSPIMLTALAT 156
Query: 461 GEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 520
            +  D          +  V L L R  ++   A + G+T L +A +HG + +V+ LL   
Sbjct: 157 LKTQD---------DIETV-LQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACE 206
Query: 521 AEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 580
           A++N  D                   G TAL  A  +G+ ++   L+   +  I +    
Sbjct: 207 ADVNVQDDD-----------------GSTALMCACEHGHKEIAGLLLAVPSCDISLTDRD 249
Query: 581 KQTPLHLAAEAGQLQVCKLL 600
             T L +A +AGQ ++  +L
Sbjct: 250 GSTALMVALDAGQSEIASML 269

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 30/168 (17%)
Query: 493 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALH 552
           AD NG T LH + +H +  +V+ LL  G        VC         ++ ++R G + + 
Sbjct: 107 ADSNGNTALHYSVSHANFPVVQQLLDSG--------VCK--------VDKQNRAGYSPIM 150
Query: 553 LAAMNGYADLCRFLVHDHAAVIDILTLRK---------QTPLHLAAEAGQLQVCKLLLDL 603
           L A+            D   V+ +  L           QT L LA   G++ V K LL  
Sbjct: 151 LTALATLK-----TQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLAC 205
Query: 604 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERA 651
            A ++  DD G   +  A ++   E+A + L      ++ T ++   A
Sbjct: 206 EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTA 253

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAF-IN 81
            PL  A  RG++  +   L+N   V+  D+ G +AL+ A   G+  + + L T     +N
Sbjct: 75  NPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQPNIELN 134
Query: 82  SKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 141
            ++++G TALH AA  GYAD+ + L+    A  D+  + K+     A  A     C  LL
Sbjct: 135 QQNKLGDTALHAAAWKGYADIVQLLLA-KGARTDLRNIEKKLAFDXATNA----ACASLL 189
Query: 142 DLGASIDA 149
                 DA
Sbjct: 190 KKKQGTDA 197

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 333 SESGMTPLHLAAYSGNENVVRLLL-NSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           +ES   PLH AA  GN + +R  L N  GV       + G   L+ AC GGH  +V  L 
Sbjct: 70  AESIDNPLHEAAKRGNLSWLRECLDNRVGVN---GLDKAGSTALYWACHGGHKDIVEXLF 126
Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 432
           ++    L   +K G T LH AA  G+  +V++LL +GA  +
Sbjct: 127 TQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTD 167

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 365 AQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
           A+  E+  NPLH A   G+++ +   L     +    DK G T L+ A   GH  +VE L
Sbjct: 67  AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEXL 125
Query: 425 LGQ-GAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTT----------NNLAC 473
             Q   E+N  +K G  ++H AA  G+  I+  LL KG + D+             N AC
Sbjct: 126 FTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDXATNAAC 185
Query: 474 GHV------TVVGLLLSRAADLLQSADKN 496
             +      T     LS A D L   D +
Sbjct: 186 ASLLKKKQGTDAVRTLSNAEDYLDDEDSD 214

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 48/116 (41%), Gaps = 21/116 (18%)
Query: 494 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
           DK G T L+ A   GH  +VE L  Q                    +N ++++G TALH 
Sbjct: 103 DKAGSTALYWACHGGHKDIVEXLFTQ----------------PNIELNQQNKLGDTALHA 146
Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA 609
           AA  GYAD+ + L+    A  D+  + K+     A  A     C  LL      DA
Sbjct: 147 AAWKGYADIVQLLLA-KGARTDLRNIEKKLAFDXATNA----ACASLLKKKQGTDA 197

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 331 LGSESGMTPLHLAAYSGNENVVRLLL-NSAGVQVDAQTQENGYNPLHLACFGGHVTVVGL 389
           +GS+ G   L  AA +G ++ VR+L+ N A V   A   +NG  PLHLA   GH+ VV L
Sbjct: 2   MGSDLGKKLLE-AARAGQDDEVRILMANGADV---AAKDKNGSTPLHLAARNGHLEVVKL 57
Query: 390 LLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
           LL   AD + + DK GKT   I+  +G+  + E+L
Sbjct: 58  LLEAGAD-VNAQDKFGKTAFDISIDNGNEDLAEIL 91

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 18/94 (19%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + DKNG T LH+AA +GHL++V++LL  GA++NA DK    
Sbjct: 16  AGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDK---- 70
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
                         G+TA  ++  NG  DL   L
Sbjct: 71  -------------FGKTAFDISIDNGNEDLAEIL 91

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ--TPLHLAAEAGQLQVCKLLL 601
           S +G+  L  AA  G  D  R L+ + A   D+    K   TPLHLAA  G L+V KLLL
Sbjct: 4   SDLGKKLLE-AARAGQDDEVRILMANGA---DVAAKDKNGSTPLHLAARNGHLEVVKLLL 59
Query: 602 DLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
           + GA ++A D  G+    ++  N   ++A+I 
Sbjct: 60  EAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 91

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 18/94 (19%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + DK+G T LH+AA  GHL++VEVLL  GA++NA DK    
Sbjct: 12  AGQDDEVRILMANGADV-NAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDK---- 66
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
                         G+TA  ++  NG  DL   L
Sbjct: 67  -------------FGKTAFDISIDNGNEDLAEIL 87

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
           AA  G  D  R L+  + A ++       TPLHLAA  G L++ ++LL  GA ++A D  
Sbjct: 9   AARAGQDDEVRILMA-NGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKF 67
Query: 614 GQKPIHVAAQNNFPEVAQIFLRA 636
           G+    ++  N   ++A+I  +A
Sbjct: 68  GKTAFDISIDNGNEDLAEILQKA 90

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 331 LGSESGMTPLHLAAYSGNENVVRLLL-NSAGVQVDAQTQENGYNPLHLACFGGHVTVVGL 389
           +GS+ G   L  AA +G ++ VR+L+ N A V   A   +NG  PLHLA   GH+ VV L
Sbjct: 20  MGSDLGKKLLE-AARAGQDDEVRILMANGADV---AAKDKNGSTPLHLAARNGHLEVVKL 75
Query: 390 LLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
           LL   AD + + DK GKT   I+  +G+  + E+L
Sbjct: 76  LLEAGAD-VXAQDKFGKTAFDISIDNGNEDLAEIL 109

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 18/94 (19%)
Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  AD+  + DKNG T LH+AA +GHL++V++LL  GA++ A DK    
Sbjct: 34  AGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK---- 88
Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
                         G+TA  ++  NG  DL   L
Sbjct: 89  -------------FGKTAFDISIDNGNEDLAEIL 109

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ--TPLHLAAEAGQLQVCKLLL 601
           S +G+  L  AA  G  D  R L+ + A   D+    K   TPLHLAA  G L+V KLLL
Sbjct: 22  SDLGKKLLE-AARAGQDDEVRILMANGA---DVAAKDKNGSTPLHLAARNGHLEVVKLLL 77
Query: 602 DLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
           + GA + A D  G+    ++  N   ++A+I 
Sbjct: 78  EAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 103/249 (41%), Gaps = 43/249 (17%)
Query: 385 TVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHT 444
           +V+   + + A L    D+ G+T LH+AA +      + LL   A+    D  G   +H 
Sbjct: 2   SVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHA 61
Query: 445 AARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIA 504
           A      G+   LL+                        +RA DL  +   +G T L +A
Sbjct: 62  AVSADAQGVFQILLR------------------------NRATDL-DARMHDGTTPLILA 96
Query: 505 ATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCR 564
           A      M+E L+   A++NA D +                 G++ALH AA     D   
Sbjct: 97  ARLALEGMLEDLINSHADVNAVDDL-----------------GKSALHWAAAVNNVDAAV 139
Query: 565 FLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQN 624
            L+ +  A  D+   +++TPL LAA  G  +  K+LLD  A+ D TD   + P  +A + 
Sbjct: 140 VLLKN-GANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQER 198
Query: 625 NFPEVAQIF 633
              ++ ++ 
Sbjct: 199 MHHDIVRLL 207

>pdb|2RFA|A Chain A, Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat Domain Length = 232

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 122 QTPLHLAAEAGQLQ-VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
           ++PL LAA+   +Q + KLL   G  +      G+  +H+AA  +  E A + + A P L
Sbjct: 4   ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPEL 63
Query: 181 V----TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISAR-----------NRVTEA 225
           V    T+   +G T  HIA +  +V ++  L+   R   +SAR           N +   
Sbjct: 64  VFEPMTSELYEGQTALHIAVINQNVNLVRALLA--RGASVSARATGSVFHYRPHNLIYYG 121
Query: 226 T-PLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHL 263
             PL  AA  G   +VR+L++ GA    ++  G T +H+
Sbjct: 122 EHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHI 160

>pdb|2RFA|A Chain A, Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat Domain Length = 232

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 23/162 (14%)
Query: 263 LAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDP 321
           LAA+    Q L ++   +   V+ +  +G TALH+AA +   +    L+   P  V  +P
Sbjct: 9   LAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELV-FEP 67
Query: 322 PTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQEN----------- 370
            T   +        G T LH+A  + N N+VR LL + G  V A+   +           
Sbjct: 68  MTSELY-------EGQTALHIAVINQNVNLVRALL-ARGASVSARATGSVFHYRPHNLIY 119
Query: 371 -GYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHI 411
            G +PL  A   G   +V LL+   AD +++ D  G T LHI
Sbjct: 120 YGEHPLSFAACVGSEEIVRLLIEHGAD-IRAQDSLGNTVLHI 160

>pdb|2RFA|A Chain A, Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat Domain Length = 232

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 20/171 (11%)
Query: 338 TPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADL 397
           +PL LAA   +   +  LL   G +V  Q    G   LH+A    ++    +L+  A +L
Sbjct: 5   SPLLLAAKENDVQALSKLLKFEGCEVH-QRGAMGETALHIAALYDNLEAAMVLMEAAPEL 63
Query: 398 ----LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGI 453
               + S    G+T LHIA  + ++ +V  LL +GA ++A   G                
Sbjct: 64  VFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRP--------- 114
Query: 454 INTLLQKGEKVDVTTNNLAC-GHVTVVGLLLSRAADLLQSADKNGKTCLHI 503
            + L+  GE      +  AC G   +V LL+   AD +++ D  G T LHI
Sbjct: 115 -HNLIYYGEH---PLSFAACVGSEEIVRLLIEHGAD-IRAQDSLGNTVLHI 160

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 262 HLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDP 321
            LAAQ   +Q+ E +R    L     + G T L  A+ FG+ +TVR LL        +DP
Sbjct: 8   QLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW-----GADP 62
Query: 322 PTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQE-NGYNPLHLACF 380
                    + ++   + L LA+  G  ++V LLL      VD    + NG  PL  A  
Sbjct: 63  --------HILAKERESALSLASTGGYTDIVGLLLER---DVDINIYDWNGGTPLLYAVR 111
Query: 381 GGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
           G HV  V  LL+R ADL   AD +G T + +A   G+ ++ +V+
Sbjct: 112 GNHVKCVEALLARGADLTTEAD-SGYTPMDLAVALGYRKVQQVI 154

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Query: 391 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGH 450
           L +  +L+   D+ G T L  A+  G ++ V  LL  GA+ +   K    ++  A+  G+
Sbjct: 22  LRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81
Query: 451 VGIINTLLQKGEKVDVTTNN--------LACGHVTVVGLLLSRAADLLQSADKNGKTCLH 502
             I+  LL++   +++   N        +   HV  V  LL+R ADL   AD +G T + 
Sbjct: 82  TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD-SGYTPMD 140
Query: 503 IAATHGHLQMVEVL 516
           +A   G+ ++ +V+
Sbjct: 141 LAVALGYRKVQQVI 154

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 483 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINS 542
           L +  +L+   D+ G T L  A+  G ++ V  LL  GA+                 I +
Sbjct: 22  LRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD---------------PHILA 66
Query: 543 KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 602
           K R   +AL LA+  GY D+   L+ +    I+I      TPL  A     ++  + LL 
Sbjct: 67  KER--ESALSLASTGGYTDIVGLLL-ERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123
Query: 603 LGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
            GA +    D G  P+ +A    + +V Q+ 
Sbjct: 124 RGADLTTEADSGYTPMDLAVALGYRKVQQVI 154

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 262 HLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDP 321
            LAAQ   +Q+ E +R    L     + G T L  A+ FG+ +TVR LL        +DP
Sbjct: 8   QLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW-----GADP 62
Query: 322 PTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQE-NGYNPLHLACF 380
                    + ++   + L LA+  G  ++V LLL      VD    + NG  PL  A  
Sbjct: 63  --------HILAKERESALSLASTGGYTDIVGLLLER---DVDINIYDWNGGTPLLYAVH 111
Query: 381 GGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
           G HV  V  LL+R ADL   AD +G T + +A   G+ ++ +V+
Sbjct: 112 GNHVKCVEALLARGADLTTEAD-SGYTPMDLAVALGYRKVQQVI 154

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 483 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINS 542
           L +  +L+   D+ G T L  A+  G ++ V  LL  GA+                 I +
Sbjct: 22  LRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD---------------PHILA 66
Query: 543 KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 602
           K R   +AL LA+  GY D+   L+ +    I+I      TPL  A     ++  + LL 
Sbjct: 67  KER--ESALSLASTGGYTDIVGLLL-ERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLA 123
Query: 603 LGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
            GA +    D G  P+ +A    + +V Q+ 
Sbjct: 124 RGADLTTEADSGYTPMDLAVALGYRKVQQVI 154

>pdb|1OY3|D Chain D, Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 104/265 (39%), Gaps = 42/265 (15%)
Query: 185 TKDGNTCAHIAAMQGSVGVIEELMKFDRS-GVISARNRVTEATPLQLAAEGGHANVVRVL 243
           T+DG+T  H+A +      ++ L+ F      +  +N + + T L LAA  G A+ V  L
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQ-TALHLAAILGEASTVEKL 64
Query: 244 VKAGASCTDENKTGFTAVHLAAQ-NGHNQ--VLEEMRSSKALNVYSKKLGVTALHVAAYF 300
             AGA      + G TA+HLA +   H    VL + R S   +               Y 
Sbjct: 65  YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASD-----------TYL 113
Query: 301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
            Q+       SH P  V S P                           EN          
Sbjct: 114 TQSQDCTPDTSHAPAAVDSQP-------------------------NPENEEEPRDEDWR 148
Query: 361 VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
           +Q++A+   +G+ PLH+A       +V LL    ADL +     G+T LH+A       +
Sbjct: 149 LQLEAENY-DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASV 207
Query: 421 VEVLLGQGAEINATDKGGARSIHTA 445
           +E+LL  GA+  A   GG   + +A
Sbjct: 208 LELLLKAGADPTARMYGGRTPLGSA 232

>pdb|1OY3|D Chain D, Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 107/292 (36%), Gaps = 74/292 (25%)
Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAA--DLLQSADKNGKTCLHIAATHGHLQMVEVLLG 426
           E+G   LHLA    H   +  LL  +A  + L   +  G+T LH+AA  G    VE L  
Sbjct: 7   EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA 66
Query: 427 QGAEINATDKGGARSIHTAARYGHVGIINTLLQ--KGEKVDVT----TNNLACGHVTVVG 480
            GA +   ++GG  ++H A R         LLQ       D +    T +  C   T   
Sbjct: 67  AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHA 126
Query: 481 LLL------------SRAAD---LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 525
                           R  D    L++ + +G T LH+A  H   +MV +L   GA++N 
Sbjct: 127 PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK 186
Query: 526 TDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 585
            +  C                GRT                                  PL
Sbjct: 187 PEPTC----------------GRT----------------------------------PL 196
Query: 586 HLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 637
           HLA EA    V +LLL  GA   A    G+ P+  A     P +A++ LRAH
Sbjct: 197 HLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARL-LRAH 247

>pdb|1K3Z|D Chain D, X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 104/265 (39%), Gaps = 42/265 (15%)
Query: 185 TKDGNTCAHIAAMQGSVGVIEELMKFDRS-GVISARNRVTEATPLQLAAEGGHANVVRVL 243
           T+DG+T  H+A +      ++ L+ F      +  +N + + T L LAA  G A+ V  L
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQ-TALHLAAILGEASTVEKL 64
Query: 244 VKAGASCTDENKTGFTAVHLAAQ-NGHNQ--VLEEMRSSKALNVYSKKLGVTALHVAAYF 300
             AGA      + G TA+HLA +   H    VL + R S   +               Y 
Sbjct: 65  YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASD-----------TYL 113
Query: 301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
            Q+       SH P  V S P                           EN          
Sbjct: 114 TQSQDCTPDTSHAPAAVDSQP-------------------------NPENEEEPRDEDWR 148
Query: 361 VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
           +Q++A+   +G+ PLH+A       +V LL    ADL +     G+T LH+A       +
Sbjct: 149 LQLEAENY-DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASV 207
Query: 421 VEVLLGQGAEINATDKGGARSIHTA 445
           +E+LL  GA+  A   GG   + +A
Sbjct: 208 LELLLKAGADPTARMYGGRTPLGSA 232

>pdb|1K3Z|D Chain D, X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 107/292 (36%), Gaps = 74/292 (25%)
Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAA--DLLQSADKNGKTCLHIAATHGHLQMVEVLLG 426
           E+G   LHLA    H   +  LL  +A  + L   +  G+T LH+AA  G    VE L  
Sbjct: 7   EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA 66
Query: 427 QGAEINATDKGGARSIHTAARYGHVGIINTLLQ--KGEKVDVT----TNNLACGHVTVVG 480
            GA +   ++GG  ++H A R         LLQ       D +    T +  C   T   
Sbjct: 67  AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHA 126
Query: 481 LLL------------SRAAD---LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 525
                           R  D    L++ + +G T LH+A  H   +MV +L   GA++N 
Sbjct: 127 PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK 186
Query: 526 TDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 585
            +  C                GRT                                  PL
Sbjct: 187 PEPTC----------------GRT----------------------------------PL 196
Query: 586 HLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 637
           HLA EA    V +LLL  GA   A    G+ P+  A     P +A++ LRAH
Sbjct: 197 HLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARL-LRAH 247

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           AA  G+   VR LL+   V  DA  +  G   L +  FG     + LL   A+  +Q  D
Sbjct: 15  AAARGDVQEVRRLLHRELVHPDALNR-FGKTALQVMMFGSPAVALELLKQGASPNVQ--D 71
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTL 457
            +G + +H AA  G L  ++VL+  GA++NA D  G+  IH A R GH  +++ L
Sbjct: 72  ASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFL 126

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           AA  G+   VR LL+   V  DA  +  G   L +  FG     + LL   A+  +Q  D
Sbjct: 17  AAARGDVQEVRRLLHRELVHPDALNR-FGKTALQVMMFGSPAVALELLKQGASPNVQ--D 73
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTL 457
            +G + +H AA  G L  ++VL+  GA++NA D  G+  IH A R GH  +++ L
Sbjct: 74  ASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFL 128

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 340 LHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQ 399
           L+LA     ENV+              T E G+ PL  A   G + VV  LL   AD  Q
Sbjct: 33  LYLATRIEQENVIN------------HTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQ 79
Query: 400 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ 459
              K  ++ L +A + G+  +V++LL  G ++N  D  G   +  A    HV  +  LL+
Sbjct: 80  LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 139
Query: 460 KGEKVDVTTNN--------LACGHVTVVGLLLSRAADLLQS 492
            G    + T++        +A G+ +V  ++ S    LLQ+
Sbjct: 140 SGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQN 180

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 488 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVG 547
           +++   D+ G T L  AA HG + +VE LL  GA+     K                  G
Sbjct: 43  NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK------------------G 84
Query: 548 R-TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
           R +AL LA   GY D+ + L+ D    ++       TPL  A     ++  K+LL+ GA 
Sbjct: 85  RESALSLACSKGYTDIVKMLL-DCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD 143
Query: 607 IDATDDQGQKPIHVAAQNNFPEVAQIF 633
                D G   + +A    +  V Q+ 
Sbjct: 144 PTIETDSGYNSMDLAVALGYRSVQQVI 170

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 340 LHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQ 399
           L+LA     ENV+              T E G+ PL  A   G + VV  LL   AD  Q
Sbjct: 15  LYLATRIEQENVIN------------HTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQ 61
Query: 400 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ 459
              K  ++ L +A + G+  +V++LL  G ++N  D  G   +  A    HV  +  LL+
Sbjct: 62  LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 121
Query: 460 KGEKVDVTTNN--------LACGHVTVVGLLLSRAADLLQS 492
            G    + T++        +A G+ +V  ++ S    LLQ+
Sbjct: 122 SGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQN 162

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 488 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVG 547
           +++   D+ G T L  AA HG + +VE LL  GA+     K                  G
Sbjct: 25  NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK------------------G 66
Query: 548 R-TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
           R +AL LA   GY D+ + L+ D    ++       TPL  A     ++  K+LL+ GA 
Sbjct: 67  RESALSLACSKGYTDIVKMLL-DCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD 125
Query: 607 IDATDDQGQKPIHVAAQNNFPEVAQIF 633
                D G   + +A    +  V Q+ 
Sbjct: 126 PTIETDSGYNSMDLAVALGYRSVQQVI 152

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 340 LHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQ 399
           L+LA     ENV+              T E G+ PL  A   G + VV  LL   AD  Q
Sbjct: 17  LYLATRIEQENVIN------------HTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQ 63
Query: 400 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ 459
              K  ++ L +A + G+  +V++LL  G ++N  D  G   +  A    HV  +  LL+
Sbjct: 64  LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123
Query: 460 KGEKVDVTTNN--------LACGHVTVVGLLLSRAADLLQS 492
            G    + T++        +A G+ +V  ++ S    LLQ+
Sbjct: 124 SGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQN 164

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 488 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVG 547
           +++   D+ G T L  AA HG + +VE LL  GA+     K                  G
Sbjct: 27  NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK------------------G 68
Query: 548 R-TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
           R +AL LA   GY D+ + L+ D    ++       TPL  A     ++  K+LL+ GA 
Sbjct: 69  RESALSLACSKGYTDIVKMLL-DCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD 127
Query: 607 IDATDDQGQKPIHVAAQNNFPEVAQIF 633
                D G   + +A    +  V Q+ 
Sbjct: 128 PTIETDSGYNSMDLAVALGYRSVQQVI 154

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           AA  G+   VR LL+   V  DA  +  G   L +  FG     + LL   A+  +Q  D
Sbjct: 15  AAARGDVQEVRRLLHRELVHPDALNR-FGKTALQVMMFGSTAIALELLKQGASPNVQ--D 71
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTL 457
            +G + +H AA  G L  ++VL+  GA++N  D  GA  IH A + GH  +++ L
Sbjct: 72  TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 126

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 22/166 (13%)
Query: 490 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA----------------L 533
           +   D  G T L+IA  +  +++ + L+ +GA+IN  + + D+                +
Sbjct: 32  VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYM 91
Query: 534 LTHKA-FINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA--- 589
           L H    +N  +R G  AL  AA  G+ D  + L+ D    ID       T L  A    
Sbjct: 92  LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLR 151
Query: 590 EAGQL--QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
           E  QL   + KLL++ GA     D+ G+  +  A Q  + E+++I 
Sbjct: 152 EGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKIL 197

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           AA  G+   VR LL+   V  DA     G   L +  FG     + LL   A+  +Q  D
Sbjct: 9   AAARGDVQEVRRLLHRELVHPDA-LNRFGKTALQVMMFGSTAIALELLKQGASPNVQ--D 65
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTL 457
            +G + +H AA  G L  ++VL+  GA++N  D  GA  IH A + GH  +++ L
Sbjct: 66  TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
           AA  G L+   +LL +   +N+++  GRTAL +  + G  ++ R L+    A  D+    
Sbjct: 12  AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLL-RGANPDLKDRT 69
Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
               +H AA AGQL   + LL+  A ++  D++G  P+H+AA+     V +  ++   S 
Sbjct: 70  GFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSG 214
           V      G+T   +A + G   V+  LM+ + +G
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVV-SLMQANGAG 162

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 32  GHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTAL 91
           G+ E+   +L   A  D+ D+ G + +H AA  G+L     LL  +A +N +   G   L
Sbjct: 48  GNPEIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPL 107
Query: 92  HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146
           HLAA  G+  +  FLV   A+ +     +  T   LA   G+ +V  L+   GA 
Sbjct: 108 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
           AA  G L+   +LL +   +N+++  GRTAL +  + G  ++ R L+    A  D+    
Sbjct: 12  AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLL-RGANPDLKDRT 69
Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
               +H AA AG L   + LL+  A ++  D++G  P+H+AA+     V +  ++   S 
Sbjct: 70  GNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSG 214
           V      G+T   +A + G   V+  LM+ + +G
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVV-SLMQANGAG 162

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 55/115 (47%)
Query: 32  GHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTAL 91
           G+ E+   +L   A  D+ D+ G + +H AA  G+L     LL ++A +N +   G   L
Sbjct: 48  GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPL 107
Query: 92  HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146
           HLAA  G+  +  FLV   A+ +     +  T   LA   G+ +V  L+   GA 
Sbjct: 108 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
           AA  G L+   +LL +   +N+++  GRTAL +  + G  ++ R L+    A  D+    
Sbjct: 12  AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLL-RGANPDLKDRT 69
Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
               +H AA AG L   + LL+  A ++  D++G  P+H+AA+     V +  ++   S 
Sbjct: 70  GFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSG 214
           V      G+T   +A + G   V+  LM+ + +G
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVV-SLMQANGAG 162

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 32  GHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTAL 91
           G+ E+   +L   A  D+ D+ G + +H AA  G+L     LL  +A +N +   G   L
Sbjct: 48  GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPL 107
Query: 92  HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146
           HLAA  G+  +  FLV   A+ +     +  T   LA   G+ +V  L+   GA 
Sbjct: 108 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
           AA  G L+   +LL +   +N+++  GRTAL +  + G  ++ R L+    A  D+    
Sbjct: 12  AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLL-RGANPDLKDRT 69
Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
               +H AA AG L   + LL+  A ++  D++G  P+H+AA+     V +  ++   S 
Sbjct: 70  GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSG 214
           V      G+T   +A + G   V+  LM+ + +G
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVV-SLMQANGAG 162

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 32  GHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTAL 91
           G+ E+   +L   A  D+ D+ G + +H AA  G+L     LL  +A +N +   G   L
Sbjct: 48  GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPL 107
Query: 92  HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146
           HLAA  G+  +  FLV   A+ +     +  T   LA   G+ +V  L+   GA 
Sbjct: 108 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
           AA  G L+   +LL +   +N+++  GRTAL +  + G  ++ R L+    A  D+    
Sbjct: 12  AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLL-RGANPDLKDRT 69
Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
               +H AA AG L   + LL+  A ++  D++G  P+H+AA+     V +  ++   S 
Sbjct: 70  GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSG 214
           V      G+T   +A + G   V+  LM+ + +G
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVV-SLMQANGAG 162

>pdb|3LJN|A Chain A, Ankyrin Repeat Protein From Leishmania Major Length = 364

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 105/281 (37%), Gaps = 62/281 (22%)
Query: 252 DENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLS 311
           DEN      +H+AA+ G    +  +  +        + G TALH+A  FG  DT + L S
Sbjct: 18  DEN---XEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLAS 74
Query: 312 HVPGTVKSDPPTGASFLGELGS-ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQEN 370
                           +GE+ S   G  P+HLA  +   ++V  L+  A        +E 
Sbjct: 75  ----------------VGEVHSLWHGQKPIHLAVXANKTDLVVALVEGA--------KER 110
Query: 371 GYNPLHL--ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG--HLQMVEVLLG 426
           G  P  L   C    V  +G  +             G+T LH     G  +L+ +++L+ 
Sbjct: 111 GQXPESLLNECDEREVNEIGSHVKHC---------KGQTALHWCVGLGPEYLEXIKILVQ 161
Query: 427 QGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRA 486
            GA   A DK     +  A  +          +  E +D+  + +            S++
Sbjct: 162 LGASPTAKDKADETPLXRAXEF----------RNREALDLXXDTVP-----------SKS 200
Query: 487 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 527
           +  L  A+K G + LH A       +    +  G ++N  D
Sbjct: 201 SLRLDYANKQGNSHLHWAILINWEDVAXRFVEXGIDVNXED 241

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           + G+  LH AA  G L+++E LL +GA+INA DK     + +A   GHV  +  LL KG
Sbjct: 33  EGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKG 91

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           + G+  LH AA  G L+++E LL +GA+INA DK     + +A   GHV  +  LL KG
Sbjct: 38  EGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKG 96

>pdb|1YMP|A Chain A, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold Length = 135

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           L+ +   G TPL++A       ++  ++N+HA V+  D  G+SALH AA    +     L
Sbjct: 8   LDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 67
Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           L + A  + ++    T L LAA  G  +  + L+ DH A  DI     + P  +A E   
Sbjct: 68  LKNGANKDMQNNKEETPLFLAAREGSYETAKVLL-DHFANRDITDHMDRLPRDIAQERMH 126
Query: 134 LQVCKLL 140
             + +LL
Sbjct: 127 HDIVRLL 133

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 353 RLLLNSAGVQVDAQTQENGYNPLHLA-----CFGGHVTVVGLLLSRAADLLQSADKNGKT 407
           R  L   G +  A      +NPL LA        G   +V  ++    D     D+ G T
Sbjct: 14  RTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDE-GIT 72
Query: 408 CLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
            LH A   GH ++V+ L+  G  +NA D  G   +H AA   +V +   L++ G  V
Sbjct: 73  ALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129

>pdb|1SW6|A Chain A, S. Cerevisiae Swi6 Ankyrin-Repeat Fragment Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 395 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAA 446
           A++L + D NG TCL+IAA  G++ +V+ LL  GA+    +K G R +   A
Sbjct: 273 ANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Query: 353 RLLLNSAGVQVDAQTQENGYNPLHL---ACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
           R  L   G +  A      +NPL L   +   G   +V  ++    D     D+ G T L
Sbjct: 16  RTNLRKTGSERIAHGMRVKFNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDE-GITAL 74
Query: 410 HIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           H A   GH ++V+ L+  G  +NA D  G   +H AA   +V +   L++ G  V
Sbjct: 75  HNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129

>pdb|3UI2|A Chain A, Crystal Structure Of The Cpsrp54 Tail Bound To Cpsrp43 Length = 244

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 338 TPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADL 397
           TP   AA   +E  +  LL      VDA   ENG   L      G    V LL    ADL
Sbjct: 47  TPWWTAARKADEQALSQLLEDR--DVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGADL 103
Query: 398 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTA 445
                + G T LH+AA +   ++VE L+  GA+I   D+ G  ++  A
Sbjct: 104 DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELA 151

>pdb|3DEO|A Chain A, Structural Basis For Specific Substrate Recognition By The Chloroplast Signal Recognition Particle Protein Cpsrp43 Length = 183

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 338 TPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADL 397
           TP   AA   +E  +  LL      VDA   ENG   L      G    V LL    ADL
Sbjct: 46  TPWWTAARKADEQALSQLLEDR--DVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGADL 102
Query: 398 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTA 445
                + G T LH+AA +   ++VE L+  GA+I   D+ G  ++  A
Sbjct: 103 DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELA 150

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	1015
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-115
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-113
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-111
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-75
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-65
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-26
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-23
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-83
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-79
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-77
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-64
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-51
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-49
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-19
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-77
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-77
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-74
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-72
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-72
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-70
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-57
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-50
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-42
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-31
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-20
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-72
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-70
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	6e-67
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-65
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-65
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-53
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-34
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-10
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	9e-72
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-65
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-58
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-57
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-28
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-70
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-64
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-61
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-60
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-57
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	9e-53
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-40
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-32
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-68
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-63
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-60
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-56
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	9e-53
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-68
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	9e-61
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-60
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-57
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-53
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	7e-44
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-40
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-28
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-68
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	7e-61
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-60
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-55
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-55
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-48
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-36
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-33
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-26
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	8e-67
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-59
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	7e-54
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-50
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-48
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-48
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-18
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-63
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-61
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-60
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	9e-52
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	6e-50
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-38
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-37
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-63
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-60
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-50
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-45
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-44
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-40
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-30
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-10
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-62
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	9e-61
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-56
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-54
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	7e-50
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	6e-34
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-31
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-30
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-61
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	7e-61
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	9e-53
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-51
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-50
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-50
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-38
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-09
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-59
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-50
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-49
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	5e-45
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	5e-44
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-40
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-35
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-57
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-54
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-53
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-51
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	9e-50
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-47
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-43
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	8e-42
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-31
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-56
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	6e-55
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-47
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-42
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-41
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-38
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-36
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-17
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	8e-52
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-46
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	6e-46
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-44
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	8e-43
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-37
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-36
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	8e-34
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-33
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-33
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-33
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-51
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-49
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	6e-49
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-47
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	9e-47
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-44
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-18
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-50
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-49
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-43
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-35
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-32
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	8e-32
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-16
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	5e-06
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-50
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-46
3v30_A	172	DNA-binding protein rfxank; structural genomics co	8e-46
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-45
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-42
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-39
3v30_A	172	DNA-binding protein rfxank; structural genomics co	8e-35
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-33
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-16
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-50
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-48
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-47
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-40
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-37
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-35
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	9e-30
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-20
2rfa_A	232	Transient receptor potential cation channel subfa	4e-50
2rfa_A	232	Transient receptor potential cation channel subfa	2e-46
2rfa_A	232	Transient receptor potential cation channel subfa	1e-42
2rfa_A	232	Transient receptor potential cation channel subfa	4e-38
2rfa_A	232	Transient receptor potential cation channel subfa	5e-37
2rfa_A	232	Transient receptor potential cation channel subfa	5e-26
2rfa_A	232	Transient receptor potential cation channel subfa	3e-16
2rfa_A	232	Transient receptor potential cation channel subfa	9e-15
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	8e-49
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-47
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-39
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-37
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-35
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	7e-33
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-30
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-47
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-43
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-39
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-38
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-35
3hra_A	201	Ankyrin repeat family protein; structural protein;	7e-35
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-31
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-19
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-17
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-46
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	9e-42
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-41
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-36
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-35
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-22
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-46
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	6e-44
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-43
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-43
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-38
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	7e-35
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-33
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-32
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-16
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-09
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-43
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-43
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	9e-41
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-39
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-37
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-35
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	8e-32
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-09
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	7e-43
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-40
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-35
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-33
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	5e-33
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-31
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-29
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-42
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-37
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-36
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-35
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	9e-34
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-31
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-28
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-28
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-27
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-11
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-42
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-38
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-38
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-37
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-33
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	5e-33
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	5e-29
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	8e-28
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	9e-28
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-21
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-18
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-42
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-40
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	8e-39
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-37
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-35
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-31
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	4e-31
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-27
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	6e-26
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-41
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	9e-40
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-37
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	8e-36
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-31
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-27
2pnn_A	273	Transient receptor potential cation channel subfa	4e-41
2pnn_A	273	Transient receptor potential cation channel subfa	6e-41
2pnn_A	273	Transient receptor potential cation channel subfa	3e-35
2pnn_A	273	Transient receptor potential cation channel subfa	7e-34
2pnn_A	273	Transient receptor potential cation channel subfa	6e-30
2pnn_A	273	Transient receptor potential cation channel subfa	1e-24
2pnn_A	273	Transient receptor potential cation channel subfa	6e-20
2pnn_A	273	Transient receptor potential cation channel subfa	1e-15
2pnn_A	273	Transient receptor potential cation channel subfa	6e-12
2pnn_A	273	Transient receptor potential cation channel subfa	4e-09
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-41
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-37
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	9e-37
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-34
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-32
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-30
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-30
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-29
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-40
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-40
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-36
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-34
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-33
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-32
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-17
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	8e-12
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-04
2etb_A	256	Transient receptor potential cation channel subfam	1e-39
2etb_A	256	Transient receptor potential cation channel subfam	4e-37
2etb_A	256	Transient receptor potential cation channel subfam	1e-35
2etb_A	256	Transient receptor potential cation channel subfam	6e-33
2etb_A	256	Transient receptor potential cation channel subfam	8e-33
2etb_A	256	Transient receptor potential cation channel subfam	3e-27
2etb_A	256	Transient receptor potential cation channel subfam	7e-20
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-39
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-38
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-38
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-37
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-37
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-33
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-29
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-29
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	7e-22
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-39
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-35
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-35
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-34
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	8e-33
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-31
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-25
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-24
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-21
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-20
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-11
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	6e-39
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	9e-28
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-25
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	4e-11
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	8e-11
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-09
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-36
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	7e-33
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-32
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-32
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	9e-31
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-28
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-27
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-23
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-22
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-35
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-34
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	5e-34
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-32
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	5e-31
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-30
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	6e-30
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	8e-26
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-25
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-11
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-35
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-35
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	9e-35
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	6e-32
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	9e-32
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	6e-31
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	5e-29
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-26
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	7e-23
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	9e-10
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-34
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-33
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-31
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-28
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-27
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	5e-22
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-20
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-20
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-09
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-32
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-26
3jxi_A	260	Vanilloid receptor-related osmotically activated p	9e-23
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-19
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-18
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-32
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-31
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-30
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-30
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	8e-27
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-25
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-23
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-23
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	8e-22
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	8e-20
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	8e-32
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	9e-32
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-30
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	7e-26
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	8e-25
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-24
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-22
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-19
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-17
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-15
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-12
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	8e-28
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-27
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-26
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-24
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-22
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-20
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-20
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-20
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-18
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	6e-18
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-12
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-12
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-12
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-25
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	6e-25
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-24
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-22
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-19
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-18
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	6e-18
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	7e-18
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-16
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-14
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-14
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-07
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-15
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-15
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-13
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-13
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-13
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	5e-10
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	6e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-07
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	5e-07
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-06
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	5e-15
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-14
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	5e-12
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	5e-11
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	9e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-07
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-06
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-05
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-05
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-04
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-14
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-14
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-13
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-11
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	6e-11
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	6e-11
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-09
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-07
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	8e-06
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-04
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-12
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	9e-12
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	3e-10
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	5e-09
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-06
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-04
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-04
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	7e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  359 bits (925), Expect = e-115
 Identities = 142/547 (25%), Positives = 219/547 (40%), Gaps = 116/547 (21%)

Query: 76  HKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQ 135
                      G T LH+A+  G+  + + L+    A  ++  ++ +TPLH+AA AG  +
Sbjct: 3   PGISGGGGGESGLTPLHVASFMGHLPIVKNLL-QRGASPNVSNVKVETPLHMAARAGHTE 61

Query: 136 VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIA 195
           V K LL   A ++A     Q P+H AA+     + ++ L  + +     T  G+T     
Sbjct: 62  VAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLL-ENNANPNLATTAGHT----- 115

Query: 196 AMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENK 255
                                          PL +AA  GH   V  L++  AS     K
Sbjct: 116 -------------------------------PLHIAAREGHVETVLALLEKEASQACMTK 144

Query: 256 TGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSHVP 314
            GFT +H+AA+ G  +V E +    A +  +  K G+T LHVA +    D V+ LL    
Sbjct: 145 KGFTPLHVAAKYGKVRVAELLLERDA-HPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR-- 201

Query: 315 GTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNP 374
                    G S      + +G TPLH+AA      V R LL   G   +A++   G  P
Sbjct: 202 ---------GGSP--HSPAWNGYTPLHIAAKQNQVEVARSLL-QYGGSANAES-VQGVTP 248

Query: 375 LHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT 434
           LHLA   GH  +V LLLS+ A+     +K+G T LH+ A  GH+ + +VL+  G  ++AT
Sbjct: 249 LHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDAT 307

Query: 435 DKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSAD 494
            + G   +H A+ YG++ ++  LLQ    V+                             
Sbjct: 308 TRMGYTPLHVASHYGNIKLVKFLLQHQADVNAK--------------------------T 341

Query: 495 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLA 554
           K G + LH AA  GH  +V +LL  GA  N                      G T L +A
Sbjct: 342 KLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSS-----------------DGTTPLAIA 384

Query: 555 AMNGYADLCRFL--VHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD 612
              GY  +   L  V D  + + +    + +                +LD+        D
Sbjct: 385 KRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETV---------DEILDVSE------D 429

Query: 613 QGQKPIH 619
           +G++ I 
Sbjct: 430 EGEELIS 436

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  355 bits (913), Expect = e-113
 Identities = 137/477 (28%), Positives = 219/477 (45%), Gaps = 58/477 (12%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
                 G TPL +A   GH+ +V  +L   A  +V + +  + LH+AA  G+ +V   LL
Sbjct: 8   GGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLL 67

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
            +KA +N+K++  +T LH AA  G+ ++ + L+ ++ A  ++ T    TPLH+AA  G +
Sbjct: 68  QNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLL-ENNANPNLATTAGHTPLHIAAREGHV 126

Query: 135 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHI 194
           +    LL+  AS      +G  P+HVAA+     VA++ L    +   A  K+G      
Sbjct: 127 ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLL-ERDAHPNAAGKNGL----- 180

Query: 195 AAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDEN 254
                                          TPL +A    + ++V++L+  G S     
Sbjct: 181 -------------------------------TPLHVAVHHNNLDIVKLLLPRGGSPHSPA 209

Query: 255 KTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSHV 313
             G+T +H+AA+    +V   +      +  ++   GVT LH+AA  G A+ V  LLS  
Sbjct: 210 WNGYTPLHIAAKQNQVEVARSLLQYGG-SANAESVQGVTPLHLAAQEGHAEMVALLLSK- 267

Query: 314 PGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYN 373
                      A+    LG++SG+TPLHL A  G+  V  +L+   GV VDA T   GY 
Sbjct: 268 ----------QANG--NLGNKSGLTPLHLVAQEGHVPVADVLI-KHGVMVDATT-RMGYT 313

Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
           PLH+A   G++ +V  LL   AD + +  K G + LH AA  GH  +V +LL  GA  N 
Sbjct: 314 PLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE 372

Query: 434 TDKGGARSIHTAARYGHVGIINTLLQKGEKV-DVT-TNNLACGHVTVVGLLLSRAAD 488
               G   +  A R G++ + + L    ++   V  ++         V  +L  + D
Sbjct: 373 VSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETVDEILDVSED 429

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  350 bits (901), Expect = e-111
 Identities = 138/448 (30%), Positives = 212/448 (47%), Gaps = 51/448 (11%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
           TPL +A+  GH  +V+ L++ GAS    N    T +H+AA+ GH +V + +  +KA  V 
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA-KVN 74

Query: 286 SK-KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAA 344
           +K K   T LH AA  G  + V+ LL +            A+    L + +G TPLH+AA
Sbjct: 75  AKAKDDQTPLHCAARIGHTNMVKLLLEN-----------NANP--NLATTAGHTPLHIAA 121

Query: 345 YSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKN 404
             G+   V  LL          T + G+ PLH+A   G V V  LLL R A    +A KN
Sbjct: 122 REGHVETVLALL-EKEASQACMT-KKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKN 178

Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           G T LH+A  H +L +V++LL +G   ++    G   +H AA+   V +  +LLQ G   
Sbjct: 179 GLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA 238

Query: 465 DVTTNN------LAC--GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 516
           +  +        LA   GH  +V LLLS+ A+     +K+G T LH+ A  GH+ + +VL
Sbjct: 239 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVL 297

Query: 517 LGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDI 576
           +  G  ++AT ++                 G T LH+A+  G   L +FL+  H A ++ 
Sbjct: 298 IKHGVMVDATTRM-----------------GYTPLHVASHYGNIKLVKFLL-QHQADVNA 339

Query: 577 LTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR- 635
            T    +PLH AA+ G   +  LLL  GAS +     G  P+ +A +  +  V  +    
Sbjct: 340 KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVV 399

Query: 636 -AHPSLVTATTKEK----ERAKDLIAAG 658
               S V  + K +    E   +++   
Sbjct: 400 TDETSFVLVSDKHRMSFPETVDEILDVS 427

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  253 bits (650), Expect = 2e-75
 Identities = 92/301 (30%), Positives = 132/301 (43%), Gaps = 47/301 (15%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
           ESG+TPLH+A++ G+  +V+ LL   G   +         PLH+A   GH  V   LL  
Sbjct: 12  ESGLTPLHVASFMGHLPIVKNLL-QRGASPNVSN-VKVETPLHMAARAGHTEVAKYLLQN 69

Query: 394 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGI 453
            A +  +  K+ +T LH AA  GH  MV++LL   A  N     G   +H AAR GHV  
Sbjct: 70  KAKV-NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVET 128

Query: 454 INTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 513
           +  LL+K                                  K G T LH+AA +G +++ 
Sbjct: 129 VLALLEKEASQA--------------------------CMTKKGFTPLHVAAKYGKVRVA 162

Query: 514 EVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV 573
           E+LL + A  NA  K                  G T LH+A  +   D+ + L+      
Sbjct: 163 ELLLERDAHPNAAGKN-----------------GLTPLHVAVHHNNLDIVKLLL-PRGGS 204

Query: 574 IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
                    TPLH+AA+  Q++V + LL  G S +A   QG  P+H+AAQ    E+  + 
Sbjct: 205 PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALL 264

Query: 634 L 634
           L
Sbjct: 265 L 265

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  225 bits (575), Expect = 7e-65
 Identities = 79/303 (26%), Positives = 145/303 (47%), Gaps = 19/303 (6%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
               T  G+TPL +A   G + +   +L   A  +   + G + LH+A  H  L +   L
Sbjct: 139 QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 198

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           L      +S +  G T LH+AA     ++ R L+  +    +  +++  TPLHLAA+ G 
Sbjct: 199 LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLL-QYGGSANAESVQGVTPLHLAAQEGH 257

Query: 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAH 193
            ++  LLL   A+ +  +  G  P+H+ AQ     VA + ++     V ATT+ G T  H
Sbjct: 258 AEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLH 316

Query: 194 IAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD 252
           +A+  G++ +++ L++       ++A+ +    +PL  AA+ GH ++V +L+K GAS  +
Sbjct: 317 VASHYGNIKLVKFLLQ---HQADVNAKTK-LGYSPLHQAAQQGHTDIVTLLLKNGASPNE 372

Query: 253 ENKTGFTAVHLAAQNGHNQVLE--EMRSSKALNVYSK-KLGVTALHVAAYFGQADTVREL 309
            +  G T + +A + G+  V +  ++ + +   V    K  ++            TV E+
Sbjct: 373 VSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPE---------TVDEI 423

Query: 310 LSH 312
           L  
Sbjct: 424 LDV 426

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  111 bits (279), Expect = 7e-26
 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 17/148 (11%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           ++  T +G+TPL +A + G+++LV  +L + A V+   + G S LH AA+ G+  +   L
Sbjct: 304 VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLL 363

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFL--VHDHAAVIDILTLRKQTPLHLAAEA 131
           L + A  N  S  G T L +A   GY  +   L  V D  + + +    + +        
Sbjct: 364 LKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETV--- 420

Query: 132 GQLQVCKLLLDLGASIDATDDQGQKPIH 159
                   +LD+        D+G++ I 
Sbjct: 421 ------DEILDVSE------DEGEELIS 436

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  102 bits (257), Expect = 5e-23
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 7/142 (4%)

Query: 536 HKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQ 595
                      G T LH+A+  G+  + + L+    A  ++  ++ +TPLH+AA AG  +
Sbjct: 3   PGISGGGGGESGLTPLHVASFMGHLPIVKNLL-QRGASPNVSNVKVETPLHMAARAGHTE 61

Query: 596 VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL- 654
           V K LL   A ++A     Q P+H AA+     + ++ L  + +     T        L 
Sbjct: 62  VAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLL-ENNANPNLATTAGHTP--LH 118

Query: 655 IAAGKHCEGMATELLALAAGAD 676
           IAA +         L L   A 
Sbjct: 119 IAAREGHVETV-LAL-LEKEAS 138

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  272 bits (698), Expect = 4e-83
 Identities = 58/403 (14%), Positives = 119/403 (29%), Gaps = 68/403 (16%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
             + +AA  G  + VR L++ G S T +N+ G TA+HLA + G     + + S       
Sbjct: 22  EKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGE-VHS 80

Query: 286 SKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAY 345
               G   +H+A    + D V  L+                       E G  P  L   
Sbjct: 81  LWH-GQKPIHLAVMANKTDLVVALVEG-------------------AKERGQMPESLLNE 120

Query: 346 SGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGG--HVTVVGLLLSRAADLLQSADK 403
                V  +  +             G   LH     G  ++ ++ +L+   A    + DK
Sbjct: 121 CDEREVNEIGSHV--------KHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDK 171

Query: 404 NGKTCLHIAATHGHLQMVEVLL-----GQGAEINATDKGGARSIHTAARYGHVGIINTLL 458
             +T L  A    + + +++++          ++  +K G   +H A       +    +
Sbjct: 172 ADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFV 231

Query: 459 QKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLG 518
           + G  V+                            D      L+++     + + + LL 
Sbjct: 232 EMGIDVN--------------------------MEDNEHTVPLYLSVRAAMVLLTKELLQ 265

Query: 519 QGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILT 578
           +                +   +     V    +  AA     ++ + L  +    +    
Sbjct: 266 KTDVFLIQA----CPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQ-EKLDEVVRSL 320

Query: 579 LRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 621
                      +     V ++ L   A +        +   V+
Sbjct: 321 NTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  261 bits (670), Expect = 4e-79
 Identities = 69/423 (16%), Positives = 131/423 (30%), Gaps = 82/423 (19%)

Query: 41  LNNHARVDV--FDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNG 98
           + +  +++    D E    +H+AA  G       L+        ++R G TALHLA   G
Sbjct: 5   MTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFG 64

Query: 99  YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPI 158
             D  ++L               Q P+HLA  A +  +   L++         ++GQ P 
Sbjct: 65  CVDTAKYLA-SVGE--VHSLWHGQKPIHLAVMANKTDLVVALVEGAK------ERGQMPE 115

Query: 159 HVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISA 218
            +  + +  EV +I               G T  H     G                   
Sbjct: 116 SLLNECDEREVNEI-------GSHVKHCKGQTALHWCVGLGP------------------ 150

Query: 219 RNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQV----LE 274
                            +  ++++LV+ GAS T ++K   T +  A +  + +     ++
Sbjct: 151 ----------------EYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMD 194

Query: 275 EMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGS 333
            + S  +L +    K G + LH A      D     +             G      +  
Sbjct: 195 TVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM-----------GIDV--NMED 241

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQEN-----------GYNPLHLACFGG 382
                PL+L+  +    + + LL    V +      +             + +  A    
Sbjct: 242 NEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPS 301

Query: 383 HVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSI 442
              V+ LL  +  + +  +   G              +  + L   A +    +  ARS 
Sbjct: 302 KQEVLQLLQEKLDE-VVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSS 360

Query: 443 HTA 445
             +
Sbjct: 361 AVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  257 bits (659), Expect = 2e-77
 Identities = 59/453 (13%), Positives = 121/453 (26%), Gaps = 130/453 (28%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
              +H+AA  GQ    + L++ G S    +  G   +H+A +    + A+        + 
Sbjct: 21  MEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLAS-VGEVH 79

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
           +     G                                      P+ LA      ++V 
Sbjct: 80  SL--WHGQK------------------------------------PIHLAVMANKTDLVV 101

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYF 300
            LV+         + G     L  +    +V E       +  + K   G TALH     
Sbjct: 102 ALVEGAK------ERGQMPESLLNECDEREVNE-------IGSHVKHCKGQTALHWCVGL 148

Query: 301 GQA--DTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLN- 357
           G    + ++ L+             GAS       ++  TPL  A    N   + L+++ 
Sbjct: 149 GPEYLEMIKILVQL-----------GASP--TAKDKADETPLMRAMEFRNREALDLMMDT 195

Query: 358 ---SAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT 414
               + +++D    + G + LH A       V    +    D+    D      L+++  
Sbjct: 196 VPSKSSLRLDYAN-KQGNSHLHWAILINWEDVAMRFVEMGIDV-NMEDNEHTVPLYLSVR 253

Query: 415 HGHLQMVEVLLGQGAE-------------INATDKGGARSIHTAARYGHVGIINTLLQKG 461
              + + + LL +                +          +  AA      ++  L +K 
Sbjct: 254 AAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKL 313

Query: 462 EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
           ++V  +                             G              +  + L   A
Sbjct: 314 DEVVRS--------------------------LNTGAGGAVKRKKKAAPAVKRMKLAPSA 347

Query: 522 EINATDKVCDALLTHKAFINSKSRVGRTALHLA 554
            +    +                     +  ++
Sbjct: 348 PVRTRSR-----------------SRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  220 bits (563), Expect = 4e-64
 Identities = 58/390 (14%), Positives = 111/390 (28%), Gaps = 86/390 (22%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
           +  M  +H+AA  G  + VR L+   GV    Q    G   LHLAC  G V     L S 
Sbjct: 18  DENMEKIHVAARKGQTDEVRRLI-ETGVSPTIQN-RFGCTALHLACKFGCVDTAKYLASV 75

Query: 394 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGI 453
                  +  +G+  +H+A       +V  L+    E                      +
Sbjct: 76  GEVH---SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQM------PESLLNECDEREV 126

Query: 454 INTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG--HLQ 511
                    ++                                G+T LH     G  +L+
Sbjct: 127 N--------EIGSHVK------------------------HCKGQTALHWCVGLGPEYLE 154

Query: 512 MVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV---- 567
           M+++L+  GA   A DK                    T L  A      +    ++    
Sbjct: 155 MIKILVQLGASPTAKDKA-----------------DETPLMRAMEFRNREALDLMMDTVP 197

Query: 568 HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFP 627
              +  +D    +  + LH A       V    +++G  ++  D++   P++++ +    
Sbjct: 198 SKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMV 257

Query: 628 EVAQIFLRAHPSLVTATTKEKERAKDL-----------IAAGKHCEGMATELLALAAGA- 675
            + +  L+     +            L            AA    + +  +LL       
Sbjct: 258 LLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVL-QLL-QEKLDE 315

Query: 676 ----DSAGR--ILTATDRRNIEFLDVLIEN 699
                + G    +    +       + +  
Sbjct: 316 VVRSLNTGAGGAVKRKKKAAPAVKRMKLAP 345

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  183 bits (468), Expect = 3e-51
 Identities = 43/300 (14%), Positives = 91/300 (30%), Gaps = 43/300 (14%)

Query: 8   TEISKAL-NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHG- 65
           T++  AL       G  P  +       E+            V   +G++ALH     G 
Sbjct: 97  TDLVVALVEGAKERGQMPESLLNECDEREVNE------IGSHVKHCKGQTALHWCVGLGP 150

Query: 66  -YLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV----HDHAAVIDILTLR 120
            YL++   L+   A   +K +   T L  A      +    ++       +  +D    +
Sbjct: 151 EYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQ 210

Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL--RAHP 178
             + LH A       V    +++G  ++  D++   P++++ +     + +  L      
Sbjct: 211 GNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270

Query: 179 SLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHAN 238
            +      +G T                             +RV     +  AA+     
Sbjct: 271 LIQACPYHNGTTVLP--------------------------DRVVWLDFVPAAADPSKQE 304

Query: 239 VVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA-LNVYSKKLGVTALHVA 297
           V+++L +          TG        +     V     +  A +   S+     +  V+
Sbjct: 305 VLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRS-RARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  177 bits (452), Expect = 3e-49
 Identities = 51/246 (20%), Positives = 84/246 (34%), Gaps = 40/246 (16%)

Query: 400 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ 459
            +D      +H+AA  G    V  L+  G      ++ G  ++H A ++G V     L  
Sbjct: 15  KSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLAS 74

Query: 460 KGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ 519
            GE                                 +G+  +H+A       +V  L+  
Sbjct: 75  VGEVHS----------------------------LWHGQKPIHLAVMANKTDLVVALVEG 106

Query: 520 GAEINATD----KVCDALLTHKAFINSKSRVGRTALHLAAMNG--YADLCRFLVHDHAAV 573
             E           CD    ++   + K   G+TALH     G  Y ++ + LV    A 
Sbjct: 107 AKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILV-QLGAS 165

Query: 574 IDILTLRKQTPLHLAAEAGQLQVCKLLLDL-----GASIDATDDQGQKPIHVAAQNNFPE 628
                   +TPL  A E    +   L++D         +D  + QG   +H A   N+ +
Sbjct: 166 PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWED 225

Query: 629 VAQIFL 634
           VA  F+
Sbjct: 226 VAMRFV 231

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 90.7 bits (226), Expect = 1e-19
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 3/99 (3%)

Query: 536 HKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQ 595
            K             +H+AA  G  D  R L+ +      I      T LHLA + G + 
Sbjct: 9   PKLNRIKSDDENMEKIHVAARKGQTDEVRRLI-ETGVSPTIQNRFGCTALHLACKFGCVD 67

Query: 596 VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
             K L  +G         GQKPIH+A   N  ++    +
Sbjct: 68  TAKYLASVGEVHSLWH--GQKPIHLAVMANKTDLVVALV 104

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  256 bits (656), Expect = 3e-77
 Identities = 93/376 (24%), Positives = 139/376 (36%), Gaps = 58/376 (15%)

Query: 255 KTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELL-SHV 313
           + G +A+ LA  +                V + +     L  AA  G  + +  LL    
Sbjct: 2   EFGKSALDLADPSAKA-------------VLTGEYKKDELLEAARSGNEEKLMALLTPL- 47

Query: 314 PGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYN 373
                       +           TPLHLAA      +V+LLL   G  V A+  + G  
Sbjct: 48  ----------NVNC--HASDGRKSTPLHLAAGYNRVRIVQLLL-QHGADVHAKD-KGGLV 93

Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
           PLH AC  GH  V  LLL   A +  + D    T LH AA+   +++  +LL  GA+   
Sbjct: 94  PLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTL 152

Query: 434 TDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLAC-GHVTVVGLLLSRAADLLQS 492
            +  G  ++  A        +    +       +    A    +  V   L+        
Sbjct: 153 VNCHGKSAVDMAPTPELRERLTYEFKGH-----SLLQAAREADLAKVKKTLALEIINF-K 206

Query: 493 ADKNGKTCLHIAATHGH---LQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRT 549
             ++ +T LH A    H    Q+ E+LL +GA +N  +K                    T
Sbjct: 207 QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKD-----------------FMT 249

Query: 550 ALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA 609
            LH+AA   + D+   L   H A ++ L    QT LH AA AG LQ C+LLL  G+    
Sbjct: 250 PLHVAAERAHNDVMEVLH-KHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSI 308

Query: 610 TDDQGQKPIHVAAQNN 625
              QG     +  +  
Sbjct: 309 ISLQGFTAAQMGNEAV 324

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  255 bits (654), Expect = 6e-77
 Identities = 92/412 (22%), Positives = 154/412 (37%), Gaps = 79/412 (19%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
           + L LA     A +               +     +  AA++G+ + L  + +   +N +
Sbjct: 6   SALDLADPSAKAVL-------------TGEYKKDELLEAARSGNEEKLMALLTPLNVNCH 52

Query: 286 SK-KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAA 344
           +      T LH+AA + +   V+ LL H           GA        + G+ PLH A 
Sbjct: 53  ASDGRKSTPLHLAAGYNRVRIVQLLLQH-----------GADV--HAKDKGGLVPLHNAC 99

Query: 345 YSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKN 404
             G+  V  LLL   G  V+A      + PLH A     V V  LLLS  AD     + +
Sbjct: 100 SYGHYEVTELLL-KHGACVNAMD-LWQFTPLHEAASKNRVEVCSLLLSHGADP-TLVNCH 156

Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
           GK+ + +A T    + +       +            +  AAR   +  +   L      
Sbjct: 157 GKSAVDMAPTPELRERLTYEFKGHS------------LLQAAREADLAKVKKTLALEIIN 204

Query: 465 DVTTNN------LAC-----GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 513
                +       A          V  LLL + A++    +K+  T LH+AA   H  ++
Sbjct: 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV-NEKNKDFMTPLHVAAERAHNDVM 263

Query: 514 EVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV 573
           EVL   GA++NA D +                 G+TALH AA+ G+   CR L+  + + 
Sbjct: 264 EVLHKHGAKMNALDSL-----------------GQTALHRAALAGHLQTCRLLL-SYGSD 305

Query: 574 IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN 625
             I++L+  T   +  E       + +L     +  +D      +  A++  
Sbjct: 306 PSIISLQGFTAAQMGNE-----AVQQILSESTPMRTSDVDY--RLLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  247 bits (634), Expect = 3e-74
 Identities = 87/430 (20%), Positives = 145/430 (33%), Gaps = 84/430 (19%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHG-YLKVCDALLTHKAF 79
           G + L +              +  A+  +  +  +  L  AA  G   K+   L      
Sbjct: 4   GKSALDL-------------ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVN 50

Query: 80  INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
            ++      T LHLAA      + + L+  H A +         PLH A   G  +V +L
Sbjct: 51  CHASDGRKSTPLHLAAGYNRVRIVQLLL-QHGADVHAKDKGGLVPLHNACSYGHYEVTEL 109

Query: 140 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG 199
           LL  GA ++A D     P+H AA  N  EV  + L +H +  T     G +   +A    
Sbjct: 110 LLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL-SHGADPTLVNCHGKSAVDMAPTPE 168

Query: 200 SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFT 259
               +    K                + LQ A E      V+  +        + ++  T
Sbjct: 169 LRERLTYEFKGH--------------SLLQAARE-ADLAKVKKTLALEIINFKQPQSHET 213

Query: 260 AVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKS 319
           A+H A  + H +  +                                  LL         
Sbjct: 214 ALHCAVASLHPKRKQ------------------------------VAELLLRK------- 236

Query: 320 DPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLAC 379
               GA+      ++  MTPLH+AA   + +V+ +L    G +++A     G   LH A 
Sbjct: 237 ----GANV--NEKNKDFMTPLHVAAERAHNDVMEVLH-KHGAKMNALD-SLGQTALHRAA 288

Query: 380 FGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGA 439
             GH+    LLLS  +D        G T   +       + V+ +L +   +  +D    
Sbjct: 289 LAGHLQTCRLLLSYGSD-PSIISLQGFTAAQMGN-----EAVQQILSESTPMRTSDVDYR 342

Query: 440 RSIHTAARYG 449
             +  A++ G
Sbjct: 343 --LLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  242 bits (620), Expect = 3e-72
 Identities = 98/477 (20%), Positives = 154/477 (32%), Gaps = 135/477 (28%)

Query: 87  GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL-QVCKLLLDLGA 145
           G++AL LA              D +A   +    K+  L  AA +G   ++  LL  L  
Sbjct: 4   GKSALDLA--------------DPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNV 49

Query: 146 SIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIE 205
           +  A+D +   P+H+AA  N   + Q+ L  H + V A  K G                 
Sbjct: 50  NCHASDGRKSTPLHLAAGYNRVRIVQLLL-QHGADVHAKDKGGLV--------------- 93

Query: 206 ELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAA 265
                                PL  A   GH  V  +L+K GA     +   FT +H AA
Sbjct: 94  ---------------------PLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAA 132

Query: 266 QNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTG 324
                +V   + S  A +       G +A+ +A      + +                  
Sbjct: 133 SKNRVEVCSLLLSHGA-DPTLVNCHGKSAVDMAPTPELRERLTYEFK------------- 178

Query: 325 ASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGH- 383
                      G + L  AA   +   V+  L    +    Q  ++    LH A    H 
Sbjct: 179 -----------GHSLLQ-AAREADLAKVKKTLALEII-NFKQP-QSHETALHCAVASLHP 224

Query: 384 --VTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARS 441
               V  LLL + A++    +K+  T LH+AA   H  ++EVL   GA++NA D  G  +
Sbjct: 225 KRKQVAELLLRKGANV-NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTA 283

Query: 442 IHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCL 501
           +H AA  GH+     LL  G    +                              G T  
Sbjct: 284 LHRAALAGHLQTCRLLLSYGSDPSII--------------------------SLQGFTAA 317

Query: 502 HIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG 558
            +       + V+ +L +   +  +D                       L  A+  G
Sbjct: 318 QMGN-----EAVQQILSESTPMRTSDV-------------------DYRLLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  241 bits (618), Expect = 7e-72
 Identities = 105/459 (22%), Positives = 154/459 (33%), Gaps = 116/459 (25%)

Query: 54  GRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNG-YADLCRFLVHDHAA 112
           G+SAL L                 A         +  L  AA +G    L   L      
Sbjct: 4   GKSALDL-------------ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLT-PLNV 49

Query: 113 VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI 172
                  RK TPLHLAA   ++++ +LLL  GA + A D  G  P+H A      EV ++
Sbjct: 50  NCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTEL 109

Query: 173 FLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAA 232
            L  H + V A                                          TPL  AA
Sbjct: 110 LL-KHGACVNAMDLWQF------------------------------------TPLHEAA 132

Query: 233 EGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVT 292
                 V  +L+  GA  T  N  G +AV +A      + L                G +
Sbjct: 133 SKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFK-----------GHS 181

Query: 293 ALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNEN-- 350
            L  AA       V++ L+      K               +S  T LH A  S +    
Sbjct: 182 LLQ-AAREADLAKVKKTLALEIINFKQP-------------QSHETALHCAVASLHPKRK 227

Query: 351 -VVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
            V  LLL   G  V+ +  ++   PLH+A    H  V+ +L    A  + + D  G+T L
Sbjct: 228 QVAELLL-RKGANVNEKN-KDFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTAL 284

Query: 410 HIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
           H AA  GHLQ   +LL  G++ +     G     TAA+ G+   +  +L +   +     
Sbjct: 285 HRAALAGHLQTCRLLLSYGSDPSIISLQG----FTAAQMGNE-AVQQILSESTPMR---- 335

Query: 470 NLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG 508
                                 ++D + +  L  A+  G
Sbjct: 336 ----------------------TSDVDYR--LLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  237 bits (606), Expect = 3e-70
 Identities = 81/308 (26%), Positives = 121/308 (39%), Gaps = 36/308 (11%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
           E     L  AA SGNE  +  LL    V   A        PLHLA     V +V LLL  
Sbjct: 22  EYKKDELLEAARSGNEEKLMALLTPLNVNCHASD-GRKSTPLHLAAGYNRVRIVQLLLQH 80

Query: 394 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGI 453
            AD+  + DK G   LH A ++GH ++ E+LL  GA +NA D      +H AA    V +
Sbjct: 81  GADV-HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEV 139

Query: 454 INTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 513
            + LL  G                         AD     + +GK+ + +A T    + +
Sbjct: 140 CSLLLSHG-------------------------ADP-TLVNCHGKSAVDMAPTPELRERL 173

Query: 514 EVLLGQGAEINAT----DKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA---DLCRFL 566
                  + + A            L  +     + +   TALH A  + +     +   L
Sbjct: 174 TYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELL 233

Query: 567 VHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNF 626
           +    A ++       TPLH+AAE     V ++L   GA ++A D  GQ  +H AA    
Sbjct: 234 L-RKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGH 292

Query: 627 PEVAQIFL 634
            +  ++ L
Sbjct: 293 LQTCRLLL 300

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  200 bits (510), Expect = 5e-57
 Identities = 80/405 (19%), Positives = 135/405 (33%), Gaps = 109/405 (26%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           +       TPL +A     + +V  +L + A V   D+ G   LH A  +G+ +V + LL
Sbjct: 52  HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLL 111

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
            H A +N+      T LH AA                                      +
Sbjct: 112 KHGACVNAMDLWQFTPLHEAASKNR----------------------------------V 137

Query: 135 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHI 194
           +VC LLL  GA     +  G+  + +A      E                   G++    
Sbjct: 138 EVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEF------------KGHS-LLQ 184

Query: 195 AAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHAN---VVRVLVKAGASCT 251
           AA +  +  +++ +      +   + + +  T L  A    H     V  +L++ GA+  
Sbjct: 185 AAREADLAKVKKTL--ALEIINFKQPQ-SHETALHCAVASLHPKRKQVAELLLRKGANVN 241

Query: 252 DENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLS 311
           ++NK   T +H+AA+  HN                                 D +  L  
Sbjct: 242 EKNKDFMTPLHVAAERAHN---------------------------------DVMEVLHK 268

Query: 312 HVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENG 371
           H           GA          G T LH AA +G+    RLLL S G      +   G
Sbjct: 269 H-----------GAKM--NALDSLGQTALHRAALAGHLQTCRLLL-SYGSDPSIISL-QG 313

Query: 372 YNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG 416
           +    +         V  +LS +   ++++D + +  L  A+  G
Sbjct: 314 FTAAQMG-----NEAVQQILSESTP-MRTSDVDYR--LLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  179 bits (457), Expect = 5e-50
 Identities = 73/338 (21%), Positives = 118/338 (34%), Gaps = 75/338 (22%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           + +   G  PL  AC+ GH E+   +L + A V+  D    + LH AA    ++VC  LL
Sbjct: 85  HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL 144

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
           +H A     +  G++A+ +A      +   +              +  + L  A E   L
Sbjct: 145 SHGADPTLVNCHGKSAVDMAPTPELRERLTYE------------FKGHSLLQAARE-ADL 191

Query: 135 QVCKLLLDLGASIDATDDQGQKPIHVAAQN---NFPEVAQIFLRAHPSLVTATTKDGNTC 191
              K  L L           +  +H A  +      +VA++ LR   + V    KD    
Sbjct: 192 AKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLR-KGANVNEKNKDFM-- 248

Query: 192 AHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCT 251
                                             TPL +AAE  H +V+ VL K GA   
Sbjct: 249 ----------------------------------TPLHVAAERAHNDVMEVLHKHGAKMN 274

Query: 252 DENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELL 310
             +  G TA+H AA  GH Q    + S  + +       G TA  +       + V+++L
Sbjct: 275 ALDSLGQTALHRAALAGHLQTCRLLLSYGS-DPSIISLQGFTAAQMG-----NEAVQQIL 328

Query: 311 SHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGN 348
           S                   + +      L  A+ +G+
Sbjct: 329 SE-----------ST----PMRTSDVDYRLLEASKAGD 351

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  157 bits (399), Expect = 3e-42
 Identities = 56/256 (21%), Positives = 96/256 (37%), Gaps = 56/256 (21%)

Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGE 462
           + GK+ L              L    A+   T +     +  AAR G+            
Sbjct: 2   EFGKSALD-------------LADPSAKAVLTGEYKKDELLEAARSGN------------ 36

Query: 463 KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAE 522
                          ++ LL     +   ++D    T LH+AA +  +++V++LL  GA+
Sbjct: 37  ------------EEKLMALLTPLNVNC-HASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD 83

Query: 523 INATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ 582
           ++A DK                  G   LH A   G+ ++   L+  H A ++ + L + 
Sbjct: 84  VHAKDKG-----------------GLVPLHNACSYGHYEVTELLL-KHGACVNAMDLWQF 125

Query: 583 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT 642
           TPLH AA   +++VC LLL  GA     +  G+  + +A      E      + H  L  
Sbjct: 126 TPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQA 185

Query: 643 ATTKEKERAKDLIAAG 658
           A   +  + K  +A  
Sbjct: 186 AREADLAKVKKTLALE 201

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  125 bits (317), Expect = 2e-31
 Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 11/156 (7%)

Query: 13  ALNKQTSIGWTPLLIACNRGHM---ELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKV 69
              KQ     T L  A    H    ++   +L   A V+  +++  + LH+AAE  +  V
Sbjct: 203 INFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDV 262

Query: 70  CDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA 129
            + L  H A +N+   +G+TALH AA+ G+   CR L+  + +   I++L+  T   +  
Sbjct: 263 MEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLL-SYGSDPSIISLQGFTAAQMGN 321

Query: 130 EAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN 165
           E       + +L     +  +D      +  A++  
Sbjct: 322 E-----AVQQILSESTPMRTSDVDY--RLLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 93.7 bits (234), Expect = 1e-20
 Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 8/146 (5%)

Query: 533 LLTHKAFINSKSRVGRTALHLAAMNG-YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEA 591
           L    A         +  L  AA +G    L   L             RK TPLHLAA  
Sbjct: 10  LADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLT-PLNVNCHASDGRKSTPLHLAAGY 68

Query: 592 GQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERA 651
            ++++ +LLL  GA + A D  G  P+H A      EV ++ L  H + V A    +   
Sbjct: 69  NRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLL-KHGACVNAMDLWQFTP 127

Query: 652 KDL-IAAGKHCEGMATELLALAAGAD 676
             L  AA K+   +   LL L+ GAD
Sbjct: 128 --LHEAASKNRVEVC-SLL-LSHGAD 149

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  244 bits (624), Expect = 2e-72
 Identities = 70/392 (17%), Positives = 130/392 (33%), Gaps = 68/392 (17%)

Query: 253 ENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSH 312
              +   ++  A+ +G+ +                   +         G         ++
Sbjct: 33  SITSSQHSLLEASYDGYIKRQRNELQHY---------SLYPNPQGYGNGNDFLGDFNHTN 83

Query: 313 VPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGY 372
           +    + +                   LH  A  G+  +   +     V +      +  
Sbjct: 84  LQIPTEPE-------------PESPIKLHTEAA-GSYAITEPIT-RESVNIIDP--RHNR 126

Query: 373 NPLHLACFGGHVTVVGLLLSRAADLLQSA-------DKNGKTCLHIAATHGHLQMVEVLL 425
             LH             L+   A    +A       D +  T L +A      ++V  L+
Sbjct: 127 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLM 186

Query: 426 GQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSR 485
             GA+    +K    ++H AA     G++  +L   +                       
Sbjct: 187 KAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTK----------------------L 224

Query: 486 AADLLQSADKNGKTCLHIAATHGHLQMVEV---LLGQGAEINATDKVCDALLTHKAFINS 542
             D+ +  D+NG T L I A +     V     L+ +GA+++             A  +S
Sbjct: 225 KGDI-EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA---------ARKDS 274

Query: 543 KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 602
           +   GRTALH AA      + ++LV +  +  D      +TP+ LAA+ G+++V   L+ 
Sbjct: 275 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ 334

Query: 603 LGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
            GAS++A D        +A  NN   +  IF 
Sbjct: 335 QGASVEAVDATDHTARQLAQANNHHNIVDIFD 366

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  237 bits (607), Expect = 4e-70
 Identities = 65/401 (16%), Positives = 122/401 (30%), Gaps = 84/401 (20%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
             L  A+  G+    R                         NG++ + +   ++  +   
Sbjct: 39  HSLLEASYDGYIKRQRNE---------LQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTE 89

Query: 286 SKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAY 345
            +      LH  A  G       +                +    +      T LH  A 
Sbjct: 90  PEPESPIKLHTEAA-GSYAITEPITRE-----------SVN---IIDPRHNRTVLHWIAS 134

Query: 346 SGNENVVRLLLN-------SAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLL 398
           + +      L+        +AG  V+A    +   PL LA       +V  L+   AD  
Sbjct: 135 NSSAEKSEDLIVHEAKECIAAGADVNAMD-CDENTPLMLAVLARRRRLVAYLMKAGADP- 192

Query: 399 QSADKNGKTCLHIAATHGHLQMVEVLLGQ---GAEINATDKGGARSIHTAARYGHVGIIN 455
              +K+ ++ LH AA +    M+  +L       +I   D+ G  ++   A         
Sbjct: 193 TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEG----- 247

Query: 456 TLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADL-------LQSADKNGKTCLHIAATHG 508
                               V    LL+ + A +         S    G+T LH AA   
Sbjct: 248 -----------------RDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVS 290

Query: 509 HLQMVEVLLGQ-GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 567
           ++ +V+ L+G+ G+  +  D+                  G+T + LAA  G  ++  +L+
Sbjct: 291 NMPIVKYLVGEKGSNKDKQDED-----------------GKTPIMLAAQEGRIEVVMYLI 333

Query: 568 HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID 608
               A ++ +     T   LA       +  +        +
Sbjct: 334 -QQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  228 bits (583), Expect = 6e-67
 Identities = 66/438 (15%), Positives = 126/438 (28%), Gaps = 97/438 (22%)

Query: 5   MSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEH 64
           M   E ++  ++  +     LL A   G+++            +               +
Sbjct: 21  MENEEKNRKNHQSITSSQHSLLEASYDGYIKRQ---------RNELQHYSLYPNPQGYGN 71

Query: 65  GYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTP 124
           G   + D   T+              LH  A  G   +   +  +   +ID      +T 
Sbjct: 72  GNDFLGDFNHTNLQIPTEPEPESPIKLHTEA-AGSYAITEPITRESVNIID--PRHNRTV 128

Query: 125 LHLAAEAGQLQVCKLLL--------DLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176
           LH  A     +  + L+          GA ++A D     P+ +A       +    +  
Sbjct: 129 LHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLM-K 187

Query: 177 HPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGH 236
             +  T   K                                       + L  AA    
Sbjct: 188 AGADPTIYNKSER------------------------------------SALHQAAANRD 211

Query: 237 ANVVRVLV---KAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTA 293
             ++  ++   K      + ++ G TA+ + A N     +                    
Sbjct: 212 FGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVA------------------- 252

Query: 294 LHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVR 353
                      + + L+        +      +   +     G T LH AA   N  +V+
Sbjct: 253 -----------SAKLLVEK-----GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVK 296

Query: 354 LLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAA 413
            L+   G   D Q  E+G  P+ LA   G + VV  L+ + A  +++ D    T   +A 
Sbjct: 297 YLVGEKGSNKDKQD-EDGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQ 354

Query: 414 THGHLQMVEVLLGQGAEI 431
            + H  +V++      E 
Sbjct: 355 ANNHHNIVDIFDRCRPER 372

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  224 bits (572), Expect = 3e-65
 Identities = 82/451 (18%), Positives = 145/451 (32%), Gaps = 101/451 (22%)

Query: 22  WTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFIN 81
           W P +    +      +  + +           + +L  A+  GY+K            N
Sbjct: 17  WMPPMENEEKNRKN--HQSITS----------SQHSLLEASYDGYIKR---------QRN 55

Query: 82  SKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 141
                          NG   L  F    +  +           LH  A  G   + + + 
Sbjct: 56  ELQHYSLYPNPQGYGNGNDFLGDFNHT-NLQIPTEPEPESPIKLHTEAA-GSYAITEPIT 113

Query: 142 DLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSV 201
               +I       +  +H  A N+  E ++  +                  H A    + 
Sbjct: 114 RESVNIIDPRH-NRTVLHWIASNSSAEKSEDLI-----------------VHEAKECIAA 155

Query: 202 GV-IEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTA 260
           G  +  +   +              TPL LA       +V  L+KAGA  T  NK+  +A
Sbjct: 156 GADVNAMDCDEN-------------TPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA 202

Query: 261 VHLAAQNGHNQVLEEMRSSKAL--NVYSK-KLGVTALHVAAYFGQAD---TVRELLSHVP 314
           +H AA N    ++  M +S  L  ++    + G+TAL + A+    D   + + L+    
Sbjct: 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEK-- 260

Query: 315 GTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNP 374
               +      +   +     G T LH AA   N  +V+ L+   G   D Q        
Sbjct: 261 ---GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQ-------- 309

Query: 375 LHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT 434
                                      D++GKT + +AA  G +++V  L+ QGA + A 
Sbjct: 310 ---------------------------DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAV 342

Query: 435 DKGGARSIHTAARYGHVGIINTLLQKGEKVD 465
           D     +   A    H  I++   +   + +
Sbjct: 343 DATDHTARQLAQANNHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  223 bits (570), Expect = 4e-65
 Identities = 61/403 (15%), Positives = 127/403 (31%), Gaps = 76/403 (18%)

Query: 142 DLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSV 201
           +       +    Q  +  A+ + + +  +  L                        G+ 
Sbjct: 25  EKNRKNHQSITSSQHSLLEASYDGYIKRQRNEL----------QHYSLYPNPQGYGNGND 74

Query: 202 GVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAV 261
            + +         + +     +    L   A G    +   + +   +   + +   T +
Sbjct: 75  FLGDFNHTNL--QIPTEPEPESP-IKLHTEAAG-SYAITEPITRESVNI-IDPRHNRTVL 129

Query: 262 HLAAQNGHNQVLEEMRSSKALNVYSK--------KLGVTALHVAAYFGQADTVRELLSHV 313
           H  A N   +  E++   +A    +             T L +A    +   V  L+   
Sbjct: 130 HWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKA- 188

Query: 314 PGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLN--SAGVQVDAQTQENG 371
                     GA     + ++S  + LH AA + +  ++  +LN       ++     NG
Sbjct: 189 ----------GADP--TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELD-RNG 235

Query: 372 YNPLHLACFGGH---VTVVGLLLSRAADL-------LQSADKNGKTCLHIAATHGHLQMV 421
              L +         V    LL+ + A +         S    G+T LH AA   ++ +V
Sbjct: 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIV 295

Query: 422 EVLLGQ-GAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVG 480
           + L+G+ G+  +  D+ G   I  AA+ G + ++  L+Q+G  V+               
Sbjct: 296 KYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAV------------- 342

Query: 481 LLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEI 523
                        D    T   +A  + H  +V++      E 
Sbjct: 343 -------------DATDHTARQLAQANNHHNIVDIFDRCRPER 372

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  190 bits (486), Expect = 1e-53
 Identities = 54/317 (17%), Positives = 96/317 (30%), Gaps = 62/317 (19%)

Query: 331 LGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLL 390
               S    L  A+Y G     R  L                 P       G+  +    
Sbjct: 32  QSITSSQHSLLEASYDGYIKRQRNELQ-----------HYSLYPNPQGYGNGNDFLGDFN 80

Query: 391 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGH 450
            +         +      LH  A  G   + E +  +   I    +     +H  A    
Sbjct: 81  HTNLQI-PTEPEPESPIKLHTEA-AGSYAITEPITRESVNIID-PRHNRTVLHWIASNSS 137

Query: 451 VGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL 510
                 L+    K                   ++  AD + + D +  T L +A      
Sbjct: 138 AEKSEDLIVHEAK-----------------ECIAAGAD-VNAMDCDENTPLMLAVLARRR 179

Query: 511 QMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH 570
           ++V  L+  GA+    +K                   R+ALH AA N    +  ++++  
Sbjct: 180 RLVAYLMKAGADPTIYNK-----------------SERSALHQAAANRDFGMMVYMLNST 222

Query: 571 A--AVIDILTLRKQTPLHLAAEAG---QLQVCKLLLDLGASI--------DATDDQGQKP 617
                I+ L     T L + A      Q+   KLL++ GA +        D+   +G+  
Sbjct: 223 KLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTA 282

Query: 618 IHVAAQNNFPEVAQIFL 634
           +H AAQ +   + +  +
Sbjct: 283 LHYAAQVSNMPIVKYLV 299

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  135 bits (341), Expect = 2e-34
 Identities = 40/286 (13%), Positives = 77/286 (26%), Gaps = 65/286 (22%)

Query: 401 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQK 460
           +  + +  L  A+  G+++            N                G+  + +     
Sbjct: 33  SITSSQHSLLEASYDGYIKRQR---------NELQHYSLYPNPQGYGNGNDFLGDFNHTN 83

Query: 461 GEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 520
            +                               +      LH  A  G   + E +  + 
Sbjct: 84  LQIPT--------------------------EPEPESPIKLHTEA-AGSYAITEPITRES 116

Query: 521 AEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHA-------AV 573
             I                        RT LH  A N  A+    L+   A       A 
Sbjct: 117 VNIIDPRH------------------NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD 158

Query: 574 IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
           ++ +   + TPL LA  A + ++   L+  GA     +   +  +H AA N    +    
Sbjct: 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYM 218

Query: 634 LRAHPSLVTATTKEKERAKDLIAA---GKHCEGMATELLALAAGAD 676
           L +          ++     L+         +  + +LL +  GA 
Sbjct: 219 LNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLL-VEKGAK 263

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 63.4 bits (155), Expect = 1e-10
 Identities = 10/113 (8%), Positives = 28/113 (24%), Gaps = 19/113 (16%)

Query: 522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK 581
            +   +K            +      + +L  A+ +GY    R  +  ++          
Sbjct: 20  PMENEEK--------NRKNHQSITSSQHSLLEASYDGYIKRQRNELQHYS---------- 61

Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
             P       G   +              + +    +H  A  ++  + +   
Sbjct: 62  LYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSY-AITEPIT 113

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  234 bits (600), Expect = 2e-70
 Identities = 62/301 (20%), Positives = 93/301 (30%), Gaps = 35/301 (11%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAG---VQVDAQTQENGYNPLHLACFGGHVTVVGLL 390
           E G T LHLA    +E  +  LL         +D Q  + G   LHLA   G  + V  L
Sbjct: 7   EDGDTALHLAVIHQHEPFLDFLL-GFSAGHEYLDLQN-DLGQTALHLAAILGEASTVEKL 64

Query: 391 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGH 450
            +  A +   A++ G T LH+A          VLL                  +      
Sbjct: 65  YAAGAGV-LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDT-YLTQSQDCTPD 122

Query: 451 VGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL 510
                  +                              L ++ + +G T LH+A  H   
Sbjct: 123 TSHAPAAVDSQPN----------PENEEEPRDEDWRLQL-EAENYDGHTPLHVAVIHKDA 171

Query: 511 QMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH 570
           +MV +L   GA++N  +                   GRT LHLA     A +   L+   
Sbjct: 172 EMVRLLRDAGADLNKPEP----------------TCGRTPLHLAVEAQAASVLELLL-KA 214

Query: 571 AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA 630
            A         +TPL  A       + +LL   GA           P   +  ++  +  
Sbjct: 215 GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNR 274

Query: 631 Q 631
            
Sbjct: 275 D 275

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  218 bits (557), Expect = 2e-64
 Identities = 65/304 (21%), Positives = 107/304 (35%), Gaps = 34/304 (11%)

Query: 220 NRVTE--ATPLQLAAEGGHANVVRVLVKAGASCTD---ENKTGFTAVHLAAQNGHNQVLE 274
             VTE   T L LA    H   +  L+   A       +N  G TA+HLAA  G    +E
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVE 62

Query: 275 EMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGS 333
           ++ ++ A  V    + G TALH+A           LL   P   +    T  +   +   
Sbjct: 63  KLYAAGA-GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
           ++   P  + +    EN          +Q++A+   +G+ PLH+A       +V LL   
Sbjct: 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAEN-YDGHTPLHVAVIHKDAEMVRLLRDA 180

Query: 394 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGI 453
            ADL +     G+T LH+A       ++E+LL  GA+  A   GG   + +A    +  +
Sbjct: 181 GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPIL 240

Query: 454 INTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 513
              L   G                         A        +  +    + +       
Sbjct: 241 ARLLRAHG-------------------------AP-EPEDGGDKLSPCSSSGSDSDSDNR 274

Query: 514 EVLL 517
           +   
Sbjct: 275 DEGD 278

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  209 bits (534), Expect = 3e-61
 Identities = 66/327 (20%), Positives = 97/327 (29%), Gaps = 70/327 (21%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLG-ELGSESGMTPLHLAAYSGN 348
           G TALH+A        +  LL              A     +L ++ G T LHLAA  G 
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGF-----------SAGHEYLDLQNDLGQTALHLAAILGE 57

Query: 349 ENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAAD---------LLQ 399
            + V  L  +AG  V       G+  LHLAC     T   +LL              L Q
Sbjct: 58  ASTVEKLY-AAGAGVLVAE-RGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQ 115

Query: 400 SADKNGKTC----LHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIIN 455
           S D    T        +  +   +          ++ A +  G   +H A  +    ++ 
Sbjct: 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVR 175

Query: 456 TLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEV 515
            L   G  ++                               G+T LH+A       ++E+
Sbjct: 176 LLRDAGADLNKPEPT-------------------------CGRTPLHLAVEAQAASVLEL 210

Query: 516 LLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVID 575
           LL  GA+  A                     GRT L  A +     L R L   H A   
Sbjct: 211 LLKAGADPTARMY-----------------GGRTPLGSALLRPNPILARLLR-AHGAPEP 252

Query: 576 ILTLRKQTPLHLAAEAGQLQVCKLLLD 602
                K +P   +             +
Sbjct: 253 EDGGDKLSPCSSSGSDSDSDNRDEGDE 279

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  207 bits (528), Expect = 2e-60
 Identities = 60/295 (20%), Positives = 100/295 (33%), Gaps = 31/295 (10%)

Query: 183 ATTKDGNTCAHIAAMQGSVGVIEELMKFD-RSGVISARNRVTEATPLQLAAEGGHANVVR 241
             T+DG+T  H+A +      ++ L+ F      +  +N     T L LAA  G A+ V 
Sbjct: 4   YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQND-LGQTALHLAAILGEASTVE 62

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLE--------------EMRSSKALNVYSK 287
            L  AGA      + G TA+HLA +   +                  +   +++ +    
Sbjct: 63  KLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122

Query: 288 KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSG 347
                A   +    + +                         E  +  G TPLH+A    
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDEDW-----------RLQL--EAENYDGHTPLHVAVIHK 169

Query: 348 NENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKT 407
           +  +VRLL   AG  ++      G  PLHLA      +V+ LLL   AD   +    G+T
Sbjct: 170 DAEMVRLLR-DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP-TARMYGGRT 227

Query: 408 CLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGE 462
            L  A    +  +  +L   GA              ++         +   +  +
Sbjct: 228 PLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDEYDD 282

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  198 bits (506), Expect = 2e-57
 Identities = 63/270 (23%), Positives = 99/270 (36%), Gaps = 35/270 (12%)

Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAADLLQ--SADKNGKTCLHIAATHGHLQMVEVLLG 426
           E+G   LHLA    H   +  LL  +A        +  G+T LH+AA  G    VE L  
Sbjct: 7   EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA 66

Query: 427 QGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRA 486
            GA +   ++GG  ++H A R         LLQ         ++            L+++
Sbjct: 67  AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDT----------YLTQS 116

Query: 487 ADLLQSADKNGKTCLHIAATH-GHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSR 545
            D              + +      +          ++ A +                  
Sbjct: 117 QDC---TPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD---------------- 157

Query: 546 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK-QTPLHLAAEAGQLQVCKLLLDLG 604
            G T LH+A ++  A++ R L  D  A ++       +TPLHLA EA    V +LLL  G
Sbjct: 158 -GHTPLHVAVIHKDAEMVRLLR-DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG 215

Query: 605 ASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           A   A    G+ P+  A     P +A++  
Sbjct: 216 ADPTARMYGGRTPLGSALLRPNPILARLLR 245

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  185 bits (472), Expect = 9e-53
 Identities = 60/279 (21%), Positives = 102/279 (36%), Gaps = 21/279 (7%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLN---NHARVDVFDQEGRSALHLAAEHGYLKVC 70
               T  G T L +A    H   ++ +L     H  +D+ +  G++ALHLAA  G     
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

Query: 71  DALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV------------IDILT 118
           + L    A +    R G TALHLA           L+    +              D   
Sbjct: 62  EKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121

Query: 119 LRKQTPLHLAAEA-GQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 177
                P  + ++   + +      D    ++A +  G  P+HVA  +   E+ ++   A 
Sbjct: 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG 181

Query: 178 PSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGH 236
             L       G T  H+A    +  V+E L+K   +G   +AR      TPL  A    +
Sbjct: 182 ADLNKPEPTCGRTPLHLAVEAQAASVLELLLK---AGADPTARMY-GGRTPLGSALLRPN 237

Query: 237 ANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEE 275
             + R+L   GA   ++     +    +  +  +   +E
Sbjct: 238 PILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDE 276

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  148 bits (377), Expect = 4e-40
 Identities = 44/212 (20%), Positives = 74/212 (34%), Gaps = 17/212 (8%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRS--------------ALHL 60
                 G T L +AC          +L           +                 A   
Sbjct: 72  LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVD 131

Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
           +  +   +        +  + +++  G T LH+A ++  A++ R L  D  A ++     
Sbjct: 132 SQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR-DAGADLNKPEPT 190

Query: 121 K-QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179
             +TPLHLA EA    V +LLL  GA   A    G+ P+  A     P +A+  LRAH +
Sbjct: 191 CGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILAR-LLRAHGA 249

Query: 180 LVTATTKDGNTCAHIAAMQGSVGVIEELMKFD 211
                  D  +    +         +E  ++D
Sbjct: 250 PEPEDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  125 bits (317), Expect = 5e-32
 Identities = 48/259 (18%), Positives = 79/259 (30%), Gaps = 56/259 (21%)

Query: 431 INATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLL 490
                + G  ++H A  + H   ++ LL           +                    
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFS--AGHEYLD-------------------- 39

Query: 491 QSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTA 550
              +  G+T LH+AA  G    VE L   GA +   ++                  G TA
Sbjct: 40  -LQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER-----------------GGHTA 81

Query: 551 LHLAAMNGYADLCRFLVHDHAAV------------IDILTLRKQTPLHLAAEA-GQLQVC 597
           LHLA           L+    +              D        P  + ++   + +  
Sbjct: 82  LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEE 141

Query: 598 KLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAA 657
               D    ++A +  G  P+HVA  +   E+ +  LR   + +        R    +A 
Sbjct: 142 PRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVR-LLRDAGADLNKPEPTCGRTPLHLAV 200

Query: 658 GKHCEGMATELLALAAGAD 676
                 +  ELL L AGAD
Sbjct: 201 EAQAASVL-ELL-LKAGAD 217

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  230 bits (588), Expect = 1e-68
 Identities = 68/386 (17%), Positives = 116/386 (30%), Gaps = 108/386 (27%)

Query: 230 LAAEGGHANVVRVLVKAGAS--CTDENKT---GFTAVHLAAQNGHNQVLEEMRSSKALNV 284
           + +   H +    LV  G+     D  +    G          G   +      S  L  
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLL------SNPLMG 54

Query: 285 YSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAA 344
            +     + +H AA  G   ++R L+S            G +    + +   ++PLH A 
Sbjct: 55  DAVS-DWSPMHEAAIHGHQLSLRNLISQ-----------GWAV--NIITADHVSPLHEAC 100

Query: 345 YSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKN 404
             G+ + V++LL   G QV+  T  + + PL  AC  G    V LLL   A +    + +
Sbjct: 101 LGGHLSCVKILL-KHGAQVNGVT-ADWHTPLFNACVSGSWDCVNLLLQHGASV--QPESD 156

Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
             + +H AA  GH++ V  L+  G  I+         ++ A        +  LL+ G  V
Sbjct: 157 LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV 216

Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
           +                             K   + LH        ++  +L+  GA+  
Sbjct: 217 N---------------------------QGKGQDSPLHAVVRTASEELACLLMDFGADTQ 249

Query: 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTP 584
           A +                   G+  + L                               
Sbjct: 250 AKNAE-----------------GKRPVELVPPES-------------------------- 266

Query: 585 LHLAAEAGQLQVCKLLLDLGASIDAT 610
             LA           L   GAS+   
Sbjct: 267 -PLAQL--------FLEREGASLPKP 283

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  214 bits (548), Expect = 5e-63
 Identities = 67/339 (19%), Positives = 109/339 (32%), Gaps = 64/339 (18%)

Query: 342 LAAYSGNENVVRLLLNSAGVQVDA----QTQENGYNPLHLACFGGHVTVVGLLLSRAADL 397
           + +   + +    L+   G  + +    Q   +G  P     F G       LLS     
Sbjct: 1   MGSSHHHHHHSSGLV-PRGSHMASMDGKQGGMDGSKPAGPRDFPGI-----RLLSNPLM- 53

Query: 398 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTL 457
                 +  + +H AA HGH   +  L+ QG  +N         +H A   GH+  +  L
Sbjct: 54  --GDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKIL 111

Query: 458 LQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 517
           L+ G +V+                              +  T L  A   G    V +LL
Sbjct: 112 LKHGAQVNG--------------------------VTADWHTPLFNACVSGSWDCVNLLL 145

Query: 518 GQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 577
             GA +                         + +H AA  G+ +    L+  +   ID  
Sbjct: 146 QHGASVQPESD------------------LASPIHEAARRGHVECVNSLI-AYGGNIDHK 186

Query: 578 TLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 637
                TPL+LA E  Q    K LL+ GA ++        P+H   +    E+A + +   
Sbjct: 187 ISHLGTPLYLACENQQRACVKKLLESGADVNQGKG-QDSPLHAVVRTASEELACLLM-DF 244

Query: 638 PSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGAD 676
            +   A   E +R   +         +A   L    GA 
Sbjct: 245 GADTQAKNAEGKRP--VELVPPESP-LAQLFL-EREGAS 279

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  207 bits (529), Expect = 2e-60
 Identities = 59/308 (19%), Positives = 112/308 (36%), Gaps = 25/308 (8%)

Query: 127 LAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTK 186
           + +          L+  G+ + + D   Q  +  +      +   I L ++P  +     
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDG-KQGGMDGSKPAGPRDFPGIRLLSNP--LMGDAV 57

Query: 187 DGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKA 246
              +  H AA+ G    +  L+   +   ++        +PL  A  GGH + V++L+K 
Sbjct: 58  SDWSPMHEAAIHGHQLSLRNLI--SQGWAVNIITA-DHVSPLHEACLGGHLSCVKILLKH 114

Query: 247 GASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTV 306
           GA          T +  A  +G    +  +    A +V  +    + +H AA  G  + V
Sbjct: 115 GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA-SVQPESDLASPIHEAARRGHVECV 173

Query: 307 RELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQ 366
             L+++           G +   +       TPL+LA  +     V+ LL  +G  V+  
Sbjct: 174 NSLIAY-----------GGNI--DHKISHLGTPLYLACENQQRACVKKLL-ESGADVNQG 219

Query: 367 TQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLG 426
             +   +PLH         +  LL+   AD  Q+ +  GK  + +      L     L  
Sbjct: 220 --KGQDSPLHAVVRTASEELACLLMDFGADT-QAKNAEGKRPVELVPPESPL-AQLFLER 275

Query: 427 QGAEINAT 434
           +GA +   
Sbjct: 276 EGASLPKP 283

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  195 bits (498), Expect = 3e-56
 Identities = 56/307 (18%), Positives = 107/307 (34%), Gaps = 26/307 (8%)

Query: 60  LAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTL 119
           + + H +      L+   + + S     +  +  +   G  D     +  +  + D   +
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMD-GKQGGMDGSKPAGPRDFPGIRLLSNPLMGD--AV 57

Query: 120 RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179
              +P+H AA  G     + L+  G +++        P+H A         +I L  H +
Sbjct: 58  SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILL-KHGA 116

Query: 180 LVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHAN 238
            V   T D +T    A + GS   +  L++    G  +   +    A+P+  AA  GH  
Sbjct: 117 QVNGVTADWHTPLFNACVSGSWDCVNLLLQ---HGASVQPESD--LASPIHEAARRGHVE 171

Query: 239 VVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAA 298
            V  L+  G +   +     T ++LA +N     ++++  S A +V   K   + LH   
Sbjct: 172 CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGA-DVNQGKGQDSPLHAVV 230

Query: 299 YFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNS 358
                +    L+             GA    +  +  G  P+ L          +L L  
Sbjct: 231 RTASEELACLLMDF-----------GADT--QAKNAEGKRPVELVPPESPL--AQLFLER 275

Query: 359 AGVQVDA 365
            G  +  
Sbjct: 276 EGASLPK 282

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  185 bits (472), Expect = 9e-53
 Identities = 55/270 (20%), Positives = 95/270 (35%), Gaps = 27/270 (10%)

Query: 7   GTEISKALNKQTSI-GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHG 65
           G+ ++    KQ  + G  P       G   L N ++ +            S +H AA HG
Sbjct: 18  GSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGD-------AVSDWSPMHEAAIHG 70

Query: 66  YLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 125
           +      L++    +N  +    + LH A + G+    + L+  H A ++ +T    TPL
Sbjct: 71  HQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPL 129

Query: 126 HLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATT 185
             A  +G      LLL  GAS+    D    PIH AA+    E     + A+   +    
Sbjct: 130 FNACVSGSWDCVNLLLQHGASVQPESD-LASPIHEAARRGHVECVNSLI-AYGGNIDHKI 187

Query: 186 KDGNTCAHIAAMQGSVGVIEELMKF------DRSGVISARNRVTEATPLQLAAEGGHANV 239
               T  ++A        +++L++        +             +PL          +
Sbjct: 188 SHLGTPLYLACENQQRACVKKLLESGADVNQGKGQ----------DSPLHAVVRTASEEL 237

Query: 240 VRVLVKAGASCTDENKTGFTAVHLAAQNGH 269
             +L+  GA    +N  G   V L      
Sbjct: 238 ACLLMDFGADTQAKNAEGKRPVELVPPESP 267

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  229 bits (586), Expect = 2e-68
 Identities = 78/299 (26%), Positives = 122/299 (40%), Gaps = 43/299 (14%)

Query: 336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAA 395
               L  A  + + ++V+ LL   G  V+ Q +E G+ PLH A       +V LLL   A
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 396 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIIN 455
           D      KNG T   +AA  G ++++++ L +GA++N  D  G  +   AA YG V  + 
Sbjct: 64  DP-VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALK 122

Query: 456 TLLQKGEKVDVTTNNLA------------------CGHVTVVGLLLSRA-ADLLQSADKN 496
            L ++G  V++                         GHV V+ +LL    AD+  + D  
Sbjct: 123 FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNM 181

Query: 497 GKTCLHIAATHGH----LQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALH 552
           G+  L  A           +  +LL  GA++N   +                  G+T L 
Sbjct: 182 GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER-----------------GKTPLI 224

Query: 553 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD 611
           LA    +  L + L+      I+      +T L LA E    ++ +LL   GAS D  D
Sbjct: 225 LAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  208 bits (531), Expect = 9e-61
 Identities = 70/321 (21%), Positives = 120/321 (37%), Gaps = 59/321 (18%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDE-NKTGFTAVHLAAQNGHNQVLEEMRSSKALNV 284
             L  A +    ++V+ L++ GA+   +  + G+T +H A Q     ++E +    A + 
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA-DP 65

Query: 285 YSK-KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLA 343
             + K G T   +AA  G    ++  LS            GA          G T    A
Sbjct: 66  VLRKKNGATPFLLAAIAGSVKLLKLFLSK-----------GADV--NECDFYGFTAFMEA 112

Query: 344 AYSGNENVVRLLLNSAGVQVDAQ---------TQENGYNPLHLACFGGHVTVVGLLLSRA 394
           A  G    ++ L    G  V+ +          ++ G   L  A   GHV V+ +LL   
Sbjct: 113 AVYGKVKALKFLY-KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM 171

Query: 395 -ADLLQSADKNGKTCLHIAATHGH----LQMVEVLLGQGAEINATDKGGARSIHTAARYG 449
            AD+  + D  G+  L  A           +  +LL  GA++N   + G   +  A    
Sbjct: 172 GADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK 230

Query: 450 HVGIINTLL-QKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG 508
           H+G++  LL Q+  +++                            D +GKT L +A    
Sbjct: 231 HLGLVQRLLEQEHIEIN--------------------------DTDSDGKTALLLAVELK 264

Query: 509 HLQMVEVLLGQGAEINATDKV 529
             ++ E+L  +GA  +  D V
Sbjct: 265 LKKIAELLCKRGASTDCGDLV 285

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  207 bits (529), Expect = 2e-60
 Identities = 73/312 (23%), Positives = 119/312 (38%), Gaps = 42/312 (13%)

Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 429
              + L  A     V +V  LL   A++    ++ G T LH A       +VE+LL  GA
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 430 EINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADL 489
           +     K GA     AA  G V ++   L KG  V+                        
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNE----------------------- 100

Query: 490 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRT 549
               D  G T    AA +G ++ ++ L  +GA +N   K        K       + G T
Sbjct: 101 ---CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK-------TKEDQERLRKGGAT 150

Query: 550 ALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ----LQVCKLLLDLGA 605
           AL  AA  G+ ++ + L+ +  A ++      +  L  A  +        +  LLLD GA
Sbjct: 151 ALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGA 210

Query: 606 SIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL-IAAGKHCEGM 664
            ++   ++G+ P+ +A +     + Q  L      +  T  + + A  L +A     + +
Sbjct: 211 DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTA--LLLAVELKLKKI 268

Query: 665 ATELLALAAGAD 676
           A ELL    GA 
Sbjct: 269 A-ELL-CKRGAS 278

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  198 bits (506), Expect = 3e-57
 Identities = 77/387 (19%), Positives = 122/387 (31%), Gaps = 107/387 (27%)

Query: 51  DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSR-VGRTALHLAAMNGYADLCRFLVHD 109
             E    L  A ++  + +   LL   A +N +    G T LH A      D+   L+  
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL-R 60

Query: 110 HAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEV 169
           H A   +      TP  LAA AG +++ KL L  GA ++  D  G      AA     + 
Sbjct: 61  HGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120

Query: 170 AQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQ 229
            +                              G    +    ++     R R   AT L 
Sbjct: 121 LKFLY-------------------------KRGA--NVNLRRKTKEDQERLRKGGATALM 153

Query: 230 LAAEGGHANVVRVLV-KAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKK 288
            AAE GH  V+++L+ + GA     +  G  A+  A  +  +  +E +            
Sbjct: 154 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAI------------ 201

Query: 289 LGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGN 348
                               LL H           GA     +  E G TPL LA    +
Sbjct: 202 -----------------THLLLDH-----------GADV--NVRGERGKTPLILAVEKKH 231

Query: 349 ENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTC 408
             +V+ LL    ++++                                     D +GKT 
Sbjct: 232 LGLVQRLLEQEHIEINDT-----------------------------------DSDGKTA 256

Query: 409 LHIAATHGHLQMVEVLLGQGAEINATD 435
           L +A      ++ E+L  +GA  +  D
Sbjct: 257 LLLAVELKLKKIAELLCKRGASTDCGD 283

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  186 bits (474), Expect = 4e-53
 Identities = 58/304 (19%), Positives = 102/304 (33%), Gaps = 45/304 (14%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQE-GRSALHLAAEHGYLKVCDALLTHKAF 79
               L+ A     ++LV  +L   A V+  ++E G + LH A +     + + LL H A 
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64

Query: 80  INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
              + + G T   LAA+ G   L +  +    A ++       T    AA  G+++  K 
Sbjct: 65  PVLRKKNGATPFLLAAIAGSVKLLKLFL-SKGADVNECDFYGFTAFMEAAVYGKVKALKF 123

Query: 140 LLDLGASIDATD----------DQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGN 189
           L   GA+++               G   +  AA+    EV +I L    + V A    G 
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183

Query: 190 TCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGAS 249
                A +      +E                                 +  +L+  GA 
Sbjct: 184 NALIHALLSSDDSDVEA--------------------------------ITHLLLDHGAD 211

Query: 250 CTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRE 308
                + G T + LA +  H  +++ +   + + +      G TAL +A           
Sbjct: 212 VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 271

Query: 309 LLSH 312
           L   
Sbjct: 272 LCKR 275

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  159 bits (406), Expect = 7e-44
 Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 21/244 (8%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           GWTPL  A      ++V  +L + A   +  + G +   LAA  G +K+    L+  A +
Sbjct: 39  GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV 98

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDI----------LTLRKQTPLHLAAE 130
           N     G TA   AA+ G     +FL     A +++          L     T L  AAE
Sbjct: 99  NECDFYGFTAFMEAAVYGKVKALKFLY-KRGANVNLRRKTKEDQERLRKGGATALMDAAE 157

Query: 131 AGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQNN----FPEVAQIFLRAHPSLVTATT 185
            G ++V K+LLD +GA ++A D+ G+  +  A  ++       +    L  H + V    
Sbjct: 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITH-LLLDHGADVNVRG 216

Query: 186 KDGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLV 244
           + G T   +A  +  +G+++ L+  ++  + I+  +     T L LA E     +  +L 
Sbjct: 217 ERGKTPLILAVEKKHLGLVQRLL--EQEHIEINDTDS-DGKTALLLAVELKLKKIAELLC 273

Query: 245 KAGA 248
           K GA
Sbjct: 274 KRGA 277

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  150 bits (381), Expect = 2e-40
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 14/207 (6%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
             +   G TP L+A   G ++L+   L+  A V+  D  G +A   AA +G +K    L 
Sbjct: 66  VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY 125

Query: 75  THKAFINSK----------SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTP 124
              A +N +           + G TAL  AA  G+ ++ + L+ +  A ++      +  
Sbjct: 126 KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA 185

Query: 125 LHLAAEAGQ----LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
           L  A  +        +  LLLD GA ++   ++G+ P+ +A +     + Q  L      
Sbjct: 186 LIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 245

Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEEL 207
           +  T  DG T   +A       + E L
Sbjct: 246 INDTDSDGKTALLLAVELKLKKIAELL 272

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  116 bits (292), Expect = 1e-28
 Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 5/142 (3%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLAAEHGYLKVCDA- 72
            +    G T L+ A  +GH+E++  +L+   A V+  D  GR+AL  A         +A 
Sbjct: 142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAI 201

Query: 73  ---LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA 129
              LL H A +N +   G+T L LA    +  L + L+      I+      +T L LA 
Sbjct: 202 THLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAV 261

Query: 130 EAGQLQVCKLLLDLGASIDATD 151
           E    ++ +LL   GAS D  D
Sbjct: 262 ELKLKKIAELLCKRGASTDCGD 283

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  229 bits (586), Expect = 4e-68
 Identities = 63/328 (19%), Positives = 113/328 (34%), Gaps = 38/328 (11%)

Query: 288 KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSG 347
                   +  + G    +   +                   ++  + G      A  SG
Sbjct: 6   AKQKRNEQLKRWIGSETDLEPPVVK-----------RKKT--KVKFDDG-AVFLAACSSG 51

Query: 348 NENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKT 407
           +   V  LL   G  ++     +G   LH AC   +V +V  L+   A++    D  G  
Sbjct: 52  DTEEVLRLL-ERGADINYAN-VDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWI 108

Query: 408 CLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVT 467
            LH AA+ G+L + E L+ QGA + A +  G   +  A       ++   + +       
Sbjct: 109 PLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEA 168

Query: 468 TNNLA--CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 525
                           L S   +      K+G T LH+AA  G+ +++++L+    ++N 
Sbjct: 169 ARKEEERIMLRDARQWLNSGHIND-VRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNI 227

Query: 526 TDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 585
            D                   G T LH AA  G  + CR LV ++   ++ +    QT  
Sbjct: 228 KDYD-----------------GWTPLHAAAHWGKEEACRILV-ENLCDMEAVNKVGQTAF 269

Query: 586 HLAAEAGQLQVCKLLLDLGASIDATDDQ 613
            +A E     + +L            ++
Sbjct: 270 DVADEDILGYLEELQKKQNLLHSEKREK 297

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  208 bits (533), Expect = 7e-61
 Identities = 58/358 (16%), Positives = 115/358 (32%), Gaps = 61/358 (17%)

Query: 80  INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
           +       +    L    G        V        +           A  +G  +    
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPV-VKRKKTKVKF-DDGAVFLAACSSGDTEEVLR 58

Query: 140 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG 199
           LL+ GA I+  +  G   +H A  ++  ++ +  +  + + +     +G           
Sbjct: 59  LLERGADINYANVDGLTALHQACIDDNVDMVKFLVE-NGANINQPDNEGW---------- 107

Query: 200 SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFT 259
                                      PL  AA  G+ ++   L+  GA     N  G T
Sbjct: 108 --------------------------IPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDT 141

Query: 260 AVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKS 319
            + +A +    ++L+   + + ++         A          D  + L S        
Sbjct: 142 PLDIAEEEAMEELLQNEVNRQGVD------IEAARKEEERIMLRDARQWLNSG------- 188

Query: 320 DPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLAC 379
                 +      ++SG T LH+AA  G   V++LL+  A   V+ +   +G+ PLH A 
Sbjct: 189 ----HIND--VRHAKSGGTALHVAAAKGYTEVLKLLI-QARYDVNIKD-YDGWTPLHAAA 240

Query: 380 FGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
             G      +L+    D +++ +K G+T   +A       + E+   Q    +   + 
Sbjct: 241 HWGKEEACRILVENLCD-MEAVNKVGQTAFDVADEDILGYLEELQKKQNLLHSEKREK 297

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  208 bits (531), Expect = 2e-60
 Identities = 64/348 (18%), Positives = 114/348 (32%), Gaps = 62/348 (17%)

Query: 186 KDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEA----TPLQLAAEGGHANVVR 241
                   +    GS   +E          +  R +             A   G    V 
Sbjct: 6   AKQKRNEQLKRWIGSETDLEPP--------VVKRKKTKVKFDDGAVFLAACSSGDTEEVL 57

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYF 300
            L++ GA     N  G TA+H A  + +  +++ +  + A N+      G   LH AA  
Sbjct: 58  RLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGA-NINQPDNEGWIPLHAAASC 116

Query: 301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
           G  D    L+S            GA       +  G TPL +A     E +++  +N  G
Sbjct: 117 GYLDIAEYLISQ-----------GAHV--GAVNSEGDTPLDIAEEEAMEELLQNEVNRQG 163

Query: 361 VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
           V ++A                        L S   +      K+G T LH+AA  G+ ++
Sbjct: 164 VDIEA--------ARKEEERIMLRDARQWLNSGHIND-VRHAKSGGTALHVAAAKGYTEV 214

Query: 421 VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVG 480
           +++L+    ++N  D  G   +H AA +G       L++    ++               
Sbjct: 215 LKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME--------------- 259

Query: 481 LLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK 528
                      + +K G+T   +A       + E+   Q    +   +
Sbjct: 260 -----------AVNKVGQTAFDVADEDILGYLEELQKKQNLLHSEKRE 296

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  193 bits (494), Expect = 2e-55
 Identities = 60/308 (19%), Positives = 118/308 (38%), Gaps = 27/308 (8%)

Query: 51  DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH 110
           D + +    L    G     +  +  +     K          A  +G  +    L+ + 
Sbjct: 5   DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFD-DGAVFLAACSSGDTEEVLRLL-ER 62

Query: 111 AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA 170
            A I+   +   T LH A     + + K L++ GA+I+  D++G  P+H AA   + ++A
Sbjct: 63  GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIA 122

Query: 171 QIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQL 230
           +  + +  + V A   +G+T   IA  +    +++  +          R  V      + 
Sbjct: 123 EYLI-SQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV---------NRQGVDIEAARKE 172

Query: 231 AAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KL 289
                  +  + L     +     K+G TA+H+AA  G+ +VL+ +  ++  +V  K   
Sbjct: 173 EERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY-DVNIKDYD 231

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
           G T LH AA++G+ +  R L+ +                 E  ++ G T   +A      
Sbjct: 232 GWTPLHAAAHWGKEEACRILVEN-----------LCDM--EAVNKVGQTAFDVADEDILG 278

Query: 350 NVVRLLLN 357
            +  L   
Sbjct: 279 YLEELQKK 286

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  191 bits (488), Expect = 9e-55
 Identities = 61/293 (20%), Positives = 106/293 (36%), Gaps = 14/293 (4%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
                 +    G    +   +    +  V   +G      A   G  +    LL   A I
Sbjct: 8   QKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGA-VFLAACSSGDTEEVLRLLERGADI 66

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           N  +  G TALH A ++   D+ +FLV ++ A I+        PLH AA  G L + + L
Sbjct: 67  NYANVDGLTALHQACIDDNVDMVKFLV-ENGANINQPDNEGWIPLHAAASCGYLDIAEYL 125

Query: 141 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGS 200
           +  GA + A + +G  P+ +A +    E+ Q         V     D             
Sbjct: 126 ISQGAHVGAVNSEGDTPLDIAEEEAMEELLQN-------EVNRQGVDIEAARKEEERIML 178

Query: 201 VGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTA 260
               + L             + +  T L +AA  G+  V+++L++A      ++  G+T 
Sbjct: 179 RDARQWLN--SGHINDVRHAK-SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTP 235

Query: 261 VHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSH 312
           +H AA  G  +    +  +   ++ +  K+G TA  VA               
Sbjct: 236 LHAAAHWGKEEACRILVENLC-DMEAVNKVGQTAFDVADEDILGYLEELQKKQ 287

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  172 bits (439), Expect = 4e-48
 Identities = 70/274 (25%), Positives = 110/274 (40%), Gaps = 24/274 (8%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
                L AC+ G  E V  +L   A ++  + +G +ALH A     + +   L+ + A I
Sbjct: 40  DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI 99

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           N     G   LH AA  GY D+  +L+    A +  +     TPL +A E    ++ +  
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLI-SQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158

Query: 141 LDL-GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG 199
           ++  G  I+A             +    +  Q +L +         K G T  H+AA +G
Sbjct: 159 VNRQGVDIEAAR-------KEEERIMLRDARQ-WLNSGHINDVRHAKSGGTALHVAAAKG 210

Query: 200 SVGVIEELMKFDRSGVISARNRVTEA-----TPLQLAAEGGHANVVRVLVKAGASCTDEN 254
              V++ L        I AR  V        TPL  AA  G     R+LV+        N
Sbjct: 211 YTEVLKLL--------IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN 262

Query: 255 KTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKK 288
           K G TA  +A ++     LEE++  + L    K+
Sbjct: 263 KVGQTAFDVADEDILGY-LEELQKKQNLLHSEKR 295

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  139 bits (353), Expect = 1e-36
 Identities = 43/237 (18%), Positives = 71/237 (29%), Gaps = 78/237 (32%)

Query: 401 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQK 460
           AD   K    +    G    +E  + +  +       GA     A   G    +  LL++
Sbjct: 4   ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGA-VFLAACSSGDTEEVLRLLER 62

Query: 461 GEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 520
           G  ++                           A+ +G T LH A    ++ MV+ L+  G
Sbjct: 63  GADIN--------------------------YANVDGLTALHQACIDDNVDMVKFLVENG 96

Query: 521 AEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 580
           A IN  D                              G+                     
Sbjct: 97  ANINQPDN----------------------------EGW--------------------- 107

Query: 581 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 637
              PLH AA  G L + + L+  GA + A + +G  P+ +A +    E+ Q  +   
Sbjct: 108 --IPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ 162

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  128 bits (325), Expect = 5e-33
 Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 7/159 (4%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +    S G TPL IA      EL+   +N          +  +A               L
Sbjct: 132 VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ------GVDIEAARKEEERIMLRDARQWL 185

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
            +        ++ G TALH+AA  GY ++ + L+      ++I      TPLH AA  G+
Sbjct: 186 NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI-QARYDVNIKDYDGWTPLHAAAHWGK 244

Query: 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI 172
            + C++L++    ++A +  GQ    VA ++    + ++
Sbjct: 245 EEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEEL 283

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  107 bits (270), Expect = 9e-26
 Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 1/140 (0%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N+Q                 +    + + H       + G +ALH+AA  GY +V   L
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           +  +  +N K   G T LH AA  G  + CR LV ++   ++ +    QT   +A E   
Sbjct: 219 IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILV-ENLCDMEAVNKVGQTAFDVADEDIL 277

Query: 134 LQVCKLLLDLGASIDATDDQ 153
             + +L            ++
Sbjct: 278 GYLEELQKKQNLLHSEKREK 297

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  225 bits (575), Expect = 8e-67
 Identities = 46/300 (15%), Positives = 100/300 (33%), Gaps = 45/300 (15%)

Query: 336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAA 395
           GM    +   +     ++  L+S           +G++  + A    +V +V  LL+  A
Sbjct: 1   GMDLSRIN--TWKSKQLKSFLSSK--DTFKAD-VHGHSASYYAIADNNVRLVCTLLNAGA 55

Query: 396 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIIN 455
                     +  LH AAT    ++V++LL  G + +  D  G  +++ A   G++  + 
Sbjct: 56  LK---NLLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVK 112

Query: 456 TLLQKGEKVDVTTNN-------LAC--GHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT 506
             ++K  ++              A     V++V   LS              +C+HI   
Sbjct: 113 LFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS--TFDLAILLSCIHITIK 170

Query: 507 HGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRT-ALHLAAMNGYADLCRF 565
           +GH+ M+ +LL      N  + +                      + LA  N   ++ + 
Sbjct: 171 NGHVDMMILLLDYMTSTNTNNSL-----------------LFIPDIKLAIDNKDIEMLQA 213

Query: 566 LVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN 625
           L   +   I        +           ++ K++++      +        I    + +
Sbjct: 214 LF-KYDINIY-------SANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLD 265

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  203 bits (518), Expect = 5e-59
 Identities = 40/284 (14%), Positives = 89/284 (31%), Gaps = 24/284 (8%)

Query: 230 LAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKL 289
                  +  ++  +         +  G +A + A  + + +++  + ++ A    +   
Sbjct: 5   SRINTWKSKQLKSFLS-SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGA-LK-NLLE 61

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
               LH AA       V+ LL             G         + G T L+ A  SGN 
Sbjct: 62  NEFPLHQAATLEDTKIVKILLFS-----------GLDD--SQFDDKGNTALYYAVDSGNM 108

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
             V+L +     ++    +       + A     V++V   LS              +C+
Sbjct: 109 QTVKLFV-KKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS--TFDLAILLSCI 165

Query: 410 HIAATHGHLQMVEVLLGQGAEINATDKGGA-RSIHTAARYGHVGIINTLLQKGEKVDVTT 468
           HI   +GH+ M+ +LL      N  +       I  A     + ++  L +    +  + 
Sbjct: 166 HITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY-SA 224

Query: 469 NNLAC--GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL 510
           N          +  +++ +  +  +S        +        +
Sbjct: 225 NLENVLLDDAEIAKMIIEKHVEY-KSDSYTKDLDIVKNNKLDEI 267

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  188 bits (480), Expect = 7e-54
 Identities = 43/307 (14%), Positives = 99/307 (32%), Gaps = 40/307 (13%)

Query: 158 IHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVIS 217
           +         ++                  G++ ++ A    +V ++  L        ++
Sbjct: 4   LSRINTWKSKQLKSFLSSKD---TFKADVHGHSASYYAIADNNVRLVCTL--------LN 52

Query: 218 AR---NRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
           A    N +    PL  AA      +V++L+ +G   +  +  G TA++ A  +G+ Q ++
Sbjct: 53  AGALKNLLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVK 112

Query: 275 EMRSSKA-LNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGS 333
                   L  Y K    T+ + A        V   LS +P T                 
Sbjct: 113 LFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLA------------- 159

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNP-LHLACFGGHVTVVGLLLS 392
              ++ +H+   +G+ +++ LLL       +       + P + LA     + ++  L  
Sbjct: 160 -ILLSCIHITIKNGHVDMMILLL-DYMTSTNTNN-SLLFIPDIKLAIDNKDIEMLQALFK 216

Query: 393 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452
                      N  +           ++ ++++ +  E  +        I    +   + 
Sbjct: 217 YDI--------NIYSANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDEII 268

Query: 453 IINTLLQ 459
             N  L+
Sbjct: 269 SKNKELR 275

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  178 bits (455), Expect = 2e-50
 Identities = 38/360 (10%), Positives = 90/360 (25%), Gaps = 98/360 (27%)

Query: 60  LAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTL 119
                   K                  G +A + A  +    L   L+ +  A+ ++L  
Sbjct: 5   SRINTWKSKQL-KSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLL-NAGALKNLLE- 61

Query: 120 RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179
             + PLH AA     ++ K+LL  G      DD+G   ++ A  +   +  ++F+     
Sbjct: 62  -NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFV-KKNW 119

Query: 180 LVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANV 239
            +    K G                                     T    A      ++
Sbjct: 120 RLMFYGKTGW-----------------------------------KTSFYHAVMLNDVSI 144

Query: 240 VRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAY 299
           V   +                                      + +   + ++ +H+   
Sbjct: 145 VSYFLSEIP----------------------------------STFDLAILLSCIHITIK 170

Query: 300 FGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTP-LHLAAYSGNENVVRLLLNS 358
            G  D +  LL +             S      +     P + LA  + +  +++ L   
Sbjct: 171 NGHVDMMILLLDY-----------MTST--NTNNSLLFIPDIKLAIDNKDIEMLQALF-K 216

Query: 359 AGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL 418
             + + +                    +  +++ +  +  +S        +        +
Sbjct: 217 YDINIYS--------ANLENVLLDDAEIAKMIIEKHVE-YKSDSYTKDLDIVKNNKLDEI 267

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  173 bits (442), Expect = 1e-48
 Identities = 49/334 (14%), Positives = 93/334 (27%), Gaps = 68/334 (20%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           G     I       + +     +       D  G SA + A     +++   LL   A  
Sbjct: 1   GMDLSRINT--WKSKQL-KSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK 57

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           N         LH AA      + + L+            +  T L+ A ++G +Q  KL 
Sbjct: 58  NLLE--NEFPLHQAATLEDTKIVKILL-FSGLDDSQFDDKGNTALYYAVDSGNMQTVKLF 114

Query: 141 LDLGASIDATDDQGQK-PIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG 199
           +     +      G K   + A   N   +   FL   P   T                 
Sbjct: 115 VKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP--STFDLAILL---------- 162

Query: 200 SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFT 259
                                     + + +  + GH +++ +L+    S    N   F 
Sbjct: 163 --------------------------SCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFI 196

Query: 260 AV-HLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVK 318
               LA  N   ++L+ +      N+Y      +A         A+  + ++        
Sbjct: 197 PDIKLAIDNKDIEMLQALFKYDI-NIY------SANLENVLLDDAEIAKMIIEK------ 243

Query: 319 SDPPTGASFLGELGSESGMTPLHLAAYSGNENVV 352
                      E  S+S    L +   +  + ++
Sbjct: 244 -----HV----EYKSDSYTKDLDIVKNNKLDEII 268

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  172 bits (438), Expect = 4e-48
 Identities = 38/276 (13%), Positives = 86/276 (31%), Gaps = 19/276 (6%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
            K    G +    A    ++ LV T+LN  A  ++ +      LH AA     K+   LL
Sbjct: 25  FKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILL 82

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR-KQTPLHLAAEAGQ 133
                 +     G TAL+ A  +G     +  V      +        +T  + A     
Sbjct: 83  FSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFV-KKNWRLMFYGKTGWKTSFYHAVMLND 141

Query: 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCA- 192
           + +    L    S           IH+  +N   ++  + L  + +              
Sbjct: 142 VSIVSYFLSEIPSTFDLAI-LLSCIHITIKNGHVDMMILLL-DYMTSTNTNNSLLFIPDI 199

Query: 193 HIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD 252
            +A     + +++ L              +   +          A + +++++       
Sbjct: 200 KLAIDNKDIEMLQAL--------FKYDINIY--SANLENVLLDDAEIAKMIIEKHVEYKS 249

Query: 253 ENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKK 288
           ++ T      +   N  ++++ + +  + + V   K
Sbjct: 250 DSYTKDL--DIVKNNKLDEIISKNKELRLMYVNCVK 283

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 86.0 bits (214), Expect = 2e-18
 Identities = 14/127 (11%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 10  ISK-ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRS-ALHLAAEHGYL 67
           +S+       +I  + + I    GH++++  +L+     +  +       + LA ++  +
Sbjct: 149 LSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDI 208

Query: 68  KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHL 127
           ++  AL  +   I        +A     +   A++ + ++ +        +  K   +  
Sbjct: 209 EMLQALFKYDINIY-------SANLENVLLDDAEIAKMII-EKHVEYKSDSYTKDLDIVK 260

Query: 128 AAEAGQL 134
             +  ++
Sbjct: 261 NNKLDEI 267

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  213 bits (546), Expect = 2e-63
 Identities = 66/279 (23%), Positives = 102/279 (36%), Gaps = 46/279 (16%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
           +     +  A   G     R L+  AG  V     +     LH A     + +V   +S+
Sbjct: 7   DYSTWDIVKATQYGIYERCRELV-EAGYDVRQPD-KENVTLLHWAAINNRIDLVKYYISK 64

Query: 394 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGI 453
            A + Q       T LH A   GHL MV  L+  GA+ +  D  G   IH AA++GH  I
Sbjct: 65  GAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSI 124

Query: 454 INTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGH-LQM 512
           +  L+ KG+ VD                            D+NG T L  AA   H +  
Sbjct: 125 VAYLIAKGQDVD--------------------------MMDQNGMTPLMWAAYRTHSVDP 158

Query: 513 VEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAA 572
             +LL     +N  DK                    TALH A + G   +   L+ +  A
Sbjct: 159 TRLLLTFNVSVNLGDKYH----------------KNTALHWAVLAGNTTVISLLL-EAGA 201

Query: 573 VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD 611
            +D   ++ ++ L LA +   + +   L +   +    +
Sbjct: 202 NVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  207 bits (530), Expect = 3e-61
 Identities = 60/271 (22%), Positives = 105/271 (38%), Gaps = 48/271 (17%)

Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 428
           +     +  A   G       L+    D+ +  DK   T LH AA +  + +V+  + +G
Sbjct: 7   DYSTWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKG 65

Query: 429 AEINATDK-GGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAA 487
           A ++       +  +H A R GH+ ++  L++ G    +                     
Sbjct: 66  AIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSL--------------------- 104

Query: 488 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVG 547
                 D  G +C+H+AA  GH  +V  L+ +G +++  D+                  G
Sbjct: 105 -----IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQN-----------------G 142

Query: 548 RTALHLAAMNGY-ADLCRFLVHDHAAVIDILT-LRKQTPLHLAAEAGQLQVCKLLLDLGA 605
            T L  AA   +  D  R L+      +++     K T LH A  AG   V  LLL+ GA
Sbjct: 143 MTPLMWAAYRTHSVDPTRLLL-TFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGA 201

Query: 606 SIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 636
           ++DA + +G+  + +A Q     +      A
Sbjct: 202 NVDAQNIKGESALDLAKQRKNVWMINHLQEA 232

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  204 bits (522), Expect = 4e-60
 Identities = 64/277 (23%), Positives = 107/277 (38%), Gaps = 45/277 (16%)

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSH 312
           +      +  A Q G  +   E+  +   +V    K  VT LH AA   + D V+  +S 
Sbjct: 6   DDYSTWDIVKATQYGIYERCRELVEAGY-DVRQPDKENVTLLHWAAINNRIDLVKYYISK 64

Query: 313 VPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGY 372
                      GA  + +LG +   TPLH A   G+ ++V  L+   G          G 
Sbjct: 65  -----------GAI-VDQLGGDLNSTPLHWATRQGHLSMVVQLM-KYGADPSLID-GEGC 110

Query: 373 NPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGH-LQMVEVLLGQGAEI 431
           + +HLA   GH ++V  L+++  D +   D+NG T L  AA   H +    +LL     +
Sbjct: 111 SCIHLAAQFGHTSIVAYLIAKGQD-VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV 169

Query: 432 NATDK-GGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLL 490
           N  DK     ++H A   G+  +I+ LL+ G  VD                         
Sbjct: 170 NLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD------------------------- 204

Query: 491 QSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 527
            + +  G++ L +A    ++ M+  L          +
Sbjct: 205 -AQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  181 bits (461), Expect = 9e-52
 Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 8/238 (3%)

Query: 47  VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 106
           +   D      +  A ++G  + C  L+     +    +   T LH AA+N   DL ++ 
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61

Query: 107 VHDHAAVIDILTL-RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN 165
           +    A++D L      TPLH A   G L +   L+  GA     D +G   IH+AAQ  
Sbjct: 62  I-SKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFG 120

Query: 166 FPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG-SVGVIEELMKFDRSGV-ISARNRVT 223
              +    + A    V    ++G T    AA +  SV     L+ F    V ++  ++  
Sbjct: 121 HTSIVAYLI-AKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF---NVSVNLGDKYH 176

Query: 224 EATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281
           + T L  A   G+  V+ +L++AGA+   +N  G +A+ LA Q  +  ++  ++ ++ 
Sbjct: 177 KNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  175 bits (447), Expect = 6e-50
 Identities = 50/237 (21%), Positives = 80/237 (33%), Gaps = 45/237 (18%)

Query: 400 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ 459
             D      +  A  +G  +    L+  G ++   DK     +H AA    + ++   + 
Sbjct: 4   HIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYIS 63

Query: 460 KGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ 519
           KG  VD    +L                           T LH A   GHL MV  L+  
Sbjct: 64  KGAIVDQLGGDL-------------------------NSTPLHWATRQGHLSMVVQLMKY 98

Query: 520 GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTL 579
           GA+ +  D                   G + +HLAA  G+  +  +L+      +D++  
Sbjct: 99  GADPSLIDG-----------------EGCSCIHLAAQFGHTSIVAYLI-AKGQDVDMMDQ 140

Query: 580 RKQTPLHLAAEAG-QLQVCKLLLDLGASIDATDDQ-GQKPIHVAAQNNFPEVAQIFL 634
              TPL  AA     +   +LLL    S++  D       +H A       V  + L
Sbjct: 141 NGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLL 197

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  141 bits (359), Expect = 4e-38
 Identities = 39/205 (19%), Positives = 69/205 (33%), Gaps = 44/205 (21%)

Query: 431 INATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLL 490
           +   D      I  A +YG       L++ G  V                          
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVR------------------------- 36

Query: 491 QSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTA 550
              DK   T LH AA +  + +V+  + +GA ++                     +  T 
Sbjct: 37  -QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG----------------DLNSTP 79

Query: 551 LHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDAT 610
           LH A   G+  +   L+  + A   ++     + +HLAA+ G   +   L+  G  +D  
Sbjct: 80  LHWATRQGHLSMVVQLM-KYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMM 138

Query: 611 DDQGQKPIHVAAQN-NFPEVAQIFL 634
           D  G  P+  AA   +  +  ++ L
Sbjct: 139 DQNGMTPLMWAAYRTHSVDPTRLLL 163

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  140 bits (356), Expect = 1e-37
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 3/158 (1%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
             TPL  A  +GH+ +V  ++   A   + D EG S +HLAA+ G+  +   L+     +
Sbjct: 76  NSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV 135

Query: 81  NSKSRVGRTALHLAAMNGY-ADLCRFLVHDHAAVIDILT-LRKQTPLHLAAEAGQLQVCK 138
           +   + G T L  AA   +  D  R L+      +++     K T LH A  AG   V  
Sbjct: 136 DMMDQNGMTPLMWAAYRTHSVDPTRLLL-TFNVSVNLGDKYHKNTALHWAVLAGNTTVIS 194

Query: 139 LLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176
           LLL+ GA++DA + +G+  + +A Q     +      A
Sbjct: 195 LLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEA 232

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  212 bits (543), Expect = 8e-63
 Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 65/304 (21%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
             G TPL +A+ SG                       G    +         V+   + +
Sbjct: 8   PDGFTPLMIASCSGG----------------------GLETGNSEEEEDAPAVISDFIYQ 45

Query: 394 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGI 453
            A L    D+ G+T LH+AA +      + LL   A+ N  D  G   +H A      G+
Sbjct: 46  GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGV 105

Query: 454 INTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 513
              L++                          A DL  +   +G T L +AA      M+
Sbjct: 106 FQILIRNR------------------------ATDL-DARMHDGTTPLILAARLAVEGML 140

Query: 514 EVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV 573
           E L+   A++NA D +                 G++ALH AA     D    L+  + A 
Sbjct: 141 EDLINSHADVNAVDDL-----------------GKSALHWAAAVNNVDAAVVLL-KNGAN 182

Query: 574 IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
            D+   R++TPL LAA  G  +  K+LLD  A+ D TD   + P  +A +    ++ ++ 
Sbjct: 183 KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242

Query: 634 LRAH 637
              H
Sbjct: 243 DLEH 246

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  206 bits (526), Expect = 2e-60
 Identities = 67/319 (21%), Positives = 106/319 (33%), Gaps = 77/319 (24%)

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHV 313
              GFT + +A+ +G                     G+   +          + + +   
Sbjct: 7   GPDGFTPLMIASCSGG--------------------GLETGNSEEEEDAPAVISDFIYQ- 45

Query: 314 PGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYN 373
                     GAS   +    +G T LHLAA     +  + LL  A    + Q    G  
Sbjct: 46  ----------GASLHNQ-TDRTGETALHLAARYSRSDAAKRLL-EASADANIQD-NMGRT 92

Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
           PLH A       V  +L+   A  L +   +G T L +AA      M+E L+   A++NA
Sbjct: 93  PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA 152

Query: 434 TDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSA 493
            D  G  ++H AA   +V     LL+ G   D+                           
Sbjct: 153 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQ-------------------------- 186

Query: 494 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
           +   +T L +AA  G  +  +VLL   A  + TD                  + R    +
Sbjct: 187 NNREETPLFLAAREGSYETAKVLLDHFANRDITDH-----------------MDRLPRDI 229

Query: 554 AAMNGYADLCRFLVHDHAA 572
           A    + D+ R L  +H  
Sbjct: 230 AQERMHHDIVRLLDLEHHH 248

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  178 bits (453), Expect = 2e-50
 Identities = 59/312 (18%), Positives = 100/312 (32%), Gaps = 73/312 (23%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
            TPL +A+ +G                     G +  +   + + P V   F+    SL 
Sbjct: 11  FTPLMIASCSGG--------------------GLETGNSEEEEDAPAVISDFIYQGASLH 50

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
             T + G T                                     L LAA    ++  +
Sbjct: 51  NQTDRTGET------------------------------------ALHLAARYSRSDAAK 74

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYF 300
            L++A A    ++  G T +H A       V + +  ++A ++ ++   G T L +AA  
Sbjct: 75  RLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 134

Query: 301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
                + +L++             A        + G + LH AA   N +   +LL   G
Sbjct: 135 AVEGMLEDLINS-----------HADV--NAVDDLGKSALHWAAAVNNVDAAVVLL-KNG 180

Query: 361 VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
              D Q       PL LA   G      +LL   A+     D   +    IA    H  +
Sbjct: 181 ANKDMQN-NREETPLFLAAREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDI 238

Query: 421 VEVLLGQGAEIN 432
           V +L  +    +
Sbjct: 239 VRLLDLEHHHHH 250

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  163 bits (415), Expect = 2e-45
 Identities = 60/274 (21%), Positives = 93/274 (33%), Gaps = 51/274 (18%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVF--------------DQEGRSALHL 60
           N +   G+TPL+IA   G                V               D+ G +ALHL
Sbjct: 4   NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHL 63

Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 120
           AA +        LL   A  N +  +GRT LH A       + + L+ + A  +D     
Sbjct: 64  AARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD 123

Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
             TPL LAA      + + L++  A ++A DD G+  +H AA  N  + A   L  + + 
Sbjct: 124 GTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAV-VLLKNGAN 182

Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
                                                        TPL LAA  G     
Sbjct: 183 KDMQNNREE------------------------------------TPLFLAAREGSYETA 206

Query: 241 RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
           +VL+   A+    +        +A +  H+ ++ 
Sbjct: 207 KVLLDHFANRDITDHMDRLPRDIAQERMHHDIVR 240

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  158 bits (403), Expect = 8e-44
 Identities = 59/272 (21%), Positives = 101/272 (37%), Gaps = 35/272 (12%)

Query: 47  VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 106
           V+V   +G + L +A+  G                     G    +         +    
Sbjct: 3   VNVRGPDGFTPLMIASCSGG--------------------GLETGNSEEEEDAPAVISDF 42

Query: 107 VHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNF 166
           ++  A++ +      +T LHLAA   +    K LL+  A  +  D+ G+ P+H A   + 
Sbjct: 43  IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA 102

Query: 167 PEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEA- 225
             V QI +R   + + A   DG T   +AA     G++E+L        I++   V    
Sbjct: 103 QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDL--------INSHADVNAVD 154

Query: 226 ----TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281
               + L  AA   + +   VL+K GA+   +N    T + LAA+ G  +  + +    A
Sbjct: 155 DLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 214

Query: 282 LNVYSK-KLGVTALHVAAYFGQADTVRELLSH 312
            N      +      +A      D VR L   
Sbjct: 215 -NRDITDHMDRLPRDIAQERMHHDIVRLLDLE 245

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  149 bits (378), Expect = 2e-40
 Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 29/205 (14%)

Query: 430 EINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADL 489
           ++N     G   +  A+  G         ++                 V+   + + A L
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEE------------DAPAVISDFIYQGASL 49

Query: 490 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRT 549
               D+ G+T LH+AA +      + LL   A+ N  D +                 GRT
Sbjct: 50  HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNM-----------------GRT 92

Query: 550 ALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA 609
            LH A       + + L+ + A  +D       TPL LAA      + + L++  A ++A
Sbjct: 93  PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA 152

Query: 610 TDDQGQKPIHVAAQNNFPEVAQIFL 634
            DD G+  +H AA  N  + A + L
Sbjct: 153 VDDLGKSALHWAAAVNNVDAAVVLL 177

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  118 bits (298), Expect = 8e-30
 Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 1/134 (0%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           L+ +   G TPL++A       ++  ++N+HA V+  D  G+SALH AA    +     L
Sbjct: 117 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 176

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           L + A  + ++    T L LAA  G  +  + L+ DH A  DI     + P  +A E   
Sbjct: 177 LKNGANKDMQNNREETPLFLAAREGSYETAKVLL-DHFANRDITDHMDRLPRDIAQERMH 235

Query: 134 LQVCKLLLDLGASI 147
             + +LL       
Sbjct: 236 HDIVRLLDLEHHHH 249

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 62.1 bits (152), Expect = 1e-10
 Identities = 15/69 (21%), Positives = 26/69 (37%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           + Q +   TPL +A   G  E    +L++ A  D+ D   R    +A E  +  +   L 
Sbjct: 184 DMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLD 243

Query: 75  THKAFINSK 83
                 +  
Sbjct: 244 LEHHHHHHH 252

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  210 bits (536), Expect = 4e-62
 Identities = 74/280 (26%), Positives = 106/280 (37%), Gaps = 52/280 (18%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLN---SAGVQVDAQTQENGYNPLHLACFGGHVTVVGLL 390
           E G TPLH+A   GN   V  L+N     G ++D         PLHLA      +VV LL
Sbjct: 7   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN-NLRQTPLHLAVITTLPSVVRLL 65

Query: 391 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAE----INATDKGGARSIHTAA 446
           ++  A    + D++G+T  H+A  H     +  LL   A     + A +  G  ++H A 
Sbjct: 66  VTAGASP-MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 124

Query: 447 RYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT 506
                                           V LLL R AD+     K+G++ L  A  
Sbjct: 125 NTECQET-------------------------VQLLLERGADIDAVDIKSGRSPLIHAVE 159

Query: 507 HGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           +  L MV++LL  GA +NA                     G +ALH A+  G   L R L
Sbjct: 160 NNSLSMVQLLLQHGANVNAQMY-----------------SGSSALHSASGRGLLPLVRTL 202

Query: 567 VHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
           V    A   +      TPL +A     + + +      AS
Sbjct: 203 V-RSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  206 bits (527), Expect = 9e-61
 Identities = 57/270 (21%), Positives = 102/270 (37%), Gaps = 44/270 (16%)

Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRA----ADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
           E+G  PLH+A   G++  V  L++       +L    +   +T LH+A       +V +L
Sbjct: 7   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLL 65

Query: 425 LGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLS 484
           +  GA   A D+ G  + H A  +     +  LL       +                  
Sbjct: 66  VTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE--------------- 110

Query: 485 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKS 544
                  + + +G T LH+A      + V++LL +GA+I+A D                 
Sbjct: 111 -------ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDI---------------- 147

Query: 545 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 604
           + GR+ L  A  N    + + L+  H A ++       + LH A+  G L + + L+  G
Sbjct: 148 KSGRSPLIHAVENNSLSMVQLLL-QHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG 206

Query: 605 ASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           A     +     P+ VA      ++ +   
Sbjct: 207 ADSSLKNCHNDTPLMVARSRRVIDILRGKA 236

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  193 bits (493), Expect = 4e-56
 Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 47/275 (17%)

Query: 254 NKTGFTAVHLAAQNGHNQVLE---EMRSSKALNVYSK-KLGVTALHVAAYFGQADTVREL 309
           ++ G T +H+A   G+   +     +       +     L  T LH+A        VR L
Sbjct: 6   DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65

Query: 310 LSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLN---SAGVQVDAQ 366
           ++            GAS         G T  HLA    +   +R LL+      + ++A+
Sbjct: 66  VTA-----------GASP--MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEAR 112

Query: 367 TQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLG 426
              +G   LH+A        V LLL R AD+     K+G++ L  A  +  L MV++LL 
Sbjct: 113 N-YDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ 171

Query: 427 QGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRA 486
            GA +NA    G+ ++H+A+  G + ++ TL++ G    +                    
Sbjct: 172 HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSL-------------------- 211

Query: 487 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
                  + +  T L +A +   + ++     + A
Sbjct: 212 ------KNCHNDTPLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  188 bits (479), Expect = 3e-54
 Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 51/286 (17%)

Query: 180 LVTATTKDGNTCAHIAAMQGSVGVIEELMK-FDRSGV-ISARNRVTEATPLQLAAEGGHA 237
           + T   +DG+T  HIA +QG++  +  L+  F + G  +   N     TPL LA      
Sbjct: 1   MATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNN-LRQTPLHLAVITTLP 59

Query: 238 NVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVA 297
           +VVR+LV AGAS    ++ G TA HLA ++                              
Sbjct: 60  SVVRLLVTAGASPMALDRHGQTAAHLACEHRS---------------------------- 91

Query: 298 AYFGQADTVRELLSHVPGTVKSDPPTGASFLG--ELGSESGMTPLHLAAYSGNENVVRLL 355
                   +R LL              A      E  +  G+T LH+A  +  +  V+LL
Sbjct: 92  -----PTCLRALLDS-----------AAPGTLDLEARNYDGLTALHVAVNTECQETVQLL 135

Query: 356 LNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH 415
           L   G  +DA   ++G +PL  A     +++V LLL   A+ + +   +G + LH A+  
Sbjct: 136 L-ERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGR 193

Query: 416 GHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           G L +V  L+  GA+ +  +      +  A     + I+     + 
Sbjct: 194 GLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  175 bits (447), Expect = 7e-50
 Identities = 70/246 (28%), Positives = 112/246 (45%), Gaps = 16/246 (6%)

Query: 14  LNKQTSIGWTPLLIACNRGHME----LVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKV 69
             +    G TPL IA  +G++     LVN        +D+++   ++ LHLA       V
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV 61

Query: 70  CDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV----IDILTLRKQTPL 125
              L+T  A   +  R G+TA HLA  +      R L+ D AA     ++       T L
Sbjct: 62  VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALL-DSAAPGTLDLEARNYDGLTAL 120

Query: 126 HLAAEAGQLQVCKLLLDLGASIDATDDQ-GQKPIHVAAQNNFPEVAQIFLRAHPSLVTAT 184
           H+A      +  +LLL+ GA IDA D + G+ P+  A +NN   + Q+ L  H + V A 
Sbjct: 121 HVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLL-QHGANVNAQ 179

Query: 185 TKDGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVL 243
              G++  H A+ +G + ++  L++   SG   S +N     TPL +A      +++R  
Sbjct: 180 MYSGSSALHSASGRGLLPLVRTLVR---SGADSSLKNC-HNDTPLMVARSRRVIDILRGK 235

Query: 244 VKAGAS 249
               AS
Sbjct: 236 ATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  129 bits (328), Expect = 6e-34
 Identities = 60/252 (23%), Positives = 96/252 (38%), Gaps = 51/252 (20%)

Query: 431 INATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLL 490
               D+ G   +H A   G++  ++ L+                      L      + L
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVN---------------------LFQQGGRE-L 39

Query: 491 QSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTA 550
              +   +T LH+A       +V +L+  GA   A D+                  G+TA
Sbjct: 40  DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDR-----------------HGQTA 82

Query: 551 LHLAAMNGYADLCRFLVHDHAAV----IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
            HLA  +      R L+ D AA     ++       T LH+A      +  +LLL+ GA 
Sbjct: 83  AHLACEHRSPTCLRALL-DSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD 141

Query: 607 IDATDDQ-GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL-IAAGKHCEGM 664
           IDA D + G+ P+  A +NN   + Q+ L  H + V A       A  L  A+G+    +
Sbjct: 142 IDAVDIKSGRSPLIHAVENNSLSMVQLLL-QHGANVNAQMYSGSSA--LHSASGRGLLPL 198

Query: 665 ATELLALAAGAD 676
               L + +GAD
Sbjct: 199 V-RTL-VRSGAD 208

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  121 bits (306), Expect = 4e-31
 Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 2/141 (1%)

Query: 7   GTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQE-GRSALHLAAEHG 65
               +  L  +   G T L +A N    E V  +L   A +D  D + GRS L  A E+ 
Sbjct: 102 AAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN 161

Query: 66  YLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 125
            L +   LL H A +N++   G +ALH A+  G   L R LV    A   +      TPL
Sbjct: 162 SLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLV-RSGADSSLKNCHNDTPL 220

Query: 126 HLAAEAGQLQVCKLLLDLGAS 146
            +A     + + +      AS
Sbjct: 221 MVARSRRVIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  119 bits (301), Expect = 2e-30
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 18/150 (12%)

Query: 489 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGR 548
           +   AD++G T LHIA   G+L  V  L+             +        ++  + + +
Sbjct: 1   MATRADEDGDTPLHIAVVQGNLPAVHRLV-------------NLFQQGGRELDIYNNLRQ 47

Query: 549 TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS-- 606
           T LHLA +     + R LV    A    L    QT  HLA E       + LLD  A   
Sbjct: 48  TPLHLAVITTLPSVVRLLV-TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGT 106

Query: 607 --IDATDDQGQKPIHVAAQNNFPEVAQIFL 634
             ++A +  G   +HVA      E  Q+ L
Sbjct: 107 LDLEARNYDGLTALHVAVNTECQETVQLLL 136

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  208 bits (532), Expect = 1e-61
 Identities = 68/282 (24%), Positives = 102/282 (36%), Gaps = 58/282 (20%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
             + LH AA  G  D    L+             GA+   +  SE   TPL  AA + + 
Sbjct: 11  KRSPLHAAAEAGHVDICHMLVQA-----------GANI--DTCSEDQRTPLMEAAENNHL 57

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
             V+ L+  AG  VD +    G   LHLA   GH  VV  LLS     +   D  G T +
Sbjct: 58  EAVKYLI-KAGALVDPKD-AEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPM 115

Query: 410 HIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
             A  + H+ +V++LL +G++IN  D      +H AA  G V I   LL     +     
Sbjct: 116 IWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLH---- 171

Query: 470 NLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKV 529
                                 + + +G + LHIAA       V + L + +++   +K 
Sbjct: 172 ----------------------AVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNK- 208

Query: 530 CDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHA 571
                            G T L  A++N        +     
Sbjct: 209 ----------------EGETPLQCASLNSQVWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  206 bits (527), Expect = 7e-61
 Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 26/243 (10%)

Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
            +N ++ LH AA  GH+ +  +L+  GA I+   +     +  AA   H+  +  L++ G
Sbjct: 8   HQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAG 67

Query: 462 EKVDVTTNN------LA--CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 513
             VD           LA   GH  VV  LLS     +   D  G T +  A  + H+ +V
Sbjct: 68  ALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLV 127

Query: 514 EVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV 573
           ++LL +G++IN  D                       LH AA +G  D+   L+      
Sbjct: 128 KLLLSKGSDINIRDN-----------------EENICLHWAAFSGCVDIAEILL-AAKCD 169

Query: 574 IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
           +  + +   +PLH+AA   +     L L   + +   + +G+ P+  A+ N+    A   
Sbjct: 170 LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQM 229

Query: 634 LRA 636
            +A
Sbjct: 230 SKA 232

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  183 bits (468), Expect = 9e-53
 Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 22/251 (8%)

Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANV 239
                ++  +  H AA  G V +   L++   +G  I   +   + TPL  AAE  H   
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQ---AGANIDTCSE-DQRTPLMEAAENNHLEA 59

Query: 240 VRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAA 298
           V+ L+KAGA    ++  G T +HLAA+ GH +V++ + S+  ++V  +   G T +  A 
Sbjct: 60  VKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWAT 119

Query: 299 YFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNS 358
            +   D V+ LLS            G+     +        LH AA+SG  ++  +LL +
Sbjct: 120 EYKHVDLVKLLLSK-----------GSDI--NIRDNEENICLHWAAFSGCVDIAEILL-A 165

Query: 359 AGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL 418
           A   + A    +G +PLH+A        V L LSR +D +   +K G+T L  A+ +  +
Sbjct: 166 AKCDLHAVN-IHGDSPLHIAARENRYDCVVLFLSRDSD-VTLKNKEGETPLQCASLNSQV 223

Query: 419 QMVEVLLGQGA 429
                +     
Sbjct: 224 WSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  179 bits (456), Expect = 4e-51
 Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 14/239 (5%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
             +     +PL  A   GH+++ + ++   A +D   ++ R+ L  AAE+ +L+    L+
Sbjct: 5   KMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLI 64

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
              A ++ K   G T LHLAA  G+ ++ ++L+ +    ++       TP+  A E   +
Sbjct: 65  KAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHV 124

Query: 135 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHI 194
            + KLLL  G+ I+  D++    +H AA +   ++A+  L A    + A    G++  HI
Sbjct: 125 DLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAE-ILLAAKCDLHAVNIHGDSPLHI 183

Query: 195 AAMQGSVGVIEELMKFDRSGVISARNRVTEA-----TPLQLAAEGGHANVVRVLVKAGA 248
           AA +     +           +S  + VT       TPLQ A+          + KA  
Sbjct: 184 AARENRYDCVVLF--------LSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  177 bits (452), Expect = 1e-50
 Identities = 68/317 (21%), Positives = 101/317 (31%), Gaps = 85/317 (26%)

Query: 80  INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
              + +  R+ LH AA  G+ D+C  LV    A ID  +  ++TPL  AAE   L+  K 
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLV-QAGANIDTCSEDQRTPLMEAAENNHLEAVKY 62

Query: 140 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG 199
           L+  GA +D  D +G   +H+AA+    EV Q  L      V      G T         
Sbjct: 63  LIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWT--------- 113

Query: 200 SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFT 259
                                      P+  A E  H ++V++L+  G+     +     
Sbjct: 114 ---------------------------PMIWATEYKHVDLVKLLLSKGSDINIRDNEENI 146

Query: 260 AVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKS 319
            +H AA +G                                   D    LL+        
Sbjct: 147 CLHWAAFSGC---------------------------------VDIAEILLAA------- 166

Query: 320 DPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLAC 379
                        +  G +PLH+AA     + V L L S    V  +  + G  PL  A 
Sbjct: 167 ----KCDL--HAVNIHGDSPLHIAARENRYDCVVLFL-SRDSDVTLKN-KEGETPLQCAS 218

Query: 380 FGGHVTVVGLLLSRAAD 396
               V     +     D
Sbjct: 219 LNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  177 bits (452), Expect = 1e-50
 Identities = 63/271 (23%), Positives = 105/271 (38%), Gaps = 41/271 (15%)

Query: 44  HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLC 103
           H    +  Q  RS LH AAE G++ +C  L+   A I++ S   RT L  AA N + +  
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAV 60

Query: 104 RFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS-IDATDDQGQKPIHVAA 162
           ++L+    A++D       T LHLAA+ G  +V + LL  G   ++  DD G  P+  A 
Sbjct: 61  KYLI-KAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWAT 119

Query: 163 QNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRV 222
           +    ++ +  L +  S +     + N                                 
Sbjct: 120 EYKHVDLVK-LLLSKGSDINIRDNEEN--------------------------------- 145

Query: 223 TEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKAL 282
                L  AA  G  ++  +L+ A       N  G + +H+AA+      +    S  + 
Sbjct: 146 ---ICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDS- 201

Query: 283 NVYSK-KLGVTALHVAAYFGQADTVRELLSH 312
           +V  K K G T L  A+   Q  +  ++   
Sbjct: 202 DVTLKNKEGETPLQCASLNSQVWSALQMSKA 232

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  141 bits (359), Expect = 3e-38
 Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 43/204 (21%)

Query: 431 INATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLL 490
                +     +H AA  GHV I + L+Q G  +D                         
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANID------------------------- 38

Query: 491 QSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTA 550
            +  ++ +T L  AA + HL+ V+ L+  GA ++  D                   G T 
Sbjct: 39  -TCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAE-----------------GSTC 80

Query: 551 LHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDAT 610
           LHLAA  G+ ++ ++L+ +    ++       TP+  A E   + + KLLL  G+ I+  
Sbjct: 81  LHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIR 140

Query: 611 DDQGQKPIHVAAQNNFPEVAQIFL 634
           D++    +H AA +   ++A+I L
Sbjct: 141 DNEENICLHWAAFSGCVDIAEILL 164

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 58.6 bits (143), Expect = 2e-09
 Identities = 13/65 (20%), Positives = 26/65 (40%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           L+     G +PL IA      + V   L+  + V + ++EG + L  A+ +  +     +
Sbjct: 170 LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQM 229

Query: 74  LTHKA 78
                
Sbjct: 230 SKALQ 234

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  201 bits (514), Expect = 4e-59
 Identities = 62/266 (23%), Positives = 102/266 (38%), Gaps = 42/266 (15%)

Query: 369 ENGYNPLHLACFGGHVT----VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
           E+G + LHLA           V+  +    A L    +   +T LH+A      ++ E L
Sbjct: 6   EDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFL-NFQNNLQQTPLHLAVITNQPEIAEAL 64

Query: 425 LGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLS 484
           LG G +    D  G   +H A   G +  +  L Q      + +                
Sbjct: 65  LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSI--------------- 109

Query: 485 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKS 544
                L++ + NG TCLH+A+ HG+L +VE+L+  GA++NA +                 
Sbjct: 110 -----LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCN-------------- 150

Query: 545 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 604
             GRTALHLA      DL   L+    A ++ +T +  +P  L       ++ + L  L 
Sbjct: 151 --GRTALHLAVDLQNPDLVSLLL-KCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT 207

Query: 605 ASIDATDDQGQKPIHVAAQNNFPEVA 630
                   + +       ++ F E  
Sbjct: 208 LENLQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  175 bits (446), Expect = 6e-50
 Identities = 59/270 (21%), Positives = 87/270 (32%), Gaps = 49/270 (18%)

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRS---SKALNVYSK-KLGVTALHVAAYFGQADTVREL 309
            + G + +HLA  +    +  E+          +  +  L  T LH+A    Q +    L
Sbjct: 5   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64

Query: 310 LSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLL-----NSAGVQVD 364
           L             G     EL    G TPLHLA   G    V +L            + 
Sbjct: 65  LGA-----------GCDP--ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILK 111

Query: 365 AQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
           A    NG+  LHLA   G++ +V LL+S  AD+      NG+T LH+A    +  +V +L
Sbjct: 112 ATN-YNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLL 170

Query: 425 LGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLS 484
           L  GA++N     G              I   L Q                         
Sbjct: 171 LKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT----------------------- 207

Query: 485 RAADLLQSADKNGKTCLHIAATHGHLQMVE 514
              + LQ      +            +  E
Sbjct: 208 --LENLQ-MLPESEDEESYDTESEFTEFTE 234

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  174 bits (444), Expect = 1e-49
 Identities = 50/240 (20%), Positives = 84/240 (35%), Gaps = 43/240 (17%)

Query: 402 DKNGKTCLHIAATHGH----LQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTL 457
            ++G + LH+A  H      ++++  + G  A +N  +      +H A       I   L
Sbjct: 5   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64

Query: 458 LQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 517
           L  G   ++                           D  G T LH+A   G L  V VL 
Sbjct: 65  LGAGCDPEL--------------------------RDFRGNTPLHLACEQGCLASVGVLT 98

Query: 518 GQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 577
                 +             + + + +  G T LHLA+++GY  +   LV    A ++  
Sbjct: 99  QSCTTPH-----------LHSILKATNYNGHTCLHLASIHGYLGIVELLV-SLGADVNAQ 146

Query: 578 TLRK-QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 636
                +T LHLA +     +  LLL  GA ++    QG  P  +        + Q   + 
Sbjct: 147 EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQL 206

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  161 bits (410), Expect = 5e-45
 Identities = 48/270 (17%), Positives = 89/270 (32%), Gaps = 47/270 (17%)

Query: 16  KQTSIGWTPLLIACNRGH----MELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCD 71
           + T  G + L +A         ME++  +  + A ++  +   ++ LHLA      ++ +
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAE 62

Query: 72  ALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV-----HDHAAVIDILTLRKQTPLH 126
           ALL        +   G T LHLA   G       L          +++        T LH
Sbjct: 63  ALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 122

Query: 127 LAAEAGQLQVCKLLLDLGASIDATDDQ-GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATT 185
           LA+  G L + +LL+ LGA ++A +   G+  +H+A     P++  + L+     V   T
Sbjct: 123 LASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD-VNRVT 181

Query: 186 KDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVK 245
             G +                                    P QL        + + L +
Sbjct: 182 YQGYS------------------------------------PYQLTWGRPSTRIQQQLGQ 205

Query: 246 AGASCTDENKTGFTAVHLAAQNGHNQVLEE 275
                               ++   +  E+
Sbjct: 206 LTLENLQMLPESEDEESYDTESEFTEFTED 235

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  158 bits (403), Expect = 5e-44
 Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 12/229 (5%)

Query: 87  GRTALHLAAMNGYADLCRFLVH---DHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 143
           G + LHLA ++    L   ++       A ++     +QTPLHLA    Q ++ + LL  
Sbjct: 8   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 67

Query: 144 GASIDATDDQGQKPIHVAAQNNFPEVAQIFL-----RAHPSLVTATTKDGNTCAHIAAMQ 198
           G   +  D +G  P+H+A +        +           S++ AT  +G+TC H+A++ 
Sbjct: 68  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 127

Query: 199 GSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTG 257
           G +G++E L+     G  ++A+      T L LA +  + ++V +L+K GA        G
Sbjct: 128 GYLGIVELLVS---LGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQG 184

Query: 258 FTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTV 306
           ++   L       ++ +++      N+                   +  
Sbjct: 185 YSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  147 bits (374), Expect = 3e-40
 Identities = 46/200 (23%), Positives = 72/200 (36%), Gaps = 9/200 (4%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           LN Q ++  TPL +A      E+   +L      ++ D  G + LHLA E G L     L
Sbjct: 38  LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVL 97

Query: 74  LTHKA------FINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK-QTPLH 126
                       + + +  G T LHLA+++GY  +   LV    A ++       +T LH
Sbjct: 98  TQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLV-SLGADVNAQEPCNGRTALH 156

Query: 127 LAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTK 186
           LA +     +  LLL  GA ++    QG  P  +        + Q  L            
Sbjct: 157 LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQ-QLGQLTLENLQMLP 215

Query: 187 DGNTCAHIAAMQGSVGVIEE 206
           +                 E+
Sbjct: 216 ESEDEESYDTESEFTEFTED 235

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  132 bits (335), Expect = 6e-35
 Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 56/279 (20%)

Query: 433 ATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQS 492
              + G   +H A  +    +   +++                      +    A  L  
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTMEVIR---------------------QVKGDLAF-LNF 40

Query: 493 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALH 552
            +   +T LH+A      ++ E LLG G +    D                   G T LH
Sbjct: 41  QNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDF-----------------RGNTPLH 83

Query: 553 LAAMNGYADLCRFLV-----HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI 607
           LA   G       L          +++        T LHLA+  G L + +LL+ LGA +
Sbjct: 84  LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV 143

Query: 608 DATDDQ-GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL-IAAGKHCEGMA 665
           +A +   G+  +H+A     P++  + L+     V   T +        +  G+    + 
Sbjct: 144 NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD-VNRVTYQGYSP--YQLTWGRPSTRIQ 200

Query: 666 TELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEV 704
            +L       ++   +  + D  + +      E+E  E 
Sbjct: 201 QQL--GQLTLENLQMLPESEDEESYD-----TESEFTEF 232

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  197 bits (503), Expect = 1e-57
 Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 43/254 (16%)

Query: 381 GGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGAR 440
           G    V+   + + A L    D+ G+T LH+AA +      + LL   A+ N  D  G  
Sbjct: 1   GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT 60

Query: 441 SIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTC 500
            +H A      G+   L++                           A  L +   +G T 
Sbjct: 61  PLHAAVSADAQGVFQILIRNR-------------------------ATDLDARMHDGTTP 95

Query: 501 LHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA 560
           L +AA      M+E L+   A++NA D                  +G++ALH AA     
Sbjct: 96  LILAARLAVEGMLEDLINSHADVNAVDD-----------------LGKSALHWAAAVNNV 138

Query: 561 DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHV 620
           D    L+  + A  D+   R++TPL LAA  G  +  K+LLD  A+ D TD   + P  +
Sbjct: 139 DAAVVLL-KNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI 197

Query: 621 AAQNNFPEVAQIFL 634
           A +    ++ ++  
Sbjct: 198 AQERMHHDIVRLLD 211

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  186 bits (475), Expect = 6e-54
 Identities = 64/286 (22%), Positives = 96/286 (33%), Gaps = 65/286 (22%)

Query: 301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
                + + +             GAS L      +G T LHLAA     +  + LL  A 
Sbjct: 2   DAPAVISDFIYQ-----------GAS-LHNQTDRTGETALHLAARYSRSDAAKRLL-EAS 48

Query: 361 VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
              + Q    G  PLH A       V  +L+   A  L +   +G T L +AA      M
Sbjct: 49  ADANIQD-NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGM 107

Query: 421 VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVG 480
           +E L+   A++NA D  G  ++H AA   +V     LL+ G   D               
Sbjct: 108 LEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD--------------- 152

Query: 481 LLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFI 540
                        +   +T L +AA  G  +  +VLL   A  + TD             
Sbjct: 153 -----------MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDH------------ 189

Query: 541 NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLH 586
                + R    +A    + D+ R L  ++  V           LH
Sbjct: 190 -----MDRLPRDIAQERMHHDIVRLLD-EYNLVR-------SPQLH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  185 bits (473), Expect = 1e-53
 Identities = 58/262 (22%), Positives = 89/262 (33%), Gaps = 47/262 (17%)

Query: 347 GNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGK 406
               V+   +   G  +  QT   G   LHLA           LL  +AD     D  G+
Sbjct: 2   DAPAVISDFI-YQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGR 59

Query: 407 TCLHIAATHGHLQMVEVLLGQGA-EINATDKGGARSIHTAARYGHVGIINTLLQKGEKVD 465
           T LH A +     + ++L+   A +++A    G   +  AAR    G++  L+     V+
Sbjct: 60  TPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN 119

Query: 466 VTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 525
                                       D  GK+ LH AA   ++    VLL  GA  + 
Sbjct: 120 AV--------------------------DDLGKSALHWAAAVNNVDAAVVLLKNGANKDM 153

Query: 526 TDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 585
            +                     T L LAA  G  +  + L+ DH A  DI     + P 
Sbjct: 154 QNNR-----------------EETPLFLAAREGSYETAKVLL-DHFANRDITDHMDRLPR 195

Query: 586 HLAAEAGQLQVCKLLLDLGASI 607
            +A E     + +LL +     
Sbjct: 196 DIAQERMHHDIVRLLDEYNLVR 217

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  178 bits (455), Expect = 3e-51
 Identities = 56/230 (24%), Positives = 94/230 (40%), Gaps = 18/230 (7%)

Query: 234 GGHANVVRVLVKAGASCTDE-NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGV 291
           G    V+   +  GAS  ++ ++TG TA+HLAA+   +   + +  + A +   +  +G 
Sbjct: 1   GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA-DANIQDNMGR 59

Query: 292 TALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENV 351
           T LH A         + L+ +            A+ L       G TPL LAA    E +
Sbjct: 60  TPLHAAVSADAQGVFQILIRN-----------RATDLDA-RMHDGTTPLILAARLAVEGM 107

Query: 352 VRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHI 411
           +  L+ ++   V+A   + G + LH A    +V    +LL   A+     +   +T L +
Sbjct: 108 LEDLI-NSHADVNAVD-DLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFL 164

Query: 412 AATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           AA  G  +  +VLL   A  + TD         A    H  I+  L +  
Sbjct: 165 AAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  174 bits (444), Expect = 9e-50
 Identities = 55/238 (23%), Positives = 88/238 (36%), Gaps = 41/238 (17%)

Query: 288 KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSG 347
           + G TALH+AA + ++D  + LL              A     +    G TPLH A  + 
Sbjct: 23  RTGETALHLAARYSRSDAAKRLLEA-----------SADA--NIQDNMGRTPLHAAVSAD 69

Query: 348 NENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKT 407
            + V ++L+ +    +DA+   +G  PL LA       ++  L++  AD + + D  GK+
Sbjct: 70  AQGVFQILIRNRATDLDARM-HDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKS 127

Query: 408 CLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVT 467
            LH AA   ++    VLL  GA  +  +      +  AAR G       LL      D+T
Sbjct: 128 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDIT 187

Query: 468 TNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 525
                                     D   +    IA    H  +V +L       + 
Sbjct: 188 --------------------------DHMDRLPRDIAQERMHHDIVRLLDEYNLVRSP 219

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  166 bits (424), Expect = 4e-47
 Identities = 47/213 (22%), Positives = 78/213 (36%), Gaps = 17/213 (7%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
           T L LAA    ++  + L++A A    ++  G T +H A       V + +  ++A ++ 
Sbjct: 27  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 86

Query: 286 SK-KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAA 344
           ++   G T L +AA       + +L++             A        + G + LH AA
Sbjct: 87  ARMHDGTTPLILAARLAVEGMLEDLINS-----------HADV--NAVDDLGKSALHWAA 133

Query: 345 YSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKN 404
              N +   +LL   G   D Q       PL LA   G      +LL   A+     D  
Sbjct: 134 AVNNVDAAVVLL-KNGANKDMQN-NREETPLFLAAREGSYETAKVLLDHFAN-RDITDHM 190

Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
            +    IA    H  +V +L       +    G
Sbjct: 191 DRLPRDIAQERMHHDIVRLLDEYNLVRSPQLHG 223

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  155 bits (394), Expect = 6e-43
 Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 3/194 (1%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N+    G T L +A      +    +L   A  ++ D  GR+ LH A       V   L+
Sbjct: 19  NQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 78

Query: 75  THKAF-INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
            ++A  ++++   G T L LAA      +   L+ +  A ++ +    ++ LH AA    
Sbjct: 79  RNRATDLDARMHDGTTPLILAARLAVEGMLEDLI-NSHADVNAVDDLGKSALHWAAAVNN 137

Query: 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAH 193
           +    +LL  GA+ D  +++ + P+ +AA+    E A++ L  H +    T         
Sbjct: 138 VDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLL-DHFANRDITDHMDRLPRD 196

Query: 194 IAAMQGSVGVIEEL 207
           IA  +    ++  L
Sbjct: 197 IAQERMHHDIVRLL 210

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  151 bits (385), Expect = 8e-42
 Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 7/219 (3%)

Query: 32  GHMELVNTMLNNHARV-DVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTA 90
               +++  +   A + +  D+ G +ALHLAA +        LL   A  N +  +GRT 
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 61

Query: 91  LHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDAT 150
           LH A       + + L+ + A  +D       TPL LAA      + + L++  A ++A 
Sbjct: 62  LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV 121

Query: 151 DDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKF 210
           DD G+  +H AA  N  + A + L  + +          T   +AA +GS    + L+  
Sbjct: 122 DDLGKSALHWAAAVNNVDAAVVLL-KNGANKDMQNNREETPLFLAAREGSYETAKVLLD- 179

Query: 211 DRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLVKAGA 248
                     +   +  P  +A E  H ++VR+L +   
Sbjct: 180 --HFANRDITDH-MDRLPRDIAQERMHHDIVRLLDEYNL 215

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  121 bits (306), Expect = 3e-31
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 1/134 (0%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           L+ +   G TPL++A       ++  ++N+HA V+  D  G+SALH AA    +     L
Sbjct: 85  LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 144

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           L + A  + ++    T L LAA  G  +  + L+ DH A  DI     + P  +A E   
Sbjct: 145 LKNGANKDMQNNREETPLFLAAREGSYETAKVLL-DHFANRDITDHMDRLPRDIAQERMH 203

Query: 134 LQVCKLLLDLGASI 147
             + +LL +     
Sbjct: 204 HDIVRLLDEYNLVR 217

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  194 bits (495), Expect = 2e-56
 Identities = 61/266 (22%), Positives = 95/266 (35%), Gaps = 50/266 (18%)

Query: 374 PLHLACFGGHV-TVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 432
           PLH AC       V  LL S+ + L    D++G+  LH + +    ++   LL +   +N
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLL-LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 63

Query: 433 A---TDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADL 489
                D  G    H A   G++ ++ +L  +  K D+                       
Sbjct: 64  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLN---------------------- 101

Query: 490 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRT 549
                  G TCLH+A      ++ + L+  GA +   DK                   + 
Sbjct: 102 --KITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKF-----------------NQI 142

Query: 550 ALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD-LGASID 608
            LH AA  G   L   L     + ++    +  TPL  A   G      LL++  GA  D
Sbjct: 143 PLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202

Query: 609 ATDDQGQKPIHVAAQNNFPEVAQIFL 634
             D++G K   VA       V + FL
Sbjct: 203 LVDNKGAKAEDVALNEQ---VKKFFL 225

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  189 bits (483), Expect = 6e-55
 Identities = 61/278 (21%), Positives = 91/278 (32%), Gaps = 59/278 (21%)

Query: 289 LGVTALHVAAYFGQADTVRELL-SHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSG 347
           +    LH A    +   V+ELL S             +        + G  PLH +    
Sbjct: 1   MSNYPLHQACMENEFFKVQELLHSK-----------PSLL--LQKDQDGRIPLHWSVSFQ 47

Query: 348 NENVVRLLL-NSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADL-LQSADKNG 405
              +   LL     V +D    ++G+ P H+AC  G++ VV  L  R     L      G
Sbjct: 48  AHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQG 107

Query: 406 KTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVD 465
            TCLH+A      ++ + L+  GA +   DK     +H AA  G + +I  L   G    
Sbjct: 108 VTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG---- 163

Query: 466 VTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ-GAEIN 524
                                +  +   DK G T L  A   GH     +L+ + GAE +
Sbjct: 164 --------------------KSA-VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202

Query: 525 ATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADL 562
             D                   G  A  +A        
Sbjct: 203 LVDN-----------------KGAKAEDVALNEQVKKF 223

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  166 bits (424), Expect = 5e-47
 Identities = 56/260 (21%), Positives = 91/260 (35%), Gaps = 42/260 (16%)

Query: 20  IGWTPLLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKA 78
           +   PL  AC       V  +L++  + +   DQ+GR  LH +      ++   LL+   
Sbjct: 1   MSNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKME 60

Query: 79  FINSKSRV---GRTALHLAAMNGYADLCRFLV-HDHAAVIDILTLRKQTPLHLAAEAGQL 134
            +N        G T  H+A   G  ++ + L        ++ +T +  T LHLA      
Sbjct: 61  NVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWF 120

Query: 135 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHI 194
           +V + L++ GAS+   D   Q P+H AA     ++ ++      S V    K G      
Sbjct: 121 EVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGW----- 175

Query: 195 AAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLV-KAGASCTDE 253
                                          TPL  A   GH +   +LV K GA     
Sbjct: 176 -------------------------------TPLFHALAEGHGDAAVLLVEKYGAEYDLV 204

Query: 254 NKTGFTAVHLAAQNGHNQVL 273
           +  G  A  +A      +  
Sbjct: 205 DNKGAKAEDVALNEQVKKFF 224

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  153 bits (390), Expect = 2e-42
 Identities = 56/240 (23%), Positives = 88/240 (36%), Gaps = 20/240 (8%)

Query: 122 QTPLHLAAEAGQLQ-VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR--AHP 178
             PLH A    +   V +LL    + +   D  G+ P+H +      E+    L    + 
Sbjct: 3   NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 62

Query: 179 SLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHAN 238
           +L       G T  HIA   G++ V++ L        ++        T L LA       
Sbjct: 63  NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN-QGVTCLHLAVGKKWFE 121

Query: 239 VVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVA 297
           V + L++ GAS   ++K     +H AA  G  +++E +       V  + K G T L  A
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHA 181

Query: 298 AYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLN 357
              G  D    L+             GA +  +L    G     +A    NE V +  LN
Sbjct: 182 LAEGHGDAAVLLVEKY----------GAEY--DLVDNKGAKAEDVAL---NEQVKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  151 bits (384), Expect = 1e-41
 Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 7/193 (3%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARV---DVFDQEGRSALHLAAEHGYLKVCD 71
            ++   G  PL  + +    E+ + +L+    V   D  D  G +  H+A   G L+V  
Sbjct: 30  LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVK 89

Query: 72  ALLTH--KAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA 129
           +L     K  +N  +  G T LHLA    + ++ +FL+ ++ A + I     Q PLH AA
Sbjct: 90  SLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLI-ENGASVRIKDKFNQIPLHRAA 148

Query: 130 EAGQLQVCKLLLDLGAS-IDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDG 188
             G L++ +LL  LG S ++  D QG  P+  A      + A + +  + +        G
Sbjct: 149 SVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKG 208

Query: 189 NTCAHIAAMQGSV 201
                +A  +   
Sbjct: 209 AKAEDVALNEQVK 221

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  141 bits (359), Expect = 2e-38
 Identities = 49/235 (20%), Positives = 80/235 (34%), Gaps = 42/235 (17%)

Query: 443 HTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLH 502
           H A                                V  LL S+ + L    D++G+  LH
Sbjct: 7   HQACMENEFFK------------------------VQELLHSKPSLL-LQKDQDGRIPLH 41

Query: 503 IAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADL 562
            + +    ++   LL +   +N  D                   G T  H+A   G  ++
Sbjct: 42  WSVSFQAHEITSFLLSKMENVNLDDY--------------PDDSGWTPFHIACSVGNLEV 87

Query: 563 CRFLV-HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 621
            + L        ++ +T +  T LHLA      +V + L++ GAS+   D   Q P+H A
Sbjct: 88  VKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRA 147

Query: 622 AQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGAD 676
           A     ++ ++      S V    K+      L  A     G A  LL    GA+
Sbjct: 148 ASVGSLKLIELLCGLGKSAVNWQDKQGWTP--LFHALAEGHGDAAVLLVEKYGAE 200

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  137 bits (347), Expect = 1e-36
 Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 6/165 (3%)

Query: 13  ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDV--FDQEGRSALHLAAEHGYLKVC 70
             +     GWTP  IAC+ G++E+V ++ +   + D+     +G + LHLA    + +V 
Sbjct: 64  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 123

Query: 71  DALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE 130
             L+ + A +  K +  +  LH AA  G   L   L     + ++    +  TPL  A  
Sbjct: 124 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 183

Query: 131 AGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 174
            G      LL++  GA  D  D++G K   VA       V + FL
Sbjct: 184 EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ---VKKFFL 225

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 82.1 bits (204), Expect = 1e-17
 Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 3/92 (3%)

Query: 546 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA 605
           +    LH A M       + L+H   +++       + PLH +      ++   LL    
Sbjct: 1   MSNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKME 60

Query: 606 SI---DATDDQGQKPIHVAAQNNFPEVAQIFL 634
           ++   D  DD G  P H+A      EV +   
Sbjct: 61  NVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY 92

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  178 bits (454), Expect = 8e-52
 Identities = 38/194 (19%), Positives = 69/194 (35%), Gaps = 29/194 (14%)

Query: 335 SGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRA 394
           +    +H  A  G    +   +      ++    E G+ PL  A   G + VV  LL   
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRI-EQENVINHTD-EEGFTPLMWAAAHGQIAVVEFLLQNG 59

Query: 395 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGII 454
           AD  Q   K  ++ L +A + G+  +V++LL  G ++N  D  G   +  A    HV  +
Sbjct: 60  ADP-QLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCV 118

Query: 455 NTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE 514
             LL+ G    +                             +G   + +A   G+  + +
Sbjct: 119 KMLLESGADPTI--------------------------ETDSGYNSMDLAVALGYRSVQQ 152

Query: 515 VLLGQGAEINATDK 528
           V+     ++    K
Sbjct: 153 VIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  162 bits (414), Expect = 2e-46
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 44/209 (21%)

Query: 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
                +H  A  G +  +   + Q   IN TD+ G   +  AA +G + ++  LLQ G  
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 464 VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEI 523
             +                            K  ++ L +A + G+  +V++LL  G ++
Sbjct: 62  PQL--------------------------LGKGRESALSLACSKGYTDIVKMLLDCGVDV 95

Query: 524 NATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQT 583
           N  D                   G T L  A    +    + L+ +  A   I T     
Sbjct: 96  NEYDWN-----------------GGTPLLYAVHGNHVKCVKMLL-ESGADPTIETDSGYN 137

Query: 584 PLHLAAEAGQLQVCKLLLDLGASIDATDD 612
            + LA   G   V +++      +     
Sbjct: 138 SMDLAVALGYRSVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  161 bits (410), Expect = 6e-46
 Identities = 42/180 (23%), Positives = 63/180 (35%), Gaps = 16/180 (8%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
              ++H  A  G+   +   +                       E G TPL  AA  G  
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQ-----------ENVI--NHTDEEGFTPLMWAAAHGQI 49

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
            VV  LL   G        +   + L LAC  G+  +V +LL    D+    D NG T L
Sbjct: 50  AVVEFLL-QNGADPQLLG-KGRESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPL 106

Query: 410 HIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
             A    H++ V++LL  GA+       G  S+  A   G+  +   +     K+     
Sbjct: 107 LYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  157 bits (400), Expect = 2e-44
 Identities = 42/198 (21%), Positives = 67/198 (33%), Gaps = 44/198 (22%)

Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 429
                +H     G +  +   + +   +    D+ G T L  AA HG + +VE LL  GA
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA 60

Query: 430 EINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADL 489
           +     KG   ++  A   G+  I+  LL  G  V+                        
Sbjct: 61  DPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE----------------------- 97

Query: 490 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRT 549
               D NG T L  A    H++ V++LL  GA+                        G  
Sbjct: 98  ---YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETD-----------------SGYN 137

Query: 550 ALHLAAMNGYADLCRFLV 567
           ++ LA   GY  + + + 
Sbjct: 138 SMDLAVALGYRSVQQVIE 155

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  152 bits (387), Expect = 8e-43
 Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 2/167 (1%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
               +     +G M  + T +     ++  D+EG + L  AA HG + V + LL + A  
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP 62

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
               +   +AL LA   GY D+ + L+ D    ++       TPL  A     ++  K+L
Sbjct: 63  QLLGKGRESALSLACSKGYTDIVKMLL-DCGVDVNEYDWNGGTPLLYAVHGNHVKCVKML 121

Query: 141 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKD 187
           L+ GA      D G   + +A    +  V Q+ + +H   +    K+
Sbjct: 122 LESGADPTIETDSGYNSMDLAVALGYRSVQQV-IESHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  135 bits (342), Expect = 9e-37
 Identities = 44/250 (17%), Positives = 71/250 (28%), Gaps = 85/250 (34%)

Query: 187 DGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKA 246
             +   H  A Q                                    G    +   ++ 
Sbjct: 2   ANSLSVHQLAAQ------------------------------------GEMLYLATRIEQ 25

Query: 247 GASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTV 306
                  ++ GFT +  AA +G                                     V
Sbjct: 26  ENVINHTDEEGFTPLMWAAAHGQ---------------------------------IAVV 52

Query: 307 RELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQ 366
             LL +           GA    +L  +   + L LA   G  ++V++LL   GV V+  
Sbjct: 53  EFLLQN-----------GADP--QLLGKGRESALSLACSKGYTDIVKMLL-DCGVDVNEY 98

Query: 367 TQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLG 426
              NG  PL  A  G HV  V +LL   AD       +G   + +A   G+  + +V+  
Sbjct: 99  D-WNGGTPLLYAVHGNHVKCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQVIES 156

Query: 427 QGAEINATDK 436
              ++    K
Sbjct: 157 HLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  132 bits (335), Expect = 9e-36
 Identities = 38/195 (19%), Positives = 64/195 (32%), Gaps = 38/195 (19%)

Query: 54  GRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV 113
              ++H  A  G +      +  +  IN     G T L  AA +G   +  FL+  + A 
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLL-QNGAD 61

Query: 114 IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 173
             +L   +++ L LA   G   + K+LLD G  ++  D  G  P+  A   N  +  +  
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVK-M 120

Query: 174 LRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAE 233
           L    +  T  T  G                                       + LA  
Sbjct: 121 LLESGADPTIETDSGYN------------------------------------SMDLAVA 144

Query: 234 GGHANVVRVLVKAGA 248
            G+ +V +V+     
Sbjct: 145 LGYRSVQQVIESHLL 159

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  126 bits (320), Expect = 8e-34
 Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 1/139 (0%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N     G+TPL+ A   G + +V  +L N A   +  +   SAL LA   GY  +   L
Sbjct: 29  INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 88

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           L     +N     G T L  A    +    + L+ +  A   I T      + LA   G 
Sbjct: 89  LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLL-ESGADPTIETDSGYNSMDLAVALGY 147

Query: 134 LQVCKLLLDLGASIDATDD 152
             V +++      +     
Sbjct: 148 RSVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  125 bits (317), Expect = 2e-33
 Identities = 38/188 (20%), Positives = 65/188 (34%), Gaps = 38/188 (20%)

Query: 87  GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146
              ++H  A  G        + +   VI+       TPL  AA  GQ+ V + LL  GA 
Sbjct: 3   NSLSVHQLAAQGEMLYLATRI-EQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 147 IDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEE 206
                   +  + +A    + ++ ++ L      V     +G T                
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLL-DCGVDVNEYDWNGGT---------------- 104

Query: 207 LMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQ 266
                               PL  A  G H   V++L+++GA  T E  +G+ ++ LA  
Sbjct: 105 --------------------PLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVA 144

Query: 267 NGHNQVLE 274
            G+  V +
Sbjct: 145 LGYRSVQQ 152

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  124 bits (315), Expect = 4e-33
 Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 39/192 (20%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
              +H  A  G++      ++    I+ TD++G  P+  AA +    V +  L  + +  
Sbjct: 4   SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLL-QNGADP 62

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
               K   +                                     L LA   G+ ++V+
Sbjct: 63  QLLGKGRES------------------------------------ALSLACSKGYTDIVK 86

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYF 300
           +L+  G    + +  G T +  A    H + ++ +  S A +   +   G  ++ +A   
Sbjct: 87  MLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA-DPTIETDSGYNSMDLAVAL 145

Query: 301 GQADTVRELLSH 312
           G     + + SH
Sbjct: 146 GYRSVQQVIESH 157

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  124 bits (313), Expect = 9e-33
 Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 22/181 (12%)

Query: 496 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAA 555
                +H  A  G +  +   + Q   IN TD+                  G T L  AA
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEE-----------------GFTPLMWAA 44

Query: 556 MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQ 615
            +G   +  FL+  + A   +L   +++ L LA   G   + K+LLD G  ++  D  G 
Sbjct: 45  AHGQIAVVEFLL-QNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGG 103

Query: 616 KPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGA 675
            P+  A   N  +  +  L    +  T  T     +  +  A         +++  +   
Sbjct: 104 TPLLYAVHGNHVKCVK-MLLESGADPTIETDSGYNS--MDLAVALGYRSVQQVI-ESHLL 159

Query: 676 D 676
            
Sbjct: 160 K 160

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  178 bits (453), Expect = 5e-51
 Identities = 42/264 (15%), Positives = 78/264 (29%), Gaps = 53/264 (20%)

Query: 333 SESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLS 392
            + G   +  A Y+        L       +   T +            G   ++     
Sbjct: 9   VKPGQVKVFRALYTFEPRTPDELY-IEEGDIIYIT-DMSDTNWWKGTSKGRTGLI----- 61

Query: 393 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452
             ++ +    ++    LH AA  G+L  +   L     +N  DK G+ +++ A   GH  
Sbjct: 62  -PSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKD 120

Query: 453 IINTLL-QKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ 511
           I+  L  Q   +++                            +K G T LH AA  G+  
Sbjct: 121 IVEMLFTQPNIELNQQ--------------------------NKLGDTALHAAAWKGYAD 154

Query: 512 MVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHA 571
           +V++LL +GA  +  +                    + A  +A     A L +       
Sbjct: 155 IVQLLLAKGARTDLRNIE-----------------KKLAFDMATNAACASLLKKKQ-GTD 196

Query: 572 AVIDILTLRKQTPLHLAAEAGQLQ 595
           AV  +           +       
Sbjct: 197 AVRTLSNAEDYLDDEDSDLEHHHH 220

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  173 bits (441), Expect = 2e-49
 Identities = 50/275 (18%), Positives = 84/275 (30%), Gaps = 65/275 (23%)

Query: 288 KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSG 347
           K G   +  A Y  +  T  EL        + D            ++   T        G
Sbjct: 10  KPGQVKVFRALYTFEPRTPDELYIE-----EGDI--------IYITDMSDTNWWKGTSKG 56

Query: 348 NENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKT 407
              ++          V  Q  E+  NPLH A   G+++ +   L     +    DK G T
Sbjct: 57  RTGLIP------SNYVAEQA-ESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGST 108

Query: 408 CLHIAATHGHLQMVEVLLGQ-GAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDV 466
            L+ A   GH  +VE+L  Q   E+N  +K G  ++H AA  G+  I+  LL KG + D+
Sbjct: 109 ALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDL 168

Query: 467 TTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT 526
                                      +   K    +A       +++   G  A    +
Sbjct: 169 R--------------------------NIEKKLAFDMATNAACASLLKKKQGTDAVRTLS 202

Query: 527 DKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD 561
           +                          + +  +  
Sbjct: 203 NAE-----------------DYLDDEDSDLEHHHH 220

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  172 bits (438), Expect = 6e-49
 Identities = 46/260 (17%), Positives = 80/260 (30%), Gaps = 51/260 (19%)

Query: 366 QTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 425
           +  + G   +  A +         L     D +        T      + G   ++    
Sbjct: 7   KPVKPGQVKVFRALYTFEPRTPDELYIEEGD-IIYITDMSDTNWWKGTSKGRTGLIP--- 62

Query: 426 GQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSR 485
                +    +     +H AA+ G++  +   L     V+                    
Sbjct: 63  --SNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG------------------- 101

Query: 486 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ-GAEINATDKVCDALLTHKAFINSKS 544
                   DK G T L+ A   GH  +VE+L  Q   E+N  +K                
Sbjct: 102 -------LDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNK---------------- 138

Query: 545 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 604
            +G TALH AA  GYAD+ + L+    A  D+  + K+    +A  A    + K      
Sbjct: 139 -LGDTALHAAAWKGYADIVQLLL-AKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTD 196

Query: 605 ASIDATDDQGQKPIHVAAQN 624
           A    ++ +       +   
Sbjct: 197 AVRTLSNAEDYLDDEDSDLE 216

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  167 bits (424), Expect = 4e-47
 Identities = 46/258 (17%), Positives = 79/258 (30%), Gaps = 46/258 (17%)

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHV 313
            K G   V  A      +  +E+   +   +Y   +  T        G+   +       
Sbjct: 9   VKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAE 68

Query: 314 PGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYN 373
                              +ES   PLH AA  GN + +R  L    V V+    + G  
Sbjct: 69  ------------------QAESIDNPLHEAAKRGNLSWLRECL-DNRVGVNGLD-KAGST 108

Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
            L+ AC GGH  +V +L ++    L   +K G T LH AA  G+  +V++LL +GA  + 
Sbjct: 109 ALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDL 168

Query: 434 TDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSA 493
            +     +   A       ++           +                          +
Sbjct: 169 RNIEKKLAFDMATNAACASLLKKKQGTDAVRTL--------------------------S 202

Query: 494 DKNGKTCLHIAATHGHLQ 511
           +         +    H  
Sbjct: 203 NAEDYLDDEDSDLEHHHH 220

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  165 bits (421), Expect = 9e-47
 Identities = 41/250 (16%), Positives = 72/250 (28%), Gaps = 49/250 (19%)

Query: 398 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTL 457
                K G+  +  A      +  + L  +  +I         +       G  G+I + 
Sbjct: 5   PPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSN 64

Query: 458 LQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 517
                                                ++    LH AA  G+L  +   L
Sbjct: 65  YVAE-------------------------------QAESIDNPLHEAAKRGNLSWLRECL 93

Query: 518 GQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 577
                +N  DK                  G TAL+ A   G+ D+   L       ++  
Sbjct: 94  DNRVGVNGLDK-----------------AGSTALYWACHGGHKDIVEMLFTQPNIELNQQ 136

Query: 578 TLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 637
                T LH AA  G   + +LLL  GA  D  + + +    +A       + +   +  
Sbjct: 137 NKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLK-KKQGT 195

Query: 638 PSLVTATTKE 647
            ++ T +  E
Sbjct: 196 DAVRTLSNAE 205

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  158 bits (403), Expect = 2e-44
 Identities = 32/261 (12%), Positives = 66/261 (25%), Gaps = 44/261 (16%)

Query: 10  ISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKV 69
           +SK   K    G   +  A         + +      +        +        G    
Sbjct: 1   MSKPPPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRT-- 58

Query: 70  CDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA 129
               L    ++  ++      LH AA  G     R  + D+   ++ L     T L+ A 
Sbjct: 59  ---GLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECL-DNRVGVNGLDKAGSTALYWAC 114

Query: 130 EAGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDG 188
             G   + ++L       ++  +  G   +H AA   + ++ Q+ L            + 
Sbjct: 115 HGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGAR-TDLRNIEK 173

Query: 189 NTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGA 248
                                                    +A     A++++      A
Sbjct: 174 K------------------------------------LAFDMATNAACASLLKKKQGTDA 197

Query: 249 SCTDENKTGFTAVHLAAQNGH 269
             T  N   +     +    H
Sbjct: 198 VRTLSNAEDYLDDEDSDLEHH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 83.1 bits (206), Expect = 5e-18
 Identities = 17/88 (19%), Positives = 33/88 (37%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           LN+Q  +G T L  A  +G+ ++V  +L   AR D+ + E + A  +A       +    
Sbjct: 133 LNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKK 192

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYAD 101
               A     +         + +  +  
Sbjct: 193 QGTDAVRTLSNAEDYLDDEDSDLEHHHH 220

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  178 bits (453), Expect = 1e-50
 Identities = 52/307 (16%), Positives = 78/307 (25%), Gaps = 71/307 (23%)

Query: 257 GFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGT 316
           G     + ++                       G     +    G + +           
Sbjct: 1   GEVNKIIGSRTAGE-------------------GAMEYLIEWKDGHSPSWVPSSYI---- 37

Query: 317 VKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLH 376
                                TP   AA   +E  +  LL      VDA   ENG   L 
Sbjct: 38  ------------AADVVSEYETPWWTAARKADEQALSQLL--EDRDVDAVD-ENGRTALL 82

Query: 377 LACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK 436
                G    V LL    ADL     + G T LH+AA +   ++VE L+  GA+I   D+
Sbjct: 83  FVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE 142

Query: 437 GGARSIHTAARYGHVGIINTLLQKGEKV---DVTTNNLAC--GHVTVVGLLLSRAADLLQ 491
            G  ++  A            +Q G ++    V          +  V  ++         
Sbjct: 143 RGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEK------- 195

Query: 492 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTAL 551
                GK   ++           V     AE  A D                       L
Sbjct: 196 --RGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDY-------------------EDGL 234

Query: 552 HLAAMNG 558
             A    
Sbjct: 235 EYAVAES 241

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  174 bits (443), Expect = 2e-49
 Identities = 45/276 (16%), Positives = 79/276 (28%), Gaps = 42/276 (15%)

Query: 325 ASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHV 384
              +G   +  G     +    G+              V +        P   A      
Sbjct: 4   NKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSS-YIAADVVS----EYETPWWTAARKADE 58

Query: 385 TVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD-KGGARSIH 443
             +  LL      + + D+NG+T L   A  G  + V +L   GA+++  D +GG  ++H
Sbjct: 59  QALSQLLEDRD--VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALH 116

Query: 444 TAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHI 503
            AA Y    ++  L++ G  ++V                           D+ G T L +
Sbjct: 117 MAAGYVRPEVVEALVELGADIEV--------------------------EDERGLTALEL 150

Query: 504 AATHGHLQMVEVLLGQGAEINATDKV-----CDALLTHKAFINSKSRVGRTALHLAAMNG 558
           A            +  G  I     +               I  K   G+   +L     
Sbjct: 151 AREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKD 210

Query: 559 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 594
             D        H A  + +    +  L  A     +
Sbjct: 211 GGDCEWVKG-VHVA--EDVAKDYEDGLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  157 bits (399), Expect = 2e-43
 Identities = 49/259 (18%), Positives = 80/259 (30%), Gaps = 29/259 (11%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           ++    G    LI    GH           A  DV   E  +    AA     +    LL
Sbjct: 9   SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAA--DV-VSEYETPWWTAARKADEQALSQLL 65

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR-KQTPLHLAAEAGQ 133
                +++    GRTAL   A  G     R L  +  A +D   +R   T LH+AA   +
Sbjct: 66  -EDRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAGYVR 123

Query: 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR--AHPSLVTATTKDGNTC 191
            +V + L++LGA I+  D++G   + +A +          ++      L      +    
Sbjct: 124 PEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGL------EKVIN 177

Query: 192 AHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCT 251
                +     V E + K    G               L       +   V     A   
Sbjct: 178 VLEGQVFEYAEVDEIVEK-RGKGK----------DVEYLVRWKDGGDCEWVKGVHVA--- 223

Query: 252 DEN-KTGFTAVHLAAQNGH 269
           ++  K     +  A     
Sbjct: 224 EDVAKDYEDGLEYAVAESV 242

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  134 bits (339), Expect = 2e-35
 Identities = 43/344 (12%), Positives = 84/344 (24%), Gaps = 103/344 (29%)

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
            +K   +  +  G     +   +G++       +  A V+       +TP   AA     
Sbjct: 3   VNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS----EYETPWWTAARKADE 58

Query: 135 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHI 194
           Q    LL+    +DA D+ G+  +   A     +  ++                      
Sbjct: 59  QALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-------------------- 97

Query: 195 AAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDEN 254
                  G             +  R+     T L +AA      VV  LV+ GA    E+
Sbjct: 98  -----EAGAD-----------LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVED 141

Query: 255 KTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVP 314
           + G TA+ LA +                                           +    
Sbjct: 142 ERGLTALELAREILKT---------------------------------TPKGNPMQF-- 166

Query: 315 GTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNP 374
                    G            +  +          V  ++            +  G + 
Sbjct: 167 ---------GRRI-----GLEKVINVLEGQVFEYAEVDEIVE----------KRGKGKDV 202

Query: 375 LHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL 418
            +L  +        +     A+ +    K+ +  L  A     +
Sbjct: 203 EYLVRWKDGGDCEWVKGVHVAEDV---AKDYEDGLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  125 bits (316), Expect = 2e-32
 Identities = 43/205 (20%), Positives = 70/205 (34%), Gaps = 28/205 (13%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
             TP   A  +   + ++ +L     VD  D+ GR+AL   A  G  K    L    A +
Sbjct: 45  YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL 103

Query: 81  NSK-SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
           + +  R G TALH+AA     ++   LV +  A I++   R  T L LA E  +      
Sbjct: 104 DHRDMRGGLTALHMAAGYVRPEVVEALV-ELGADIEVEDERGLTALELAREILKTTPKGN 162

Query: 140 LLDLGASIDATDDQ----------------------GQKPIHVAAQNNFPEVAQIFLRAH 177
            +  G  I                            G+   ++    +  +   +    H
Sbjct: 163 PMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKG-VH 221

Query: 178 PSLVTATTKDGNTCAHIAAMQGSVG 202
            +   A  KD       A  +  +G
Sbjct: 222 VAEDVA--KDYEDGLEYAVAESVIG 244

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  123 bits (312), Expect = 8e-32
 Identities = 43/228 (18%), Positives = 75/228 (32%), Gaps = 32/228 (14%)

Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            GH          AAD+        +T    AA     Q +  LL +  +++A D+    
Sbjct: 25  DGHSPSWVPSSYIAADV----VSEYETPWWTAARKADEQALSQLL-EDRDVDAVDEN--- 76

Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR-KQTPLHLAAEA 591
                         GRTAL   A  G     R L  +  A +D   +R   T LH+AA  
Sbjct: 77  --------------GRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAGY 121

Query: 592 GQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERA 651
            + +V + L++LGA I+  D++G   + +A +          ++            ++  
Sbjct: 122 VRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFG-----RRIGLEKVI 176

Query: 652 KDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIEN 699
             L         +   +     G D          +   +   V   +
Sbjct: 177 NVLEGQVFEYAEVDEIVEKRGKGKD---VEYLVRWKDGGDCEWVKGVH 221

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 78.4 bits (194), Expect = 3e-16
 Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 8/142 (5%)

Query: 535 THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 594
            +K   +  +  G     +   +G++       +  A V+       +TP   AA     
Sbjct: 3   VNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS----EYETPWWTAARKADE 58

Query: 595 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL 654
           Q    LL+    +DA D+ G+  +   A     +  ++      + +             
Sbjct: 59  QALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALH 116

Query: 655 IAAGKHCEGMATELLALAAGAD 676
           +AAG     +  E L +  GAD
Sbjct: 117 MAAGYVRPEVV-EAL-VELGAD 136

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 48.0 bits (115), Expect = 5e-06
 Identities = 7/88 (7%), Positives = 18/88 (20%), Gaps = 23/88 (26%)

Query: 547 GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
           G     + +                               +  + G          + A 
Sbjct: 1   GEVNKIIGSRTAG--------------------EGAMEYLIEWKDGHSPSWVPSSYIAAD 40

Query: 607 IDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           + +   + + P   AA+    +     L
Sbjct: 41  VVS---EYETPWWTAARKADEQALSQLL 65

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  174 bits (445), Expect = 1e-50
 Identities = 40/193 (20%), Positives = 72/193 (37%), Gaps = 28/193 (14%)

Query: 336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAA 395
               +H  A  G  + ++  L      V+    E G+ PL  A   G +  V  LL   A
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD-ERGFTPLIWASAFGEIETVRFLLEWGA 60

Query: 396 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIIN 455
           D      K  ++ L +A+T G+  +V +LL +  +IN  D  G   +  A R  HV  + 
Sbjct: 61  D-PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVE 119

Query: 456 TLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEV 515
            LL +G  +                               +G T + +A   G+ ++ +V
Sbjct: 120 ALLARGADLTT--------------------------EADSGYTPMDLAVALGYRKVQQV 153

Query: 516 LLGQGAEINATDK 528
           +     ++  ++ 
Sbjct: 154 IENHILKLFQSNL 166

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  163 bits (416), Expect = 1e-46
 Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 15/181 (8%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
              ++H  A  G+ D ++E L             G + + +   E G TPL  A+  G  
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRK-----------GDNLVNK-PDERGFTPLIWASAFGEI 49

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
             VR LL   G        +   + L LA  GG+  +VGLLL R  D +   D NG T L
Sbjct: 50  ETVRFLL-EWGADPHILA-KERESALSLASTGGYTDIVGLLLERDVD-INIYDWNGGTPL 106

Query: 410 HIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
             A    H++ VE LL +GA++      G   +  A   G+  +   +     K+  +  
Sbjct: 107 LYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNL 166

Query: 470 N 470
            
Sbjct: 167 V 167

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  161 bits (410), Expect = 8e-46
 Identities = 43/214 (20%), Positives = 76/214 (35%), Gaps = 44/214 (20%)

Query: 371 GYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAE 430
               +H     G +  +   L +  +L+   D+ G T L  A+  G ++ V  LL  GA+
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 431 INATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLL 490
            +   K    ++  A+  G+  I+  LL++   +++                        
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINI------------------------ 97

Query: 491 QSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTA 550
              D NG T L  A    H++ VE LL +GA++                       G T 
Sbjct: 98  --YDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD-----------------SGYTP 138

Query: 551 LHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTP 584
           + LA   GY  + + +  +H   +    L    P
Sbjct: 139 MDLAVALGYRKVQQVIE-NHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  159 bits (406), Expect = 3e-45
 Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 17/183 (9%)

Query: 257 GFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSHVPG 315
              ++H  A  G    L+E        V    + G T L  A+ FG+ +TVR LL     
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW--- 58

Query: 316 TVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPL 375
                   GA     + ++   + L LA+  G  ++V LLL    V ++     NG  PL
Sbjct: 59  --------GADP--HILAKERESALSLASTGGYTDIVGLLL-ERDVDINIYDW-NGGTPL 106

Query: 376 HLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 435
             A  G HV  V  LL+R AD L +   +G T + +A   G+ ++ +V+     ++  ++
Sbjct: 107 LYAVRGNHVKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSN 165

Query: 436 KGG 438
              
Sbjct: 166 LVP 168

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  152 bits (387), Expect = 1e-42
 Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 3/171 (1%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHA-RVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAF 79
               +     +G ++ +   L      V+  D+ G + L  A+  G ++    LL   A 
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 80  INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
            +  ++   +AL LA+  GY D+   L+ +    I+I      TPL  A     ++  + 
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLL-ERDVDINIYDWNGGTPLLYAVRGNHVKCVEA 120

Query: 140 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNT 190
           LL  GA +    D G  P+ +A    + +V Q  +  H   +  +      
Sbjct: 121 LLARGADLTTEADSGYTPMDLAVALGYRKVQQ-VIENHILKLFQSNLVPAD 170

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  143 bits (364), Expect = 1e-39
 Identities = 46/198 (23%), Positives = 73/198 (36%), Gaps = 43/198 (21%)

Query: 437 GGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKN 496
           G + SIH  A  G +  +   L+KG                          +L+   D+ 
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKG-------------------------DNLVNKPDER 35

Query: 497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM 556
           G T L  A+  G ++ V  LL  GA+ +   K                    +AL LA+ 
Sbjct: 36  GFTPLIWASAFGEIETVRFLLEWGADPHILAKE-----------------RESALSLAST 78

Query: 557 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK 616
            GY D+   L+ +    I+I      TPL  A     ++  + LL  GA +    D G  
Sbjct: 79  GGYTDIVGLLL-ERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYT 137

Query: 617 PIHVAAQNNFPEVAQIFL 634
           P+ +A    + +V Q+  
Sbjct: 138 PMDLAVALGYRKVQQVIE 155

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  129 bits (328), Expect = 8e-35
 Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 1/143 (0%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           NK    G+TPL+ A   G +E V  +L   A   +  +E  SAL LA+  GY  +   LL
Sbjct: 30  NKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLL 89

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
                IN     G T L  A    +      L+    A +        TP+ LA   G  
Sbjct: 90  ERDVDINIYDWNGGTPLLYAVRGNHVKCVEALL-ARGADLTTEADSGYTPMDLAVALGYR 148

Query: 135 QVCKLLLDLGASIDATDDQGQKP 157
           +V +++ +    +  ++     P
Sbjct: 149 KVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  125 bits (318), Expect = 2e-33
 Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 37/188 (19%)

Query: 87  GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146
              ++H  A  G  D  +  +     +++    R  TPL  A+  G+++  + LL+ GA 
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 147 IDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEE 206
                 + +  + +A+   + ++  + L      +     +G                  
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVD-INIYDWNGG----------------- 103

Query: 207 LMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQ 266
                              TPL  A  G H   V  L+  GA  T E  +G+T + LA  
Sbjct: 104 -------------------TPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVA 144

Query: 267 NGHNQVLE 274
            G+ +V +
Sbjct: 145 LGYRKVQQ 152

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 75.9 bits (188), Expect = 5e-16
 Identities = 23/89 (25%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 8   TEISKAL-------NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
           T+I   L       N     G TPLL A    H++ V  +L   A +      G + + L
Sbjct: 82  TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDL 141

Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRT 89
           A   GY KV   +  H   +   + V   
Sbjct: 142 AVALGYRKVQQVIENHILKLFQSNLVPAD 170

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  174 bits (445), Expect = 2e-50
 Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 28/196 (14%)

Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           GS   M  +      GN   VRL L++    ++    ++G++PLH AC  G   VV +L+
Sbjct: 1   GSPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGD-DHGFSPLHWACREGRSAVVEMLI 59

Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
            R A  +   ++   T LH+AA+HGH  +V+ LL   A+INA ++ G   +H A  +G  
Sbjct: 60  MRGAR-INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQD 118

Query: 452 GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ 511
            +   L+  G  V +                           +K G+  +  A       
Sbjct: 119 QVAEDLVANGALVSI--------------------------CNKYGEMPVDKAKAPLREL 152

Query: 512 MVEVLLGQGAEINATD 527
           + E     G  +N   
Sbjct: 153 LRERAEKMGQNLNRIP 168

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  168 bits (429), Expect = 3e-48
 Identities = 41/225 (18%), Positives = 76/225 (33%), Gaps = 51/225 (22%)

Query: 401 ADKNGKTCLHIAATHGHLQMVEVLLGQGA-EINATDKGGARSIHTAARYGHVGIINTLLQ 459
                   +      G+   V + L     ++N  D  G   +H A R G   ++  L+ 
Sbjct: 1   GSPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIM 60

Query: 460 KGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ 519
           +G +++V                           ++   T LH+AA+HGH  +V+ LL  
Sbjct: 61  RGARINVM--------------------------NRGDDTPLHLAASHGHRDIVQKLLQY 94

Query: 520 GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTL 579
            A+INA ++                  G   LH A   G   +   LV  + A++ I   
Sbjct: 95  KADINAVNE-----------------HGNVPLHYACFWGQDQVAEDLV-ANGALVSICNK 136

Query: 580 RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQN 624
             + P+  A    +  + +    +G +++        P       
Sbjct: 137 YGEMPVDKAKAPLRELLRERAEKMGQNLNRI------PYKDTFWK 175

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  165 bits (420), Expect = 4e-47
 Identities = 45/227 (19%), Positives = 75/227 (33%), Gaps = 50/227 (22%)

Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 428
               + +   C  G+   V L L    + L   D +G + LH A   G   +VE+L+ +G
Sbjct: 3   PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG 62

Query: 429 AEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAAD 488
           A IN  ++G    +H AA +GH  I+  LLQ    ++                       
Sbjct: 63  ARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAV--------------------- 101

Query: 489 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGR 548
                +++G   LH A   G  Q+ E L+  GA ++  +K                  G 
Sbjct: 102 -----NEHGNVPLHYACFWGQDQVAEDLVANGALVSICNK-----------------YGE 139

Query: 549 TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQ 595
             +  A       L           ++      + P       G  +
Sbjct: 140 MPVDKAKAPLRELLRERAE-KMGQNLN------RIPYKDTFWKGTTR 179

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  146 bits (371), Expect = 2e-40
 Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 2/155 (1%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHAR-VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAF 79
               +   C  G+   V   L+N    ++  D  G S LH A   G   V + L+   A 
Sbjct: 5   FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR 64

Query: 80  INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
           IN  +R   T LHLAA +G+ D+ + L+  + A I+ +      PLH A   GQ QV + 
Sbjct: 65  INVMNRGDDTPLHLAASHGHRDIVQKLL-QYKADINAVNEHGNVPLHYACFWGQDQVAED 123

Query: 140 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 174
           L+  GA +   +  G+ P+  A       + +   
Sbjct: 124 LVANGALVSICNKYGEMPVDKAKAPLRELLRERAE 158

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  136 bits (344), Expect = 6e-37
 Identities = 42/222 (18%), Positives = 70/222 (31%), Gaps = 45/222 (20%)

Query: 51  DQEGRSALHLAAEHGYLKVCDALLTHKAF-INSKSRVGRTALHLAAMNGYADLCRFLVHD 109
             E    +      G        L +    +N     G + LH A   G + +   L+  
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLI-M 60

Query: 110 HAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEV 169
             A I+++     TPLHLAA  G   + + LL   A I+A ++ G  P+H A      +V
Sbjct: 61  RGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQV 120

Query: 170 AQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQ 229
           A+  + A+ +LV+   K G                                      P+ 
Sbjct: 121 AEDLV-ANGALVSICNKYGE------------------------------------MPVD 143

Query: 230 LAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQ 271
            A       +     K G    + N+  +         G  +
Sbjct: 144 KAKAPLRELLRERAEKMGQ---NLNRIPY---KDTFWKGTTR 179

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  131 bits (331), Expect = 4e-35
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 7/151 (4%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           LN+    G++PL  AC  G   +V  ++   AR++V ++   + LHLAA HG+  +   L
Sbjct: 32  LNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKL 91

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           L +KA IN+ +  G   LH A   G   +   LV  + A++ I     + P+  A    +
Sbjct: 92  LQYKADINAVNEHGNVPLHYACFWGQDQVAEDLV-ANGALVSICNKYGEMPVDKAKAPLR 150

Query: 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQN 164
             + +    +G +++        P       
Sbjct: 151 ELLRERAEKMGQNLNRI------PYKDTFWK 175

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  115 bits (291), Expect = 9e-30
 Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 59/234 (25%)

Query: 151 DDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKF 210
             +    I    +       +++L    + +      G                      
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGF--------------------- 40

Query: 211 DRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHN 270
                          +PL  A   G + VV +L+  GA     N+   T +HLAA +GH 
Sbjct: 41  ---------------SPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHR 85

Query: 271 QVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLG 329
            +++++   KA ++ +  + G   LH A ++GQ     +L+++           GA    
Sbjct: 86  DIVQKLLQYKA-DINAVNEHGNVPLHYACFWGQDQVAEDLVAN-----------GALV-- 131

Query: 330 ELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGH 383
            + ++ G  P+  A     E +        G  ++         P     + G 
Sbjct: 132 SICNKYGEMPVDKAKAPLRELLRERAE-KMGQNLNR-------IPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 88.6 bits (221), Expect = 2e-20
 Identities = 19/88 (21%), Positives = 36/88 (40%)

Query: 547 GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
               +      G A   R  + +    ++       +PLH A   G+  V ++L+  GA 
Sbjct: 5   FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR 64

Query: 607 IDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           I+  +     P+H+AA +   ++ Q  L
Sbjct: 65  INVMNRGDDTPLHLAASHGHRDIVQKLL 92

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  141 bits (358), Expect = 4e-38
 Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 29/217 (13%)

Query: 20  IGWTPLLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKA 78
           I  +PLL+A     ++ ++ +L      V      G +ALH+AA +  L+    L+    
Sbjct: 2   IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAP 61

Query: 79  FI-----NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDI-------------LTLR 120
            +      S+   G+TALH+A +N   +L R L+    A +               L   
Sbjct: 62  ELVFEPMTSELYEGQTALHIAVINQNVNLVRALL-ARGASVSARATGSVFHYRPHNLIYY 120

Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI---FLRAH 177
            + PL  AA  G  ++ +LL++ GA I A D  G   +H+         A      L ++
Sbjct: 121 GEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSY 180

Query: 178 ------PSLVTATTKDGNTCAHIAAMQGSVGVIEELM 208
                  SL       G T   +A ++G++ + + LM
Sbjct: 181 DGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLM 217

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  138 bits (350), Expect = 5e-37
 Identities = 49/281 (17%), Positives = 90/281 (32%), Gaps = 70/281 (24%)

Query: 405 GKTCLHIAATHGHLQMV-EVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
            ++ L +AA    +Q + ++L  +G E++     G  ++H AA Y ++     L++   +
Sbjct: 3   WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPE 62

Query: 464 VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEI 523
           +                           S    G+T LHIA  + ++ +V  LL +GA +
Sbjct: 63  LVFEPMT---------------------SELYEGQTALHIAVINQNVNLVRALLARGASV 101

Query: 524 NATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQT 583
           +A                    V     H     G                       + 
Sbjct: 102 SARAT---------------GSVFHYRPHNLIYYG-----------------------EH 123

Query: 584 PLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI---FLRAHPSL 640
           PL  AA  G  ++ +LL++ GA I A D  G   +H+         A      L ++   
Sbjct: 124 PLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183

Query: 641 VTATTKEKERAKD----L-IAAGKHCEGMATELLALAAGAD 676
               + E            +A  +    M  + L +     
Sbjct: 184 DHLKSLELVPNNQGLTPFKLAGVEGNIVMF-QHL-MQKRKH 222

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 73.8 bits (182), Expect = 9e-15
 Identities = 29/148 (19%), Positives = 50/148 (33%), Gaps = 20/148 (13%)

Query: 546 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA 605
           +  + L LAA          L+      +       +T LH+AA    L+   +L++   
Sbjct: 2   IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAP 61

Query: 606 SI-----DATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDL------ 654
            +      +   +GQ  +H+A  N    + +  L A  + V+A                 
Sbjct: 62  ELVFEPMTSELYEGQTALHIAVINQNVNLVRALL-ARGASVSARATGSVFHYRPHNLIYY 120

Query: 655 ------IAAGKHCEGMATELLALAAGAD 676
                  AA    E +   LL +  GAD
Sbjct: 121 GEHPLSFAACVGSEEIV-RLL-IEHGAD 146

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  172 bits (438), Expect = 8e-49
 Identities = 40/264 (15%), Positives = 75/264 (28%), Gaps = 54/264 (20%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
            +G   L     +         + + G++V           L  +   G   +V  ++  
Sbjct: 3   ITGQVSLPPGKRTNLRKTGSERI-AHGMRVKFN--PLPLALLLDSSLEGEFDLVQRIIYE 59

Query: 394 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGI 453
             D     +  G T LH A   GH ++V+ L+  G  +NA D  G   +H AA   +V +
Sbjct: 60  VDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV 118

Query: 454 INTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 513
              L++ G  V   T +                       D             G+ Q  
Sbjct: 119 CKFLVESGAAVFAMTYS-----------------------DMQTAADKCEEMEEGYTQCS 155

Query: 514 EVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV 573
           + L G   ++   +K                     AL         +L    + +    
Sbjct: 156 QFLYGVQEKMGIMNK-----------------GVIYALWDYEPQNDDEL---PMKEGD-- 193

Query: 574 IDILTLRK----QTPLHLAAEAGQ 593
             +  + +    +     A    +
Sbjct: 194 -CMTIIHREDEDEIEWWWARLNDK 216

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  168 bits (428), Expect = 2e-47
 Identities = 36/232 (15%), Positives = 68/232 (29%), Gaps = 48/232 (20%)

Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           +  G+  L         +     +  G  +       A  +  ++  G   ++  ++ + 
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLA-LLLDSSLEGEFDLVQRIIYEV 60

Query: 462 EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
           +                               +  G T LH A   GH ++V+ L+  G 
Sbjct: 61  DDPS--------------------------LPNDEGITALHNAVCAGHTEIVKFLVQFGV 94

Query: 522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTL-- 579
            +NA D                   G T LH AA      +C+FLV +  A +  +T   
Sbjct: 95  NVNAADS-----------------DGWTPLHCAASCNNVQVCKFLV-ESGAAVFAMTYSD 136

Query: 580 -RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA 630
            +         E G  Q  + L  +   +   +      +      N  E+ 
Sbjct: 137 MQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELP 188

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  145 bits (368), Expect = 2e-39
 Identities = 39/219 (17%), Positives = 73/219 (33%), Gaps = 10/219 (4%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           G   L         +  +  + +  RV  F+    + L  ++  G   +   ++      
Sbjct: 5   GQVSLPPGKRTNLRKTGSERIAHGMRVK-FNPLPLALLLDSSLEGEFDLVQRIIYEVDDP 63

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           +  +  G TALH A   G+ ++ +FLV      ++       TPLH AA    +QVCK L
Sbjct: 64  SLPNDEGITALHNAVCAGHTEIVKFLV-QFGVNVNAADSDGWTPLHCAASCNNVQVCKFL 122

Query: 141 LDLGASIDATDDQGQK---PIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAM 197
           ++ GA++ A      +         +  + + +Q FL      +    K           
Sbjct: 123 VESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ-FLYGVQEKMGIMNKGVIYALWDYEP 181

Query: 198 QGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGH 236
           Q      +EL   +   +        +      A     
Sbjct: 182 QND----DELPMKEGDCMTIIHREDEDEIEWWWARLNDK 216

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  140 bits (354), Expect = 1e-37
 Identities = 38/249 (15%), Positives = 74/249 (29%), Gaps = 39/249 (15%)

Query: 51  DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH 110
           +  G+ +L         K     + H   +     +    L  +++ G  DL + ++   
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNP-LPLALLLDSSLEGEFDLVQRII-YE 59

Query: 111 AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA 170
                +      T LH A  AG  ++ K L+  G +++A D  G  P+H AA  N  +V 
Sbjct: 60  VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVC 119

Query: 171 QIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQL 230
           +  + +  ++   T  D  T                                  A     
Sbjct: 120 KFLVESGAAVFAMTYSDMQT----------------------------------AADKCE 145

Query: 231 AAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KL 289
             E G+    + L          NK    A+        +++   M+    + +  +   
Sbjct: 146 EMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELP--MKEGDCMTIIHREDE 203

Query: 290 GVTALHVAA 298
                  A 
Sbjct: 204 DEIEWWWAR 212

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  133 bits (338), Expect = 2e-35
 Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 6/192 (3%)

Query: 16  KQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLT 75
           K   +    LL +   G  +LV  ++       + + EG +ALH A   G+ ++   L+ 
Sbjct: 32  KFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQ 91

Query: 76  HKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTL---RKQTPLHLAAEAG 132
               +N+    G T LH AA      +C+FLV +  A +  +T    +         E G
Sbjct: 92  FGVNVNAADSDGWTPLHCAASCNNVQVCKFLV-ESGAAVFAMTYSDMQTAADKCEEMEEG 150

Query: 133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCA 192
             Q  + L  +   +   +      +      N  E+           +     +     
Sbjct: 151 YTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELP--MKEGDCMTIIHREDEDEIEW 208

Query: 193 HIAAMQGSVGVI 204
             A +    G +
Sbjct: 209 WWARLNDKEGYV 220

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  126 bits (319), Expect = 7e-33
 Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 20/183 (10%)

Query: 494 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
           +  G+  L         +     +  G  +                           L  
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPL------------------PLALLLD 43

Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
           +++ G  DL + ++        +      T LH A  AG  ++ K L+  G +++A D  
Sbjct: 44  SSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSD 102

Query: 614 GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAA 673
           G  P+H AA  N  +V +  + +  ++   T  + + A D     +      ++ L    
Sbjct: 103 GWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL-YGV 161

Query: 674 GAD 676
              
Sbjct: 162 QEK 164

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  119 bits (301), Expect = 2e-30
 Identities = 28/266 (10%), Positives = 65/266 (24%), Gaps = 59/266 (22%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
           Q  L         +     +  G  +          +  ++     ++ Q  +       
Sbjct: 6   QVSLPPGKRTNLRKTGSERIAHGMRVKFNPL-PLALLLDSSLEGEFDLVQRII-YEVDDP 63

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
           +    +G                                     T L  A   GH  +V+
Sbjct: 64  SLPNDEGI------------------------------------TALHNAVCAGHTEIVK 87

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK----KLGVTALHVA 297
            LV+ G +    +  G+T +H AA   + QV + +  S A  V++               
Sbjct: 88  FLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGA-AVFAMTYSDMQTAADKCEE 146

Query: 298 AYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLN 357
              G     + L                     + ++  +  L       ++ +   +  
Sbjct: 147 MEEGYTQCSQFLYGV-----------QEKM--GIMNKGVIYALWDYEPQNDDEL--PMKE 191

Query: 358 SAGVQVDAQTQENGYNPLHLACFGGH 383
              + +  + ++        A     
Sbjct: 192 GDCMTIIHR-EDEDEIEWWWARLNDK 216

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  167 bits (426), Expect = 1e-47
 Identities = 48/266 (18%), Positives = 81/266 (30%), Gaps = 71/266 (26%)

Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 428
                 L  A       V  +L      +    D  G T L+IA  +  +++ + L+ +G
Sbjct: 4   YEVGALLEAANQRDTKKVKEILQDTTYQV-DEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62

Query: 429 AEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAAD 488
           A+IN  +         A   G   I                         +  +L  A  
Sbjct: 63  ADINLQNSISDSPYLYAGAQGRTEI-------------------------LAYMLKHATP 97

Query: 489 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGR 548
            L   ++ G   L  AA  GH+  V++LL  G                +  I+ ++  G 
Sbjct: 98  DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG----------------REDIDFQNDFGY 141

Query: 549 TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID 608
           TAL  A                                         + KLL++ GA   
Sbjct: 142 TALIEAVGLR-----------------------------EGNQLYQDIVKLLMENGADQS 172

Query: 609 ATDDQGQKPIHVAAQNNFPEVAQIFL 634
             D+ G+  +  A Q  + E+++I  
Sbjct: 173 IKDNSGRTAMDYANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  155 bits (395), Expect = 2e-43
 Identities = 44/213 (20%), Positives = 76/213 (35%), Gaps = 23/213 (10%)

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSH 312
                  +  A Q    +V E ++ +    V      G T L++A +    +  + L+  
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTY-QVDEVDTEGNTPLNIAVHNNDIEIAKALIDR 61

Query: 313 VPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGY 372
                      GA     L +    +P   A   G   ++  +L  A   ++      G 
Sbjct: 62  -----------GADI--NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHN-RYGG 107

Query: 373 NPLHLACFGGHVTVVGLLLSR-AADLLQSADKNGKTCLHIAAT-----HGHLQMVEVLLG 426
           N L  A   GH+  V LLL     D+    +  G T L  A         +  +V++L+ 
Sbjct: 108 NALIPAAEKGHIDNVKLLLEDGREDI-DFQNDFGYTALIEAVGLREGNQLYQDIVKLLME 166

Query: 427 QGAEINATDKGGARSIHTAARYGHVGIINTLLQ 459
            GA+ +  D  G  ++  A + G+  I   L Q
Sbjct: 167 NGADQSIKDNSGRTAMDYANQKGYTEISKILAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  142 bits (362), Expect = 6e-39
 Identities = 36/225 (16%), Positives = 79/225 (35%), Gaps = 33/225 (14%)

Query: 51  DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH 110
             E  + L  A +    KV + L      ++     G T L++A  N   ++ + L+ D 
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALI-DR 61

Query: 111 AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS-IDATDDQGQKPIHVAAQNNFPEV 169
            A I++      +P   A   G+ ++   +L      ++  +  G   +  AA+    + 
Sbjct: 62  GADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDN 121

Query: 170 AQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQ 229
            ++ L      +      G T    A                                  
Sbjct: 122 VKLLLEDGREDIDFQNDFGYTALIEAVGLRE----------------------------- 152

Query: 230 LAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
                 + ++V++L++ GA  + ++ +G TA+  A Q G+ ++ +
Sbjct: 153 --GNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISK 195

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  141 bits (357), Expect = 2e-38
 Identities = 40/198 (20%), Positives = 81/198 (40%), Gaps = 9/198 (4%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
               L  A  R   ++   + +   +VD  D EG + L++A  +  +++  AL+   A I
Sbjct: 6   VGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI 65

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV-IDILTLRKQTPLHLAAEAGQLQVCKL 139
           N ++ +  +    A   G  ++  +++  HA   ++         L  AAE G +   KL
Sbjct: 66  NLQNSISDSPYLYAGAQGRTEILAYML-KHATPDLNKHNRYGGNALIPAAEKGHIDNVKL 124

Query: 140 LLDLG-ASIDATDDQGQKPIHVAA-----QNNFPEVAQIFLRAHPSLVTATTKDGNTCAH 193
           LL+ G   ID  +D G   +  A         + ++ +  L  + +  +     G T   
Sbjct: 125 LLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK-LLMENGADQSIKDNSGRTAMD 183

Query: 194 IAAMQGSVGVIEELMKFD 211
            A  +G   + + L +++
Sbjct: 184 YANQKGYTEISKILAQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  133 bits (337), Expect = 1e-35
 Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 6/166 (3%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           ++  + G TPL IA +   +E+   +++  A +++ +    S    A   G  ++   +L
Sbjct: 33  DEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYML 92

Query: 75  THKAF-INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA---- 129
            H    +N  +R G  AL  AA  G+ D  + L+ D    ID       T L  A     
Sbjct: 93  KHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLRE 152

Query: 130 -EAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 174
                  + KLL++ GA     D+ G+  +  A Q  + E+++I  
Sbjct: 153 GNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  131 bits (331), Expect = 7e-35
 Identities = 45/243 (18%), Positives = 77/243 (31%), Gaps = 49/243 (20%)

Query: 185 TKDGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVL 243
           T +       A  + +  V E L     +   +   +     TPL +A       + + L
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQD---TTYQVDEVDT-EGNTPLNIAVHNNDIEIAKAL 58

Query: 244 VKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQ 302
           +  GA    +N    +    A   G  ++L  M      ++    + G  AL  AA  G 
Sbjct: 59  IDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGH 118

Query: 303 ADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQ 362
            D V+ LL    G    D         +  ++ G T L  A      N            
Sbjct: 119 IDNVKLLLED--GRE--DI--------DFQNDFGYTALIEAVGLREGN------------ 154

Query: 363 VDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE 422
                               +  +V LL+   AD     D +G+T +  A   G+ ++ +
Sbjct: 155 ------------------QLYQDIVKLLMENGAD-QSIKDNSGRTAMDYANQKGYTEISK 195

Query: 423 VLL 425
           +L 
Sbjct: 196 ILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  120 bits (304), Expect = 3e-31
 Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 24/164 (14%)

Query: 494 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK----------------VCDALLTHK 537
                  L  A      ++ E+L     +++  D                 +  AL+   
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62

Query: 538 AFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV-IDILTLRKQTPLHLAAEAGQLQV 596
           A IN ++ +  +    A   G  ++  +++  HA   ++         L  AAE G +  
Sbjct: 63  ADINLQNSISDSPYLYAGAQGRTEILAYML-KHATPDLNKHNRYGGNALIPAAEKGHIDN 121

Query: 597 CKLLLDLG-ASIDATDDQGQKPIHVAA-----QNNFPEVAQIFL 634
            KLLL+ G   ID  +D G   +  A         + ++ ++ +
Sbjct: 122 VKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLM 165

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 85.6 bits (213), Expect = 5e-19
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 543 KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 602
           K+      L  A       +   L  D    +D +     TPL++A     +++ K L+D
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQ-DTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALID 60

Query: 603 LGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
            GA I+  +     P   A      E+    L
Sbjct: 61  RGADINLQNSISDSPYLYAGAQGRTEILAYML 92

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 81.3 bits (202), Expect = 1e-17
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAA-----EHGYL 67
           LNK    G   L+ A  +GH++ V  +L +    +D  +  G +AL  A         Y 
Sbjct: 99  LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158

Query: 68  KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV-HD 109
            +   L+ + A  + K   GRTA+  A   GY ++ + L  ++
Sbjct: 159 DIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  166 bits (421), Expect = 1e-46
 Identities = 72/277 (25%), Positives = 104/277 (37%), Gaps = 49/277 (17%)

Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           G  S +   +LA     + +   +L +          ++    LH AC  GH  +V  LL
Sbjct: 3   GCVSNIMICNLAYSGKLDELKERIL-ADKSLATRTD-QDSRTALHWACSAGHTEIVEFLL 60

Query: 392 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHV 451
                 +   D  G + LHIAA+ G  ++V+ LL +GA +NA ++ G   +H AA     
Sbjct: 61  QLGVP-VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRH 119

Query: 452 GIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ 511
            I   LL+ G   D                          + D    T +H AA  G+L+
Sbjct: 120 EIAVMLLEGGANPD--------------------------AKDHYDATAMHRAAAKGNLK 153

Query: 512 MVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHA 571
           MV +LL   A  N  D                   G T LHLA      +  +FLV    
Sbjct: 154 MVHILLFYKASTNIQDT-----------------EGNTPLHLACDEERVEEAKFLV-TQG 195

Query: 572 AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID 608
           A I I    ++TPL +A   G L +    L  G    
Sbjct: 196 ASIYIENKEEKTPLQVA--KGGLGLILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  151 bits (384), Expect = 9e-42
 Identities = 66/272 (24%), Positives = 104/272 (38%), Gaps = 46/272 (16%)

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSH 312
             +     +LA     +++ E + + K+       +   TALH A   G  + V  LL  
Sbjct: 4   CVSNIMICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQL 62

Query: 313 VPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGY 372
                      G         ++G +PLH+AA +G + +V+ LL   G  V+A   +NG 
Sbjct: 63  -----------GVPV--NDKDDAGWSPLHIAASAGXDEIVKALL-VKGAHVNAVN-QNGC 107

Query: 373 NPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 432
            PLH A       +  +LL   A+   + D    T +H AA  G+L+MV +LL   A  N
Sbjct: 108 TPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN 166

Query: 433 ATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQS 492
             D  G   +H A     V     L+ +G  +                            
Sbjct: 167 IQDTEGNTPLHLACDEERVEEAKFLVTQGASIY--------------------------I 200

Query: 493 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 524
            +K  KT L +A   G L ++   L +G E +
Sbjct: 201 ENKEEKTPLQVAK--GGLGLILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  150 bits (381), Expect = 3e-41
 Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 7/228 (3%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
                 +A +    EL   +L + +     DQ+ R+ALH A   G+ ++ + LL     +
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 66

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           N K   G + LH+AA  G  ++ + L+    A ++ +     TPLH AA   + ++  +L
Sbjct: 67  NDKDDAGWSPLHIAASAGXDEIVKALL-VKGAHVNAVNQNGCTPLHYAASKNRHEIAVML 125

Query: 141 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGS 200
           L+ GA+ DA D      +H AA     ++  I L  + +       +GNT  H+A  +  
Sbjct: 126 LEGGANPDAKDHYDATAMHRAAAKGNLKMVHILL-FYKASTNIQDTEGNTPLHLACDEER 184

Query: 201 VGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGA 248
           V   + L+   +   I   N+  E TPLQ+A   G   ++   +  G 
Sbjct: 185 VEEAKFLV--TQGASIYIENK-EEKTPLQVAK--GGLGLILKRLAEGE 227

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  136 bits (343), Expect = 3e-36
 Identities = 63/279 (22%), Positives = 100/279 (35%), Gaps = 55/279 (19%)

Query: 154 GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRS 213
                ++A      E+ +  L A  SL T T +D  T                       
Sbjct: 7   NIMICNLAYSGKLDELKERIL-ADKSLATRTDQDSRT----------------------- 42

Query: 214 GVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVL 273
                         L  A   GH  +V  L++ G    D++  G++ +H+AA  G ++++
Sbjct: 43  -------------ALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIV 89

Query: 274 EEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGS 333
           + +    A      + G T LH AA   + +    LL         D             
Sbjct: 90  KALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD------------- 136

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
               T +H AA  GN  +V +LL       + Q    G  PLHLAC    V     L+++
Sbjct: 137 HYDATAMHRAAAKGNLKMVHILL-FYKASTNIQD-TEGNTPLHLACDEERVEEAKFLVTQ 194

Query: 394 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 432
            A  +   +K  KT L +A   G L ++   L +G E +
Sbjct: 195 GAS-IYIENKEEKTPLQVAK--GGLGLILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  133 bits (336), Expect = 3e-35
 Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 4/193 (2%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
            +      T L  AC+ GH E+V  +L     V+  D  G S LH+AA  G  ++  ALL
Sbjct: 34  TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALL 93

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
              A +N+ ++ G T LH AA     ++   L+ +  A  D       T +H AA  G L
Sbjct: 94  VKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL-EGGANPDAKDHYDATAMHRAAAKGNL 152

Query: 135 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHI 194
           ++  +LL   AS +  D +G  P+H+A      E A+  +    + +    K+  T   +
Sbjct: 153 KMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLV-TQGASIYIENKEEKTPLQV 211

Query: 195 AAMQGSVGVIEEL 207
           A   G +G+I + 
Sbjct: 212 AK--GGLGLILKR 222

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 94.9 bits (236), Expect = 5e-22
 Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 3/135 (2%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N     G TPL  A ++   E+   +L   A  D  D    +A+H AA  G LK+   L
Sbjct: 99  VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHIL 158

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           L +KA  N +   G T LHLA      +  +FLV    A I I    ++TPL +A   G 
Sbjct: 159 LFYKASTNIQDTEGNTPLHLACDEERVEEAKFLV-TQGASIYIENKEEKTPLQVA--KGG 215

Query: 134 LQVCKLLLDLGASID 148
           L +    L  G    
Sbjct: 216 LGLILKRLAEGEEAS 230

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  163 bits (415), Expect = 3e-46
 Identities = 46/235 (19%), Positives = 80/235 (34%), Gaps = 52/235 (22%)

Query: 333 SESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLS 392
            ++G     +         +  L N                PL +AC  G    +  L+ 
Sbjct: 5   DKNGEIVEKIKDEKSINQNLDFLRNY--------RDSYNRTPLMVACMLGMENAIDKLVE 56

Query: 393 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452
               L +  D  G T L  A  +  L + E LL +G+ +N  D  G   +  +  +G+  
Sbjct: 57  NFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSE 115

Query: 453 IINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 512
           +   LL+ G  V+                            +  G+T L +A+ +G  ++
Sbjct: 116 MSYFLLEHGANVNDR--------------------------NLEGETPLIVASKYGRSEI 149

Query: 513 VEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 567
           V+ LL  GA+I+A D                   G TA   A + G  ++ +   
Sbjct: 150 VKKLLELGADISARDL-----------------TGLTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  156 bits (398), Expect = 6e-44
 Identities = 56/235 (23%), Positives = 90/235 (38%), Gaps = 50/235 (21%)

Query: 400 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ 459
             DKNG+    I       Q ++ L       N  D      +  A   G    I+ L++
Sbjct: 3   HMDKNGEIVEKIKDEKSINQNLDFL------RNYRDSYNRTPLMVACMLGMENAIDKLVE 56

Query: 460 KGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ 519
             +K++                            D  G T L  A  +  L + E LL +
Sbjct: 57  NFDKLEDK--------------------------DIEGSTALIWAVKNNRLGIAEKLLSK 90

Query: 520 GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTL 579
           G+ +N  D                   G+T L  + + GY+++  FL+ +H A ++   L
Sbjct: 91  GSNVNTKDFS-----------------GKTPLMWSIIFGYSEMSYFLL-EHGANVNDRNL 132

Query: 580 RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
             +TPL +A++ G+ ++ K LL+LGA I A D  G      A      EV +IF 
Sbjct: 133 EGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  156 bits (396), Expect = 1e-43
 Identities = 44/239 (18%), Positives = 87/239 (36%), Gaps = 53/239 (22%)

Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAADLLQSA-DKNGKTCLHIAATHGHLQMVEVLLGQ 427
           +NG     +              ++  D L++  D   +T L +A   G    ++ L+  
Sbjct: 6   KNGEIVEKIKDEKSI--------NQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVEN 57

Query: 428 GAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAA 487
             ++   D  G+ ++  A +   +GI                            LLS+ +
Sbjct: 58  FDKLEDKDIEGSTALIWAVKNNRLGI-------------------------AEKLLSKGS 92

Query: 488 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVG 547
           ++  + D +GKT L  +   G+ +M   LL  GA +N  +                   G
Sbjct: 93  NV-NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLE-----------------G 134

Query: 548 RTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
            T L +A+  G +++ + L+ +  A I    L   T    A   G+ +V K+  ++  +
Sbjct: 135 ETPLIVASKYGRSEIVKKLL-ELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRRA 192

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  154 bits (392), Expect = 4e-43
 Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 22/205 (10%)

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHV 313
           +K G     +  +   NQ L+ +R+ +           T L VA   G  + + +L+ + 
Sbjct: 5   DKNGEIVEKIKDEKSINQNLDFLRNYRD------SYNRTPLMVACMLGMENAIDKLVEN- 57

Query: 314 PGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYN 373
                           E     G T L  A  +    +   LL S G  V+ +   +G  
Sbjct: 58  ----------FDKL--EDKDIEGSTALIWAVKNNRLGIAEKLL-SKGSNVNTKD-FSGKT 103

Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
           PL  +   G+  +   LL   A+ +   +  G+T L +A+ +G  ++V+ LL  GA+I+A
Sbjct: 104 PLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA 162

Query: 434 TDKGGARSIHTAARYGHVGIINTLL 458
            D  G  +  +A  +G   +I    
Sbjct: 163 RDLTGLTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  140 bits (356), Expect = 3e-38
 Identities = 50/161 (31%), Positives = 88/161 (54%), Gaps = 1/161 (0%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
            N + S   TPL++AC  G    ++ ++ N  +++  D EG +AL  A ++  L + + L
Sbjct: 28  RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKL 87

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           L+  + +N+K   G+T L  + + GY+++  FL+ +H A ++   L  +TPL +A++ G+
Sbjct: 88  LSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLL-EHGANVNDRNLEGETPLIVASKYGR 146

Query: 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 174
            ++ K LL+LGA I A D  G      A      EV +IF 
Sbjct: 147 SEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  130 bits (330), Expect = 7e-35
 Identities = 45/224 (20%), Positives = 85/224 (37%), Gaps = 44/224 (19%)

Query: 51  DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH 110
           D+ G     +  E    +  D L       N +    RT L +A M G  +    LV ++
Sbjct: 5   DKNGEIVEKIKDEKSINQNLDFL------RNYRDSYNRTPLMVACMLGMENAIDKLV-EN 57

Query: 111 AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA 170
              ++   +   T L  A +  +L + + LL  G++++  D  G+ P+  +    + E++
Sbjct: 58  FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMS 117

Query: 171 QIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQL 230
              L  H + V     +G                                     TPL +
Sbjct: 118 YFLL-EHGANVNDRNLEGE------------------------------------TPLIV 140

Query: 231 AAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
           A++ G + +V+ L++ GA  +  + TG TA   A   G  +V++
Sbjct: 141 ASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIK 184

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  126 bits (319), Expect = 2e-33
 Identities = 39/237 (16%), Positives = 83/237 (35%), Gaps = 54/237 (22%)

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK----QTPLHLAAEAGQLQV 136
           +   + G     +                    +D L   +    +TPL +A   G    
Sbjct: 2   SHMDKNGEIVEKIKDEKS-----------INQNLDFLRNYRDSYNRTPLMVACMLGMENA 50

Query: 137 CKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAA 196
              L++    ++  D +G   +  A +NN   +A+  L +  S V      G        
Sbjct: 51  IDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL-SKGSNVNTKDFSGK------- 102

Query: 197 MQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKT 256
                                        TPL  +   G++ +   L++ GA+  D N  
Sbjct: 103 -----------------------------TPLMWSIIFGYSEMSYFLLEHGANVNDRNLE 133

Query: 257 GFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSH 312
           G T + +A++ G +++++++    A ++ ++   G+TA   A  FG+ + ++     
Sbjct: 134 GETPLIVASKYGRSEIVKKLLELGA-DISARDLTGLTAEASARIFGRQEVIKIFTEV 189

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  124 bits (313), Expect = 1e-32
 Identities = 48/240 (20%), Positives = 77/240 (32%), Gaps = 58/240 (24%)

Query: 186 KDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVK 245
           K+G     I   +     ++ L         + R+     TPL +A   G  N +  LV+
Sbjct: 6   KNGEIVEKIKDEKSINQNLDFL--------RNYRDS-YNRTPLMVACMLGMENAIDKLVE 56

Query: 246 AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADT 305
                 D++  G TA+  A +N                                      
Sbjct: 57  NFDKLEDKDIEGSTALIWAVKNNRL---------------------------------GI 83

Query: 306 VRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDA 365
             +LLS            G++        SG TPL  +   G   +   LL   G  V+ 
Sbjct: 84  AEKLLSK-----------GSNV--NTKDFSGKTPLMWSIIFGYSEMSYFLL-EHGANVND 129

Query: 366 QTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 425
           +    G  PL +A   G   +V  LL   AD + + D  G T    A   G  +++++  
Sbjct: 130 RN-LEGETPLIVASKYGRSEIVKKLLELGAD-ISARDLTGLTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 76.7 bits (190), Expect = 5e-16
 Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 15/98 (15%)

Query: 541 NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK----QTPLHLAAEAGQLQV 596
           +   + G     +                    +D L   +    +TPL +A   G    
Sbjct: 2   SHMDKNGEIVEKIKDEKS-----------INQNLDFLRNYRDSYNRTPLMVACMLGMENA 50

Query: 597 CKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
              L++    ++  D +G   +  A +NN   +A+  L
Sbjct: 51  IDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL 88

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 56.6 bits (138), Expect = 3e-09
 Identities = 17/64 (26%), Positives = 26/64 (40%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N +   G TPL++A   G  E+V  +L   A +   D  G +A   A   G  +V     
Sbjct: 128 NDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187

Query: 75  THKA 78
             + 
Sbjct: 188 EVRR 191

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  154 bits (393), Expect = 2e-43
 Identities = 67/211 (31%), Positives = 95/211 (45%), Gaps = 45/211 (21%)

Query: 360 GVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQ 419
           G         +    L  A   G    V +L++  AD + + D +G T LH+AA +GHL+
Sbjct: 3   GSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLE 61

Query: 420 MVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVV 479
           +VEVLL  GA++NA D  G   +  AA +GH+ I+  LL+ G  V+              
Sbjct: 62  IVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNA------------- 108

Query: 480 GLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAF 539
                         D  G T LH+AA  GHL++VEVLL  GA++NA DK           
Sbjct: 109 -------------NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDK----------- 144

Query: 540 INSKSRVGRTALHLAAMNGYADLCRFLV-HD 569
                  G+TA  ++  NG  DL   L   +
Sbjct: 145 ------FGKTAFDISIDNGNEDLAEILQKLN 169

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  154 bits (392), Expect = 2e-43
 Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 44/209 (21%)

Query: 393 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452
           R +        +    L  AA  G    V +L+  GA++NA D  G   +H AA  GH+ 
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLE 61

Query: 453 IINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 512
           I+  LL+ G  V+                          + D  G T L +AA  GHL++
Sbjct: 62  IVEVLLKNGADVN--------------------------AVDHAGMTPLRLAALFGHLEI 95

Query: 513 VEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAA 572
           VEVLL  GA++NA D                   G T LHLAAM G+ ++   L+  + A
Sbjct: 96  VEVLLKNGADVNANDM-----------------EGHTPLHLAAMFGHLEIVEVLL-KNGA 137

Query: 573 VIDILTLRKQTPLHLAAEAGQLQVCKLLL 601
            ++      +T   ++ + G   + ++L 
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  146 bits (372), Expect = 9e-41
 Identities = 62/171 (36%), Positives = 87/171 (50%), Gaps = 16/171 (9%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
               L  AA  G+ D VR L+++           GA         SG TPLHLAA++G+ 
Sbjct: 14  LGKKLLEAARAGRDDEVRILMAN-----------GADV--NAEDASGWTPLHLAAFNGHL 60

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
            +V +LL   G  V+A     G  PL LA   GH+ +V +LL   AD+  + D  G T L
Sbjct: 61  EIVEVLL-KNGADVNAVD-HAGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPL 117

Query: 410 HIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQK 460
           H+AA  GHL++VEVLL  GA++NA DK G  +   +   G+  +   L + 
Sbjct: 118 HLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  142 bits (361), Expect = 3e-39
 Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 4/170 (2%)

Query: 5   MSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEH 64
           M G+      +   S     LL A   G  + V  ++ N A V+  D  G + LHLAA +
Sbjct: 1   MRGSHH---HHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFN 57

Query: 65  GYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTP 124
           G+L++ + LL + A +N+    G T L LAA+ G+ ++   L+  + A ++   +   TP
Sbjct: 58  GHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLL-KNGADVNANDMEGHTP 116

Query: 125 LHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 174
           LHLAA  G L++ ++LL  GA ++A D  G+    ++  N   ++A+I  
Sbjct: 117 LHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  136 bits (346), Expect = 3e-37
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 45/209 (21%)

Query: 427 QGAEIN-ATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSR 485
           +G+  +        + +  AAR G    +  L+  G  V+                    
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVN-------------------- 41

Query: 486 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSR 545
                 + D +G T LH+AA +GHL++VEVLL  GA++NA D                  
Sbjct: 42  ------AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHA---------------- 79

Query: 546 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA 605
            G T L LAA+ G+ ++   L+  + A ++   +   TPLHLAA  G L++ ++LL  GA
Sbjct: 80  -GMTPLRLAALFGHLEIVEVLL-KNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA 137

Query: 606 SIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
            ++A D  G+    ++  N   ++A+I  
Sbjct: 138 DVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  130 bits (331), Expect = 3e-35
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 2/158 (1%)

Query: 54  GRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV 113
               L  AA  G       L+ + A +N++   G T LHLAA NG+ ++   L+  + A 
Sbjct: 14  LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLL-KNGAD 72

Query: 114 IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 173
           ++ +     TPL LAA  G L++ ++LL  GA ++A D +G  P+H+AA     E+ +  
Sbjct: 73  VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVE-V 131

Query: 174 LRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFD 211
           L  + + V A  K G T   I+   G+  + E L K +
Sbjct: 132 LLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  120 bits (305), Expect = 8e-32
 Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 39/192 (20%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
              L  AA AG+    ++L+  GA ++A D  G  P+H+AA N   E+ ++ L  + + V
Sbjct: 15  GKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLL-KNGADV 73

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
            A    G T                                    PL+LAA  GH  +V 
Sbjct: 74  NAVDHAGMT------------------------------------PLRLAALFGHLEIVE 97

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYF 300
           VL+K GA     +  G T +HLAA  GH +++E +  + A +V ++ K G TA  ++   
Sbjct: 98  VLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA-DVNAQDKFGKTAFDISIDN 156

Query: 301 GQADTVRELLSH 312
           G  D    L   
Sbjct: 157 GNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 57.0 bits (139), Expect = 1e-09
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N     G TPL +A   GH+E+V  +L N A V+  D+ G++A  ++ ++G   + + L 
Sbjct: 107 NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

Query: 75  TH 76
             
Sbjct: 167 KL 168

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  152 bits (387), Expect = 7e-43
 Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 29/189 (15%)

Query: 333 SESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLS 392
           +E     L  AA  G+   +  LL    V V+AQ    G   L +   G +  +   LL 
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLL-QNNVNVNAQN-GFGRTALQVMKLG-NPEIARRLLL 58

Query: 393 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452
           R A+     D+ G   +H AA  G L  ++ LL   A++N  D  G   +H AA+ GH+ 
Sbjct: 59  RGANP-DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR 117

Query: 453 IINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 512
           +                         V  L+   A  +   +  G T   +A  +G  ++
Sbjct: 118 V-------------------------VEFLVKHTASNVGHRNHKGDTACDLARLYGRNEV 152

Query: 513 VEVLLGQGA 521
           V ++   GA
Sbjct: 153 VSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  145 bits (368), Expect = 2e-40
 Identities = 46/202 (22%), Positives = 69/202 (34%), Gaps = 44/202 (21%)

Query: 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
                L  AA  G L+ +  LL     +NA +  G  ++                     
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL---------------- 47

Query: 464 VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEI 523
                     G+  +   LL R A+     D+ G   +H AA  G L  ++ LL   A++
Sbjct: 48  ----------GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV 96

Query: 524 NATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQT 583
           N  D                   G   LHLAA  G+  +  FLV   A+ +     +  T
Sbjct: 97  NIEDNE-----------------GNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT 139

Query: 584 PLHLAAEAGQLQVCKLLLDLGA 605
              LA   G+ +V  L+   GA
Sbjct: 140 ACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  131 bits (332), Expect = 2e-35
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 3/155 (1%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
               L  A  RG +E + ++L N+  V+  +  GR+AL +    G  ++   LL   A  
Sbjct: 5   WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP 63

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           + K R G   +H AA  G+ D  + L+ +  A ++I       PLHLAA+ G L+V + L
Sbjct: 64  DLKDRTGFAVIHDAARAGFLDTLQTLL-EFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122

Query: 141 LDLGAS-IDATDDQGQKPIHVAAQNNFPEVAQIFL 174
           +   AS +   + +G     +A      EV  +  
Sbjct: 123 VKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 157

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  124 bits (315), Expect = 3e-33
 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 2/155 (1%)

Query: 53  EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAA 112
              + L  AA  G L+   +LL +   +N+++  GRTAL +    G  ++ R L+    A
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLL-LRGA 61

Query: 113 VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI 172
             D+        +H AA AG L   + LL+  A ++  D++G  P+H+AA+     V + 
Sbjct: 62  NPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEF 121

Query: 173 FLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL 207
            ++   S V      G+T   +A + G   V+  +
Sbjct: 122 LVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  124 bits (314), Expect = 5e-33
 Identities = 42/202 (20%), Positives = 74/202 (36%), Gaps = 47/202 (23%)

Query: 434 TDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSA 493
            +  G   + +AA  G +  + +LLQ    V+                            
Sbjct: 2   AEPWG-NELASAAARGDLEQLTSLLQNNVNVNAQ-------------------------- 34

Query: 494 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
           +  G+T L +    G+ ++   LL +GA  +  D+                  G   +H 
Sbjct: 35  NGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRT-----------------GFAVIHD 76

Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS-IDATDD 612
           AA  G+ D  + L+ +  A ++I       PLHLAA+ G L+V + L+   AS +   + 
Sbjct: 77  AARAGFLDTLQTLL-EFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNH 135

Query: 613 QGQKPIHVAAQNNFPEVAQIFL 634
           +G     +A      EV  +  
Sbjct: 136 KGDTACDLARLYGRNEVVSLMQ 157

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  119 bits (300), Expect = 3e-31
 Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 39/192 (20%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
              L  AA  G L+    LL    +++A +  G+  + V    N PE+A+  L    +  
Sbjct: 6   GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGN-PEIARRLL-LRGANP 63

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
               + G                                       +  AA  G  + ++
Sbjct: 64  DLKDRTGFA------------------------------------VIHDAARAGFLDTLQ 87

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYF 300
            L++  A    E+  G   +HLAA+ GH +V+E +    A NV  +   G TA  +A  +
Sbjct: 88  TLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY 147

Query: 301 GQADTVRELLSH 312
           G+ + V  + ++
Sbjct: 148 GRNEVVSLMQAN 159

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  114 bits (287), Expect = 2e-29
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 1/131 (0%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N Q   G T L +    G+ E+   +L   A  D+ D+ G + +H AA  G+L     LL
Sbjct: 32  NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLL 90

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
             +A +N +   G   LHLAA  G+  +  FLV   A+ +     +  T   LA   G+ 
Sbjct: 91  EFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRN 150

Query: 135 QVCKLLLDLGA 145
           +V  L+   GA
Sbjct: 151 EVVSLMQANGA 161

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  151 bits (384), Expect = 1e-42
 Identities = 51/184 (27%), Positives = 71/184 (38%), Gaps = 30/184 (16%)

Query: 336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAA 395
               L  AA  G+   VR LL+   V  DA     G   L +  FG    +   LL + A
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTALQVMMFG-STAIALELLKQGA 59

Query: 396 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIIN 455
                 D +G + +H AA  G L  ++VL+  GA++N  D  GA  IH A + GH     
Sbjct: 60  SP-NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTA--- 115

Query: 456 TLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEV 515
                                 VV  L + +   L   D  G T L +A   G   +V++
Sbjct: 116 ----------------------VVSFLAAESD--LHRRDARGLTPLELALQRGAQDLVDI 151

Query: 516 LLGQ 519
           L G 
Sbjct: 152 LQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  137 bits (347), Expect = 2e-37
 Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 5/158 (3%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAF 79
               L  A  RG ++ V  +L+      D  ++ G++AL +    G   +   LL   A 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGAS 60

Query: 80  INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
            N +   G + +H AA  G+ D  + LV +H A +++       P+HLA + G   V   
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLV-EHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119

Query: 140 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 177
           L    + +   D +G  P+ +A Q    ++    L+ H
Sbjct: 120 LAA-ESDLHRRDARGLTPLELALQRGAQDLVD-ILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  132 bits (335), Expect = 5e-36
 Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 19/172 (11%)

Query: 257 GFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSHVPG 315
               +  AA  G  Q +  +   + ++  +  + G TAL V  + G      ELL     
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQ--- 57

Query: 316 TVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPL 375
                   GAS    +   SG +P+H AA +G  + +++L+   G  V+      G  P+
Sbjct: 58  --------GASP--NVQDTSGTSPVHDAARTGFLDTLKVLV-EHGADVNVPD-GTGALPI 105

Query: 376 HLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ 427
           HLA   GH  VV  L + +   L   D  G T L +A   G   +V++L G 
Sbjct: 106 HLAVQEGHTAVVSFLAAESD--LHRRDARGLTPLELALQRGAQDLVDILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  131 bits (332), Expect = 1e-35
 Identities = 45/201 (22%), Positives = 73/201 (36%), Gaps = 48/201 (23%)

Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQ-GAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           + G   L  AA  G +Q V  LL +     +A ++ G  ++     +G   I   LL++G
Sbjct: 1   RAGDR-LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQG 58

Query: 462 EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
              +V                           D +G + +H AA  G L  ++VL+  GA
Sbjct: 59  ASPNV--------------------------QDTSGTSPVHDAARTGFLDTLKVLVEHGA 92

Query: 522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK 581
           ++N  D                   G   +HLA   G+  +  FL    +  +     R 
Sbjct: 93  DVNVPDG-----------------TGALPIHLAVQEGHTAVVSFLAA-ESD-LHRRDARG 133

Query: 582 QTPLHLAAEAGQLQVCKLLLD 602
            TPL LA + G   +  +L  
Sbjct: 134 LTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  126 bits (319), Expect = 9e-34
 Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 23/165 (13%)

Query: 474 GHVTVV-GLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
           G V  V  LL         + ++ GKT L +    G   +   LL QGA  N  D     
Sbjct: 13  GDVQEVRRLLHRELVHP-DALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTS--- 67

Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                         G + +H AA  G+ D  + LV +H A +++       P+HLA + G
Sbjct: 68  --------------GTSPVHDAARTGFLDTLKVLV-EHGADVNVPDGTGALPIHLAVQEG 112

Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 637
              V   L    + +   D +G  P+ +A Q    ++    L+ H
Sbjct: 113 HTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVD-ILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  120 bits (304), Expect = 1e-31
 Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 5/157 (3%)

Query: 54  GRSALHLAAEHGYLKVCDALLT-HKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAA 112
               L  AA  G ++    LL       ++ +R G+TAL +    G   +   L+    A
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELL-KQGA 59

Query: 113 VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI 172
             ++      +P+H AA  G L   K+L++ GA ++  D  G  PIH+A Q     V   
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS- 118

Query: 173 FLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMK 209
           FL A    +      G T   +A  +G+  +++ L  
Sbjct: 119 FLAAESD-LHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  110 bits (278), Expect = 3e-28
 Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 3/128 (2%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           +     G T L +    G   +   +L   A  +V D  G S +H AA  G+L     L+
Sbjct: 30  DALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLV 88

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
            H A +N     G   +HLA   G+  +  FL    +  +     R  TPL LA + G  
Sbjct: 89  EHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESD-LHRRDARGLTPLELALQRGAQ 146

Query: 135 QVCKLLLD 142
            +  +L  
Sbjct: 147 DLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  109 bits (276), Expect = 5e-28
 Identities = 42/193 (21%), Positives = 71/193 (36%), Gaps = 42/193 (21%)

Query: 123 TPLHLAAEAGQLQ-VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
             L  AA  G +Q V +LL       DA +  G+  + V    +   +A   L    +  
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGS-TAIAL-ELLKQGASP 61

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
                 G +                                    P+  AA  G  + ++
Sbjct: 62  NVQDTSGTS------------------------------------PVHDAARTGFLDTLK 85

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYF 300
           VLV+ GA     + TG   +HLA Q GH  V+  + ++++ +++ +   G+T L +A   
Sbjct: 86  VLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL-AAES-DLHRRDARGLTPLELALQR 143

Query: 301 GQADTVRELLSHV 313
           G  D V  L  H+
Sbjct: 144 GAQDLVDILQGHM 156

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  107 bits (269), Expect = 4e-27
 Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 22/144 (15%)

Query: 495 KNGKTCLHIAATHGHLQMVEVLLGQ-GAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
           + G   L  AA  G +Q V  LL +     +A ++                  G+TAL +
Sbjct: 1   RAGDR-LSGAAARGDVQEVRRLLHRELVHPDALNRF-----------------GKTALQV 42

Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
               G   +   L+    A  ++      +P+H AA  G L   K+L++ GA ++  D  
Sbjct: 43  MM-FGSTAIALELL-KQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT 100

Query: 614 GQKPIHVAAQNNFPEVAQIFLRAH 637
           G  PIH+A Q     V   FL A 
Sbjct: 101 GALPIHLAVQEGHTAVVS-FLAAE 123

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 61.3 bits (150), Expect = 4e-11
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N     G  P+ +A   GH  +V+  L   + +   D  G + L LA + G   + D L 
Sbjct: 95  NVPDGTGALPIHLAVQEGHTAVVS-FLAAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

Query: 75  TH 76
            H
Sbjct: 154 GH 155

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  151 bits (384), Expect = 1e-42
 Identities = 51/197 (25%), Positives = 75/197 (38%), Gaps = 45/197 (22%)

Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 429
           +    L  A   G    V +L++  A    + D  G + LH+AA +GH    EVLL  G 
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPF--TTDWLGTSPLHLAAQYGHFSTTEVLLRAGV 58

Query: 430 EINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADL 489
             +A  K     +H AA  GH  I+  LL+ G  V+                        
Sbjct: 59  SRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVN------------------------ 94

Query: 490 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRT 549
             + D    T LH A  H H ++VE+L+  GA+++   K                   +T
Sbjct: 95  --AKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK-----------------FCKT 135

Query: 550 ALHLAAMNGYADLCRFL 566
           A  ++  NG  DL   L
Sbjct: 136 AFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  139 bits (353), Expect = 2e-38
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 2/152 (1%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
               LL A   G  + V  ++ N A     D  G S LHLAA++G+    + LL      
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           +++++V RT LH+AA  G+A++   L+  H A ++   + K T LH A E    +V +LL
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLL-KHGADVNAKDMLKMTALHWATEHNHQEVVELL 119

Query: 141 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQI 172
           +  GA +       +    ++  N   ++A+I
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEI 151

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  139 bits (353), Expect = 2e-38
 Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 45/197 (22%)

Query: 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
           +    L  AA  G    V +L+  GA     D  G   +H AA+YGH      LL+ G  
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 464 VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEI 523
            D                          +  K  +T LH+AA+ GH  +VEVLL  GA++
Sbjct: 60  RD--------------------------ARTKVDRTPLHMAASEGHANIVEVLLKHGADV 93

Query: 524 NATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQT 583
           NA D +                   TALH A  + + ++   L+  + A +   +   +T
Sbjct: 94  NAKDML-----------------KMTALHWATEHNHQEVVELLI-KYGADVHTQSKFCKT 135

Query: 584 PLHLAAEAGQLQVCKLL 600
              ++ + G   + ++L
Sbjct: 136 AFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  137 bits (347), Expect = 1e-37
 Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 20/160 (12%)

Query: 473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA 532
            G    V +L++  A    + D  G + LH+AA +GH    EVLL  G   +A  KV   
Sbjct: 12  AGQDDEVRILMANGAPF--TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV--- 66

Query: 533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
                          RT LH+AA  G+A++   L+  H A ++   + K T LH A E  
Sbjct: 67  --------------DRTPLHMAASEGHANIVEVLL-KHGADVNAKDMLKMTALHWATEHN 111

Query: 593 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI 632
             +V +LL+  GA +       +    ++  N   ++A+I
Sbjct: 112 HQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEI 151

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  125 bits (316), Expect = 2e-33
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 17/168 (10%)

Query: 257 GFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGT 316
               +  AA+ G +  +  + ++ A    +  LG + LH+AA +G   T   LL      
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGA-PFTTDWLGTSPLHLAAQYGHFSTTEVLLRA---- 56

Query: 317 VKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLH 376
                  G S   +  ++   TPLH+AA  G+ N+V +LL   G  V+A+        LH
Sbjct: 57  -------GVSR--DARTKVDRTPLHMAASEGHANIVEVLL-KHGADVNAKD-MLKMTALH 105

Query: 377 LACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
            A    H  VV LL+   AD + +  K  KT   I+  +G+  + E+L
Sbjct: 106 WATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  124 bits (313), Expect = 5e-33
 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 3/155 (1%)

Query: 53  EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAA 112
           +    L  AA  G       L+ + A       +G + LHLAA  G+      L+     
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLL-RAGV 58

Query: 113 VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI 172
             D  T   +TPLH+AA  G   + ++LL  GA ++A D      +H A ++N  EV + 
Sbjct: 59  SRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVE- 117

Query: 173 FLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL 207
            L  + + V   +K   T   I+   G+  + E L
Sbjct: 118 LLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  112 bits (283), Expect = 5e-29
 Identities = 46/188 (24%), Positives = 67/188 (35%), Gaps = 39/188 (20%)

Query: 87  GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146
               L  AA  G  D  R L+  + A          +PLHLAA+ G     ++LL  G S
Sbjct: 2   LGKKLLEAARAGQDDEVRILM-ANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 147 IDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEE 206
            DA     + P+H+AA      + ++ L  H + V A                       
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLL-KHGADVNAKDMLKM----------------- 101

Query: 207 LMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQ 266
                              T L  A E  H  VV +L+K GA    ++K   TA  ++  
Sbjct: 102 -------------------TALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISID 142

Query: 267 NGHNQVLE 274
           NG+  + E
Sbjct: 143 NGNEDLAE 150

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  109 bits (274), Expect = 8e-28
 Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 21/171 (12%)

Query: 187 DGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLVK 245
           D       AA  G    +  LM    +G   +        +PL LAA+ GH +   VL++
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMA---NGAPFTTDWL--GTSPLHLAAQYGHFSTTEVLLR 55

Query: 246 AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQAD 304
           AG S     K   T +H+AA  GH  ++E +    A +V +K  L +TALH A      +
Sbjct: 56  AGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGA-DVNAKDMLKMTALHWATEHNHQE 114

Query: 305 TVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLL 355
            V  L+ +           GA       S+   T   ++  +GNE++  +L
Sbjct: 115 VVELLIKY-----------GADV--HTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  109 bits (274), Expect = 9e-28
 Identities = 52/190 (27%), Positives = 77/190 (40%), Gaps = 41/190 (21%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
              L  AA AGQ    ++L+  GA     D  G  P+H+AAQ       ++ LR      
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLR-AGVSR 60

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
            A TK   T                                    PL +AA  GHAN+V 
Sbjct: 61  DARTKVDRT------------------------------------PLHMAASEGHANIVE 84

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYF 300
           VL+K GA    ++    TA+H A ++ H +V+E +    A +V+++ K   TA  ++   
Sbjct: 85  VLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA-DVHTQSKFCKTAFDISIDN 143

Query: 301 GQADTVRELL 310
           G  D   E+L
Sbjct: 144 GNEDLA-EIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 90.9 bits (227), Expect = 2e-21
 Identities = 29/92 (31%), Positives = 52/92 (56%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           + +T +  TPL +A + GH  +V  +L + A V+  D    +ALH A EH + +V + L+
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFL 106
            + A ++++S+  +TA  ++  NG  DL   L
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 81.7 bits (203), Expect = 3e-18
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 547 GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
               L  AA  G  D  R L+  + A          +PLHLAA+ G     ++LL  G S
Sbjct: 2   LGKKLLEAARAGQDDEVRILM-ANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 607 IDATDDQGQKPIHVAAQNNFPEVAQIFL 634
            DA     + P+H+AA      + ++ L
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLL 87

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  151 bits (383), Expect = 3e-42
 Identities = 48/188 (25%), Positives = 69/188 (36%), Gaps = 29/188 (15%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
                 L  AA +G+   V+ L     V            PLH A     V+VV  LL  
Sbjct: 6   SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIE-GRQSTPLHFAAGYNRVSVVEYLLQH 64

Query: 394 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGI 453
            AD + + DK G   LH A ++GH ++ E+L+  GA +N  D      +H AA  G   I
Sbjct: 65  GAD-VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEI 123

Query: 454 INTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 513
              LLQ G                                +++G T L +    G   + 
Sbjct: 124 CKLLLQHGADPTKK--------------------------NRDGNTPLDLVK-DGDTDIQ 156

Query: 514 EVLLGQGA 521
           ++L G  A
Sbjct: 157 DLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  145 bits (369), Expect = 2e-40
 Identities = 51/205 (24%), Positives = 76/205 (37%), Gaps = 45/205 (21%)

Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 428
                 L  A   G V  V  L +  +   +  +    T LH AA +  + +VE LL  G
Sbjct: 6   SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG 65

Query: 429 AEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAAD 488
           A+++A DKGG   +H A  YGH  +   L++ G  V+V                      
Sbjct: 66  ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVA--------------------- 104

Query: 489 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGR 548
                D    T LH AA  G  ++ ++LL  GA+    ++                  G 
Sbjct: 105 -----DLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR-----------------DGN 142

Query: 549 TALHLAAMNGYADLCRFLVHDHAAV 573
           T L L   +G  D+   L    AA+
Sbjct: 143 TPLDLVK-DGDTDIQDLLR-GDAAL 165

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  140 bits (357), Expect = 8e-39
 Identities = 49/205 (23%), Positives = 71/205 (34%), Gaps = 46/205 (22%)

Query: 402 DKNGKTCLHIAATHGHLQMVEVLL-GQGAEINATDKGGARSIHTAARYGHVGIINTLLQK 460
           +      L  AA  G ++ V+ L   Q       +   +  +H AA Y  V ++  LLQ 
Sbjct: 5   NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH 64

Query: 461 GEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 520
           G  V                             DK G   LH A ++GH ++ E+L+  G
Sbjct: 65  GADVHAK--------------------------DKGGLVPLHNACSYGHYEVAELLVKHG 98

Query: 521 AEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 580
           A +N  D                     T LH AA  G  ++C+ L+  H A        
Sbjct: 99  AVVNVADL-----------------WKFTPLHEAAAKGKYEICKLLL-QHGADPTKKNRD 140

Query: 581 KQTPLHLAAEAGQLQVCKLLLDLGA 605
             TPL L  + G   +  LL    A
Sbjct: 141 GNTPLDLVKD-GDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  136 bits (346), Expect = 3e-37
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 6/159 (3%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDV--FDQEGRSALHLAAEHGYLKVCDALLTHKA 78
               LL A   G +E V  +    + V+    +    + LH AA +  + V + LL H A
Sbjct: 8   ADRQLLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGA 66

Query: 79  FINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCK 138
            +++K + G   LH A   G+ ++   LV  H AV+++  L K TPLH AA  G+ ++CK
Sbjct: 67  DVHAKDKGGLVPLHNACSYGHYEVAELLV-KHGAVVNVADLWKFTPLHEAAAKGKYEICK 125

Query: 139 LLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 177
           LLL  GA     +  G  P+ +    +  ++    LR  
Sbjct: 126 LLLQHGADPTKKNRDGNTPLDLVKDGDT-DIQD-LLRGD 162

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  131 bits (333), Expect = 2e-35
 Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 48/210 (22%)

Query: 428 GAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAA 487
           GA  N       R +  AA+ G V                           V  L +  +
Sbjct: 1   GAMGN---SEADRQLLEAAKAGDVET-------------------------VKKLCTVQS 32

Query: 488 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVG 547
              +  +    T LH AA +  + +VE LL  GA+++A DK                  G
Sbjct: 33  VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG-----------------G 75

Query: 548 RTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI 607
              LH A   G+ ++   LV  H AV+++  L K TPLH AA  G+ ++CKLLL  GA  
Sbjct: 76  LVPLHNACSYGHYEVAELLV-KHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 134

Query: 608 DATDDQGQKPIHVAAQNNFPEVAQIFLRAH 637
              +  G  P+ +    +  ++    LR  
Sbjct: 135 TKKNRDGNTPLDLVKDGDT-DIQD-LLRGD 162

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  120 bits (303), Expect = 2e-31
 Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 10/172 (5%)

Query: 78  AFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVC 137
           A  NS+       L  AA  G  +  + L    +     +  R+ TPLH AA   ++ V 
Sbjct: 2   AMGNSE---ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVV 58

Query: 138 KLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAM 197
           + LL  GA + A D  G  P+H A      EVA++ +  H ++V        T  H AA 
Sbjct: 59  EYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLV-KHGAVVNVADLWKFTPLHEAAA 117

Query: 198 QGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLVKAGA 248
           +G   + + L++    G   + +NR    TPL L  + G  ++  +L    A
Sbjct: 118 KGKYEICKLLLQ---HGADPTKKNR-DGNTPLDLVKD-GDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  119 bits (300), Expect = 4e-31
 Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 4/158 (2%)

Query: 51  DQEGRSALHLAAEHGYLKVCDALLTHKAF-INSKSRVGRTALHLAAMNGYADLCRFLVHD 109
           + E    L  AA+ G ++    L T ++           T LH AA      +  +L+  
Sbjct: 5   NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL-Q 63

Query: 110 HAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEV 169
           H A +         PLH A   G  +V +LL+  GA ++  D     P+H AA     E+
Sbjct: 64  HGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEI 123

Query: 170 AQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL 207
            ++ L+ H +  T   +DGNT   +    G   + + L
Sbjct: 124 CKLLLQ-HGADPTKKNRDGNTPLDLVK-DGDTDIQDLL 159

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  107 bits (271), Expect = 3e-27
 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 2/131 (1%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
                   TPL  A     + +V  +L + A V   D+ G   LH A  +G+ +V + L+
Sbjct: 36  RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLV 95

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
            H A +N       T LH AA  G  ++C+ L+  H A          TPL L  + G  
Sbjct: 96  KHGAVVNVADLWKFTPLHEAAAKGKYEICKLLL-QHGADPTKKNRDGNTPLDLVKD-GDT 153

Query: 135 QVCKLLLDLGA 145
            +  LL    A
Sbjct: 154 DIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  104 bits (262), Expect = 6e-26
 Identities = 44/193 (22%), Positives = 64/193 (33%), Gaps = 41/193 (21%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDL-GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
              L  AA+AG ++  K L  +   +    + +   P+H AA  N   V +  L  H + 
Sbjct: 9   DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL-QHGAD 67

Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
           V A  K G                                      PL  A   GH  V 
Sbjct: 68  VHAKDKGGLV------------------------------------PLHNACSYGHYEVA 91

Query: 241 RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAY 299
            +LVK GA     +   FT +H AA  G  ++ + +    A +   K + G T L +   
Sbjct: 92  ELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA-DPTKKNRDGNTPLDLVKD 150

Query: 300 FGQADTVRELLSH 312
            G  D    L   
Sbjct: 151 -GDTDIQDLLRGD 162

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  150 bits (381), Expect = 2e-41
 Identities = 47/260 (18%), Positives = 84/260 (32%), Gaps = 51/260 (19%)

Query: 387 VGLLLSRAADLLQSADK---NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIH 443
           +  +L +A    + A +   N    L  AA  G L++V+  + +  + +  ++ G  ++H
Sbjct: 1   MRSVLRKAGSP-RKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALH 59

Query: 444 TAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHI 503
            A    +  I++ L+  G  V+                          S D +G T LH 
Sbjct: 60  NAICGANYSIVDFLITAGANVN--------------------------SPDSHGWTPLHC 93

Query: 504 AATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM--NGYAD 561
           AA+     +   L+  GA I AT                    G TA         GYAD
Sbjct: 94  AASCNDTVICMALVQHGAAIFATTL----------------SDGATAFEKCDPYREGYAD 137

Query: 562 LCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 621
              +L  D    + ++       L   + A              ++   D   +     A
Sbjct: 138 CATYLA-DVEQSMGLMNSGAVYALWDYS-AEFGDELSFREGESVTVLRRDGPEETDWWWA 195

Query: 622 AQNNFPE-VAQIFLRAHPSL 640
           A +     V + +    P +
Sbjct: 196 ALHGQEGYVPRNYFGLFPRV 215

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  146 bits (370), Expect = 9e-40
 Identities = 44/275 (16%), Positives = 76/275 (27%), Gaps = 55/275 (20%)

Query: 352 VRLLLNSAGVQVDAQTQE--NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
           +R +L           +   N    L  A   G + VV   +    D     ++ G T L
Sbjct: 1   MRSVL-RKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITAL 58

Query: 410 HIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
           H A    +  +V+ L+  GA +N+ D  G   +H AA                       
Sbjct: 59  HNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAAS---------------------- 96

Query: 470 NLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH--GHLQMVEVLLGQGAEINATD 527
              C    +   L+   A +  +   +G T       +  G+      L      +   +
Sbjct: 97  ---CNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN 153

Query: 528 KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK--QTPL 585
                                 AL   +   + D   F        + +L      +T  
Sbjct: 154 S-----------------GAVYALWDYS-AEFGDELSFR---EGESVTVLRRDGPEETDW 192

Query: 586 HLAAEAGQLQ-VCKLLLDLGASIDATDDQGQKPIH 619
             AA  GQ   V +    L   +     + +   H
Sbjct: 193 WWAALHGQEGYVPRNYFGLFPRVKPQRSKVKHHHH 227

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  140 bits (354), Expect = 1e-37
 Identities = 37/221 (16%), Positives = 68/221 (30%), Gaps = 23/221 (10%)

Query: 240 VRVLVKAGASCTDENK---TGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALH 295
           +R +++   S     +        +  AA  G  +V+++       +     + G+TALH
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMN-DPSQPNEEGITALH 59

Query: 296 VAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLL 355
            A        V  L++            GA+         G TPLH AA   +  +   L
Sbjct: 60  NAICGANYSIVDFLITA-----------GANV--NSPDSHGWTPLHCAASCNDTVICMAL 106

Query: 356 LNSAGVQVDAQTQENGYNPLHLA--CFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAA 413
           +   G  + A T  +G            G+      L       +   +      L   +
Sbjct: 107 V-QHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQS-MGLMNSGAVYALWDYS 164

Query: 414 THGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGII 454
                + +    G+   +   D         AA +G  G +
Sbjct: 165 AEFGDE-LSFREGESVTVLRRDGPEETDWWWAALHGQEGYV 204

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  134 bits (340), Expect = 8e-36
 Identities = 45/194 (23%), Positives = 65/194 (33%), Gaps = 6/194 (3%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
            +        LL A   G +E+V   +         ++EG +ALH A       + D L+
Sbjct: 15  RRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLI 74

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK-QTPLHLAAEA-- 131
           T  A +NS    G T LH AA      +C  LV  H A I   TL    T          
Sbjct: 75  TAGANVNSPDSHGWTPLHCAASCNDTVICMALV-QHGAAIFATTLSDGATAFEKCDPYRE 133

Query: 132 GQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTC 191
           G       L D+  S+   +      +   +     E++  F       V        T 
Sbjct: 134 GYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELS--FREGESVTVLRRDGPEETD 191

Query: 192 AHIAAMQGSVGVIE 205
              AA+ G  G + 
Sbjct: 192 WWWAALHGQEGYVP 205

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  121 bits (305), Expect = 4e-31
 Identities = 35/229 (15%), Positives = 57/229 (24%), Gaps = 42/229 (18%)

Query: 47  VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 106
                      L  AA  G L+V    +      +  +  G TALH A       +  FL
Sbjct: 14  ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFL 73

Query: 107 VHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ-GQKPIHVAA--Q 163
           +    A ++       TPLH AA      +C  L+  GA+I AT    G          +
Sbjct: 74  I-TAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYR 132

Query: 164 NNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVT 223
             + + A  +L      +              +                           
Sbjct: 133 EGYADCAT-YLADVEQSMGLMNSGAVYALWDYSA-------------------------- 165

Query: 224 EATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQV 272
                         + +        +    +    T    AA +G    
Sbjct: 166 -----------EFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGY 203

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  110 bits (278), Expect = 2e-27
 Identities = 41/279 (14%), Positives = 70/279 (25%), Gaps = 59/279 (21%)

Query: 138 KLLLDLGASIDATDDQGQKPI---HVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHI 194
           + +L    S          P+     AA     EV Q  +    +  +   ++G T    
Sbjct: 2   RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAV-KEMNDPSQPNEEGIT---- 56

Query: 195 AAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDEN 254
                                            L  A  G + ++V  L+ AGA+    +
Sbjct: 57  --------------------------------ALHNAICGANYSIVDFLITAGANVNSPD 84

Query: 255 KTGFTAVHLAAQNGHNQVLEEMRSSKA-LNVYSKKLGVTALHVAAYF--GQADTVRELLS 311
             G+T +H AA      +   +    A +   +   G TA      +  G AD    L  
Sbjct: 85  SHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLAD 144

Query: 312 HVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENG 371
                         S    L +   +  L   +    + +         V V  +     
Sbjct: 145 V-----------EQSM--GLMNSGAVYALWDYSAEFGDEL--SFREGESVTVLRR-DGPE 188

Query: 372 YNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLH 410
                 A   G    V          ++      K   H
Sbjct: 189 ETDWWWAALHGQEGYVPRNYFGLFPRVKPQRSKVKHHHH 227

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  151 bits (384), Expect = 4e-41
 Identities = 50/288 (17%), Positives = 78/288 (27%), Gaps = 65/288 (22%)

Query: 338 TPLHLAAYSGNENVVRLLLN------SAGVQVDAQTQENGYNPLHLACF---GGHVTVVG 388
             +  A    N   +  LL             + +  E G   L  A      G    + 
Sbjct: 15  RSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIA 74

Query: 389 LLLSRAADL----------LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGG 438
           LLL  A                +   G+T LHIA    ++ +V +L+  GA++ A   G 
Sbjct: 75  LLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGD 134

Query: 439 ARS--------------IHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLS 484
                            +  AA    + I+  LLQ                         
Sbjct: 135 FFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS----------------------W 172

Query: 485 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKS 544
           + AD + + D  G T LH         +                    L          +
Sbjct: 173 QPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK-LHPTLKLEEITN 230

Query: 545 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 592
           R G T L LAA +G   +  +++             +    H AA   
Sbjct: 231 RKGLTPLALAASSGKIGVLAYILQREI--------HEPECRHAAAHHH 270

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  151 bits (382), Expect = 6e-41
 Identities = 62/330 (18%), Positives = 97/330 (29%), Gaps = 72/330 (21%)

Query: 246 AGASCTDENKTGFTAVHLAAQNGHNQVLEE-----MRSSKAL---NVYSKKLGVTALHVA 297
             A           ++  A    + Q LE       RS K L        + G T L  A
Sbjct: 2   VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKA 61

Query: 298 ---AYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRL 354
               + GQ DT+  LL     T        AS+        G T LH+A    N  +V L
Sbjct: 62  MLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYK--GQTALHIAIERRNMTLVTL 119

Query: 355 LLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT 414
           L+   G  V A      +        G +                     G+  L +AA 
Sbjct: 120 LV-ENGADVQAAA-NGDFFKKTKGRPGFY--------------------FGELPLSLAAC 157

Query: 415 HGHLQMVEVLLGQG---AEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNL 471
              L +V+ LL      A+I+A D  G   +H         + NT             ++
Sbjct: 158 TNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKF---------VTSM 208

Query: 472 ACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCD 531
               + +   L           ++ G T L +AA+ G + ++  +L +            
Sbjct: 209 YNEILILGAKLHPTLKLEE-ITNRKGLTPLALAASSGKIGVLAYILQREIH--------- 258

Query: 532 ALLTHKAFINSKSRVGRTALHLAAMNGYAD 561
                               H AA + +  
Sbjct: 259 ---------------EPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  134 bits (339), Expect = 3e-35
 Identities = 50/266 (18%), Positives = 83/266 (31%), Gaps = 50/266 (18%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTD--------ENKTGFTAVHLA---AQNGHNQVLE 274
             +  A    +   +  L+                + +TG T +  A     NG N  + 
Sbjct: 15  RSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIA 74

Query: 275 EMRSSKALNVYSKKL-----------GVTALHVAAYFGQADTVRELLSHVPG---TVKSD 320
            +          K+            G TALH+A        V  L+ +  G      ++
Sbjct: 75  LLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN--GADVQAAAN 132

Query: 321 PPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQ-ENGYNPLHLAC 379
                   G  G   G  PL LAA +    +V+ LL ++    D   +   G   LH   
Sbjct: 133 GDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALV 192

Query: 380 FGGHVTVV---------GLLLSRAADLLQSA------DKNGKTCLHIAATHGHLQMVEVL 424
                TV            +L   A L  +       ++ G T L +AA+ G + ++  +
Sbjct: 193 EVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYI 252

Query: 425 LGQGAEINATDKGGARSIHTAARYGH 450
           L +               H AA + H
Sbjct: 253 LQREIHEPEC-------RHAAAHHHH 271

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  130 bits (329), Expect = 7e-34
 Identities = 55/295 (18%), Positives = 90/295 (30%), Gaps = 66/295 (22%)

Query: 45  ARVDVFDQEGRSALHLAAEHGYLKVCDALL-------THKAFINSKSR-VGRTALHLAAM 96
           A         R ++  A      +  ++LL               K    G+T L  A +
Sbjct: 4   AGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAML 63

Query: 97  N---GYADLCRFLVHDHAAVIDILTL-----------RKQTPLHLAAEAGQLQVCKLLLD 142
           N   G  D    L+ D A   D L             + QT LH+A E   + +  LL++
Sbjct: 64  NLHNGQNDTIALLL-DVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVE 122

Query: 143 LGASIDATDD--------------QGQKPIHVAAQNNFPEVAQIFLR--AHPSLVTATTK 186
            GA + A  +               G+ P+ +AA  N   + +  L+    P+ ++A   
Sbjct: 123 NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDS 182

Query: 187 DGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKA 246
            GNT  H                          +   + T    +       +   L   
Sbjct: 183 VGNTVLHALVEVA--------------------DNTVDNTKFVTSMYNEILILGAKLHPT 222

Query: 247 GASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFG 301
                  N+ G T + LAA +G   VL  +   +              H AA+  
Sbjct: 223 LKLEEITNRKGLTPLALAASSGKIGVLAYILQREI-------HEPECRHAAAHHH 270

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  119 bits (299), Expect = 6e-30
 Identities = 54/271 (19%), Positives = 85/271 (31%), Gaps = 65/271 (23%)

Query: 16  KQTSIGWTPLLIA---CNRGHMELVNTMLNNHARVDVF-----------DQEGRSALHLA 61
           K    G T LL A    + G  + +  +L+   + D               +G++ALH+A
Sbjct: 49  KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIA 108

Query: 62  AEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK 121
            E   + +   L+ + A + + +              Y                      
Sbjct: 109 IERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFY--------------------FG 148

Query: 122 QTPLHLAAEAGQLQVCKLLLDLG---ASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHP 178
           + PL LAA   QL + K LL      A I A D  G   +H   +     V         
Sbjct: 149 ELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKF---- 204

Query: 179 SLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHAN 238
                 T   N    + A       +EE+   +R G+          TPL LAA  G   
Sbjct: 205 -----VTSMYNEILILGAKLHPTLKLEEIT--NRKGL----------TPLALAASSGKIG 247

Query: 239 VVRVLVKAGASCTDENKTGFTAVHLAAQNGH 269
           V+  +++                H AA + H
Sbjct: 248 VLAYILQREIH-------EPECRHAAAHHHH 271

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  103 bits (259), Expect = 1e-24
 Identities = 41/202 (20%), Positives = 59/202 (29%), Gaps = 43/202 (21%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQE--------------GRSALHL 60
                 G T L IA  R +M LV  ++ N A V                    G   L L
Sbjct: 95  TDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSL 154

Query: 61  AAEHGYLKVCDALLTH---KAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 117
           AA    L +   LL +    A I+++  VG T LH                +        
Sbjct: 155 AACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVA---------DNTVD----- 200

Query: 118 TLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 177
                T    +     L +   L       + T+ +G  P+ +AA +    V    L+  
Sbjct: 201 ----NTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQRE 256

Query: 178 PSLVTATTKDGNTCAHIAAMQG 199
                        C H AA   
Sbjct: 257 --------IHEPECRHAAAHHH 270

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 90.2 bits (224), Expect = 6e-20
 Identities = 47/287 (16%), Positives = 84/287 (29%), Gaps = 85/287 (29%)

Query: 428 GAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAA 487
            A          RSI  A    +   + +LL                    +     R  
Sbjct: 3   SAGEKPPRLYDRRSIFDAVAQSNCQELESLLP------------------FLQRSKKRLT 44

Query: 488 DLLQSADKNGKTCLHIA---ATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKS 544
           D      + GKTCL  A     +G    + +LL    + ++  +  +A  T   +     
Sbjct: 45  DSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYY----- 99

Query: 545 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 604
                                              + QT LH+A E   + +  LL++ G
Sbjct: 100 -----------------------------------KGQTALHIAIERRNMTLVTLLVENG 124

Query: 605 ASIDATDD--------------QGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEK-- 648
           A + A  +               G+ P+ +AA  N   + +  L+        + ++   
Sbjct: 125 ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVG 184

Query: 649 --------ERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDR 687
                   E A + +   K    M  E+L L A      ++   T+R
Sbjct: 185 NTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNR 231

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 77.1 bits (190), Expect = 1e-15
 Identities = 28/163 (17%), Positives = 49/163 (30%), Gaps = 28/163 (17%)

Query: 6   SGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNN---HARVDVFDQEGRSALHLAA 62
                          G  PL +A     + +V  +L N    A +   D  G + LH   
Sbjct: 133 GDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALV 192

Query: 63  EHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ 122
           E     V +       +           + +             +H    + +I   +  
Sbjct: 193 EVADNTVDNTKFVTSMY---------NEILILGAK---------LHPTLKLEEITNRKGL 234

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN 165
           TPL LAA +G++ V   +L              +  H AA ++
Sbjct: 235 TPLALAASSGKIGVLAYILQREI-------HEPECRHAAAHHH 270

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 66.3 bits (162), Expect = 6e-12
 Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 23/104 (22%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTML----------------NNHARVDVFDQEGRSA 57
           ++ + S+G T L          + NT                        ++ +++G + 
Sbjct: 177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTP 236

Query: 58  LHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD 101
           L LAA  G + V   +L  +              H AA + +  
Sbjct: 237 LALAASSGKIGVLAYILQREIH-------EPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 57.9 bits (140), Expect = 4e-09
 Identities = 21/122 (17%), Positives = 35/122 (28%), Gaps = 21/122 (17%)

Query: 535 THKAFINSKSRVGRTALHLAAMNGYAD----LCRFLVHDHAAVIDILTLRK---QTPLHL 587
           +  A         R ++  A           L  FL      + D         +T L  
Sbjct: 1   SVSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLK 60

Query: 588 A---AEAGQLQVCKLLLDLGASIDAT-----------DDQGQKPIHVAAQNNFPEVAQIF 633
           A      GQ     LLLD+    D+              +GQ  +H+A +     +  + 
Sbjct: 61  AMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLL 120

Query: 634 LR 635
           + 
Sbjct: 121 VE 122

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  146 bits (371), Expect = 7e-41
 Identities = 42/182 (23%), Positives = 54/182 (29%), Gaps = 36/182 (19%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
           E     L  AA  G    VR LL  AG   +A     G  P+ +   G    V  LLL  
Sbjct: 10  EPSADWLATAAARGRVEEVRALL-EAGANPNAPN-SYGRRPIQVMMMG-SARVAELLLLH 66

Query: 394 AADLLQSADKNGKTC-LHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452
            A+    AD    T  +H AA  G L  + VL   GA ++  D  G   +  A   GH  
Sbjct: 67  GAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD 125

Query: 453 IINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 512
           +   L                                       G     I A  G   +
Sbjct: 126 VARYLRAAA-------------------------------GGTRGSNHARIDAAEGPSDI 154

Query: 513 VE 514
            +
Sbjct: 155 PD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  136 bits (345), Expect = 3e-37
 Identities = 35/168 (20%), Positives = 55/168 (32%), Gaps = 21/168 (12%)

Query: 286 SKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAY 345
           S +     L  AA  G+ + VR LL             GA+      +  G  P+ +   
Sbjct: 8   SMEPSADWLATAAARGRVEEVRALLEA-----------GANP--NAPNSYGRRPIQVMMM 54

Query: 346 SGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNG 405
            G+  V  LLL   G + +         P+H A   G +  + +L    A  L   D  G
Sbjct: 55  -GSARVAELLL-LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWG 111

Query: 406 KTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGI 453
           +  + +A   GH  +   L         ++          A  G   I
Sbjct: 112 RLPVDLAEELGHRDVARYLRAAAGGTRGSNHA-----RIDAAEGPSDI 154

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  134 bits (341), Expect = 9e-37
 Identities = 44/196 (22%), Positives = 59/196 (30%), Gaps = 51/196 (26%)

Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
            +     L  AA  G ++ V  LL  GA  NA +  G R I                   
Sbjct: 9   MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-------------- 54

Query: 462 EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTC-LHIAATHGHLQMVEVLLGQG 520
                       G   V  LLL   A+    AD    T  +H AA  G L  + VL   G
Sbjct: 55  ------------GSARVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRAG 101

Query: 521 AEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 580
           A ++  D                   GR  + LA   G+ D+ R+L    A         
Sbjct: 102 ARLDVRDA-----------------WGRLPVDLAEELGHRDVARYLR-AAAGGTR----- 138

Query: 581 KQTPLHLAAEAGQLQV 596
                 + A  G   +
Sbjct: 139 GSNHARIDAAEGPSDI 154

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  128 bits (324), Expect = 2e-34
 Identities = 35/162 (21%), Positives = 56/162 (34%), Gaps = 8/162 (4%)

Query: 10  ISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKV 69
           +  A           L  A  RG +E V  +L   A  +  +  GR  + +    G  +V
Sbjct: 1   MEPAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARV 59

Query: 70  CDALLTHKAFINSKSRVGRT-ALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLA 128
            + LL H A  N       T  +H AA  G+ D    L     A +D+     + P+ LA
Sbjct: 60  AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLH-RAGARLDVRDAWGRLPVDLA 118

Query: 129 AEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA 170
            E G   V + L         ++        + A     ++ 
Sbjct: 119 EELGHRDVARYLRAAAGGTRGSN-----HARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  121 bits (306), Expect = 5e-32
 Identities = 39/181 (21%), Positives = 62/181 (34%), Gaps = 27/181 (14%)

Query: 244 VKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQ 302
           ++  A  + E       +  AA  G  + +  +  + A N  +    G   + V    G 
Sbjct: 1   MEPAAGSSMEP--SADWLATAAARGRVEEVRALLEAGA-NPNAPNSYGRRPIQVMMM-GS 56

Query: 303 ADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMT-PLHLAAYSGNENVVRLLLNSAGV 361
           A     LL H           GA         + +T P+H AA  G  + + +L   AG 
Sbjct: 57  ARVAELLLLH-----------GAEP--NCADPATLTRPVHDAAREGFLDTLVVLH-RAGA 102

Query: 362 QVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 421
           ++D +    G  P+ LA   GH  V   L + A          G     I A  G   + 
Sbjct: 103 RLDVRD-AWGRLPVDLAEELGHRDVARYLRAAAGG------TRGSNHARIDAAEGPSDIP 155

Query: 422 E 422
           +
Sbjct: 156 D 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  117 bits (296), Expect = 1e-30
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 9/162 (5%)

Query: 45  ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCR 104
                  +     L  AA  G ++   ALL   A  N+ +  GR  + +  M G A +  
Sbjct: 3   PAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAE 61

Query: 105 FLVHDHAAVIDILTLRKQT-PLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQ 163
            L+  H A  +       T P+H AA  G L    +L   GA +D  D  G+ P+ +A +
Sbjct: 62  LLL-LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEE 120

Query: 164 NNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIE 205
               +VA+ +LRA       +         I A +G   + +
Sbjct: 121 LGHRDVAR-YLRAAAGGTRGSNHA-----RIDAAEGPSDIPD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  115 bits (291), Expect = 5e-30
 Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 20/142 (14%)

Query: 494 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
            +     L  AA  G ++ V  LL  GA  NA +                   GR  + +
Sbjct: 9   MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSY-----------------GRRPIQV 51

Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQT-PLHLAAEAGQLQVCKLLLDLGASIDATDD 612
             M G A +   L+  H A  +       T P+H AA  G L    +L   GA +D  D 
Sbjct: 52  MMM-GSARVAELLL-LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDA 109

Query: 613 QGQKPIHVAAQNNFPEVAQIFL 634
            G+ P+ +A +    +VA+   
Sbjct: 110 WGRLPVDLAEELGHRDVARYLR 131

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  112 bits (284), Expect = 3e-29
 Identities = 39/186 (20%), Positives = 64/186 (34%), Gaps = 42/186 (22%)

Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
               L  AA  G+++  + LL+ GA+ +A +  G++PI V    +   VA++ L  H + 
Sbjct: 12  SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSA-RVAELLL-LHGAE 69

Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
                    T                                    P+  AA  G  + +
Sbjct: 70  PNCADPATLT-----------------------------------RPVHDAAREGFLDTL 94

Query: 241 RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
            VL +AGA     +  G   V LA + GH  V   +R++          G     + A  
Sbjct: 95  VVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAG-GTR----GSNHARIDAAE 149

Query: 301 GQADTV 306
           G +D  
Sbjct: 150 GPSDIP 155

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  153 bits (387), Expect = 2e-40
 Identities = 54/315 (17%), Positives = 87/315 (27%), Gaps = 51/315 (16%)

Query: 338 TPLHLAAYSGNEN---VVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRA 394
               +AA +G  +    + LLL ++   V        Y    LA   GH+ V+  L   A
Sbjct: 94  VICFVAAITGCSSALDTLCLLL-TSDEIVKVIQ-AENYQAFRLAAENGHLHVLNRLCELA 151

Query: 395 ADLLQS-ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD--KGGARSIHTAA-RYGH 450
              + +           +AA +GHL ++  L                  +   AA   GH
Sbjct: 152 PTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH 211

Query: 451 VGIINTLLQKGEKVDVTTNNLAC-GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGH 509
             +IN LL     +     +    G   V   +      L     K       ++   G 
Sbjct: 212 HNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRL-----KEMHDAFKLSNPDGV 266

Query: 510 LQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG---YADLCRFL 566
             +V                            S+   G   L            D  RFL
Sbjct: 267 FDLVT--------------------------KSECLQGFYMLRNLIRRNDEVLLDDIRFL 300

Query: 567 VH----DHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAA 622
           +        A    +       L LA   G    C LLL + + +  T        ++  
Sbjct: 301 LSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTK---ANNYYINE 357

Query: 623 QNNFPEVAQIFLRAH 637
                ++  + L  H
Sbjct: 358 TGGRLDLRAVALEHH 372

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  152 bits (384), Expect = 3e-40
 Identities = 56/376 (14%), Positives = 112/376 (29%), Gaps = 52/376 (13%)

Query: 232 AEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGV 291
               +   + + +    +   E       ++ A  N + + L      K +         
Sbjct: 42  MTLSYKEAIHIFLPGTKN--MEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSE------ 93

Query: 292 TALHVAAYFGQA---DTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGN 348
               VAA  G +   DT+  LL+                + ++          LAA +G+
Sbjct: 94  VICFVAAITGCSSALDTLCLLLTS-----------DE--IVKVIQAENYQAFRLAAENGH 140

Query: 349 ENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQS-ADKNGKT 407
            +V+  L   A  ++ A  Q   Y+   LA   GH+ V+  L   A     +        
Sbjct: 141 LHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYY 200

Query: 408 CLHIAAT-HGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDV 466
               AA   GH  ++  LL     +   +            YG   +   + +   ++  
Sbjct: 201 AFRWAAVGRGHHNVINFLLDCPVMLAYAEIH-------EFEYGEKYVNPFIARHVNRLKE 253

Query: 467 TTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT 526
             +     +   V  L+++      S    G   L          +++ +          
Sbjct: 254 MHDAFKLSNPDGVFDLVTK------SECLQGFYMLRNLIRRNDEVLLDDI---------R 298

Query: 527 DKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLH 586
             +    +   A   +        L LA   G    C  L+   +    +L L K    +
Sbjct: 299 FLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPS----VLALTKANNYY 354

Query: 587 LAAEAGQLQVCKLLLD 602
           +    G+L +  + L+
Sbjct: 355 INETGGRLDLRAVALE 370

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  140 bits (354), Expect = 3e-36
 Identities = 48/353 (13%), Positives = 91/353 (25%), Gaps = 57/353 (16%)

Query: 230 LAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMR---SSKALNVYS 286
           L     H N     + + A    +         +AA  G +  L+ +    +S  +    
Sbjct: 67  LCLYYAHYNRNAKQLWSDA--HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVI 124

Query: 287 KKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYS 346
           +     A  +AA  G    +  L    P  + +                      LAA +
Sbjct: 125 QAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI-----------QAENYHAFRLAAEN 173

Query: 347 GNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFG-GHVTVVGLLLSRAADLLQSADKNG 405
           G+ +V+  L   A  +  A  Q   Y     A  G GH  V+  LL     L        
Sbjct: 174 GHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVML-------- 225

Query: 406 KTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVD 465
                    +G   +   +      +         +   +   G   ++           
Sbjct: 226 AYAEIHEFEYGEKYVNPFIARHVNRLKEMHD----AFKLSNPDGVFDLVTKSECLQGFYM 281

Query: 466 VTTNNLACGHVTVVGLL--LSRAADLLQSA-----DKNGKTCLHIAATHGHLQMVEVLLG 518
           +  N +      ++  +  L     +   A       +    L +A   G+     +LL 
Sbjct: 282 LR-NLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS 340

Query: 519 QGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHA 571
             + +  T                         ++    G  DL    +  H 
Sbjct: 341 IPSVLALTKA--------------------NNYYINETGGRLDLRAVALEHHH 373

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  134 bits (339), Expect = 3e-34
 Identities = 60/363 (16%), Positives = 105/363 (28%), Gaps = 50/363 (13%)

Query: 77  KAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ--- 133
             F+     + +    L     + +     +   A    I   + +    +AA  G    
Sbjct: 51  HIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGI---KSEVICFVAAITGCSSA 107

Query: 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTAT-TKDGNTCA 192
           L    LLL     +     +  +   +AA+N    V        P+ + A    +     
Sbjct: 108 LDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAF 167

Query: 193 HIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD 252
            +AA  G + V+  L +   +   +             A   GH NV+  L+        
Sbjct: 168 RLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAY 227

Query: 253 ENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSH 312
                  A     + G   V      +  +  +     +  +H A      D V +L++ 
Sbjct: 228 -------AEIHEFEYGEKYV------NPFIARHVN--RLKEMHDAFKLSNPDGVFDLVTK 272

Query: 313 VPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNEN---VVRLLLNSAGVQVDAQ--- 366
                                  G   L       +E     +R LL+  G++  A    
Sbjct: 273 SEC------------------LQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTAT 314

Query: 367 TQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLG 426
              +    L LA   G+     LLLS  + L  +   N     +I  T G L +  V L 
Sbjct: 315 IPGDANELLRLALRLGNQGACALLLSIPSVLALTKANN----YYINETGGRLDLRAVALE 370

Query: 427 QGA 429
              
Sbjct: 371 HHH 373

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  132 bits (333), Expect = 2e-33
 Identities = 48/329 (14%), Positives = 79/329 (24%), Gaps = 82/329 (24%)

Query: 226 TPLQLAAEGGHAN---VVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKAL 282
               +AA  G ++    + +L+ +           + A  LAA+NGH  VL  +      
Sbjct: 94  VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT 153

Query: 283 NVYSKKL--GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPL 340
            + +        A  +AA  G    +  L    P    +                     
Sbjct: 154 EIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMI-----------QAENYYAF 202

Query: 341 HLAAYS-GNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQ 399
             AA   G+ NV+  LL    V +                  G   V   +      L +
Sbjct: 203 RWAAVGRGHHNVINFLL-DCPVMLAYA--------EIHEFEYGEKYVNPFIARHVNRLKE 253

Query: 400 -------------------SADKNGKTCLHIAATHGHLQMVEVL--------LGQGAEIN 432
                              S    G   L          +++ +        +   A   
Sbjct: 254 MHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTA 313

Query: 433 ATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQS 492
                    +  A R G+ G    LL     + +T  N                      
Sbjct: 314 TIPGDANELLRLALRLGNQGACALLLSIPSVLALTKAN---------------------- 351

Query: 493 ADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
                    +I  T G L +  V L    
Sbjct: 352 -------NYYINETGGRLDLRAVALEHHH 373

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  128 bits (323), Expect = 3e-32
 Identities = 47/319 (14%), Positives = 89/319 (27%), Gaps = 42/319 (13%)

Query: 9   EISKALNKQTSIGWTPLLIAC---NRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHG 65
           ++    +K+         +A        ++ +  +L +   V V   E   A  LAAE+G
Sbjct: 80  QLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG 139

Query: 66  YLKVCDALLTHKAFINS--KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDI-LTLRKQ 122
           +L V + L                  A  LAA NG+  +   L           +     
Sbjct: 140 HLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENY 199

Query: 123 TPLHLAA-EAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
                AA   G   V   LLD    +   +           +     V   F+  H    
Sbjct: 200 YAFRWAAVGRGHHNVINFLLDCPVMLAYAEIH-------EFEYGEKYVNP-FIARHV--- 248

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
               K+ +    ++   G   ++                 +     L+         ++ 
Sbjct: 249 -NRLKEMHDAFKLSNPDGVFDLVT------------KSECLQGFYMLRNLIRRNDEVLLD 295

Query: 242 VL--------VKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTA 293
            +        +KA A            + LA + G+      + S  ++   +K      
Sbjct: 296 DIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKA---NN 352

Query: 294 LHVAAYFGQADTVRELLSH 312
            ++    G+ D     L H
Sbjct: 353 YYINETGGRLDLRAVALEH 371

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 85.0 bits (210), Expect = 1e-17
 Identities = 34/207 (16%), Positives = 51/207 (24%), Gaps = 29/207 (14%)

Query: 446 ARYGHVGIINTLLQKGEKVDVTTNNLA--CGHVTVVGLLLSRAADLLQSADKNGKTCLHI 503
               +   I+  L   + ++     L     H       L              +    +
Sbjct: 42  MTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLW---SDAHKKGIKSEVICFV 98

Query: 504 AATHGH---LQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA 560
           AA  G    L  + +LL     +                          A  LAA NG+ 
Sbjct: 99  AAITGCSSALDTLCLLLTSDEIVKVIQAE-----------------NYQAFRLAAENGHL 141

Query: 561 DLCRFLVHDHAAVIDILTLRK-QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK--- 616
            +   L       I  +   +      LAAE G L V   L +L  +      Q +    
Sbjct: 142 HVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYA 201

Query: 617 PIHVAAQNNFPEVAQIFLRAHPSLVTA 643
               A       V    L     L  A
Sbjct: 202 FRWAAVGRGHHNVINFLLDCPVMLAYA 228

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 67.3 bits (164), Expect = 8e-12
 Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 14/166 (8%)

Query: 508 GHLQMVEVLLGQGAEINATDKVCDALLTHK--------AFINSKSRVGRTALHLAAMNGY 559
            + + + + L     +    ++      H         +  + K         +AA+ G 
Sbjct: 45  SYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGC 104

Query: 560 A---DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD--DQG 614
           +   D    L+     ++ ++         LAAE G L V   L +L  +        + 
Sbjct: 105 SSALDTLCLLL-TSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN 163

Query: 615 QKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKH 660
                +AA+N    V        P+  TA  + +       AA   
Sbjct: 164 YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGR 209

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 8/64 (12%), Positives = 18/64 (28%), Gaps = 3/64 (4%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
                     L +A   G+      +L+  + + +         ++    G L +    L
Sbjct: 313 ATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKANN---YYINETGGRLDLRAVAL 369

Query: 75  THKA 78
            H  
Sbjct: 370 EHHH 373

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  146 bits (371), Expect = 1e-39
 Identities = 57/301 (18%), Positives = 93/301 (30%), Gaps = 70/301 (23%)

Query: 336 GMTPLHLAAYSGNENVVRLLL-----NSAGVQVDAQTQ-ENGYNPLHLA---CFGGHVTV 386
               L      G    +  LL     NS  +   A T+   G   L  A      G    
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 387 VGLLLSRAADL----------LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK 436
           +  LL    D                  G + LHIA     LQ V++L+  GA+++    
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRAC 121

Query: 437 GGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKN 496
           G     H                                                +    
Sbjct: 122 GRFFQKHQG----------------------------------------------TCFYF 135

Query: 497 GKTCLHIAATHGHLQMVEVLL---GQGAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
           G+  L +AA      +V  LL    Q A + ATD + + +L H   + + +    +AL +
Sbjct: 136 GELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVL-HALVMIADNSPENSALVI 194

Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
              +G   +   L      + +I   +  TPL LAA+ G++++ + +L    S  A    
Sbjct: 195 HMYDGLLQMGARLCP-TVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHH 253

Query: 614 G 614
            
Sbjct: 254 H 254

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  139 bits (352), Expect = 4e-37
 Identities = 50/264 (18%), Positives = 84/264 (31%), Gaps = 46/264 (17%)

Query: 292 TALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAA---YSGN 348
             L      G  + +  LL ++    K    +           +G T L  A      G 
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSA-----YTEGSTGKTCLMKAVLNLQDGV 58

Query: 349 ENVVRLLLNSA------GVQVDAQTQE---NGYNPLHLACFGGHVTVVGLLLSRAADL-- 397
              +  LL            V+AQ  +    G++ LH+A     +  V LL+   AD+  
Sbjct: 59  NACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118

Query: 398 ----------LQSADKNGKTCLHIAATHGHLQMVEVLL---GQGAEINATDKGGARSIHT 444
                       +    G+  L +AA      +V  LL    Q A + ATD  G   +H 
Sbjct: 119 RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHA 178

Query: 445 AARYGHVGIINTLLQKGEKVDVTTNNLAC--GHVTVVGLLLSRAADLLQSADKNGKTCLH 502
                     N+ L            +    G + +   L        + ++  G T L 
Sbjct: 179 LVMIADNSPENSALV-----------IHMYDGLLQMGARLCPTVQLE-EISNHQGLTPLK 226

Query: 503 IAATHGHLQMVEVLLGQGAEINAT 526
           +AA  G +++   +L +     A 
Sbjct: 227 LAAKEGKIEIFRHILQREFSGAAA 250

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  135 bits (341), Expect = 1e-35
 Identities = 51/253 (20%), Positives = 74/253 (29%), Gaps = 45/253 (17%)

Query: 259 TAVHLAAQNGHNQVLEE-----MRSSKALNVYSK---KLGVTALHVAA---YFGQADTVR 307
             +      G  + L         +SK L   +      G T L  A      G    + 
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIM 63

Query: 308 ELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQT 367
            LL     +    P   A    E     G + LH+A    +   V+LL+   G  V  + 
Sbjct: 64  PLLQIDKDSGNPKPLVNAQCTDE--FYQGHSALHIAIEKRSLQCVKLLV-ENGADVHLRA 120

Query: 368 QEN------------GYNPLHLACFGGHVTVVGLLLSRAADL--LQSADKNGKTCLHIAA 413
                          G  PL LA       VV  LL        L++ D  G T LH   
Sbjct: 121 CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALV 180

Query: 414 TH----------------GHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTL 457
                             G LQM   L         ++  G   +  AA+ G + I   +
Sbjct: 181 MIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHI 240

Query: 458 LQKGEKVDVTTNN 470
           LQ+        ++
Sbjct: 241 LQREFSGA-AAHH 252

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  127 bits (321), Expect = 6e-33
 Identities = 51/282 (18%), Positives = 81/282 (28%), Gaps = 63/282 (22%)

Query: 54  GRSALHLAAEHGYLKVCDALLTH--------KAFINSKSRVGRTALHLAAMN---GYADL 102
            R  L      G  +    LL +             ++   G+T L  A +N   G    
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 103 CRFLVHDHAAVIDILTL----------RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD 152
              L+       +   L          +  + LH+A E   LQ  KLL++ GA +     
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRAC 121

Query: 153 -------------QGQKPIHVAAQNNFPEVAQIFLRAHPSL--VTATTKDGNTCAHIAAM 197
                         G+ P+ +AA     +V    L        + AT   GNT  H   M
Sbjct: 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVM 181

Query: 198 QGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTG 257
                                 +   E + L +    G   +   L          N  G
Sbjct: 182 IA--------------------DNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQG 221

Query: 258 FTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAY 299
            T + LAA+ G  ++   +   +         G  A H   +
Sbjct: 222 LTPLKLAAKEGKIEIFRHILQREF-------SGAAAHHHHHH 256

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  127 bits (320), Expect = 8e-33
 Identities = 44/284 (15%), Positives = 80/284 (28%), Gaps = 62/284 (21%)

Query: 188 GNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEA-----TPLQLAA---EGGHANV 239
                     +G    +  L+++ R       +          T L  A    + G    
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 240 VRVLVKAG-----------ASCTDENKTGFTAVHLAAQNGHNQVLE-------------E 275
           +  L++             A CTDE   G +A+H+A +    Q ++              
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRAC 121

Query: 276 MRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSES 335
            R  +         G   L +AA   Q D V  LL +      +          E     
Sbjct: 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN--PHQPASL--------EATDSL 171

Query: 336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAA 395
           G T LH      + +                      + L +  + G + +   L     
Sbjct: 172 GNTVLHALVMIADNS-------------------PENSALVIHMYDGLLQMGARLCPTVQ 212

Query: 396 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGA 439
              + ++  G T L +AA  G +++   +L +     A      
Sbjct: 213 LE-EISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHHHH 255

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  111 bits (278), Expect = 3e-27
 Identities = 36/256 (14%), Positives = 65/256 (25%), Gaps = 50/256 (19%)

Query: 405 GKTCLHIAATHGHLQMVEVLL--------GQGAEINATDKGGARSIHTAA---RYGHVGI 453
            +  L    + G  + +  LL                    G   +  A    + G    
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 454 INTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 513
           I  LLQ  +        +                         G + LHIA     LQ V
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQ---------------CTDEFYQGHSALHIAIEKRSLQCV 106

Query: 514 EVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV--HDHA 571
           ++L+  GA+++                      G   L LAA     D+  +L+      
Sbjct: 107 KLLVENGADVHLRACGRFFQKHQGTCFYF----GELPLSLAACTKQWDVVTYLLENPHQP 162

Query: 572 AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQ 631
           A ++       T LH                    + A +      + +   +   ++  
Sbjct: 163 ASLEATDSLGNTVLHALV-----------------MIADNSPENSALVIHMYDGLLQMGA 205

Query: 632 IFLRAHPSLVTATTKE 647
             L     L   +  +
Sbjct: 206 -RLCPTVQLEEISNHQ 220

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 89.5 bits (222), Expect = 7e-20
 Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   EQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNH---ARVDVFDQEGRSALH 59
            +  G    K        G  PL +A      ++V  +L N    A ++  D  G + LH
Sbjct: 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLH 177

Query: 60  LAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTL 119
                               + + +    +AL +   +G   +   L      + +I   
Sbjct: 178 ALV-----------------MIADNSPENSALVIHMYDGLLQMGARLCP-TVQLEEISNH 219

Query: 120 RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG 154
           +  TPL LAA+ G++++ + +L    S  A     
Sbjct: 220 QGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHHH 254

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  143 bits (362), Expect = 3e-39
 Identities = 45/220 (20%), Positives = 72/220 (32%), Gaps = 52/220 (23%)

Query: 363 VDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE 422
           + ++T   G     +    GH          AAD+        +T    AA     Q + 
Sbjct: 6   IGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADV----VSEYETPWWTAARKADEQALS 61

Query: 423 VLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLL 482
            LL +  +++A D+ G  ++   A  G    +  L + G                     
Sbjct: 62  QLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG--------------------- 99

Query: 483 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINS 542
               ADL     + G T LH+AA +   ++VE L+  GA+I   D+              
Sbjct: 100 ----ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE-------------- 141

Query: 543 KSRVGRTALHLAAMNGYADLCRFLVH-----DHAAVIDIL 577
               G TAL LA            +          VI++L
Sbjct: 142 ---RGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVL 178

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  141 bits (357), Expect = 1e-38
 Identities = 45/211 (21%), Positives = 68/211 (32%), Gaps = 47/211 (22%)

Query: 401 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQK 460
               G     I    GH           A++ +  +       TAAR      ++ LL +
Sbjct: 10  TAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE---TPWWTAARKADEQALSQLL-E 65

Query: 461 GEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 520
              VD                          + D+NG+T L   A  G  + V +L   G
Sbjct: 66  DRDVD--------------------------AVDENGRTALLFVAGLGSDKCVRLLAEAG 99

Query: 521 AEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR 580
           A+++  D                 R G TALH+AA     ++   LV +  A I++   R
Sbjct: 100 ADLDHRD----------------MRGGLTALHMAAGYVRPEVVEALV-ELGADIEVEDER 142

Query: 581 KQTPLHLAAEAGQLQVCKLLLDLGASIDATD 611
             T L LA E  +       +  G  I    
Sbjct: 143 GLTALELAREILKTTPKGNPMQFGRRIGLEK 173

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  139 bits (353), Expect = 5e-38
 Identities = 43/196 (21%), Positives = 64/196 (32%), Gaps = 28/196 (14%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
           G     +    G + +                                TP   AA   +E
Sbjct: 14  GAMEYLIEWKDGHSPSWVPSSYI----------------AADVVSEYETPWWTAARKADE 57

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
             +  LL      VDA   ENG   L      G    V LL    ADL     + G T L
Sbjct: 58  QALSQLL--EDRDVDAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTAL 114

Query: 410 HIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTN 469
           H+AA +   ++VE L+  GA+I   D+ G  ++  A            +Q G ++     
Sbjct: 115 HMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRI----- 169

Query: 470 NLACGHVTVVGLLLSR 485
               G   V+ +L  +
Sbjct: 170 ----GLEKVINVLEGQ 181

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  138 bits (351), Expect = 1e-37
 Identities = 41/225 (18%), Positives = 64/225 (28%), Gaps = 52/225 (23%)

Query: 211 DRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHN 270
           + + +I +R     A    +  + GH+          A   D      T    AA+    
Sbjct: 1   EVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAA---DVVSEYETPWWTAARKAD- 56

Query: 271 QVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGE 330
                                              + +LL                   +
Sbjct: 57  --------------------------------EQALSQLLE------------DRDV--D 70

Query: 331 LGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLL 390
              E+G T L   A  G++  VRLL   AG  +D +    G   LH+A       VV  L
Sbjct: 71  AVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 129

Query: 391 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 435
           +   AD ++  D+ G T L +A            +  G  I    
Sbjct: 130 VELGAD-IEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEK 173

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  137 bits (348), Expect = 2e-37
 Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 7/168 (4%)

Query: 9   EISKAL-NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYL 67
           E++K + ++    G    LI    GH           A V     E  +    AA     
Sbjct: 1   EVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAARKADE 57

Query: 68  KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR-KQTPLH 126
           +    LL     +++    GRTAL   A  G     R L  +  A +D   +R   T LH
Sbjct: 58  QALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALH 115

Query: 127 LAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 174
           +AA   + +V + L++LGA I+  D++G   + +A +          +
Sbjct: 116 MAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 163

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  125 bits (317), Expect = 3e-33
 Identities = 42/209 (20%), Positives = 68/209 (32%), Gaps = 49/209 (23%)

Query: 427 QGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRA 486
                + T   GA       +                          GH          A
Sbjct: 3   NKIIGSRTAGEGAMEYLIEWK-------------------------DGHSPSWVPSSYIA 37

Query: 487 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRV 546
           AD+        +T    AA     Q +  LL +  +++A D+                  
Sbjct: 38  ADV----VSEYETPWWTAARKADEQALSQLL-EDRDVDAVDEN----------------- 75

Query: 547 GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR-KQTPLHLAAEAGQLQVCKLLLDLGA 605
           GRTAL   A  G     R L  +  A +D   +R   T LH+AA   + +V + L++LGA
Sbjct: 76  GRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGA 134

Query: 606 SIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
            I+  D++G   + +A +          +
Sbjct: 135 DIEVEDERGLTALELAREILKTTPKGNPM 163

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  115 bits (291), Expect = 1e-29
 Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
             TP   A  +   + ++ +L     VD  D+ GR+AL   A  G  K    L    A +
Sbjct: 44  YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL 102

Query: 81  NSK-SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
           + +  R G TALH+AA     ++   LV +  A I++   R  T L LA E  +      
Sbjct: 103 DHRDMRGGLTALHMAAGYVRPEVVEALV-ELGADIEVEDERGLTALELAREILKTTPKGN 161

Query: 140 LLDLGASIDATD 151
            +  G  I    
Sbjct: 162 PMQFGRRIGLEK 173

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  115 bits (290), Expect = 1e-29
 Identities = 38/237 (16%), Positives = 65/237 (27%), Gaps = 58/237 (24%)

Query: 77  KAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQV 136
           K   +  +  G     +   +G++       +  A V+       +TP   AA     Q 
Sbjct: 4   KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS----EYETPWWTAARKADEQA 59

Query: 137 CKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAA 196
              LL+    +DA D+ G+  +   A     +  ++                        
Sbjct: 60  LSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA---------------------- 96

Query: 197 MQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKT 256
                G             +  R+     T L +AA      VV  LV+ GA    E++ 
Sbjct: 97  ---EAGAD-----------LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDER 142

Query: 257 GFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHV 313
           G TA+ LA +                           +      G    +  L   V
Sbjct: 143 GLTALELAREILKTTPKG-----------------NPMQFGRRIGLEKVINVLEGQV 182

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 92.9 bits (232), Expect = 7e-22
 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 6/109 (5%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQE-GRSALHLAAEHGYLKVCDAL 73
           +     G T LL     G  + V  +    A +D  D   G +ALH+AA +   +V +AL
Sbjct: 70  DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 129

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH-----DHAAVIDIL 117
           +   A I  +   G TAL LA            +          VI++L
Sbjct: 130 VELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVL 178

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  139 bits (354), Expect = 6e-39
 Identities = 65/127 (51%), Positives = 89/127 (70%), Gaps = 3/127 (2%)

Query: 335 SGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRA 394
           +G TPLHLAA +G+  VV+LLL  AG  V+A+  +NG  PLHLA   GH+ VV LLL   
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAG 58

Query: 395 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGII 454
           AD + + DKNG+T LH+AA +GHL++V++LL  GA++NA DK G   +H AAR GH+ ++
Sbjct: 59  AD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 117

Query: 455 NTLLQKG 461
             LL+ G
Sbjct: 118 KLLLEAG 124

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  129 bits (328), Expect = 2e-35
 Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 27/152 (17%)

Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 429
           NG  PLHLA   GH+ VV LLL   AD+  + DKNG+T LH+AA +GHL++V++LL  GA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59

Query: 430 EINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADL 489
           ++NA DK G   +H AAR GH+                          VV LLL   AD 
Sbjct: 60  DVNAKDKNGRTPLHLAARNGHLE-------------------------VVKLLLEAGAD- 93

Query: 490 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
           + + DKNG+T LH+AA +GHL++V++LL  GA
Sbjct: 94  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  129 bits (326), Expect = 4e-35
 Identities = 62/164 (37%), Positives = 91/164 (55%), Gaps = 43/164 (26%)

Query: 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
           NG+T LH+AA +GHL++V++LL  GA++NA DK G   +H AAR GH+ ++  LL+ G  
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 464 VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEI 523
           V+                            DKNG+T LH+AA +GHL++V++LL  GA++
Sbjct: 61  VNA--------------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGADV 94

Query: 524 NATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 567
           NA DK                  GRT LHLAA NG+ ++ + L+
Sbjct: 95  NAKDK-----------------NGRTPLHLAARNGHLEVVKLLL 121

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  126 bits (320), Expect = 2e-34
 Identities = 63/140 (45%), Positives = 84/140 (60%), Gaps = 16/140 (11%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
           G T LH+AA  G  + V+ LL             GA        ++G TPLHLAA +G+ 
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEA-----------GADV--NAKDKNGRTPLHLAARNGHL 48

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
            VV+LLL  AG  V+A+  +NG  PLHLA   GH+ VV LLL   AD + + DKNG+T L
Sbjct: 49  EVVKLLL-EAGADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPL 105

Query: 410 HIAATHGHLQMVEVLLGQGA 429
           H+AA +GHL++V++LL  GA
Sbjct: 106 HLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  122 bits (309), Expect = 8e-33
 Identities = 59/144 (40%), Positives = 88/144 (61%), Gaps = 20/144 (13%)

Query: 496 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAA 555
           NG+T LH+AA +GHL++V++LL  GA++NA DK                  GRT LHLAA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-----------------GRTPLHLAA 43

Query: 556 MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQ 615
            NG+ ++ + L+ +  A ++      +TPLHLAA  G L+V KLLL+ GA ++A D  G+
Sbjct: 44  RNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGR 102

Query: 616 KPIHVAAQNNFPEVAQIFLR--AH 637
            P+H+AA+N   EV ++ L   A+
Sbjct: 103 TPLHLAARNGHLEVVKLLLEAGAY 126

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  117 bits (296), Expect = 4e-31
 Identities = 56/125 (44%), Positives = 80/125 (64%), Gaps = 1/125 (0%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           G TPL +A   GH+E+V  +L   A V+  D+ GR+ LHLAA +G+L+V   LL   A +
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           N+K + GRT LHLAA NG+ ++ + L+ +  A ++      +TPLHLAA  G L+V KLL
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120

Query: 141 LDLGA 145
           L+ GA
Sbjct: 121 LEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  101 bits (254), Expect = 2e-25
 Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 16/136 (11%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
           TPL LAA  GH  VV++L++AGA    ++K G T +HLAA+NGH +V++ +  + A +V 
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-DVN 62

Query: 286 SK-KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAA 344
           +K K G T LH+AA  G  + V+ LL             GA        ++G TPLHLAA
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEA-----------GADV--NAKDKNGRTPLHLAA 109

Query: 345 YSGNENVVRLLLNSAG 360
            +G+  VV+LLL  AG
Sbjct: 110 RNGHLEVVKLLL-EAG 124

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 99.3 bits (249), Expect = 1e-24
 Identities = 56/153 (36%), Positives = 80/153 (52%), Gaps = 37/153 (24%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
           +TPLHLAA  G L+V KLLL+ GA ++A D  G+ P+H+AA+N   EV ++ L    + V
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADV 61

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
            A  K+G                                     TPL LAA  GH  VV+
Sbjct: 62  NAKDKNGR------------------------------------TPLHLAARNGHLEVVK 85

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
           +L++AGA    ++K G T +HLAA+NGH +V++
Sbjct: 86  LLLEAGADVNAKDKNGRTPLHLAARNGHLEVVK 118

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 90.5 bits (226), Expect = 1e-21
 Identities = 40/93 (43%), Positives = 59/93 (63%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N +   G TPL +A   GH+E+V  +L   A V+  D+ GR+ LHLAA +G+L+V   LL
Sbjct: 29  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLV 107
              A +N+K + GRT LHLAA NG+ ++ + L+
Sbjct: 89  EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 86.2 bits (215), Expect = 4e-20
 Identities = 49/128 (38%), Positives = 80/128 (62%), Gaps = 7/128 (5%)

Query: 187 DGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLVK 245
           +G T  H+AA  G + V++ L++   +G  ++A+++    TPL LAA  GH  VV++L++
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLE---AGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLE 56

Query: 246 AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQAD 304
           AGA    ++K G T +HLAA+NGH +V++ +  + A +V +K K G T LH+AA  G  +
Sbjct: 57  AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLE 115

Query: 305 TVRELLSH 312
            V+ LL  
Sbjct: 116 VVKLLLEA 123

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 60.4 bits (148), Expect = 3e-11
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N +   G TPL +A   GH+E+V  +L   A V+  D+ GR+ LHLAA +G+L+V   LL
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121

Query: 75  THKAF 79
              A+
Sbjct: 122 EAGAY 126

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  147 bits (371), Expect = 6e-39
 Identities = 47/336 (13%), Positives = 94/336 (27%), Gaps = 33/336 (9%)

Query: 292 TALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENV 351
                       D   + LS     +K+ P    +             L    +   + +
Sbjct: 21  DRTAGPIITFTHDLTSDFLSSPLKIMKALPSPVVN--DNEQKMKLEAFLQRLLFPEIQEM 78

Query: 352 VRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHI 411
              L N+     +++   +     H++       V     +   +L    D++G T LH 
Sbjct: 79  PTSL-NNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHW 137

Query: 412 AATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNL 471
             +  +L++V+ L+  G+     D  G   +  A +  +                     
Sbjct: 138 LTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN--------------------- 176

Query: 472 ACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCD 531
                     LL      L   D   +T LH       +          A     D +  
Sbjct: 177 -NYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSA-----AAKYYLDILMG 230

Query: 532 ALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV---HDHAAVIDILTLRKQTPLHLA 588
            ++  +          + +          D     +      A +++       T L++A
Sbjct: 231 WIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIA 290

Query: 589 AEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQN 624
           A  G + +   LLD GA     +  G +P+   A  
Sbjct: 291 ARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGL 326

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  114 bits (286), Expect = 9e-28
 Identities = 43/272 (15%), Positives = 87/272 (31%), Gaps = 21/272 (7%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLK-VCDAL 73
           N+Q       L         E+  ++ N+ +  +             +    L+ V DA 
Sbjct: 57  NEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAF 116

Query: 74  LTHKAFINSKS-RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG 132
              +  +N      G T LH        +L + LV  H +         ++ L  A ++ 
Sbjct: 117 PNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLV-KHGSNRLYGDNMGESCLVKAVKSV 175

Query: 133 ----QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN-----------FPEVAQIFLRAH 177
                     LL  L   +   D   +  +H     +           + ++   ++   
Sbjct: 176 NNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKK 235

Query: 178 PSLVTATTKDGNTCAHIAAMQGSVGVIEELM--KFDRSGVISARNRVTEATPLQLAAEGG 235
            +    +  +                I E +  K+  + +++A++     T L +AA  G
Sbjct: 236 QNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDS-NGDTCLNIAARLG 294

Query: 236 HANVVRVLVKAGASCTDENKTGFTAVHLAAQN 267
           + ++V  L+  GA     NK+G   V   A  
Sbjct: 295 NISIVDALLDYGADPFIANKSGLRPVDFGAGL 326

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  106 bits (266), Expect = 3e-25
 Identities = 50/319 (15%), Positives = 95/319 (29%), Gaps = 63/319 (19%)

Query: 144 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGV 203
             + +    + +  +         E+    L    S   +     N      +    +  
Sbjct: 53  VVNDNEQKMKLEAFLQRLLFPEIQEMPT-SLNNDSSNRNSEGGSSNQQQQHVSFDSLLQE 111

Query: 204 IEEL---------MKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDEN 254
           + +          +  D  G           TPL       +  +V+ LVK G++    +
Sbjct: 112 VNDAFPNTQLNLNIPVDEHG----------NTPLHWLTSIANLELVKHLVKHGSNRLYGD 161

Query: 255 KTGFTAVHLAAQNGHN---QVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELL 310
             G + +  A ++ +N      E +       +  +  +  T LH               
Sbjct: 162 NMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHII------------ 209

Query: 311 SHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQEN 370
                                   SGMT    AA    + ++  ++      + + T  N
Sbjct: 210 ----------------------ITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT--N 245

Query: 371 GYNPLHLACFGGHVTVVGLLLSRAADLLQ---SADKNGKTCLHIAATHGHLQMVEVLLGQ 427
                     G     +   L     +     + D NG TCL+IAA  G++ +V+ LL  
Sbjct: 246 EKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDY 305

Query: 428 GAEINATDKGGARSIHTAA 446
           GA+    +K G R +   A
Sbjct: 306 GADPFIANKSGLRPVDFGA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 64.7 bits (157), Expect = 4e-11
 Identities = 14/89 (15%), Positives = 31/89 (34%)

Query: 7   GTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGY 66
                ++   +                +E ++        ++  D  G + L++AA  G 
Sbjct: 236 QNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGN 295

Query: 67  LKVCDALLTHKAFINSKSRVGRTALHLAA 95
           + + DALL + A     ++ G   +   A
Sbjct: 296 ISIVDALLDYGADPFIANKSGLRPVDFGA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 63.5 bits (154), Expect = 8e-11
 Identities = 15/108 (13%), Positives = 37/108 (34%), Gaps = 1/108 (0%)

Query: 519 QGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM-NGYADLCRFLVHDHAAVIDIL 577
           Q        ++  +L    +  NS+           +  +   ++     +    +   +
Sbjct: 68  QRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPV 127

Query: 578 TLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN 625
                TPLH       L++ K L+  G++    D+ G+  +  A ++ 
Sbjct: 128 DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSV 175

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 59.7 bits (144), Expect = 1e-09
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 6   SGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAE 63
               I+  LN Q S G T L IA   G++ +V+ +L+  A   + ++ G   +   A 
Sbjct: 268 LKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  135 bits (341), Expect = 2e-36
 Identities = 30/203 (14%), Positives = 55/203 (27%), Gaps = 27/203 (13%)

Query: 333 SESGMTPLHLAAYSGNENVVRLLLNS-AGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL 391
           + S    +  AA  G       L       +         Y+ L          +   L+
Sbjct: 3   AMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLI 62

Query: 392 SRAADLLQSADKNGKTCLHIAATHGH------LQMVEVLLGQGAEINATDKGGARSIHTA 445
           ++ AD+ +S  K G T        G        ++ ++ L +GA+I A  K     +   
Sbjct: 63  NKGADI-KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKN 121

Query: 446 ARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAA 505
                V     +                       +       LL   DK G T L    
Sbjct: 122 IFNYFVDENEMIP------------------LYKLIFSQSGLQLL-IKDKWGLTALEFVK 162

Query: 506 THGHLQMVEVLLGQGAEINATDK 528
                  ++++     + N  + 
Sbjct: 163 RCQKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  124 bits (314), Expect = 7e-33
 Identities = 30/219 (13%), Positives = 61/219 (27%), Gaps = 40/219 (18%)

Query: 400 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ 459
           S   +    +  AA  G  +    L  +G E        +  ++   R  +         
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKE-SVLKSNILYDVLRNNNDE------- 52

Query: 460 KGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ 519
                             +   L+++ AD+ +S  K G T        G           
Sbjct: 53  --------------ARYKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGN--------- 88

Query: 520 GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD------LCRFLVHDHAAV 573
             +I  T ++C   L   A I +  +  +  +     N + D      L + +       
Sbjct: 89  --DITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ 146

Query: 574 IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD 612
           + I      T L       +    K++ D     +  ++
Sbjct: 147 LLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  123 bits (311), Expect = 2e-32
 Identities = 26/213 (12%), Positives = 60/213 (28%), Gaps = 41/213 (19%)

Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH-----GHLQMVEVL 424
           + Y  +  A   G       L  +  +     +   K+ +              ++   L
Sbjct: 5   SEYRTVSAAAMLGTYEDFLELFEKGYE---DKESVLKSNILYDVLRNNNDEARYKISMFL 61

Query: 425 LGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLS 484
           + +GA+I +  K G        + G   I  T                     +  + L 
Sbjct: 62  INKGADIKSRTKEGTTLFFPLFQGGGNDITGT-------------------TELCKIFLE 102

Query: 485 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHK-AFINSK 543
           + AD + +  K  K  +     +  +   E++            +   + +     +  K
Sbjct: 103 KGAD-ITALYKPYKIVVFKNIFNYFVDENEMI-----------PLYKLIFSQSGLQLLIK 150

Query: 544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDI 576
            + G TAL            + +  D+    ++
Sbjct: 151 DKWGLTALEFVKRCQKPIALKMME-DYIKKYNL 182

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  123 bits (310), Expect = 3e-32
 Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 26/192 (13%)

Query: 292 TALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENV 351
             +  AA  G  +   EL     G    +          L S      L          +
Sbjct: 8   RTVSAAAMLGTYEDFLELFEK--GYEDKES--------VLKSNILYDVLRNNNDEARYKI 57

Query: 352 VRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVG------LLLSRAADLLQSADKNG 405
              L+ + G  + ++T + G         GG   + G      + L + AD+  +  K  
Sbjct: 58  SMFLI-NKGADIKSRT-KEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYKPY 114

Query: 406 KTCLHIAATHGHL------QMVEVLLGQ-GAEINATDKGGARSIHTAARYGHVGIINTLL 458
           K  +     +  +       + +++  Q G ++   DK G  ++    R      +  + 
Sbjct: 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMME 174

Query: 459 QKGEKVDVTTNN 470
              +K ++  N+
Sbjct: 175 DYIKKYNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  119 bits (299), Expect = 9e-31
 Identities = 26/198 (13%), Positives = 51/198 (25%), Gaps = 32/198 (16%)

Query: 255 KTGFTAVHLAAQNGHNQVLEEMRSSKA-LNVYSKK--LGVTALHVAAYFGQADTVRELLS 311
            + +  V  AA  G  +   E+            K  +    L       +      L++
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLIN 63

Query: 312 HVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENV------VRLLLNSAGVQVDA 365
                       GA    +  ++ G T        G  ++       ++ L   G  + A
Sbjct: 64  K-----------GADI--KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFL-EKGADITA 109

Query: 366 QTQENGYNPLHLACFGGHVTVVG-------LLLSRAADLLQSADKNGKTCLHIAATHGHL 418
              +     +    F   V           +       LL   DK G T L         
Sbjct: 110 LY-KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL-IKDKWGLTALEFVKRCQKP 167

Query: 419 QMVEVLLGQGAEINATDK 436
             ++++     + N  + 
Sbjct: 168 IALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  112 bits (281), Expect = 2e-28
 Identities = 24/182 (13%), Positives = 50/182 (27%), Gaps = 22/182 (12%)

Query: 11  SKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQE---GRSALHLAAEHGYL 67
           S A+++     +  +  A   G  E    +            +       L    +    
Sbjct: 1   SNAMSE-----YRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARY 55

Query: 68  KVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD------LCRFLVHDHAAVIDILTLRK 121
           K+   L+   A I S+++ G T        G  D      LC+  + +  A I  L    
Sbjct: 56  KISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFL-EKGADITALYKPY 114

Query: 122 QTPLHLAAEAGQLQVCK-------LLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 174
           +  +        +   +       +    G  +   D  G   +    +   P   ++  
Sbjct: 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMME 174

Query: 175 RA 176
             
Sbjct: 175 DY 176

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  108 bits (271), Expect = 4e-27
 Identities = 20/153 (13%), Positives = 48/153 (31%), Gaps = 12/153 (7%)

Query: 12  KALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKV-- 69
           K    +++I +  L    +    ++   ++N  A +    +EG +      + G   +  
Sbjct: 33  KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITG 92

Query: 70  ----CDALLTHKAFINSKSRVGRTALHLAAMNGYAD------LCRFLVHDHAAVIDILTL 119
               C   L   A I +  +  +  +     N + D      L + +       + I   
Sbjct: 93  TTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDK 152

Query: 120 RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD 152
              T L       +    K++ D     +  ++
Sbjct: 153 WGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 98.2 bits (245), Expect = 1e-23
 Identities = 24/179 (13%), Positives = 53/179 (29%), Gaps = 13/179 (7%)

Query: 82  SKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK--QTPLHLAAEAGQLQVCKL 139
           S +      +  AAM G  +    L        + +         L    +  + ++   
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMF 60

Query: 140 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL-----VTATTKDGNTCAHI 194
           L++ GA I +   +G        Q    ++          L     +TA  K        
Sbjct: 61  LINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFK 120

Query: 195 AAMQGSVGVIEEL----MKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLVKAGA 248
                 V   E +    + F +SG+ +  +++    T L+          ++++     
Sbjct: 121 NIFNYFVDENEMIPLYKLIFSQSGLQLLIKDK-WGLTALEFVKRCQKPIALKMMEDYIK 178

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 94.7 bits (236), Expect = 2e-22
 Identities = 29/197 (14%), Positives = 53/197 (26%), Gaps = 30/197 (15%)

Query: 492 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTAL 551
           S   +    +  AA  G  +    L  +G E                    KS +    L
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKE--------------SVLKSNILYDVL 46

Query: 552 HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQV------CKLLLDLGA 605
                     +  FL+ +  A I   T    T      + G   +      CK+ L+ GA
Sbjct: 47  RNNNDEARYKISMFLI-NKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGA 105

Query: 606 SIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL------VTATTKEKERAKDLIAAGK 659
            I A     +  +     N F +  ++              +    K    A + +   +
Sbjct: 106 DITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQ 165

Query: 660 HCEGMATELLALAAGAD 676
                A +++       
Sbjct: 166 KPI--ALKMM-EDYIKK 179

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  131 bits (331), Expect = 1e-35
 Identities = 39/129 (30%), Positives = 48/129 (37%), Gaps = 5/129 (3%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
            S    L  AA  G    VR LL  AG   +A     G  P+ +   G    V  LLL  
Sbjct: 10  GSSDAGLATAAARGQVETVRQLL-EAGADPNALN-RFGRRPIQVMMMG-SAQVAELLLLH 66

Query: 394 AADLLQSADKNGKTC-LHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452
            A+    AD    T  +H AA  G L  + VL   GA ++  D  G   +  A   GH  
Sbjct: 67  GAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRD 125

Query: 453 IINTLLQKG 461
           I   L    
Sbjct: 126 IARYLHAAT 134

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  128 bits (324), Expect = 1e-34
 Identities = 36/164 (21%), Positives = 56/164 (34%), Gaps = 30/164 (18%)

Query: 359 AGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL 418
               +      +    L  A   G V  V  LL   AD   + ++ G+  + +    G  
Sbjct: 1   GSPGIHMLG-GSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMM-MGSA 57

Query: 419 QMVEVLLGQGAEINATDK-GGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVT 477
           Q+ E+LL  GAE N  D     R +H AAR G +  +  L + G ++DV           
Sbjct: 58  QVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV----------- 106

Query: 478 VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
                           D  G+  + +A   GH  +   L     
Sbjct: 107 ---------------CDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  126 bits (319), Expect = 5e-34
 Identities = 41/168 (24%), Positives = 56/168 (33%), Gaps = 45/168 (26%)

Query: 401 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQK 460
              +    L  AA  G ++ V  LL  GA+ NA ++ G R I                  
Sbjct: 8   LGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM------------- 54

Query: 461 GEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTC-LHIAATHGHLQMVEVLLGQ 519
                        G   V  LLL   A+    AD    T  +H AA  G L  + VL   
Sbjct: 55  -------------GSAQVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

Query: 520 GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 567
           GA ++  D                   GR  + LA   G+ D+ R+L 
Sbjct: 101 GARLDVCDA-----------------WGRLPVDLAEEQGHRDIARYLH 131

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  121 bits (307), Expect = 2e-32
 Identities = 33/140 (23%), Positives = 49/140 (35%), Gaps = 16/140 (11%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
               L  AA  GQ +TVR+LL             GA       +  G  P+ +    G+ 
Sbjct: 12  SDAGLATAAARGQVETVRQLLEA-----------GADP--NALNRFGRRPIQVMMM-GSA 57

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
            V  LLL   G + +         P+H A   G +  + +L    A L    D  G+  +
Sbjct: 58  QVAELLL-LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVCDAWGRLPV 115

Query: 410 HIAATHGHLQMVEVLLGQGA 429
            +A   GH  +   L     
Sbjct: 116 DLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  117 bits (296), Expect = 5e-31
 Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 20/145 (13%)

Query: 493 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALH 552
              +    L  AA  G ++ V  LL  GA+ NA ++                  GR  + 
Sbjct: 8   LGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRF-----------------GRRPIQ 50

Query: 553 LAAMNGYADLCRFLVHDHAAVIDILTLRKQT-PLHLAAEAGQLQVCKLLLDLGASIDATD 611
           +    G A +   L+  H A  +       T P+H AA  G L    +L   GA +D  D
Sbjct: 51  VMM-MGSAQVAELLL-LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCD 108

Query: 612 DQGQKPIHVAAQNNFPEVAQIFLRA 636
             G+ P+ +A +    ++A+    A
Sbjct: 109 AWGRLPVDLAEEQGHRDIARYLHAA 133

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  116 bits (294), Expect = 1e-30
 Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 3/132 (2%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           +         L  A  RG +E V  +L   A  +  ++ GR  + +    G  +V + LL
Sbjct: 6   HMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQVAELLL 64

Query: 75  THKAFINSKSRVGRT-ALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
            H A  N       T  +H AA  G+ D    L     A +D+     + P+ LA E G 
Sbjct: 65  LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLH-RAGARLDVCDAWGRLPVDLAEEQGH 123

Query: 134 LQVCKLLLDLGA 145
             + + L     
Sbjct: 124 RDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  114 bits (288), Expect = 6e-30
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 45  ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCR 104
             + +      + L  AA  G ++    LL   A  N+ +R GR  + +    G A +  
Sbjct: 3   PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQVAE 61

Query: 105 FLVHDHAAVIDILTLRKQT-PLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQ 163
            L+  H A  +       T P+H AA  G L    +L   GA +D  D  G+ P+ +A +
Sbjct: 62  LLL-LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE 120

Query: 164 NNFPEVAQIFLRA 176
               ++A+    A
Sbjct: 121 QGHRDIARYLHAA 133

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  102 bits (258), Expect = 8e-26
 Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 19/153 (12%)

Query: 246 AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQAD 304
                     +    +  AA  G  + + ++  + A +  +  + G   + V    G A 
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGA-DPNALNRFGRRPIQVMMM-GSAQ 58

Query: 305 TVRELLSHVPGTVKSDPPTGASFLGELGSESGMT-PLHLAAYSGNENVVRLLLNSAGVQV 363
               LL H           GA         + +T P+H AA  G  + + +L   AG ++
Sbjct: 59  VAELLLLH-----------GAEP--NCADPATLTRPVHDAAREGFLDTLVVLH-RAGARL 104

Query: 364 DAQTQENGYNPLHLACFGGHVTVVGLLLSRAAD 396
           D      G  P+ LA   GH  +   L +   D
Sbjct: 105 DVCD-AWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  101 bits (255), Expect = 2e-25
 Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 37/168 (22%)

Query: 114 IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 173
           I +L       L  AA  GQ++  + LL+ GA  +A +  G++PI V    +  +VA+  
Sbjct: 5   IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSA-QVAE-L 62

Query: 174 LRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAE 233
           L  H +          T                                    P+  AA 
Sbjct: 63  LLLHGAEPNCADPATLT-----------------------------------RPVHDAAR 87

Query: 234 GGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281
            G  + + VL +AGA     +  G   V LA + GH  +   + ++  
Sbjct: 88  EGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 62.1 bits (152), Expect = 1e-11
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 574 IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 633
           I +L       L  AA  GQ++  + LL+ GA  +A +  G++PI V    +  +VA++ 
Sbjct: 5   IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSA-QVAELL 63

Query: 634 L 634
           L
Sbjct: 64  L 64

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  129 bits (328), Expect = 3e-35
 Identities = 39/173 (22%), Positives = 61/173 (35%), Gaps = 44/173 (25%)

Query: 401 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQK 460
            +  G+T LHIA+  G +  VE LL  G++ N  D  G   +H A  +GH+ ++  LLQ 
Sbjct: 6   TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQH 65

Query: 461 GEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 520
              V+ T                               + LH AA +GH+ +V++LL  G
Sbjct: 66  KALVNTT--------------------------GYQNDSPLHDAAKNGHVDIVKLLLSYG 99

Query: 521 AEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV 573
           A  NA +                   G   +          L       + + 
Sbjct: 100 ASRNAVNI-----------------FGLRPVDYTDDESMKSLLLLPEK-NESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  129 bits (328), Expect = 3e-35
 Identities = 42/164 (25%), Positives = 62/164 (37%), Gaps = 28/164 (17%)

Query: 363 VDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE 422
           +D  T   G   LH+A   G +  V  LL   +D     D  G T LH A  HGHL++VE
Sbjct: 2   IDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVE 60

Query: 423 VLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLL 482
           +LL   A +N T       +H AA+                          GHV +V LL
Sbjct: 61  LLLQHKALVNTTGYQNDSPLHDAAKN-------------------------GHVDIVKLL 95

Query: 483 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT 526
           LS  A    + +  G   +          ++ +     +  +A+
Sbjct: 96  LSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES-SSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  128 bits (324), Expect = 9e-35
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 18/143 (12%)

Query: 493 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALH 552
            +  G+T LHIA+  G +  VE LL  G++ N  D                   G T LH
Sbjct: 6   TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHA-----------------GWTPLH 48

Query: 553 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD 612
            A  +G+  +   L+  H A+++    +  +PLH AA+ G + + KLLL  GAS +A + 
Sbjct: 49  EACNHGHLKVVELLL-QHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNI 107

Query: 613 QGQKPIHVAAQNNFPEVAQIFLR 635
            G +P+      +   +  +  +
Sbjct: 108 FGLRPVDYTDDESMKSLLLLPEK 130

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  120 bits (304), Expect = 6e-32
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 1/125 (0%)

Query: 51  DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH 110
           +  G + LH+A+  G +   + LL + +  N K   G T LH A  +G+  +   L+  H
Sbjct: 7   NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLL-QH 65

Query: 111 AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA 170
            A+++    +  +PLH AA+ G + + KLLL  GAS +A +  G +P+      +   + 
Sbjct: 66  KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLL 125

Query: 171 QIFLR 175
            +  +
Sbjct: 126 LLPEK 130

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  119 bits (302), Expect = 9e-32
 Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 17/152 (11%)

Query: 283 NVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHL 342
           + ++   G T LH+A+  G   +V  LL +           G+     +   +G TPLH 
Sbjct: 3   DPFTNHRGETLLHIASIKGDIPSVEYLLQN-----------GSDP--NVKDHAGWTPLHE 49

Query: 343 AAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSAD 402
           A   G+  VV LLL      V+        +PLH A   GHV +V LLLS  A    + +
Sbjct: 50  ACNHGHLKVVELLL-QHKALVNTTG-YQNDSPLHDAAKNGHVDIVKLLLSYGAS-RNAVN 106

Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQGAEINAT 434
             G   +          ++ +     +  +A+
Sbjct: 107 IFGLRPVDYTDDESMKSLLLLPEKNES-SSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  117 bits (296), Expect = 6e-31
 Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 2/130 (1%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           G T L IA  +G +  V  +L N +  +V D  G + LH A  HG+LKV + LL HKA +
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           N+      + LH AA NG+ D+ + L+  + A  + + +    P+    +     +  L 
Sbjct: 70  NTTGYQNDSPLHDAAKNGHVDIVKLLL-SYGASRNAVNIFGLRPVDYTDDESMKSLLLLP 128

Query: 141 LDLGASIDAT 150
                S  A+
Sbjct: 129 EK-NESSSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  112 bits (282), Expect = 5e-29
 Identities = 41/183 (22%), Positives = 65/183 (35%), Gaps = 46/183 (25%)

Query: 428 GAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAA 487
           G +   T+  G   +H A+  G +  +  LLQ G   +V                     
Sbjct: 1   GIDPF-TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV--------------------- 38

Query: 488 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVG 547
                 D  G T LH A  HGHL++VE+LL   A +N T                     
Sbjct: 39  -----KDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQ-----------------N 76

Query: 548 RTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI 607
            + LH AA NG+ D+ + L+  + A  + + +    P+    +     +  L      S 
Sbjct: 77  DSPLHDAAKNGHVDIVKLLL-SYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK-NESS 134

Query: 608 DAT 610
            A+
Sbjct: 135 SAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  104 bits (261), Expect = 3e-26
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 37/162 (22%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
           +T LH+A+  G +   + LL  G+  +  D  G  P+H A  +   +V ++ L  H +LV
Sbjct: 11  ETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLL-QHKALV 69

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
             T    ++                                    PL  AA+ GH ++V+
Sbjct: 70  NTTGYQNDS------------------------------------PLHDAAKNGHVDIVK 93

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALN 283
           +L+  GAS    N  G   V          +L     +++ +
Sbjct: 94  LLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSS 135

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 94.4 bits (236), Expect = 7e-23
 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N +   GWTPL  ACN GH+++V  +L + A V+    +  S LH AA++G++ +   LL
Sbjct: 37  NVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLL 96

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV 113
           ++ A  N+ +  G   +          L       + + 
Sbjct: 97  SYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK-NESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 57.0 bits (139), Expect = 9e-10
 Identities = 11/68 (16%), Positives = 25/68 (36%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N       +PL  A   GH+++V  +L+  A  +  +  G   +    +     +     
Sbjct: 70  NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPE 129

Query: 75  THKAFINS 82
            +++   S
Sbjct: 130 KNESSSAS 137

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  127 bits (321), Expect = 3e-34
 Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 44/178 (24%)

Query: 393 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452
           R +        +    L  AA  G    V +L+  GA++NA D+ G   ++ A  +GH+ 
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLE 61

Query: 453 IINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 512
           I+  LL+ G  V+                            D  G T LH+AA  GHL++
Sbjct: 62  IVEVLLKNGADVNA--------------------------VDAIGFTPLHLAAFIGHLEI 95

Query: 513 VEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV-HD 569
            EVLL  GA++NA DK                  G+TA  ++  NG  DL   L   +
Sbjct: 96  AEVLLKHGADVNAQDK-----------------FGKTAFDISIGNGNEDLAEILQKLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  122 bits (310), Expect = 6e-33
 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 18/150 (12%)

Query: 485 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKS 544
           R +        +    L  AA  G    V +L+  GA++NA D+                
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEY--------------- 46

Query: 545 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 604
             G T L+LA  +G+ ++   L+  + A ++ +     TPLHLAA  G L++ ++LL  G
Sbjct: 47  --GLTPLYLATAHGHLEIVEVLL-KNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG 103

Query: 605 ASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           A ++A D  G+    ++  N   ++A+I  
Sbjct: 104 ADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  119 bits (300), Expect = 1e-31
 Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 3/123 (2%)

Query: 336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAA 395
               L  AA +G ++ VR+L+ + G  V+A+  E G  PL+LA   GH+ +V +LL   A
Sbjct: 14  LGKKLLEAARAGQDDEVRILM-ANGADVNAKD-EYGLTPLYLATAHGHLEIVEVLLKNGA 71

Query: 396 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIIN 455
           D + + D  G T LH+AA  GHL++ EVLL  GA++NA DK G  +   +   G+  +  
Sbjct: 72  D-VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAE 130

Query: 456 TLL 458
            L 
Sbjct: 131 ILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  109 bits (274), Expect = 6e-28
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 1/121 (0%)

Query: 54  GRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAV 113
               L  AA  G       L+ + A +N+K   G T L+LA  +G+ ++   L+  + A 
Sbjct: 14  LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLL-KNGAD 72

Query: 114 IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF 173
           ++ +     TPLHLAA  G L++ ++LL  GA ++A D  G+    ++  N   ++A+I 
Sbjct: 73  VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

Query: 174 L 174
            
Sbjct: 133 Q 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  107 bits (270), Expect = 2e-27
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 5   MSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEH 64
           M G+      +   S     LL A   G  + V  ++ N A V+  D+ G + L+LA  H
Sbjct: 1   MRGSHH---HHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAH 57

Query: 65  GYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTP 124
           G+L++ + LL + A +N+   +G T LHLAA  G+ ++   L+  H A ++      +T 
Sbjct: 58  GHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLL-KHGADVNAQDKFGKTA 116

Query: 125 LHLAAEAGQLQVCKLLL 141
             ++   G   + ++L 
Sbjct: 117 FDISIGNGNEDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 92.1 bits (230), Expect = 5e-22
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 2/125 (1%)

Query: 87  GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146
               L  AA  G  D  R L+  + A ++       TPL+LA   G L++ ++LL  GA 
Sbjct: 14  LGKKLLEAARAGQDDEVRILM-ANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72

Query: 147 IDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEE 206
           ++A D  G  P+H+AA     E+A+  L  H + V A  K G T   I+   G+  + E 
Sbjct: 73  VNAVDAIGFTPLHLAAFIGHLEIAE-VLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEI 131

Query: 207 LMKFD 211
           L K +
Sbjct: 132 LQKLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 87.1 bits (217), Expect = 2e-20
 Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 17/137 (12%)

Query: 257 GFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSHVPG 315
               +  AA+ G +  +  + ++ A +V +K + G+T L++A   G  + V  LL +   
Sbjct: 14  LGKKLLEAARAGQDDEVRILMANGA-DVNAKDEYGLTPLYLATAHGHLEIVEVLLKN--- 69

Query: 316 TVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPL 375
                   GA          G TPLHLAA+ G+  +  +LL   G  V+AQ  + G    
Sbjct: 70  --------GADV--NAVDAIGFTPLHLAAFIGHLEIAEVLL-KHGADVNAQD-KFGKTAF 117

Query: 376 HLACFGGHVTVVGLLLS 392
            ++   G+  +  +L  
Sbjct: 118 DISIGNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 85.9 bits (214), Expect = 6e-20
 Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 7/128 (5%)

Query: 187 DGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLVK 245
           D       AA  G    +  LM    +G  ++A++     TPL LA   GH  +V VL+K
Sbjct: 13  DLGKKLLEAARAGQDDEVRILMA---NGADVNAKDE-YGLTPLYLATAHGHLEIVEVLLK 68

Query: 246 AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQAD 304
            GA     +  GFT +HLAA  GH ++ E +    A +V ++ K G TA  ++   G  D
Sbjct: 69  NGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGA-DVNAQDKFGKTAFDISIGNGNED 127

Query: 305 TVRELLSH 312
               L   
Sbjct: 128 LAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 55.5 bits (135), Expect = 3e-09
 Identities = 18/62 (29%), Positives = 34/62 (54%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N   +IG+TPL +A   GH+E+   +L + A V+  D+ G++A  ++  +G   + + L 
Sbjct: 74  NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133

Query: 75  TH 76
             
Sbjct: 134 KL 135

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  126 bits (318), Expect = 1e-32
 Identities = 51/281 (18%), Positives = 89/281 (31%), Gaps = 77/281 (27%)

Query: 338 TPLHLAAYSGN----ENVVRLLLNSAGVQV---DAQTQENGYNPLHLACF---GGHVTVV 387
             L      G+    E ++  LL +   ++   + +    G   L  A      G    +
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLL-THKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTI 65

Query: 388 GLLLSRAADLLQ----------SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
            +LL  A                    G+T LHIA        VE+L+ +GA+++A  +G
Sbjct: 66  PILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARG 125

Query: 438 GARSI--------------HTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLL 483
                                AA      I++ L + G K                    
Sbjct: 126 RFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK-------------------- 165

Query: 484 SRAADLLQSADKNGKTCLHIAATHGH---------LQMVEVLLGQGAEINATDKVCDALL 534
              AD L+  D  G T LH                 +M ++LL + A++     +     
Sbjct: 166 --QAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNL----- 217

Query: 535 THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVID 575
             +A +N+    G + L +AA  G   + + ++    A   
Sbjct: 218 --EALLNND---GLSPLMMAAKTGKIGIFQHIIRREIADAA 253

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  109 bits (274), Expect = 1e-26
 Identities = 46/259 (17%), Positives = 72/259 (27%), Gaps = 59/259 (22%)

Query: 54  GRSALHLAAEHG----YLKVCDALLTHKAFINSK----SRVGRTALHLAAMN---GYADL 102
            R  L      G       +   LLTHK  +  +       G+T L  A +N   G  D 
Sbjct: 5   NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDT 64

Query: 103 CRFLVHDHAAVIDILTL----------RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD 152
              L+       ++             R QT LH+A E       +LL++ GA + A   
Sbjct: 65  IPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQAR 124

Query: 153 Q--------------GQKPIHVAAQNNFPEVAQIFLRAHPSL---VTATTKDGNTCAHIA 195
                          G+ P+ +AA  N P +       +      +      GNT  H  
Sbjct: 125 GRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT-ENGHKQADLRRQDSRGNTVLHAL 183

Query: 196 AMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENK 255
                                   +   E T                L          N 
Sbjct: 184 VAIA--------------------DNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN 223

Query: 256 TGFTAVHLAAQNGHNQVLE 274
            G + + +AA+ G   + +
Sbjct: 224 DGLSPLMMAAKTGKIGIFQ 242

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 97.9 bits (244), Expect = 9e-23
 Identities = 40/235 (17%), Positives = 79/235 (33%), Gaps = 52/235 (22%)

Query: 7   GTEISKALNKQTSIGWTPLLIA---CNRGHMELVNTMLNNHARVDVF-----------DQ 52
              ++    ++ S G T L  A    + G  + +  +L+   +                 
Sbjct: 32  KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYY 91

Query: 53  EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAA 112
            G++ALH+A E       + L+   A +++++R             Y             
Sbjct: 92  RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFY------------- 138

Query: 113 VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG---ASIDATDDQGQKPIH--VAAQNNFP 167
                    + PL LAA   Q  +   L + G   A +   D +G   +H  VA  +N  
Sbjct: 139 -------FGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTR 191

Query: 168 EVAQIFLRAHPSLV-------------TATTKDGNTCAHIAAMQGSVGVIEELMK 209
           E  +   + +  L+                  DG +   +AA  G +G+ + +++
Sbjct: 192 ENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR 246

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 88.7 bits (220), Expect = 1e-19
 Identities = 44/272 (16%), Positives = 73/272 (26%), Gaps = 80/272 (29%)

Query: 497 GKTCLHIAATHG----HLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALH 552
            +  L    + G       ++  LL     +   +    +              G+T L 
Sbjct: 5   NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPS-------------TGKTCLP 51

Query: 553 LAAMN---GYADLCRFLVHDHAAVIDILTL----------RKQTPLHLAAEAGQLQVCKL 599
            A +N   G  D    L+       ++             R QT LH+A E       +L
Sbjct: 52  KALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVEL 111

Query: 600 LLDLGASIDATDDQ--------------GQKPIHVAAQNNFPEVAQIFL-----RAHP-- 638
           L++ GA + A                  G+ P+ +AA  N P +          +A    
Sbjct: 112 LVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR 171

Query: 639 ----------SLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRR 688
                     +LV      +E  K +         M   LL   A       +    +  
Sbjct: 172 QDSRGNTVLHALVAIADNTRENTKFVTK-------MYDLLLIKCAKLFPDTNLEALLNND 224

Query: 689 ------------NIEFLDVLIENEQKEVIAHT 708
                        I     +I  E  +  AH 
Sbjct: 225 GLSPLMMAAKTGKIGIFQHIIRREIADAAAHH 256

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 86.0 bits (213), Expect = 1e-18
 Identities = 29/167 (17%), Positives = 50/167 (29%), Gaps = 32/167 (19%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQ--------------EGRSALHLAAEHGY 66
           G T L IA  R     V  ++   A V    +               G   L LAA    
Sbjct: 93  GQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQ 152

Query: 67  LKVCDALLTH---KAFINSKSRVGRTALHLAAMNGYADLCRF--------LVHDHAAVID 115
             +   L  +   +A +  +   G T LH                     L+    A + 
Sbjct: 153 PHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212

Query: 116 ILTLRK-------QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQ 155
             T  +        +PL +AA+ G++ + + ++    +  A      
Sbjct: 213 PDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAAHHHHH 259

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  120 bits (304), Expect = 4e-32
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 4/126 (3%)

Query: 329 GELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVG 388
           G LGS         A  +G+ + V+  + + G  V+    E G  PLH A   G + ++ 
Sbjct: 1   GPLGSM-CDKEFMWALKNGDLDEVKDYV-AKGEDVNRTL-EGGRKPLHYAADCGQLEILE 57

Query: 389 LLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARY 448
            LL + AD + + DK+  T L  A   GH+  V++LL +GA+       G  +       
Sbjct: 58  FLLLKGAD-INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116

Query: 449 GHVGII 454
               ++
Sbjct: 117 AIKALL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  118 bits (299), Expect = 1e-31
 Identities = 34/161 (21%), Positives = 53/161 (32%), Gaps = 43/161 (26%)

Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG 461
                     A  +G L  V+  + +G ++N T +GG + +H AA  G + I+  LL KG
Sbjct: 4   GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG 63

Query: 462 EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
             ++                            DK+  T L  A   GH+  V++LL +GA
Sbjct: 64  ADINA--------------------------PDKHHITPLLSAVYEGHVSCVKLLLSKGA 97

Query: 522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADL 562
           +                        G TA           L
Sbjct: 98  DKTVKGP-----------------DGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  114 bits (289), Expect = 4e-30
 Identities = 32/145 (22%), Positives = 51/145 (35%), Gaps = 27/145 (18%)

Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 429
                   A   G +  V   +++  D+     + G+  LH AA  G L+++E LL +GA
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGA 64

Query: 430 EINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADL 489
           +INA DK     + +A   GHV  +  LL KG    V                       
Sbjct: 65  DINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTV----------------------- 101

Query: 490 LQSADKNGKTCLHIAATHGHLQMVE 514
                 +G T            +++
Sbjct: 102 ---KGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  114 bits (288), Expect = 4e-30
 Identities = 31/138 (22%), Positives = 44/138 (31%), Gaps = 18/138 (13%)

Query: 494 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHL 553
                     A  +G L  V+  + +G ++N T +                  GR  LH 
Sbjct: 4   GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEG-----------------GRKPLHY 46

Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
           AA  G  ++  FL+    A I+       TPL  A   G +   KLLL  GA        
Sbjct: 47  AADCGQLEILEFLL-LKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPD 105

Query: 614 GQKPIHVAAQNNFPEVAQ 631
           G              + Q
Sbjct: 106 GLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  105 bits (264), Expect = 8e-27
 Identities = 30/153 (19%), Positives = 46/153 (30%), Gaps = 34/153 (22%)

Query: 19  SIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKA 78
           S+     + A   G ++ V   +     V+   + GR  LH AA+ G L++ + LL   A
Sbjct: 5   SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA 64

Query: 79  FINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCK 138
            IN+  +   T L  A   G+                                  +   K
Sbjct: 65  DINAPDKHHITPLLSAVYEGH----------------------------------VSCVK 90

Query: 139 LLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQ 171
           LLL  GA        G              + Q
Sbjct: 91  LLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  100 bits (251), Expect = 4e-25
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 37/152 (24%)

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT 182
                A + G L   K  +  G  ++ T + G+KP+H AA     E+ + FL    + + 
Sbjct: 9   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILE-FLLLKGADIN 67

Query: 183 ATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV 242
           A  K   T                                    PL  A   GH + V++
Sbjct: 68  APDKHHIT------------------------------------PLLSAVYEGHVSCVKL 91

Query: 243 LVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
           L+  GA  T +   G TA           +L+
Sbjct: 92  LLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 95.9 bits (240), Expect = 1e-23
 Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 2/119 (1%)

Query: 87  GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146
                  A  NG  D  +  V      ++      + PLH AA+ GQL++ + LL  GA 
Sbjct: 7   CDKEFMWALKNGDLDEVKDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65

Query: 147 IDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIE 205
           I+A D     P+  A         ++ L +  +  T    DG T       Q    +++
Sbjct: 66  INAPDKHHITPLLSAVYEGHVSCVKLLL-SKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 94.4 bits (236), Expect = 4e-23
 Identities = 28/135 (20%), Positives = 46/135 (34%), Gaps = 17/135 (12%)

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSH 312
                     A +NG    +++  +    +V    + G   LH AA  GQ + +  LL  
Sbjct: 4   GSMCDKEFMWALKNGDLDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLK 62

Query: 313 VPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGY 372
                      GA        +  +TPL  A Y G+ + V+LLL S G     +   +G 
Sbjct: 63  -----------GADI--NAPDKHHITPLLSAVYEGHVSCVKLLL-SKGADKTVKG-PDGL 107

Query: 373 NPLHLACFGGHVTVV 387
                        ++
Sbjct: 108 TAFEATDNQAIKALL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 90.9 bits (227), Expect = 8e-22
 Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 15/129 (11%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
                A + G  + V+  V  G       + G   +H AA  G  ++LE +    A ++ 
Sbjct: 9   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA-DIN 67

Query: 286 SK-KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAA 344
           +  K  +T L  A Y G    V+ LLS            GA     +    G+T      
Sbjct: 68  APDKHHITPLLSAVYEGHVSCVKLLLSK-----------GADK--TVKGPDGLTAFEATD 114

Query: 345 YSGNENVVR 353
               + +++
Sbjct: 115 NQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 85.1 bits (212), Expect = 8e-20
 Identities = 21/88 (23%), Positives = 34/88 (38%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N+    G  PL  A + G +E++  +L   A ++  D+   + L  A   G++     LL
Sbjct: 34  NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLL 93

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADL 102
           +  A    K   G TA           L
Sbjct: 94  SKGADKTVKGPDGLTAFEATDNQAIKAL 121

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  119 bits (300), Expect = 8e-32
 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 43/152 (28%)

Query: 401 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQK 460
             K+G T LH AA +GH + V+ LL +GA++NA  K G   +H AA+ GH  I+  LL K
Sbjct: 5   GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK 64

Query: 461 GEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 520
           G  V+                             K+G T  H+A  +GH ++V++L  +G
Sbjct: 65  GADVNA--------------------------RSKDGNTPEHLAKKNGHHEIVKLLDAKG 98

Query: 521 AEINATDKVCDALLTHKAFINSKSRVGRTALH 552
           A++NA                          H
Sbjct: 99  ADVNARSW-----------------GSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  119 bits (300), Expect = 9e-32
 Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 3/113 (2%)

Query: 331 LGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLL 390
            GS+ G TPLH AA +G+   V+ LL S G  V+A++ ++G  PLHLA   GH  +V LL
Sbjct: 4   WGSKDGNTPLHNAAKNGHAEEVKKLL-SKGADVNARS-KDGNTPLHLAAKNGHAEIVKLL 61

Query: 391 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIH 443
           L++ AD + +  K+G T  H+A  +GH ++V++L  +GA++NA   G +   H
Sbjct: 62  LAKGAD-VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  114 bits (289), Expect = 3e-30
 Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 18/127 (14%)

Query: 493 ADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALH 552
             K+G T LH AA +GH + V+ LL +GA++NA  K                  G T LH
Sbjct: 5   GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKD-----------------GNTPLH 47

Query: 553 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD 612
           LAA NG+A++ + L+    A ++  +    TP HLA + G  ++ KLL   GA ++A   
Sbjct: 48  LAAKNGHAEIVKLLL-AKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSW 106

Query: 613 QGQKPIH 619
                 H
Sbjct: 107 GSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  102 bits (256), Expect = 7e-26
 Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 48  DVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 107
               ++G + LH AA++G+ +    LL+  A +N++S+ G T LHLAA NG+A++ + L+
Sbjct: 3   MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL 62

Query: 108 HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIH 159
               A ++  +    TP HLA + G  ++ KLL   GA ++A         H
Sbjct: 63  -AKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 99.0 bits (248), Expect = 8e-25
 Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 16/121 (13%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
           G T LH AA  G A+ V++LLS            GA       S+ G TPLHLAA +G+ 
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSK-----------GADV--NARSKDGNTPLHLAAKNGHA 55

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
            +V+LLL + G  V+A++ ++G  P HLA   GH  +V LL ++ AD + +         
Sbjct: 56  EIVKLLL-AKGADVNARS-KDGNTPEHLAKKNGHHEIVKLLDAKGAD-VNARSWGSSHHH 112

Query: 410 H 410
           H
Sbjct: 113 H 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 98.2 bits (246), Expect = 2e-24
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 1/106 (0%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           G TPL  A   GH E V  +L+  A V+   ++G + LHLAA++G+ ++   LL   A +
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV 68

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLH 126
           N++S+ G T  HLA  NG+ ++ + L     A ++  +       H
Sbjct: 69  NARSKDGNTPEHLAKKNGHHEIVKLLD-AKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 92.1 bits (230), Expect = 3e-22
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 4/116 (3%)

Query: 78  AFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVC 137
               SK   G T LH AA NG+A+  + L+    A ++  +    TPLHLAA+ G  ++ 
Sbjct: 2   HMWGSKD--GNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 138 KLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAH 193
           KLLL  GA ++A    G  P H+A +N   E+ ++   A  + V A +   +   H
Sbjct: 59  KLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLD-AKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 82.8 bits (206), Expect = 4e-19
 Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 37/141 (26%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
            TPLH AA+ G  +  K LL  GA ++A    G  P+H+AA+N   E+ ++ L A  + V
Sbjct: 10  NTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL-AKGADV 68

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
            A +KDGN                                    TP  LA + GH  +V+
Sbjct: 69  NARSKDGN------------------------------------TPEHLAKKNGHHEIVK 92

Query: 242 VLVKAGASCTDENKTGFTAVH 262
           +L   GA     +       H
Sbjct: 93  LLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 77.4 bits (192), Expect = 3e-17
 Identities = 23/78 (29%), Positives = 40/78 (51%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N ++  G TPL +A   GH E+V  +L   A V+   ++G +  HLA ++G+ ++   L 
Sbjct: 36  NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLD 95

Query: 75  THKAFINSKSRVGRTALH 92
              A +N++S       H
Sbjct: 96  AKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 72.8 bits (180), Expect = 2e-15
 Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 7/113 (6%)

Query: 185 TKDGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVL 243
           +KDGNT  H AA  G    +++L+     G  ++AR++    TPL LAA+ GHA +V++L
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLS---KGADVNARSK-DGNTPLHLAAKNGHAEIVKLL 61

Query: 244 VKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALH 295
           +  GA     +K G T  HLA +NGH+++++ + +  A +V ++        H
Sbjct: 62  LAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGA-DVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 62.8 bits (154), Expect = 4e-12
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
            TPLH AA+ G  +  K LL  GA ++A    G  P+H+AA+N   E+ ++ L
Sbjct: 10  NTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL 62

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  107 bits (269), Expect = 8e-28
 Identities = 51/95 (53%), Positives = 68/95 (71%), Gaps = 3/95 (3%)

Query: 335 SGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRA 394
           +G TPLHLAA +G+  VV+LLL  AG  V+A+  +NG  PLHLA   GH+ VV LLL   
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAG 58

Query: 395 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 429
           AD+  + DKNG+T LH+AA +GHL++V++LL  GA
Sbjct: 59  ADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  105 bits (265), Expect = 2e-27
 Identities = 47/92 (51%), Positives = 64/92 (69%), Gaps = 1/92 (1%)

Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 429
           NG  PLHLA   GH+ VV LLL   AD+  + DKNG+T LH+AA +GHL++V++LL  GA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59

Query: 430 EINATDKGGARSIHTAARYGHVGIINTLLQKG 461
           ++NA DK G   +H AAR GH+ ++  LL+ G
Sbjct: 60  DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  103 bits (259), Expect = 2e-26
 Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 26/118 (22%)

Query: 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
           NG+T LH+AA +GHL++V++LL  GA++NA DK G   +H AAR GH+ ++  LL+ G  
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 464 VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
           V+                            DKNG+T LH+AA +GHL++V++LL  GA
Sbjct: 61  VNA--------------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 96.7 bits (242), Expect = 3e-24
 Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 18/110 (16%)

Query: 496 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAA 555
           NG+T LH+AA +GHL++V++LL  GA++NA DK                  GRT LHLAA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-----------------NGRTPLHLAA 43

Query: 556 MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA 605
            NG+ ++ + L+ +  A ++      +TPLHLAA  G L+V KLLL+ GA
Sbjct: 44  RNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 90.5 bits (226), Expect = 5e-22
 Identities = 39/87 (44%), Positives = 57/87 (65%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           G TPL +A   GH+E+V  +L   A V+  D+ GR+ LHLAA +G+L+V   LL   A +
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLV 107
           N+K + GRT LHLAA NG+ ++ + L+
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLL 88

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 86.3 bits (215), Expect = 1e-20
 Identities = 40/93 (43%), Positives = 60/93 (64%), Gaps = 3/93 (3%)

Query: 87  GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 146
           GRT LHLAA NG+ ++ + L+ +  A ++      +TPLHLAA  G L+V KLLL+ GA 
Sbjct: 2   GRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 147 IDATDDQGQKPIHVAAQNNFPEVAQIFLR--AH 177
           ++A D  G+ P+H+AA+N   EV ++ L   A+
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 85.5 bits (213), Expect = 2e-20
 Identities = 45/106 (42%), Positives = 57/106 (53%), Gaps = 15/106 (14%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
           G T LH+AA  G  + V+ LL             GA        ++G TPLHLAA +G+ 
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEA-----------GADV--NAKDKNGRTPLHLAARNGHL 48

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAA 395
            VV+LLL  AG  V+A+  +NG  PLHLA   GH+ VV LLL   A
Sbjct: 49  EVVKLLL-EAGADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 85.1 bits (212), Expect = 3e-20
 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 18/94 (19%)

Query: 474 GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDAL 533
           GH+ VV LLL   AD+  + DKNG+T LH+AA +GHL++V++LL  GA++NA DK     
Sbjct: 13  GHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK----- 66

Query: 534 LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 567
                        GRT LHLAA NG+ ++ + L+
Sbjct: 67  ------------NGRTPLHLAARNGHLEVVKLLL 88

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 79.3 bits (197), Expect = 4e-18
 Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 2/88 (2%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
           TPL LAA  GH  VV++L++AGA    ++K G T +HLAA+NGH +V++ +  + A +V 
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-DVN 62

Query: 286 SK-KLGVTALHVAAYFGQADTVRELLSH 312
           +K K G T LH+AA  G  + V+ LL  
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEA 90

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 78.6 bits (195), Expect = 6e-18
 Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
           +TPLHLAA  G L+V KLLL+ GA ++A D  G+ P+H+AA+N   EV ++ L    + V
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADV 61

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEEL 207
            A  K+G T  H+AA  G + V++ L
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLL 87

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 63.5 bits (156), Expect = 1e-12
 Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 5/89 (5%)

Query: 187 DGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLVK 245
           +G T  H+AA  G + V++ L++   +G  ++A+++    TPL LAA  GH  VV++L++
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLE---AGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLE 56

Query: 246 AGASCTDENKTGFTAVHLAAQNGHNQVLE 274
           AGA    ++K G T +HLAA+NGH +V++
Sbjct: 57  AGADVNAKDKNGRTPLHLAARNGHLEVVK 85

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 63.1 bits (155), Expect = 2e-12
 Identities = 27/53 (50%), Positives = 38/53 (71%)

Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           +TPLHLAA  G L+V KLLL+ GA ++A D  G+ P+H+AA+N   EV ++ L
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 55

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 62.0 bits (152), Expect = 5e-12
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query: 15 NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
          N +   G TPL +A   GH+E+V  +L   A V+  D+ GR+ LHLAA +G+L+V   LL
Sbjct: 29 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88

Query: 75 THKAF 79
             A+
Sbjct: 89 EAGAY 93

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 99.6 bits (249), Expect = 5e-25
 Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 21/130 (16%)

Query: 504 AATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLC 563
            ++H H      L+ +G+ + +                         L  AA  G  D  
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSD--------------------LGKKLLEAARAGQDDEV 40

Query: 564 RFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQ 623
           R L+  + A +        TPLHLAA  G L+V KLLL+ GA + A D  G+    ++  
Sbjct: 41  RILM-ANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99

Query: 624 NNFPEVAQIF 633
           N   ++A+I 
Sbjct: 100 NGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 99.2 bits (248), Expect = 6e-25
 Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 30/139 (21%)

Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG 437
                H      L+ R + +      +    L  AA  G    V +L+  GA++ A DK 
Sbjct: 1   GSSHHHHHHSSGLVPRGSHM----GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKN 56

Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
           G+  +H AAR GH+                          VV LLL   AD + + DK G
Sbjct: 57  GSTPLHLAARNGHLE-------------------------VVKLLLEAGAD-VXAQDKFG 90

Query: 498 KTCLHIAATHGHLQMVEVL 516
           KT   I+  +G+  + E+L
Sbjct: 91  KTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 22/127 (17%)

Query: 474 GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDAL 533
            H      L+ R + +      +    L  AA  G    V +L+  GA++ A DK     
Sbjct: 5   HHHHHSSGLVPRGSHM----GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDK----- 55

Query: 534 LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 593
                        G T LHLAA NG+ ++ + L+ +  A +       +T   ++ + G 
Sbjct: 56  ------------NGSTPLHLAARNGHLEVVKLLL-EAGADVXAQDKFGKTAFDISIDNGN 102

Query: 594 LQVCKLL 600
             + ++L
Sbjct: 103 EDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 91.5 bits (228), Expect = 3e-22
 Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 19/128 (14%)

Query: 297 AAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLL 356
            +          L+             G+              L  AA +G ++ VR+L+
Sbjct: 1   GSSHHHHHHSSGLVPR-----------GSHM-----GSDLGKKLLEAARAGQDDEVRILM 44

Query: 357 NSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG 416
            + G  V A+  +NG  PLHLA   GH+ VV LLL   AD + + DK GKT   I+  +G
Sbjct: 45  -ANGADVAAKD-KNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAFDISIDNG 101

Query: 417 HLQMVEVL 424
           +  + E+L
Sbjct: 102 NEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 84.2 bits (209), Expect = 1e-19
 Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 28  ACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVG 87
             +  H    + ++   + +     +    L  AA  G       L+ + A + +K + G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG---SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 88  RTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
            T LHLAA NG+ ++ + L+ +  A +       +T   ++ + G   + ++L
Sbjct: 58  STPLHLAARNGHLEVVKLLL-EAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 79.5 bits (197), Expect = 5e-18
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 5/114 (4%)

Query: 94  AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 153
            + + +      LV    + +          L  AA AGQ    ++L+  GA + A D  
Sbjct: 1   GSSHHHHHHSSGLV-PRGSHMGS---DLGKKLLEAARAGQDDEVRILMANGADVAAKDKN 56

Query: 154 GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL 207
           G  P+H+AA+N   EV +  L    + V A  K G T   I+   G+  + E L
Sbjct: 57  GSTPLHLAARNGHLEVVK-LLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 79.2 bits (196), Expect = 6e-18
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 18/127 (14%)

Query: 264 AAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPT 323
            + + H+     +    + ++ S       L  AA  GQ D VR L+++           
Sbjct: 1   GSSHHHHHHSSGLVPRGS-HMGSD--LGKKLLEAARAGQDDEVRILMAN----------- 46

Query: 324 GASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGH 383
           GA        ++G TPLHLAA +G+  VV+LLL  AG  V AQ  + G     ++   G+
Sbjct: 47  GADV--AAKDKNGSTPLHLAARNGHLEVVKLLL-EAGADVXAQD-KFGKTAFDISIDNGN 102

Query: 384 VTVVGLL 390
             +  +L
Sbjct: 103 EDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 79.2 bits (196), Expect = 7e-18
 Identities = 29/86 (33%), Positives = 44/86 (51%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
               LL A   G  + V  ++ N A V   D+ G + LHLAA +G+L+V   LL   A +
Sbjct: 24  LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV 83

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFL 106
            ++ + G+TA  ++  NG  DL   L
Sbjct: 84  XAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 75.7 bits (187), Expect = 1e-16
 Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 40/150 (26%)

Query: 128 AAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKD 187
            +          L+  G+ + +      K +  AA+    +  +I + A+ + V A  K+
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGS---DLGKKLLEAARAGQDDEVRILM-ANGADVAAKDKN 56

Query: 188 GNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAG 247
           G+T                                    PL LAA  GH  VV++L++AG
Sbjct: 57  GST------------------------------------PLHLAARNGHLEVVKLLLEAG 80

Query: 248 ASCTDENKTGFTAVHLAAQNGHNQVLEEMR 277
           A    ++K G TA  ++  NG+  + E ++
Sbjct: 81  ADVXAQDKFGKTAFDISIDNGNEDLAEILQ 110

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 70.3 bits (173), Expect = 1e-14
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 554 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 613
            + + +      LV    + +          L  AA AGQ    ++L+  GA + A D  
Sbjct: 1   GSSHHHHHHSSGLV-PRGSHMGS---DLGKKLLEAARAGQDDEVRILMANGADVAAKDKN 56

Query: 614 GQKPIHVAAQNNFPEVAQIFL 634
           G  P+H+AA+N   EV ++ L
Sbjct: 57  GSTPLHLAARNGHLEVVKLLL 77

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 68.8 bits (169), Expect = 3e-14
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 8/116 (6%)

Query: 195 AAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDEN 254
            +          L+   R   + +         L  AA  G  + VR+L+  GA    ++
Sbjct: 1   GSSHHHHHHSSGLV--PRGSHMGSDLG----KKLLEAARAGQDDEVRILMANGADVAAKD 54

Query: 255 KTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVREL 309
           K G T +HLAA+NGH +V++ +  + A +V ++ K G TA  ++   G  D    L
Sbjct: 55  KNGSTPLHLAARNGHLEVVKLLLEAGA-DVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 17/59 (28%), Positives = 31/59 (52%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
             +   G TPL +A   GH+E+V  +L   A V   D+ G++A  ++ ++G   + + L
Sbjct: 51  AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 76.2 bits (187), Expect = 4e-15
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 87  GRTALHLAAMNG---YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 143
             TALHLA  +       +  FLV  ++  +D  T +  T LH        +  KLLL  
Sbjct: 169 DETALHLAVRSVDRTSLHIVDFLVQ-NSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG 227

Query: 144 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176
            ASI+  ++ G+ P+ +A +       ++  +A
Sbjct: 228 KASIEIANESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 76.2 bits (187), Expect = 4e-15
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 547 GRTALHLAAMNG---YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 603
             TALHLA  +       +  FLV  ++  +D  T +  T LH        +  KLLL  
Sbjct: 169 DETALHLAVRSVDRTSLHIVDFLVQ-NSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG 227

Query: 604 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 636
            ASI+  ++ G+ P+ +A +       ++  +A
Sbjct: 228 KASIEIANESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 71.6 bits (175), Expect = 1e-13
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 12/126 (9%)

Query: 38  NTMLNNHARVDVFDQEGRSALHLAAEHG---YLKVCDALLTHKAFINSKSRVGRTALHLA 94
              L     +    +   +ALHLA        L + D L+ +   ++ ++  G TALH  
Sbjct: 153 GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC 212

Query: 95  AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG 154
            +   A+  + L+    A I+I     +TPL +A         +LL    +        G
Sbjct: 213 CLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALS--------G 263

Query: 155 QKPIHV 160
           +   HV
Sbjct: 264 RFNSHV 269

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 70.8 bits (173), Expect = 2e-13
 Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 6/106 (5%)

Query: 365 AQTQENGYNPLHLACFGG---HVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 421
           A   E     LHLA        + +V  L+  + +L       G T LH      + + +
Sbjct: 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHYCCLTDNAECL 221

Query: 422 EVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLL--QKGEKVD 465
           ++LL   A I   ++ G   +  A R  H      L     G    
Sbjct: 222 KLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNS 267

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 70.4 bits (172), Expect = 3e-13
 Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 3/94 (3%)

Query: 18  TSIGWTPLLIAC---NRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
                T L +A    +R  + +V+ ++ N   +D    +G +ALH        +    LL
Sbjct: 166 HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL 225

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVH 108
             KA I   +  G T L +A    +      L  
Sbjct: 226 RGKASIEIANESGETPLDIAKRLKHEHCEELLTQ 259

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 60.4 bits (146), Expect = 5e-10
 Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 24/166 (14%)

Query: 455 NTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE 514
              L    +   T +          G+ L+     L +  +  +T LH+A        + 
Sbjct: 128 AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEK-IPLANGHEPDETALHLAVRSVDRTSLH 186

Query: 515 VLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVI 574
           +               D L+ +   ++ ++  G TALH   +   A+  + L+    A I
Sbjct: 187 I--------------VDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR-GKASI 231

Query: 575 DILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHV 620
           +I     +TPL +A         +LL    +        G+   HV
Sbjct: 232 EIANESGETPLDIAKRLKHEHCEELLTQALS--------GRFNSHV 269

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 55.0 bits (132), Expect = 3e-08
 Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 29/123 (23%)

Query: 398 LQSADKNGKTCLHIAATHG---HLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGII 454
           L +  +  +T LH+A        L +V+ L+     ++     G+ ++H      +   +
Sbjct: 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECL 221

Query: 455 NTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE 514
             LL+    +++                           +++G+T L IA    H    E
Sbjct: 222 KLLLRGKASIEIA--------------------------NESGETPLDIAKRLKHEHCEE 255

Query: 515 VLL 517
           +L 
Sbjct: 256 LLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 54.2 bits (130), Expect = 6e-08
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 5/99 (5%)

Query: 150 TDDQGQKPIHVAAQNNFPEVAQI--FLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL 207
             +  +  +H+A ++       I  FL  +   +   T  G+T  H   +  +   ++ L
Sbjct: 165 GHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLL 224

Query: 208 MKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKA 246
           ++      I   N   E TPL +A    H +   +L +A
Sbjct: 225 LR--GKASIEIANESGE-TPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 51.9 bits (124), Expect = 3e-07
 Identities = 15/98 (15%), Positives = 37/98 (37%)

Query: 184 TTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVL 243
             +   T  H+A        +  +    ++     +     +T L       +A  +++L
Sbjct: 165 GHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLL 224

Query: 244 VKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281
           ++  AS    N++G T + +A +  H    E +  + +
Sbjct: 225 LRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 51.5 bits (123), Expect = 5e-07
 Identities = 33/153 (21%), Positives = 55/153 (35%), Gaps = 25/153 (16%)

Query: 219 RNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKT---------GFTAVHLAAQNG- 268
           +     A  L    E      +  L++A A   D  +            TA+HLA ++  
Sbjct: 122 KKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVD 181

Query: 269 --HNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGAS 326
                +++ +  +          G TALH       A+ ++ LL              AS
Sbjct: 182 RTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG-----------KAS 230

Query: 327 FLGELGSESGMTPLHLAAYSGNENVVRLLLNSA 359
              E+ +ESG TPL +A    +E+   LL  + 
Sbjct: 231 I--EIANESGETPLDIAKRLKHEHCEELLTQAL 261

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 49.2 bits (117), Expect = 3e-06
 Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 21/123 (17%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
             TALH+A       ++  +   V  +   D  T            G T LH    + N 
Sbjct: 169 DETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQT----------GKGSTALHYCCLTDNA 218

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKT-C 408
             ++LLL      ++    E+G  PL +A    H            +LL  A        
Sbjct: 219 ECLKLLL-RGKASIEIAN-ESGETPLDIAKRLKHEHCE--------ELLTQALSGRFNSH 268

Query: 409 LHI 411
           +H+
Sbjct: 269 VHV 271

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 76.2 bits (187), Expect = 5e-15
 Identities = 28/138 (20%), Positives = 45/138 (32%), Gaps = 15/138 (10%)

Query: 502 HIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD 561
             A  +  L  V      G +        DA                  LHLA       
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDA-----------QAPEELVLHLAVKVANQA 204

Query: 562 ---LCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPI 618
              L  F++  +   +D       T LH AA   Q    KLLL   A +   ++ G+  +
Sbjct: 205 SLPLVDFIIQ-NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETAL 263

Query: 619 HVAAQNNFPEVAQIFLRA 636
            +A + +  E  ++  +A
Sbjct: 264 DIARKKHHKECEELLEQA 281

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 73.1 bits (179), Expect = 4e-14
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 87  GRTALHLAAMNGYAD---LCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 143
               LHLA          L  F++  +   +D       T LH AA   Q    KLLL  
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQ-NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKG 248

Query: 144 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176
            A +   ++ G+  + +A + +  E  ++  +A
Sbjct: 249 RALVGTVNEAGETALDIARKKHHKECEELLEQA 281

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 66.9 bits (163), Expect = 5e-12
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 7/116 (6%)

Query: 350 NVVRLLLNSAGV---QVDAQTQENGYNPLHLAC---FGGHVTVVGLLLSRAADLLQSADK 403
           +V+    N             Q      LHLA        + +V  ++     L  +   
Sbjct: 166 SVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAA 224

Query: 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ 459
           +G T LH AA +     +++LL   A +   ++ G  ++  A +  H      L Q
Sbjct: 225 DGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 63.9 bits (155), Expect = 5e-11
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 10/123 (8%)

Query: 41  LNNHARVDVFDQEGRSALHLAAEHGY---LKVCDALLTHKAFINSKSRVGRTALHLAAMN 97
                            LHLA +      L + D ++ +   +++K+  G TALH AA+ 
Sbjct: 177 FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALY 236

Query: 98  GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKP 157
              D  + L+    A++  +    +T L +A +    + C+ LL+   +          P
Sbjct: 237 NQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKE-CEELLEQAQA-----GTFAFP 289

Query: 158 IHV 160
           +HV
Sbjct: 290 LHV 292

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 60.0 bits (145), Expect = 9e-10
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 3/92 (3%)

Query: 18  TSIGWTPLLIAC---NRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
            +     L +A    N+  + LV+ ++ N   +D    +G +ALH AA +        LL
Sbjct: 187 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLL 246

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFL 106
             +A + + +  G TAL +A    + +    L
Sbjct: 247 KGRALVGTVNEAGETALDIARKKHHKECEELL 278

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 52.3 bits (125), Expect = 3e-07
 Identities = 24/163 (14%), Positives = 45/163 (27%), Gaps = 46/163 (28%)

Query: 410 HIAATHGHLQMVEVLLGQGAEINATDKG------GARSIHTAARYGHVGIINTLLQKGEK 463
             A  +  L  V      G +      G          +H A +  +             
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQA----------- 204

Query: 464 VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEI 523
                       + +V  ++     L  +   +G T LH AA +     +++LL   A +
Sbjct: 205 -----------SLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLKLLLKGRALV 252

Query: 524 NATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
              ++                  G TAL +A    + +    L
Sbjct: 253 GTVNE-----------------AGETALDIARKKHHKECEELL 278

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 48.8 bits (116), Expect = 4e-06
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           L+ + + G T L  A      + +  +L   A V   ++ G +AL +A +  + K C+ L
Sbjct: 219 LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH-KECEEL 277

Query: 74  L 74
           L
Sbjct: 278 L 278

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 20/98 (20%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 187 DGNTCAHIAAMQG---SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVL 243
                 H+A       S+ +++ +++    G + A+      T L  AA     + +++L
Sbjct: 189 PEELVLHLAVKVANQASLPLVDFIIQN--GGHLDAKA-ADGNTALHYAALYNQPDCLKLL 245

Query: 244 VKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281
           +K  A     N+ G TA+ +A +  H +  E +  ++A
Sbjct: 246 LKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA 283

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 45.8 bits (108), Expect = 4e-05
 Identities = 24/125 (19%), Positives = 38/125 (30%), Gaps = 25/125 (20%)

Query: 290 GVTALHVAAYFGQADTVR--ELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSG 347
               LH+A       ++   + +    G + +                G T LH AA   
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA------------DGNTALHYAALYN 237

Query: 348 NENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKT 407
             + ++LLL      V     E G   L +A    H            +LL+ A      
Sbjct: 238 QPDCLKLLL-KGRALVGT-VNEAGETALDIARKKHHKECE--------ELLEQAQAGTFA 287

Query: 408 -CLHI 411
             LH+
Sbjct: 288 FPLHV 292

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 43.1 bits (101), Expect = 3e-04
 Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 16/114 (14%)

Query: 249 SCTDENKTGFTAVHLAAQNGHN---QVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADT 305
              D        +HLA +  +     +++ +  +          G TALH AA + Q D 
Sbjct: 182 PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDC 241

Query: 306 VRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSA 359
           ++ LL              A       +E+G T L +A    ++    LL  + 
Sbjct: 242 LKLLLKG-----------RALV--GTVNEAGETALDIARKKHHKECEELLEQAQ 282

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 75.6 bits (185), Expect = 1e-14
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 16/146 (10%)

Query: 491 QSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTA 550
             +   G      +     L  +   L  GA++N  +                 +   T 
Sbjct: 194 LGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNG---------------GQDNATP 238

Query: 551 LHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDAT 610
           L  A        C FL+  + A ++      + PLH A   G   +  L L  GA + A 
Sbjct: 239 LIQATAANSLLACEFLLQ-NGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGAR 297

Query: 611 DDQGQKPIHVAAQNNFPEVAQIFLRA 636
           D +G+ P+ +A +    ++  +   A
Sbjct: 298 DSEGRDPLTIAMETANADIVTLLRLA 323

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 75.2 bits (184), Expect = 2e-14
 Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 3/127 (2%)

Query: 52  QEGRSALHLAAEHGYLKVCDALLTHKAFINSK--SRVGRTALHLAAMNGYADLCRFLVHD 109
             G      +     L      L H A +N     +   T L  A        C FL+  
Sbjct: 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQ- 256

Query: 110 HAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEV 169
           + A ++      + PLH A   G   +  L L  GA + A D +G+ P+ +A +    ++
Sbjct: 257 NGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADI 316

Query: 170 AQIFLRA 176
             +   A
Sbjct: 317 VTLLRLA 323

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 72.5 bits (177), Expect = 2e-13
 Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 3/115 (2%)

Query: 311 SHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQEN 370
                T+      GA      G +   TPL  A  + +      LL + G  V+      
Sbjct: 210 PPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQN-GANVNQAD-SA 267

Query: 371 GYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 425
           G  PLH A   GH  +  L L R AD L + D  G+  L IA    +  +V +L 
Sbjct: 268 GRGPLHHATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLR 321

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 66.0 bits (160), Expect = 2e-11
 Identities = 33/202 (16%), Positives = 56/202 (27%), Gaps = 29/202 (14%)

Query: 317 VKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLH 376
           +   P       G              +       +R         + +     G     
Sbjct: 148 LTKLPEIRGRRGGRGRPRGQPPVPPKPSIRPRPGSLRSKPEPPSEDLGSLHP--GALLFR 205

Query: 377 LACFGGHVTVVGLLLSRAADL-LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 435
            +     +  +   L+  AD+   +  ++  T L  A     L   E LL  GA +N  D
Sbjct: 206 ASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQAD 265

Query: 436 KGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADK 495
             G   +H A   GH G+    L++G  +                             D 
Sbjct: 266 SAGRGPLHHATILGHTGLACLFLKRGADLGAR--------------------------DS 299

Query: 496 NGKTCLHIAATHGHLQMVEVLL 517
            G+  L IA    +  +V +L 
Sbjct: 300 EGRDPLTIAMETANADIVTLLR 321

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 64.4 bits (156), Expect = 6e-11
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 2/95 (2%)

Query: 120 RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 179
              TPL  A  A  L  C+ LL  GA+++  D  G+ P+H A       +A +FL+    
Sbjct: 234 DNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD 293

Query: 180 LVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSG 214
            + A   +G     IA    +   I  L++  +  
Sbjct: 294 -LGARDSEGRDPLTIAMETANAD-IVTLLRLAKMR 326

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 64.4 bits (156), Expect = 6e-11
 Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 1/127 (0%)

Query: 333 SESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLS 392
              G      + +  +   +   L            ++   PL  A     +     LL 
Sbjct: 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQ 256

Query: 393 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452
             A++   AD  G+  LH A   GH  +  + L +GA++ A D  G   +  A    +  
Sbjct: 257 NGANV-NQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANAD 315

Query: 453 IINTLLQ 459
           I+  L  
Sbjct: 316 IVTLLRL 322

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 60.2 bits (145), Expect = 1e-09
 Identities = 24/88 (27%), Positives = 35/88 (39%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
             TPL+ A     +     +L N A V+  D  GR  LH A   G+  +    L   A +
Sbjct: 235 NATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADL 294

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVH 108
            ++   GR  L +A     AD+   L  
Sbjct: 295 GARDSEGRDPLTIAMETANADIVTLLRL 322

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 56.3 bits (135), Expect = 2e-08
 Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 3/107 (2%)

Query: 580 RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS 639
              TPL  A  A  L  C+ LL  GA+++  D  G+ P+H A       +A +FL+    
Sbjct: 234 DNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD 293

Query: 640 LVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATD 686
            + A   E      +     + +     LL LA   ++      A D
Sbjct: 294 -LGARDSEGRDPLTIAMETANAD--IVTLLRLAKMREAEAAQGQAGD 337

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 56.3 bits (135), Expect = 2e-08
 Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 6/134 (4%)

Query: 149 ATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATT--KDGNTCAHIAAMQGSVGVIEE 206
            +   G      +              AH + V      +D  T    A    S+   E 
Sbjct: 195 GSLHPGALLFRASGHPPSLP-TMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEF 253

Query: 207 LMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQ 266
           L++      ++  +      PL  A   GH  +  + +K GA     +  G   + +A +
Sbjct: 254 LLQ--NGANVNQADSAGR-GPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAME 310

Query: 267 NGHNQVLEEMRSSK 280
             +  ++  +R +K
Sbjct: 311 TANADIVTLLRLAK 324

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 52.5 bits (125), Expect = 3e-07
 Identities = 33/172 (19%), Positives = 50/172 (29%), Gaps = 45/172 (26%)

Query: 399 QSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG--GARSIHTAARYGHVGIINT 456
             +   G      +     L  +   L  GA++N  + G   A  +  A     +     
Sbjct: 194 LGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEF 253

Query: 457 LLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 516
           LLQ G  V+                            D  G+  LH A   GH  +  + 
Sbjct: 254 LLQNGANVNQA--------------------------DSAGRGPLHHATILGHTGLACLF 287

Query: 517 LGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH 568
           L +GA++ A D                   GR  L +A     AD+   L  
Sbjct: 288 LKRGADLGARD-----------------SEGRDPLTIAMETANADIVTLLRL 322

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 48.2 bits (114), Expect = 8e-06
 Identities = 29/110 (26%), Positives = 38/110 (34%), Gaps = 6/110 (5%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N+  S G  PL  A   GH  L    L   A +   D EGR  L +A E         L
Sbjct: 261 VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN-ADIVTL 319

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQT 123
           L       +K R    A   A    Y D+ R      +   + L+ R   
Sbjct: 320 LRL-----AKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHD 364

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 43.2 bits (101), Expect = 3e-04
 Identities = 21/86 (24%), Positives = 28/86 (32%)

Query: 225 ATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNV 284
           ATPL  A           L++ GA+    +  G   +H A   GH  +        A   
Sbjct: 236 ATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLG 295

Query: 285 YSKKLGVTALHVAAYFGQADTVRELL 310
                G   L +A     AD V  L 
Sbjct: 296 ARDSEGRDPLTIAMETANADIVTLLR 321

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 63.0 bits (153), Expect = 3e-10
 Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 8/127 (6%)

Query: 340 LHLAAYSGN-ENVVRLLLNSAGV---QVDAQTQENGYNPLHLACF---GGHVTVVGLLLS 392
           L  A  + +  +V+    N             Q      LHLA        + +V  ++ 
Sbjct: 136 LWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ 195

Query: 393 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452
               L  +   +G T LH AA +     +++LL   A +   ++ G  ++  A +  H  
Sbjct: 196 NGGHL-DAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 254

Query: 453 IINTLLQ 459
               L Q
Sbjct: 255 CEELLEQ 261

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 44.1 bits (104), Expect = 2e-04
 Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 6/98 (6%)

Query: 186 KDGNTCAHIA---AMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV 242
                  H+A   A Q S+ +++ +++    G + A+      T L  AA     + +++
Sbjct: 169 APEELVLHLAVKVANQASLPLVDFIIQN--GGHLDAKAA-DGNTALHYAALYNQPDCLKL 225

Query: 243 LVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSK 280
           L+K  A     N+ G TA+ +A +  H +  E +  ++
Sbjct: 226 LLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 263

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 42.2 bits (99), Expect = 7e-04
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 142 DLGASIDATDDQ--GQKPIHVAAQNNFPEVAQI--FLRAHPSLVTATTKDGNTCAHIAAM 197
           D G  +   D Q   +  +H+A +        +  F+  +   + A   DGNT  H AA+
Sbjct: 157 DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAAL 216

Query: 198 QGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKA 246
                 ++ L+K     ++   N   E T L +A +  H     +L +A
Sbjct: 217 YNQPDCLKLLLK--GRALVGTVNEAGE-TALDIARKKHHKECEELLEQA 262

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 4e-05
 Identities = 58/353 (16%), Positives = 107/353 (30%), Gaps = 105/353 (29%)

Query: 676  DSAGRILTATDRRNI----------EFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNW- 724
            D    IL+  +  +I            L   + ++Q+E+     VQ++++E+ + +  + 
Sbjct: 40   DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM-----VQKFVEEVLRINYKFL 94

Query: 725  -AAWKTMLLFLTFILCPPVWICFTLSLGHKYNKVPIIKFMSYLTSHMYLMFLLMLVGITP 783
             +  KT                          + P +    Y+     L        +  
Sbjct: 95   MSPIKTE------------------------QRQPSMMTRMYIEQRDRLY---NDNQVFA 127

Query: 784  IYPVVRPNLVPYWYEWTLLVWLSGLLLFELTNPSDKSGLGWVKLAVLLFGIFG-----VA 838
             Y V R           L   L  L       P+           VL+ G+ G     VA
Sbjct: 128  KYNVSRLQPY-----LKLRQALLEL------RPAKN---------VLIDGVLGSGKTWVA 167

Query: 839  LHLLEYTFILSEGKITTHLLPFQFVY--NLMVCSKNHNNKPMEEFVLMSPAPVDTAAKLS 896
            L       +    K+    + F+ ++  NL  C+       M + +L    P  T+    
Sbjct: 168  LD------VCLSYKVQCK-MDFK-IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219

Query: 897  SIYITLATKE-KERAKDLIAAGKHCEGMATELLAL-------AAGA-DSAGRILTATDRR 947
            S  I L     +   + L+ +  +       LL L       A  A + + +IL  T  R
Sbjct: 220  SSNIKLRIHSIQAELRRLLKSKPYENC----LLVLLNVQNAKAWNAFNLSCKILLTT--R 273

Query: 948  NIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPP 1000
              +  D L       +           +    +L     +   L L ++ C P
Sbjct: 274  FKQVTDFLSAATTTHIS---------LDHHSMTLTPD--EVKSLLLKYLDCRP 315

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 2e-04
 Identities = 83/562 (14%), Positives = 148/562 (26%), Gaps = 151/562 (26%)

Query: 462 EKVDVTTNN---LACGHVTVVGLLLS-RAADLLQSADKN-----------GKTCLHIAAT 506
           E+ D   N+    A  +V+ +   L  R A  L                 GKT +  A  
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQA--LLELRPAKNVLIDGVLGSGKTWV--AL- 168

Query: 507 HGHLQMVEVLLGQGAEINATDKVCDALLTHKAF-INSKSRVGRTALHLAAMNGYADLCRF 565
                  +V L    +     K+         F +N           L  +     L   
Sbjct: 169 -------DVCLSYKVQCKMDFKI---------FWLNL-KNCNSPETVLEMLQ---KLLYQ 208

Query: 566 LVHDHAAVIDILTLRKQTPLHLAAEAGQL-------QVCKLLLDLGASIDATDDQGQKPI 618
           +  +  +  D         L + +   +L            LL L        +      
Sbjct: 209 IDPNWTSRSDHS---SNIKLRIHSIQAELRRLLKSKPYENCLLVL-------LN------ 252

Query: 619 HVAAQNNFPEVAQIF-LRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADS 677
            V  QN   +    F L     L+  TT+ K+    L AA                    
Sbjct: 253 -V--QN--AKAWNAFNLSC-KILL--TTRFKQVTDFLSAA-------------------- 284

Query: 678 AGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFI 737
                T T          L  +E K ++      +YL +     L      T    L+ I
Sbjct: 285 -----TTTHISLDHHSMTLTPDEVKSLLL-----KYL-DCRPQDLPREVLTTNPRRLSII 333

Query: 738 --LC---PPVWICFTLSLGHKYNKVPIIKFMSYLTS----HMYLMFLLMLVGITPIYPVV 788
                     W  +      K   + I   ++ L       M+    +       I  ++
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTI-IESSLNVLEPAEYRKMFDRLSVFPPS-AHIPTIL 391

Query: 789 RPNLVPYWYEWTLLVWLSGLLLFELTNPSDKSGL--GWVKLAVLLFGIFGVALHLLEYTF 846
              L   W++      +    +  + N   K  L     K       I  + L L     
Sbjct: 392 ---LSLIWFD------VIKSDVMVVVNKLHKYSLVEKQPKE--STISIPSIYLELK---- 436

Query: 847 ILSEGKITTHLLPFQFV--YNLMVCSKNHNNKPMEE------FV---LMSPAPVDTAAKL 895
           +  E +   H      V  YN+     + +  P          +   L +    +     
Sbjct: 437 VKLENEYALHR---SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF 493

Query: 896 SSIYITLA-TKEKERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDV 954
             +++     ++K R      A      +   L  L              +R     LD 
Sbjct: 494 RMVFLDFRFLEQKIRHDST--AWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF 551

Query: 955 LIENEQKEVIA-HT-VVQRYLQ 974
           L + E+  + + +T +++  L 
Sbjct: 552 LPKIEENLICSKYTDLLRIALM 573

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 2e-04
 Identities = 67/507 (13%), Positives = 132/507 (26%), Gaps = 164/507 (32%)

Query: 54  GRSALHLAAEHGYLKVCDALLTHKAFIN-----SKSRVGRTALHLAAMNGYADLCRFLVH 108
           G++ +  A +     VC +              +          L  +     L   +  
Sbjct: 162 GKTWV--ALD-----VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ---KLLYQIDP 211

Query: 109 DHAAVIDILTLRKQTPLHLAAEAGQL-------QVCKLLLDLGASIDATDDQGQKPIHVA 161
           +  +  D         L + +   +L            LL L        +       V 
Sbjct: 212 NWTSRSDHS---SNIKLRIHSIQAELRRLLKSKPYENCLLVL-------LN-------V- 253

Query: 162 AQNNFPEVAQIF-LRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMK-FDRSGVISAR 219
            QN   +    F L     L+T  T+       ++A   +   ++          V S  
Sbjct: 254 -QN--AKAWNAFNLSC-KILLT--TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307

Query: 220 NRVTEATPLQLAAE--GGHANVVRVLVKAGASCTDENKTGFTAVHLAAQN----GHNQVL 273
            +  +  P  L  E    +   + ++     S  D   T          N      +++ 
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSII---AESIRDGLAT--------WDNWKHVNCDKLT 356

Query: 274 EEMRSS-KALN------VYSKKLGVTALHVAAYFGQADTVRELLSHVPGTV------KSD 320
             + SS   L       ++  +L V        F           H+P  +         
Sbjct: 357 TIIESSLNVLEPAEYRKMF-DRLSV--------F-PPSA------HIPTILLSLIWFDVI 400

Query: 321 PPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLH---L 377
                  + +L   S      L      E+ + +      + ++ + +      LH   +
Sbjct: 401 KSDVMVVVNKLHKYS------LVEKQPKESTISIP----SIYLELKVKLENEYALHRSIV 450

Query: 378 ACFGGHVTVVGLLLSRAADLLQSADKNGKT--------CLHIAATHGHLQMVEVLLGQGA 429
             +               ++ ++ D +             HI   H HL+ +E       
Sbjct: 451 DHY---------------NIPKTFDSDDLIPPYLDQYFYSHIG--H-HLKNIE----HPE 488

Query: 430 EINATDKG-------GARSIHTA-ARYGHVGIINTLLQ----KG----------EKVDVT 467
            +               +  H + A      I+NTL Q    K             V+  
Sbjct: 489 RMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI 548

Query: 468 TNNL-ACGHVTVVGLLLSRAADLLQSA 493
            + L          L+ S+  DLL+ A
Sbjct: 549 LDFLPKIEEN----LICSKYTDLLRIA 571

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	1015
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.97
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.97
2rfa_A	232	Transient receptor potential cation channel subfa	99.97
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.97
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.97
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.97
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.97
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.97
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.97
2rfa_A	232	Transient receptor potential cation channel subfa	99.97
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.97
2etb_A	256	Transient receptor potential cation channel subfam	99.96
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.96
2etb_A	256	Transient receptor potential cation channel subfam	99.96
2pnn_A	273	Transient receptor potential cation channel subfa	99.96
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.96
2pnn_A	273	Transient receptor potential cation channel subfa	99.95
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.95
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.95
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.95
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.95
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.95
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.95
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.94
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.94
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.94
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.94
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.94
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.93
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.93
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.93
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.93
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.93
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.93
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.93
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.93
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.93
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.92
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.92
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.92
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.92
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.91
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.91
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.91
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.91
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.9
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.89
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.89
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.89
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.88
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.87
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.87
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.86
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.86
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.85
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.85
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.85
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.85
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.85
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.85
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.85
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.84
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.83
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.82
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.8
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.8
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.78
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.78
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.78
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.77
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.76
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.76
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.76
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.75
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.73
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.72
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.69
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.58

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=3.9e-56  Score=515.83  Aligned_cols=395  Identities=33%  Similarity=0.479  Sum_probs=332.1

Q ss_pred             hhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy14874         13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALH   92 (1015)
Q Consensus        13 ~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~   92 (1015)
                      .+|..+..|+||||.||..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||
T Consensus         6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~   85 (437)
T 1n11_A            6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLH   85 (437)
T ss_dssp             ---------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHH
T ss_pred             CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHH
Q psy14874         93 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI  172 (1015)
Q Consensus        93 ~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~  172 (1015)
                      +|+..|+.+++++|++ .+++++..+..|.||||+|+..|+.+++++|++.|++.+..+..|.||||+|+..|+.+++++
T Consensus        86 ~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~  164 (437)
T 1n11_A           86 CAARIGHTNMVKLLLE-NNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAEL  164 (437)
T ss_dssp             HHHHHTCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             HHHHCCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHH
Confidence            9999999999999995 578889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy14874        173 FLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD  252 (1015)
Q Consensus       173 Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~  252 (1015)
                      |++++.+ .+..+..|.||||+|+..|+.+++++|++.+....   ..+..+.||||.|+..|+.+++++|+++|++++.
T Consensus       165 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~  240 (437)
T 1n11_A          165 LLERDAH-PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH---SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA  240 (437)
T ss_dssp             HHHTTCC-TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSC---CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             HHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence            9998876 56677778888888888888887777777655432   2233566777777777777777777777777777


Q ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccC
Q psy14874        253 ENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELG  332 (1015)
Q Consensus       253 ~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~  332 (1015)
                      .+..|.|||++|+..|+.+++++|++.+++...                                              .
T Consensus       241 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~----------------------------------------------~  274 (437)
T 1n11_A          241 ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL----------------------------------------------G  274 (437)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC----------------------------------------------C
T ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCC----------------------------------------------C
Confidence            777777777777777777777776665543222                                              2


Q ss_pred             CCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHH
Q psy14874        333 SESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIA  412 (1015)
Q Consensus       333 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A  412 (1015)
                      +..|.||||+|+..|+.+++++|++. |.+++.. +..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|
T Consensus       275 ~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~L~~A  351 (437)
T 1n11_A          275 NKSGLTPLHLVAQEGHVPVADVLIKH-GVMVDAT-TRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQA  351 (437)
T ss_dssp             CTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCC-CSSCCCHHHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHhC-CccCCCC-CCCCCCHHHHHHHcCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHH
Confidence            34577888888888888888888864 7777754 56789999999999999999999999988 678899999999999


Q ss_pred             HHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcC
Q psy14874        413 ATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG  461 (1015)
Q Consensus       413 ~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g  461 (1015)
                      +..|+.+++++|+++|++++.+|..|.||+++|++.|+.+++++|....
T Consensus       352 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~  400 (437)
T 1n11_A          352 AQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT  400 (437)
T ss_dssp             HHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred             HHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999999987654

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=4.2e-56  Score=515.57  Aligned_cols=397  Identities=32%  Similarity=0.455  Sum_probs=308.9

Q ss_pred             hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCC
Q psy14874         42 NNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK  121 (1015)
Q Consensus        42 ~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g  121 (1015)
                      +.|++++..+.+|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|++ .+.+++..+..|
T Consensus         2 ~~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g   80 (437)
T 1n11_A            2 SPGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQ-NKAKVNAKAKDD   80 (437)
T ss_dssp             -------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHH-HTCCSSCCCTTS
T ss_pred             CCCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCC
Confidence            3578899899999999999999999999999999999999999999999999999999999999995 578889999999


Q ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCH
Q psy14874        122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSV  201 (1015)
Q Consensus       122 ~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~  201 (1015)
                      .||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+.+. ...+.               
T Consensus        81 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~---------------  144 (437)
T 1n11_A           81 QTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQ-ACMTK---------------  144 (437)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT---------------
T ss_pred             CCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-cCCCC---------------
Confidence            99999999999999999999999999999999999999999999999999999876652 22233               


Q ss_pred             HHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Q psy14874        202 GVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA  281 (1015)
Q Consensus       202 ~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~  281 (1015)
                                           .|.||||.|+..|+.+++++|+++|++++..+..|.|||+.|+..++.+++++|++.+.
T Consensus       145 ---------------------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  203 (437)
T 1n11_A          145 ---------------------KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGG  203 (437)
T ss_dssp             ---------------------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTC
T ss_pred             ---------------------CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence                                 34566666777777777777777777777777777777777777777777777776654


Q ss_pred             ccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCC
Q psy14874        282 LNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGV  361 (1015)
Q Consensus       282 ~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~  361 (1015)
                      .....+                                              ..|.||||+|+..|+.+++++|++ .|.
T Consensus       204 ~~~~~~----------------------------------------------~~g~t~L~~A~~~~~~~~~~~Ll~-~g~  236 (437)
T 1n11_A          204 SPHSPA----------------------------------------------WNGYTPLHIAAKQNQVEVARSLLQ-YGG  236 (437)
T ss_dssp             CSCCCC----------------------------------------------TTCCCHHHHHHHTTCHHHHHHHHH-TTC
T ss_pred             CCCCcC----------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHH-cCC
Confidence            332222                                              235556666666666666666664 355


Q ss_pred             CcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCH
Q psy14874        362 QVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARS  441 (1015)
Q Consensus       362 ~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~  441 (1015)
                      +++.. +..|.||||+|+..|+.+++++|++++++ .+..+..|.||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus       237 ~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~  314 (437)
T 1n11_A          237 SANAE-SVQGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTP  314 (437)
T ss_dssp             CTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCH
T ss_pred             CCCCC-CCCCCCHHHHHHHCCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCH
Confidence            55533 34577777777777777777777777776 46677888888888888888888888888888888888888888


Q ss_pred             HHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q psy14874        442 IHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA  521 (1015)
Q Consensus       442 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga  521 (1015)
                      ||+|+..|+.+++++|+++|++++..                          |..|.||||+|+..|+.++|++|+++|+
T Consensus       315 L~~A~~~g~~~~v~~Ll~~gad~n~~--------------------------~~~g~t~L~~A~~~g~~~iv~~Ll~~ga  368 (437)
T 1n11_A          315 LHVASHYGNIKLVKFLLQHQADVNAK--------------------------TKLGYSPLHQAAQQGHTDIVTLLLKNGA  368 (437)
T ss_dssp             HHHHHHSSCSHHHHHHHHTTCCTTCC--------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHHHHHcCcHHHHHHHHhcCCCCCCC--------------------------CCCCCCHHHHHHHCChHHHHHHHHHCcC
Confidence            88888888888888888888887754                          6778899999999999999999999888


Q ss_pred             CCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHh
Q psy14874        522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH  568 (1015)
Q Consensus       522 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  568 (1015)
                      ++                 +.++..|.|||++|+..|+.+++++|..
T Consensus       369 ~~-----------------~~~~~~g~t~l~~A~~~g~~~~~~~l~~  398 (437)
T 1n11_A          369 SP-----------------NEVSSDGTTPLAIAKRLGYISVTDVLKV  398 (437)
T ss_dssp             CS-----------------CCCCSSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             CC-----------------CCCCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence            88                 4456678888888888888877777754

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=1.5e-39  Score=362.53  Aligned_cols=262  Identities=21%  Similarity=0.243  Sum_probs=200.8

Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874         18 TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQ-EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM   96 (1015)
Q Consensus        18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~-~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~   96 (1015)
                      +..|.||||.||+.|++++|++|+++|+++|..+. .|+||||+|+..|+.++|++|+++|++++.++..+.++++.++.
T Consensus        22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~  101 (337)
T 4g8k_A           22 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAI  101 (337)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHh
Confidence            34578999999999999999999999999998875 48999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC----------CCCcHHHHHHHcCC
Q psy14874         97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD----------QGQKPIHVAAQNNF  166 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~----------~~~t~L~~A~~~g~  166 (1015)
                      .++.+++..++ ..+.+++..+..|.||||+|+..|+.+++++|+++|++++..+.          .|.||||+|+..|+
T Consensus       102 ~~~~~~~~~~~-~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~  180 (337)
T 4g8k_A          102 AGSVKLLKLFL-SKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH  180 (337)
T ss_dssp             HTCHHHHHHHH-TTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred             cccchhhHHhh-hccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC
Confidence            99999999998 56788999999999999999999999999999999999876543          45666666666666


Q ss_pred             hHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy14874        167 PEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKA  246 (1015)
Q Consensus       167 ~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  246 (1015)
                      .+++++|+++....++..+..|.|+++.++..+..                                .+...++++|+++
T Consensus       181 ~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~--------------------------------~~~~~i~~lLl~~  228 (337)
T 4g8k_A          181 VEVLKILLDEMGADVNACDNMGRNALIHALLSSDD--------------------------------SDVEAITHLLLDH  228 (337)
T ss_dssp             HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT--------------------------------TTHHHHHHHHHHT
T ss_pred             HHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc--------------------------------ccHHHHHHHHHHC
Confidence            66666666543333555555566655554432210                                0113567778888


Q ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCccccccccCCCHHHHHHHcCCHHHHHHHHhc
Q psy14874        247 GASCTDENKTGFTAVHLAAQNGHNQVLEEMRSS-KALNVYSKKLGVTALHVAAYFGQADTVRELLSH  312 (1015)
Q Consensus       247 ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~-~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~  312 (1015)
                      |++++.++..|.||||+|+..|+.++++.|++. +.+....+..|.||||+|+..|+.+++++|+++
T Consensus       229 gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~  295 (337)
T 4g8k_A          229 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR  295 (337)
T ss_dssp             TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT
T ss_pred             CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence            888888888888888888888877777777764 334444444444444444444444444444444

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=5.3e-39  Score=358.00  Aligned_cols=300  Identities=28%  Similarity=0.351  Sum_probs=213.2

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcC
Q psy14874        121 KQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ-GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG  199 (1015)
Q Consensus       121 g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~-~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g  199 (1015)
                      |.|+|+.|+++|+.++|++|+++|+|+|.++.. |+||||+|+..|+.+++++|++++.+ +...+..+.++++      
T Consensus        25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~~~~~~~~------   97 (337)
T 4g8k_A           25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFI------   97 (337)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHH------
T ss_pred             CChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhhccCCCchhH------
Confidence            456677777777777777777777776666543 66666666666666666666666554 2333333333333      


Q ss_pred             CHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy14874        200 SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSS  279 (1015)
Q Consensus       200 ~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~  279 (1015)
                                                    .++..+...++..+++.+++++..|..|.||++.|+..|+.+++++|++.
T Consensus        98 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~  147 (337)
T 4g8k_A           98 ------------------------------LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR  147 (337)
T ss_dssp             ------------------------------HHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT
T ss_pred             ------------------------------HHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHc
Confidence                                          33333344444444444455555555555555555555555555555555


Q ss_pred             CCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhc
Q psy14874        280 KALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSA  359 (1015)
Q Consensus       280 ~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~  359 (1015)
                      ++...........                                    .......|.||||+|+..|+.++|++|+++.
T Consensus       148 ga~~~~~~~~~~~------------------------------------~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~  191 (337)
T 4g8k_A          148 GANVNLRRKTKED------------------------------------QERLRKGGATALMDAAEKGHVEVLKILLDEM  191 (337)
T ss_dssp             TCCTTCCCCCC-----------------------------------------CTTCSCCHHHHHHHHTCHHHHHHHHHHS
T ss_pred             CCCcchhhccccc------------------------------------cccccCCCCcHHHHHHHCCCHHHHHHHHhcc
Confidence            4432221111000                                    0112346889999999999999999999878


Q ss_pred             CCCcccccccCCccHHHHHHhCCC----HHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhC-CCCcccC
Q psy14874        360 GVQVDAQTQENGYNPLHLACFGGH----VTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ-GAEINAT  434 (1015)
Q Consensus       360 g~~~~~~~~~~g~tpL~~A~~~g~----~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~i~~~  434 (1015)
                      |++++.. +..|.|+++.++..+.    .+++++|+++|++ ++..+..|.||||+|+..|+.++++.|++. |++++.+
T Consensus       192 gad~n~~-d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~  269 (337)
T 4g8k_A          192 GADVNAC-DNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT  269 (337)
T ss_dssp             CCCTTCC-CTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCB
T ss_pred             CCCcCcc-CCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCc
Confidence            9998864 5678899988765433    4688999999998 688899999999999999999999999985 8999999


Q ss_pred             CCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHH
Q psy14874        435 DKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE  514 (1015)
Q Consensus       435 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~  514 (1015)
                      |..|.||||+|++.|+.+++++|+++|++++.                               .+|||.|+.+|+.++|+
T Consensus       270 d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-------------------------------~~~L~~A~~~~~~~iv~  318 (337)
T 4g8k_A          270 DSDGKTALLLAVELKLKKIAELLCKRGASTDC-------------------------------GDLVMTARRNYDHSLVK  318 (337)
T ss_dssp             CTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-------------------------------CCHHHHHHHTTCHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-------------------------------CCHHHHHHHcCCHHHHH
Confidence            99999999999999999999999999998763                               37999999999999999


Q ss_pred             HHHhcCCCCcch
Q psy14874        515 VLLGQGAEINAT  526 (1015)
Q Consensus       515 ~Ll~~ga~~~~~  526 (1015)
                      +|+++||++|..
T Consensus       319 ~Ll~~GA~~d~~  330 (337)
T 4g8k_A          319 VLLSHGAKEDFH  330 (337)
T ss_dssp             HHHHTTCCC---
T ss_pred             HHHHCcCCCCCC
Confidence            999999999764

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=3.2e-38  Score=354.15  Aligned_cols=283  Identities=27%  Similarity=0.357  Sum_probs=247.1

Q ss_pred             ccCCCCCCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874         15 NKQTSIGWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL   93 (1015)
Q Consensus        15 n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~   93 (1015)
                      +..+..|.|+||.||+.|+.+.|+.|+.. +.+++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+
T Consensus        18 ~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~   97 (351)
T 3utm_A           18 VLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHN   97 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred             eeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence            44567788999999999999999998886 78999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHH
Q psy14874         94 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF  173 (1015)
Q Consensus        94 A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~L  173 (1015)
                      |+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.+|+++|+..+..+.+++.
T Consensus        98 A~~~g~~~iv~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~  176 (351)
T 3utm_A           98 ACSYGHYEVTELLLK-HGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYE  176 (351)
T ss_dssp             HHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHH
T ss_pred             HHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhh
Confidence            999999999999995 5888999999999999999999999999999999999999999999999999998888888876


Q ss_pred             hhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCC
Q psy14874        174 LRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEG---GHANVVRVLVKAGASC  250 (1015)
Q Consensus       174 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~---g~~~iv~~Ll~~ga~~  250 (1015)
                      ..             .+++..++..++.+.++.++.....   ....+..+.||||.|+..   +..+++++|+++|+++
T Consensus       177 ~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~  240 (351)
T 3utm_A          177 FK-------------GHSLLQAAREADLAKVKKTLALEII---NFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV  240 (351)
T ss_dssp             HH-------------HHHHHHHHHTTCHHHHHHHTTTCCT---TCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT
T ss_pred             hc-------------ccHHHHHHHhccHHHHHHHHHhhcc---cccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc
Confidence            54             2467888899999999988875432   233455788999999999   5589999999999999


Q ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy14874        251 TDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVP  314 (1015)
Q Consensus       251 ~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~  314 (1015)
                      +..+..|.||||+|+..|+.+++++|++.+++....+..|.||||+|+..|+.+++++|++++.
T Consensus       241 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga  304 (351)
T 3utm_A          241 NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS  304 (351)
T ss_dssp             TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence            9999999999999999999999999999987766666666666666666666666666666544

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=7.4e-39  Score=359.35  Aligned_cols=311  Identities=28%  Similarity=0.320  Sum_probs=217.1

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy14874         83 KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAA  162 (1015)
Q Consensus        83 ~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~  162 (1015)
                      .+..+.|+||.|+..|+.+.++.|+...+.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+
T Consensus        20 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~   99 (351)
T 3utm_A           20 TGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNAC   99 (351)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             eccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Confidence            34456677777777777777777776666667777777777777777777777777777777777777777777777777


Q ss_pred             HcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHH
Q psy14874        163 QNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV  242 (1015)
Q Consensus       163 ~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~  242 (1015)
                      ..|+.+++++|++++.+ ++..+                                    ..|.||||+|+..|+.+++++
T Consensus       100 ~~g~~~iv~~Ll~~g~~-~~~~~------------------------------------~~g~t~L~~A~~~~~~~~v~~  142 (351)
T 3utm_A          100 SYGHYEVTELLLKHGAC-VNAMD------------------------------------LWQFTPLHEAASKNRVEVCSL  142 (351)
T ss_dssp             HTTCHHHHHHHHHTTCC-TTCCC------------------------------------TTCCCHHHHHHHTTCHHHHHH
T ss_pred             HCCCHHHHHHHHHCCCC-CCCCC------------------------------------CCCCCHHHHHHHcCCHHHHHH
Confidence            77777777777776554 22222                                    234567777777777788888


Q ss_pred             HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q psy14874        243 LVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPP  322 (1015)
Q Consensus       243 Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~  322 (1015)
                      |+++|++++..+..|.+|++.|+..+..+.+.+....                                           
T Consensus       143 Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~-------------------------------------------  179 (351)
T 3utm_A          143 LLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG-------------------------------------------  179 (351)
T ss_dssp             HHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH-------------------------------------------
T ss_pred             HHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc-------------------------------------------
Confidence            8888888888888888888888766555555443321                                           


Q ss_pred             CCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhC---CCHHHHHHHHHhcchhhc
Q psy14874        323 TGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFG---GHVTVVGLLLSRAADLLQ  399 (1015)
Q Consensus       323 ~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~---g~~~iv~~Ll~~~~~~~~  399 (1015)
                                     .++..++..++.+.++.++.....+.  ..+..|.||||+|+..   +..+++++|++.+.+ ++
T Consensus       180 ---------------~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~-~~  241 (351)
T 3utm_A          180 ---------------HSLLQAAREADLAKVKKTLALEIINF--KQPQSHETALHCAVASLHPKRKQVAELLLRKGAN-VN  241 (351)
T ss_dssp             ---------------HHHHHHHHTTCHHHHHHHTTTCCTTC--CCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC-TT
T ss_pred             ---------------cHHHHHHHhccHHHHHHHHHhhcccc--cCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC-cC
Confidence                           13334444444444444443322221  2344566777777776   446777777777777 56


Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHH
Q psy14874        400 SADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVV  479 (1015)
Q Consensus       400 ~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~  479 (1015)
                      ..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..            
T Consensus       242 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~------------  309 (351)
T 3utm_A          242 EKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSII------------  309 (351)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC------------
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCc------------
Confidence            67778888888888888888888888888888888888888888888888888888888888877654            


Q ss_pred             HHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q psy14874        480 GLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA  521 (1015)
Q Consensus       480 ~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga  521 (1015)
                                    |..|.||+++|    ..+++++|.+.+.
T Consensus       310 --------------~~~g~tal~~a----~~~~~~~l~~~~~  333 (351)
T 3utm_A          310 --------------SLQGFTAAQMG----NEAVQQILSESTP  333 (351)
T ss_dssp             --------------CTTSCCHHHHS----CHHHHHHHHHC--
T ss_pred             --------------CCCCCChhhhh----hHHHHHHHHhccc
Confidence                          67788888886    5677777777653

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=7.9e-38  Score=339.70  Aligned_cols=265  Identities=23%  Similarity=0.252  Sum_probs=239.9

Q ss_pred             CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy14874         19 SIGWTPLLIACNRGHMELVNTMLNNHARVDVF-DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN   97 (1015)
Q Consensus        19 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~   97 (1015)
                      .+|.||||.|++.|+.++|++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus         3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   82 (285)
T 1wdy_A            3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA   82 (285)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred             cccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence            35889999999999999999999999999987 88899999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC----------CCCCCcHHHHHHHcCCh
Q psy14874         98 GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDAT----------DDQGQKPIHVAAQNNFP  167 (1015)
Q Consensus        98 g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~----------d~~~~t~L~~A~~~g~~  167 (1015)
                      |+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..          +..|.||||+|+..|+.
T Consensus        83 ~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~  161 (285)
T 1wdy_A           83 GSVKLLKLFLS-KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV  161 (285)
T ss_dssp             TCHHHHHHHHH-TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred             CCHHHHHHHHH-cCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCH
Confidence            99999999995 67889999999999999999999999999999999999987          77899999999999999


Q ss_pred             HHHHHHhhcCCCCcccCCCCCchHHHHHHHcCC----HHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy14874        168 EVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGS----VGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVL  243 (1015)
Q Consensus       168 ~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~----~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~L  243 (1015)
                      +++++|++..+..++..+..|.||||+|+..++    .+++++|++.+.+..   ..+..|.||||+|++.|+.+++++|
T Consensus       162 ~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~L  238 (285)
T 1wdy_A          162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN---VRGERGKTPLILAVEKKHLGLVQRL  238 (285)
T ss_dssp             HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS---CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCC---CcCCCCCcHHHHHHHcCCHHHHHHH
Confidence            999999998555578888999999999999998    889999998766533   3345688999999999999999999


Q ss_pred             HH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccccc
Q psy14874        244 VK-AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK  287 (1015)
Q Consensus       244 l~-~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~  287 (1015)
                      ++ .|++++..|..|.|||++|++.++.+++++|+++|++....+
T Consensus       239 l~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d  283 (285)
T 1wdy_A          239 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             HHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             HhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence            98 899999999999999999999999999999999888665543

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=6e-37  Score=332.76  Aligned_cols=270  Identities=29%  Similarity=0.441  Sum_probs=246.2

Q ss_pred             CCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHH
Q psy14874        335 SGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAAT  414 (1015)
Q Consensus       335 ~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~  414 (1015)
                      .|.++|+.|+..|+.+++++|++. |.+++...+..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+.
T Consensus         4 ~g~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~   81 (285)
T 1wdy_A            4 EDNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAAI   81 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHH
Confidence            467999999999999999999975 8888877678899999999999999999999999998 57788999999999999


Q ss_pred             cCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcC
Q psy14874        415 HGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSAD  494 (1015)
Q Consensus       415 ~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~  494 (1015)
                      .|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++.....                .......+
T Consensus        82 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~----------------~~~~~~~~  145 (285)
T 1wdy_A           82 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKT----------------KEDQERLR  145 (285)
T ss_dssp             HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCC----------------CHHHHHTT
T ss_pred             cCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCccccccc----------------HHHHHhhc
Confidence            99999999999999999999999999999999999999999999999998765321                11223447


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhc-CCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCc----HHHHHHHHhc
Q psy14874        495 KNGKTCLHIAATHGHLQMVEVLLGQ-GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGY----ADLCRFLVHD  569 (1015)
Q Consensus       495 ~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~  569 (1015)
                      ..|.||||.|+..|+.+++++|+++ |+++                 +..+..|.||||+|+..++    .+++++|++.
T Consensus       146 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-----------------~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~  208 (285)
T 1wdy_A          146 KGGATALMDAAEKGHVEVLKILLDEMGADV-----------------NACDNMGRNALIHALLSSDDSDVEAITHLLLDH  208 (285)
T ss_dssp             CCCCCHHHHHHHHTCHHHHHHHHHTSCCCT-----------------TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT
T ss_pred             cCCCcHHHHHHHcCCHHHHHHHHHhcCCCC-----------------CccCCCCCCHHHHHHHccccchHHHHHHHHHHc
Confidence            8899999999999999999999997 8888                 5567789999999999999    9999999976


Q ss_pred             CCccccccccCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCcc
Q psy14874        570 HAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL  640 (1015)
Q Consensus       570 ~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~~  640 (1015)
                      +. +++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++.+++++|++++.+.
T Consensus       209 g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~  279 (285)
T 1wdy_A          209 GA-DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST  279 (285)
T ss_dssp             TC-CSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCS
T ss_pred             CC-CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC
Confidence            54 568888999999999999999999999999 89999999999999999999999999999999988654

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=3.9e-38  Score=355.21  Aligned_cols=266  Identities=25%  Similarity=0.351  Sum_probs=226.5

Q ss_pred             CCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHH--------HhcchhhcccCCCC
Q psy14874        334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL--------SRAADLLQSADKNG  405 (1015)
Q Consensus       334 ~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll--------~~~~~~~~~~d~~g  405 (1015)
                      ..|.|+||.|+..+. +++++|+.   .+++......|.||||+|+..|+.+++++|+        +.|++ ++..|..|
T Consensus        92 ~~g~t~L~~Aa~~~~-~~~~~L~~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~-vn~~d~~g  166 (373)
T 2fo1_E           92 PESPIKLHTEAAGSY-AITEPITR---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-VNAMDCDE  166 (373)
T ss_dssp             --CCCHHHHHHHSSS-CCCSCCST---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-TTCCCTTS
T ss_pred             CCCccHHHHHhcCCc-hHHHHhcc---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC-CcCCCCCC
Confidence            356677777776443 55555542   3445444456777777777777776666655        77877 67889999


Q ss_pred             CcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcC---CCCcccccccccCchHHHHHH
Q psy14874        406 KTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKG---EKVDVTTNNLACGHVTVVGLL  482 (1015)
Q Consensus       406 ~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~~~~~~~~~~~~l  482 (1015)
                      .||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++   ++++.                
T Consensus       167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~----------------  230 (373)
T 2fo1_E          167 NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE----------------  230 (373)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC----------------
T ss_pred             CCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh----------------
Confidence            99999999999999999999999999999999999999999999999999999987   45543                


Q ss_pred             HHhhhhhhhhcCCCCCcHHHHHHHcC---CHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCc
Q psy14874        483 LSRAADLLQSADKNGKTCLHIAATHG---HLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGY  559 (1015)
Q Consensus       483 l~~~~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~  559 (1015)
                                .+..|.||||+|+..+   +.+++++|+++|++++..+.         ...+.++..|.||||+|+..|+
T Consensus       231 ----------~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~---------~~~~~~d~~g~t~Lh~A~~~g~  291 (373)
T 2fo1_E          231 ----------LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA---------ARKDSEKYKGRTALHYAAQVSN  291 (373)
T ss_dssp             ----------CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSG---------GGTSSSSCCCCCTHHHHHSSCC
T ss_pred             ----------cCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccc---------cccCcccccCCCHHHHHHHhCC
Confidence                      3789999999999998   89999999999999976432         1235577889999999999999


Q ss_pred             HHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874        560 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  639 (1015)
Q Consensus       560 ~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~  639 (1015)
                      .++|++|++.++.+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+.+++.+++++|++++++
T Consensus       292 ~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~  371 (373)
T 2fo1_E          292 MPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE  371 (373)
T ss_dssp             HHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred             HHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence            99999999998888999999999999999999999999999999999999999999999999999999999999988754

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.4e-36  Score=327.16  Aligned_cols=255  Identities=18%  Similarity=0.184  Sum_probs=209.3

Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhCC-----------CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q psy14874         17 QTSIGWTPLLIACNRGHMELVNTMLNNH-----------ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSR   85 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-----------~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~   85 (1015)
                      -...|.|+||+|+..|+.+.+..++..+           -.++..|.+|+||||+|+..|+.+++++|+++|++++.++.
T Consensus        11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~   90 (285)
T 3d9h_A           11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA   90 (285)
T ss_dssp             -------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECT
T ss_pred             cchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence            3578999999999999988777765542           23566789999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q psy14874         86 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN  165 (1015)
Q Consensus        86 ~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g  165 (1015)
                      .|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+ .|.||||+|+..|
T Consensus        91 ~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g  168 (285)
T 3d9h_A           91 DHVSPLHEACLGGHLSCVKILLK-HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRG  168 (285)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHT
T ss_pred             CCCCHHHHHHHCCcHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcC
Confidence            99999999999999999999995 588999999999999999999999999999999999998654 5999999999999


Q ss_pred             ChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy14874        166 FPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVK  245 (1015)
Q Consensus       166 ~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~  245 (1015)
                      +.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+.+..    .+..|.||||+|+..|+.+++++|++
T Consensus       169 ~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~  243 (285)
T 3d9h_A          169 HVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGADVN----QGKGQDSPLHAVVRTASEELACLLMD  243 (285)
T ss_dssp             CHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT----CCBTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC----CCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            99999999999887 67889999999999999999999999999877644    24578899999999999999999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Q psy14874        246 AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSK  280 (1015)
Q Consensus       246 ~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~  280 (1015)
                      +|++++.+|.+|.|||++|+  ++.+++++|+++.
T Consensus       244 ~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~  276 (285)
T 3d9h_A          244 FGADTQAKNAEGKRPVELVP--PESPLAQLFLERE  276 (285)
T ss_dssp             TTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC
T ss_pred             CCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhh
Confidence            99999999999999999998  4568999999873

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=6e-36  Score=323.96  Aligned_cols=258  Identities=25%  Similarity=0.328  Sum_probs=207.7

Q ss_pred             CCCCCCHHHHHHhcCCHHHHHHHHhhcCC---------CcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCC
Q psy14874        333 SESGMTPLHLAAYSGNENVVRLLLNSAGV---------QVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADK  403 (1015)
Q Consensus       333 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~---------~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~  403 (1015)
                      ...|.|++|+|+..|+.+.+..++.....         ......+..|.||||+|+..|+.+++++|++.+.+ ++..|.
T Consensus        12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~   90 (285)
T 3d9h_A           12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITA   90 (285)
T ss_dssp             ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SCEECT
T ss_pred             chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCC
Confidence            35689999999999998777765543111         11123467799999999999999999999999988 688899


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHH
Q psy14874        404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLL  483 (1015)
Q Consensus       404 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll  483 (1015)
                      .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..                
T Consensus        91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----------------  154 (285)
T 3d9h_A           91 DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE----------------  154 (285)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCS----------------
T ss_pred             CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCC----------------
Confidence            9999999999999999999999999999999999999999999999999999999999987643                


Q ss_pred             HhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHH
Q psy14874        484 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLC  563 (1015)
Q Consensus       484 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v  563 (1015)
                                 ..|.||||+|+..|+.+++++|+++|+++                 +.++..|.||||+|+..|+.++|
T Consensus       155 -----------~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-----------------~~~d~~g~t~L~~A~~~~~~~~v  206 (285)
T 3d9h_A          155 -----------SDLASPIHEAARRGHVECVNSLIAYGGNI-----------------DHKISHLGTPLYLACENQQRACV  206 (285)
T ss_dssp             -----------CTTSCHHHHHHHHTCHHHHHHHHHTTCCT-----------------TCCBTTTBCHHHHHHHTTCHHHH
T ss_pred             -----------CCCCCHHHHHHHcCCHHHHHHHHHCCCCC-----------------CCcCCCCCCHHHHHHHcCcHHHH
Confidence                       55999999999999999999999999988                 55677899999999999999999


Q ss_pred             HHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874        564 RFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  639 (1015)
Q Consensus       564 ~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~  639 (1015)
                      ++|++.+... + .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|+  ++.+++++|+++.+.
T Consensus       207 ~~Ll~~ga~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a  278 (285)
T 3d9h_A          207 KKLLESGADV-N-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGA  278 (285)
T ss_dssp             HHHHHTTCCT-T-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC--
T ss_pred             HHHHHCCCCC-C-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhcc
Confidence            9999886554 4 3788999999999999999999999999999999999999999999  457999999998443

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=3.5e-36  Score=320.15  Aligned_cols=232  Identities=26%  Similarity=0.333  Sum_probs=169.3

Q ss_pred             hhccCCCCCCcHHHHHHhcC-------------CHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy14874         13 ALNKQTSIGWTPLLIACNRG-------------HMELVNTMLNNHARVDV-FDQEGRSALHLAAEHGYLKVCDALLTHKA   78 (1015)
Q Consensus        13 ~~n~~~~~g~t~L~~A~~~g-------------~~~iv~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga   78 (1015)
                      .+|.+|.+|+||||+|+..|             +.+++++|+++|++++. .|..|.||||+|+..|+.+++++|+++|+
T Consensus         2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~   81 (253)
T 1yyh_A            2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA   81 (253)
T ss_dssp             --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence            47899999999999999987             89999999999998864 48899999999999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q psy14874         79 FINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPI  158 (1015)
Q Consensus        79 ~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L  158 (1015)
                      +++.++..|.||||+|+..|+.+++++|++.+..+++..+..|.||||+|+..|+.+++++|++.|++++..|..|.|||
T Consensus        82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L  161 (253)
T 1yyh_A           82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL  161 (253)
T ss_dssp             CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred             CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            99999999999999999999999999999776668899999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHH
Q psy14874        159 HVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHAN  238 (1015)
Q Consensus       159 ~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~  238 (1015)
                      |+|+..|+.+++++|++++.+ ++..+.                                    .|.||||.|+..|+.+
T Consensus       162 ~~A~~~~~~~~v~~Ll~~ga~-~~~~~~------------------------------------~g~tpL~~A~~~~~~~  204 (253)
T 1yyh_A          162 HWAAAVNNVDAAVVLLKNGAN-KDMQNN------------------------------------REETPLFLAAREGSYE  204 (253)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCC-TTCCCT------------------------------------TSCCHHHHHHHHTCHH
T ss_pred             HHHHHcCCHHHHHHHHHcCCC-CCCcCC------------------------------------CCCCHHHHHHHCCCHH
Confidence            999999999999999988766 333333                                    4556777777777888


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Q psy14874        239 VVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA  281 (1015)
Q Consensus       239 iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~  281 (1015)
                      ++++|+++|++++..|..|.||+++|+++|+.+++++|.....
T Consensus       205 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~  247 (253)
T 1yyh_A          205 TAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH  247 (253)
T ss_dssp             HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred             HHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence            8888888888888888888888888888888888888876643

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=2.4e-36  Score=340.38  Aligned_cols=262  Identities=20%  Similarity=0.238  Sum_probs=220.5

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL   93 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~   93 (1015)
                      .+..|.+|+||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.++|++|+++|++++.  ..|.||||+
T Consensus        13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~   90 (364)
T 3ljn_A           13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHL   90 (364)
T ss_dssp             ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHH
T ss_pred             ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHH
Confidence            578899999999999999999999999999999999999999999999999999999999999996664  469999999


Q ss_pred             HHHcCCHHHHHHHHhcc---Cccccc-----------------cccCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCCC
Q psy14874         94 AAMNGYADLCRFLVHDH---AAVIDI-----------------LTLRKQTPLHLAAEAG--QLQVCKLLLDLGASIDATD  151 (1015)
Q Consensus        94 A~~~g~~eiv~~Ll~~~---~~~i~~-----------------~~~~g~t~L~~Aa~~g--~~~ivk~Ll~~gad~n~~d  151 (1015)
                      |+..|+.+++++|++..   +..++.                 .+..|.||||+|+..|  +.+++++|+++|++++..|
T Consensus        91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d  170 (364)
T 3ljn_A           91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD  170 (364)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC
T ss_pred             HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC
Confidence            99999999999999642   444454                 7889999999999999  9999999999999999999


Q ss_pred             CCCCcHHHHHHHcCChHHHHHHhhcCCCC----cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcH
Q psy14874        152 DQGQKPIHVAAQNNFPEVAQIFLRAHPSL----VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATP  227 (1015)
Q Consensus       152 ~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~----~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~  227 (1015)
                      ..|.||||+|+..|+.+++++|++.+++.    ++..+                                    ..|.||
T Consensus       171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~------------------------------------~~g~t~  214 (364)
T 3ljn_A          171 KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYAN------------------------------------KQGNSH  214 (364)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCC------------------------------------TTCCCT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccC------------------------------------CCCCcH
Confidence            99999999999999999999999987762    22222                                    345677


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc------------cccccCCCHHH
Q psy14874        228 LQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNV------------YSKKLGVTALH  295 (1015)
Q Consensus       228 L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~------------~~~~~~~t~l~  295 (1015)
                      ||+|+..|+.+++++|+++|++++..|..|.|||++|+..|+.+++++|++.++...            ..+..++++++
T Consensus       215 L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  294 (364)
T 3ljn_A          215 LHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFV  294 (364)
T ss_dssp             THHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTS
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccch
Confidence            777777777777777778888888888888888888888888888888887765331            24566788999


Q ss_pred             HHHHcCCHHHHHHHHhcC
Q psy14874        296 VAAYFGQADTVRELLSHV  313 (1015)
Q Consensus       296 ~A~~~~~~~~v~~Ll~~~  313 (1015)
                      .|+..++.+.+..|+...
T Consensus       295 ~aa~~~~~~~v~~ll~~~  312 (364)
T 3ljn_A          295 PAAADPSKQEVLQLLQEK  312 (364)
T ss_dssp             CSSCCHHHHHHHHHHHHH
T ss_pred             hhhhccCHHHHHHHHHHH
Confidence            999988888888887653

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=6.9e-35  Score=307.13  Aligned_cols=227  Identities=25%  Similarity=0.360  Sum_probs=203.2

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL   93 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~   93 (1015)
                      +|.+|.+|.||||.||+.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+
T Consensus         4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~   83 (237)
T 3b7b_A            4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHL   83 (237)
T ss_dssp             CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHH
T ss_pred             cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHH
Q psy14874         94 AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF  173 (1015)
Q Consensus        94 A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~L  173 (1015)
                      |+..|+.+++++|++.++..++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|
T Consensus        84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L  163 (237)
T 3b7b_A           84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEIL  163 (237)
T ss_dssp             HHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHH
Confidence            99999999999999776688999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy14874        174 LRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDE  253 (1015)
Q Consensus       174 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~  253 (1015)
                      ++.+.+ ++..+.                                    .|.||||.|++.|+.+++++|+++|++++.+
T Consensus       164 l~~g~~-~~~~~~------------------------------------~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~  206 (237)
T 3b7b_A          164 LAAKCD-LHAVNI------------------------------------HGDSPLHIAARENRYDCVVLFLSRDSDVTLK  206 (237)
T ss_dssp             HTTTCC-TTCCCT------------------------------------TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC
T ss_pred             HHcCCC-CCCcCC------------------------------------CCCCHHHHHHHhCCHhHHHHHHHcCCCCCcc
Confidence            988765 333333                                    3456677777777778888888888888888


Q ss_pred             CCCCCCHHHHHHHcCCHHHHHHHH
Q psy14874        254 NKTGFTAVHLAAQNGHNQVLEEMR  277 (1015)
Q Consensus       254 ~~~~~t~L~~A~~~~~~~iv~~Ll  277 (1015)
                      |..|.||+++|+.+++.+.+..++
T Consensus       207 d~~g~t~l~~A~~~~~~~~~~~l~  230 (237)
T 3b7b_A          207 NKEGETPLQCASLNSQVWSALQMS  230 (237)
T ss_dssp             CTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            888888888888888875554444

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=4.4e-36  Score=338.46  Aligned_cols=283  Identities=21%  Similarity=0.183  Sum_probs=196.0

Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHH
Q psy14874         24 PLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS-RVGRTALHLAAMNGYADL  102 (1015)
Q Consensus        24 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~-~~g~t~L~~A~~~g~~ei  102 (1015)
                      ++.-|...|+++++++++..     ..|..|.||||+|+..|. +++++|+.  .++|..+ ..|.||||+|+..|+.++
T Consensus        69 ~~~~~~~~g~~~~~~~~~~~-----~~~~~g~t~L~~Aa~~~~-~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~  140 (373)
T 2fo1_E           69 YGNGNDFLGDFNHTNLQIPT-----EPEPESPIKLHTEAAGSY-AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEK  140 (373)
T ss_dssp             ------------------------------CCCHHHHHHHSSS-CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSC
T ss_pred             cCCCCCcccccccccccccc-----CCCCCCccHHHHHhcCCc-hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHH
Confidence            33444455555555555443     246677788888887554 67777654  4566666 577888888888888777


Q ss_pred             HHHHHh-------ccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh
Q psy14874        103 CRFLVH-------DHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR  175 (1015)
Q Consensus       103 v~~Ll~-------~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~  175 (1015)
                      +++|+.       ..+.++|..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++
T Consensus       141 v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  220 (373)
T 2fo1_E          141 SEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLN  220 (373)
T ss_dssp             CTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence            776653       4577777777888888888888888888888888888888888888888888888888888888877


Q ss_pred             cCC--CCcccCCCCCchHHHHHHHcC---CHHHHHHHHhcCCccccc-----ccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy14874        176 AHP--SLVTATTKDGNTCAHIAAMQG---SVGVIEELMKFDRSGVIS-----ARNRVTEATPLQLAAEGGHANVVRVLVK  245 (1015)
Q Consensus       176 ~~~--~~~~~~~~~g~t~L~~A~~~g---~~~iv~~Ll~~~~~~~~~-----~~~~~~~~t~L~~A~~~g~~~iv~~Ll~  245 (1015)
                      .+.  ..++..+..|.||||+|+..+   +.+++++|++.+.+....     ...+..|.||||+|+..|+.+++++|++
T Consensus       221 ~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~  300 (373)
T 2fo1_E          221 STKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVG  300 (373)
T ss_dssp             SHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHH
T ss_pred             cCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHH
Confidence            652  235566777888888888777   777888888776554321     1234467788888888888888888887


Q ss_pred             cC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCC
Q psy14874        246 AG-ASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVP  314 (1015)
Q Consensus       246 ~g-a~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~  314 (1015)
                      +| ++++..|..|.||||+|+..|+.+++++|++.|++....+..|.||+++|+..|+.+++++|+++++
T Consensus       301 ~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a  370 (373)
T 2fo1_E          301 EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRP  370 (373)
T ss_dssp             HSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred             hcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence            75 8888888888888888888888888888888888777777888888888888888888888887643

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=1.9e-35  Score=314.40  Aligned_cols=227  Identities=29%  Similarity=0.420  Sum_probs=180.7

Q ss_pred             cCCccHHHHHHhCC-------------CHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCC
Q psy14874        369 ENGYNPLHLACFGG-------------HVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD  435 (1015)
Q Consensus       369 ~~g~tpL~~A~~~g-------------~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~  435 (1015)
                      .+|.||||+|+..|             +.+++++|+++|++..+..|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus         8 ~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~   87 (253)
T 1yyh_A            8 PDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD   87 (253)
T ss_dssp             --------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred             CCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence            34555555555544             89999999999999777779999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHhCCHHHHHHHHhcCC-CCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHH
Q psy14874        436 KGGARSIHTAARYGHVGIINTLLQKGE-KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE  514 (1015)
Q Consensus       436 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~  514 (1015)
                      ..|.||||+|+..|+.+++++|+++|. +++.                          .+..|.||||+|+..|+.++++
T Consensus        88 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--------------------------~~~~g~t~L~~A~~~~~~~~v~  141 (253)
T 1yyh_A           88 NMGRTPLHAAVSADAQGVFQILIRNRATDLDA--------------------------RMHDGTTPLILAARLAVEGMLE  141 (253)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC--------------------------CCTTCCCHHHHHHHHTCSSHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc--------------------------cCCCCCcHHHHHHHcChHHHHH
Confidence            999999999999999999999999986 5553                          3688999999999999999999


Q ss_pred             HHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCH
Q psy14874        515 VLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL  594 (1015)
Q Consensus       515 ~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~  594 (1015)
                      +|+++|+++                 +.++..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.
T Consensus       142 ~Ll~~g~~~-----------------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~  203 (253)
T 1yyh_A          142 DLINSHADV-----------------NAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSY  203 (253)
T ss_dssp             HHHHTTCCT-----------------TCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             HHHHcCCCC-----------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCCH
Confidence            999999998                 556778999999999999999999999875 45688899999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874        595 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  639 (1015)
Q Consensus       595 ~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~  639 (1015)
                      +++++|+++|++++.+|..|+||+++|+++|+.+++++|....+.
T Consensus       204 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~  248 (253)
T 1yyh_A          204 ETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHH  248 (253)
T ss_dssp             HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC----
T ss_pred             HHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhh
Confidence            999999999999999999999999999999999999999876554

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=4.5e-35  Score=309.47  Aligned_cols=230  Identities=27%  Similarity=0.341  Sum_probs=194.7

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHh----CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLN----NHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRT   89 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~----~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t   89 (1015)
                      ++.+|.+|+||||+||+.|+.++|++|++    .|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.|
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t   81 (241)
T 1k1a_A            2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT   81 (241)
T ss_dssp             -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence            57899999999999999999999999997    89999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhccC---ccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcC
Q psy14874         90 ALHLAAMNGYADLCRFLVHDHA---AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD-DQGQKPIHVAAQNN  165 (1015)
Q Consensus        90 ~L~~A~~~g~~eiv~~Ll~~~~---~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d-~~~~t~L~~A~~~g  165 (1015)
                      |||+|+..|+.+++++|++...   .+++..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|
T Consensus        82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~  161 (241)
T 1k1a_A           82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN  161 (241)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcC
Confidence            9999999999999999997543   2678889999999999999999999999999999999988 78999999999999


Q ss_pred             ChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy14874        166 FPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVK  245 (1015)
Q Consensus       166 ~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~  245 (1015)
                      +.+++++|++++.+ ++..+.                                    .|.||||+|+..|+.+++++|++
T Consensus       162 ~~~~v~~Ll~~g~~-~~~~~~------------------------------------~g~t~L~~A~~~~~~~~v~~Ll~  204 (241)
T 1k1a_A          162 SLSMVQLLLQHGAN-VNAQMY------------------------------------SGSSALHSASGRGLLPLVRTLVR  204 (241)
T ss_dssp             CHHHHHHHHHTTCC-TTCBCT------------------------------------TSCBHHHHHHHHTCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCC-CCCcCC------------------------------------CCCCHHHHHHHcCCHHHHHHHHh
Confidence            99999999988765 333333                                    34566666677777777778888


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Q psy14874        246 AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSK  280 (1015)
Q Consensus       246 ~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~  280 (1015)
                      +|++++.+|..|.||+++|+..++.++++.|.+.+
T Consensus       205 ~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~  239 (241)
T 1k1a_A          205 SGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP  239 (241)
T ss_dssp             TTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred             cCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence            88888888888888888888888888888777654

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=1.7e-34  Score=313.06  Aligned_cols=252  Identities=22%  Similarity=0.230  Sum_probs=180.1

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHAR---VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTA   90 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~---~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~   90 (1015)
                      +|.+|.+|+||||+||+.|+.++|++|+++|++   ++..|..|+||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp   81 (282)
T 1oy3_D            2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA   81 (282)
T ss_dssp             CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence            688999999999999999999999999999988   88899999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhccCcc------------ccccccCCCCHHHHHHHcCC-HHHHHHHHHCCCCCCCCCCCCCcH
Q psy14874         91 LHLAAMNGYADLCRFLVHDHAAV------------IDILTLRKQTPLHLAAEAGQ-LQVCKLLLDLGASIDATDDQGQKP  157 (1015)
Q Consensus        91 L~~A~~~g~~eiv~~Ll~~~~~~------------i~~~~~~g~t~L~~Aa~~g~-~~ivk~Ll~~gad~n~~d~~~~t~  157 (1015)
                      ||+|+..|+.+++++|++.....            .+.....+.++++.++..+. ....+.+...+++++..+..|.||
T Consensus        82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~  161 (282)
T 1oy3_D           82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP  161 (282)
T ss_dssp             HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred             HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence            99999999999999999643221            11222345566666665543 334555566778888888888899


Q ss_pred             HHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCH
Q psy14874        158 IHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHA  237 (1015)
Q Consensus       158 L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~  237 (1015)
                      ||+|+..|+.+++++|++++.+.....+..|.||||+|+..|+.+++++|++.+.+..   ..+..|.||||+|+..|+.
T Consensus       162 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~---~~d~~g~tpL~~A~~~~~~  238 (282)
T 1oy3_D          162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT---ARMYGGRTPLGSALLRPNP  238 (282)
T ss_dssp             HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHTSSCH
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc---ccccCCCCHHHHHHHcCCc
Confidence            9999998999999988888877433333458888888888888888888887765532   2344677888888888888


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q psy14874        238 NVVRVLVKAGASCTDENKTGFTAVHLAAQNG  268 (1015)
Q Consensus       238 ~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~  268 (1015)
                      +++++|+++|++++.++..|.||+++|....
T Consensus       239 ~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~  269 (282)
T 1oy3_D          239 ILARLLRAHGAPEPEDGGDKLSPCSSSGSDS  269 (282)
T ss_dssp             HHHHHHHHTTCCCCCCC--------------
T ss_pred             HHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence            8888888888888888888888888776554

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=9.5e-34  Score=297.13  Aligned_cols=225  Identities=28%  Similarity=0.394  Sum_probs=207.5

Q ss_pred             CCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhC
Q psy14874        370 NGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYG  449 (1015)
Q Consensus       370 ~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g  449 (1015)
                      .+.+||+.|+..|+.+.++++++.++...+..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus         5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   84 (231)
T 3aji_A            5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG   84 (231)
T ss_dssp             CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT
T ss_pred             cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcC
Confidence            46789999999999999999999888877888999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhH
Q psy14874        450 HVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKV  529 (1015)
Q Consensus       450 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~  529 (1015)
                      +.+++++|+++|++++..                          +..|.||||.|+..|+.+++++|+++|+++      
T Consensus        85 ~~~~v~~Ll~~g~~~~~~--------------------------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~------  132 (231)
T 3aji_A           85 XDEIVKALLVKGAHVNAV--------------------------NQNGCTPLHYAASKNRHEIAVMLLEGGANP------  132 (231)
T ss_dssp             CHHHHHHHHHTTCCTTCC--------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT------
T ss_pred             HHHHHHHHHHcCCCCCCC--------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------
Confidence            999999999999887754                          688999999999999999999999999988      


Q ss_pred             HHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy14874        530 CDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA  609 (1015)
Q Consensus       530 ~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~  609 (1015)
                                 +.++..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus       133 -----------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~  200 (231)
T 3aji_A          133 -----------DAKDHYDATAMHRAAAKGNLKMVHILLFYK-ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI  200 (231)
T ss_dssp             -----------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred             -----------CCcCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Confidence                       456678999999999999999999999764 45688889999999999999999999999999999999


Q ss_pred             CCCCCCCHHHHHHhcCChHHHHHHHHhCC
Q psy14874        610 TDDQGQKPIHVAAQNNFPEVAQIFLRAHP  638 (1015)
Q Consensus       610 ~d~~g~t~l~~A~~~~~~~~~~~ll~~~~  638 (1015)
                      +|..|.||+++|+..++.+++++|.+++.
T Consensus       201 ~~~~g~t~l~~A~~~~~~~i~~lL~~~~a  229 (231)
T 3aji_A          201 ENKEEKTPLQVAKGGLGLILKRLAEGEEA  229 (231)
T ss_dssp             CCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence            99999999999999999999999987653

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=6.2e-34  Score=300.69  Aligned_cols=230  Identities=24%  Similarity=0.351  Sum_probs=198.9

Q ss_pred             cccCCccHHHHHHhCCCHHHHHHHHH----hcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHH
Q psy14874        367 TQENGYNPLHLACFGGHVTVVGLLLS----RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSI  442 (1015)
Q Consensus       367 ~~~~g~tpL~~A~~~g~~~iv~~Ll~----~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L  442 (1015)
                      .+.+|.||||+|+..|+.+++++|++    .+.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||
T Consensus         5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l   83 (241)
T 1k1a_A            5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA   83 (241)
T ss_dssp             --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC-CCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence            35678889999999999888888887    4444 677888999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q psy14874        443 HTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAE  522 (1015)
Q Consensus       443 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~  522 (1015)
                      |+|+..|+.+++++|++++......                      ++..+..|.||||.|+..|+.+++++|+++|++
T Consensus        84 ~~A~~~~~~~~~~~Ll~~~~~~~~~----------------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~  141 (241)
T 1k1a_A           84 HLACEHRSPTCLRALLDSAAPGTLD----------------------LEARNYDGLTALHVAVNTECQETVQLLLERGAD  141 (241)
T ss_dssp             HHHHHTTCHHHHHHHHHHSCTTSCC----------------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             HHHHHcCCHHHHHHHHHcCCCcccc----------------------ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence            9999999999999999998732211                      223478899999999999999999999999998


Q ss_pred             CcchhhHHHhhhhccccccccC-CCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHH
Q psy14874        523 INATDKVCDALLTHKAFINSKS-RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL  601 (1015)
Q Consensus       523 ~~~~~~~~~~ll~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll  601 (1015)
                      ++.                 .+ ..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|+
T Consensus       142 ~~~-----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  203 (241)
T 1k1a_A          142 IDA-----------------VDIKSGRSPLIHAVENNSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVRTLV  203 (241)
T ss_dssp             TTC-----------------CCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHH
T ss_pred             ccc-----------------ccccCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            843                 44 67999999999999999999999875 456888999999999999999999999999


Q ss_pred             HcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhC
Q psy14874        602 DLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH  637 (1015)
Q Consensus       602 ~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~  637 (1015)
                      ++|++++.+|..|.||+++|+..++.++++.|.+.+
T Consensus       204 ~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~  239 (241)
T 1k1a_A          204 RSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP  239 (241)
T ss_dssp             HTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred             hcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence            999999999999999999999999999999887654

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=3e-33  Score=294.56  Aligned_cols=223  Identities=27%  Similarity=0.475  Sum_probs=201.6

Q ss_pred             ccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHH
Q psy14874        368 QENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAAR  447 (1015)
Q Consensus       368 ~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~  447 (1015)
                      +..|.||||+|+..|+.+++++|+++|.+ ++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus         8 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   86 (237)
T 3b7b_A            8 HQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAK   86 (237)
T ss_dssp             SCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHH
T ss_pred             cCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Confidence            46788999999999999999999999888 57788899999999999999999999999999999999999999999999


Q ss_pred             hCCHHHHHHHHhcC-CCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcch
Q psy14874        448 YGHVGIINTLLQKG-EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT  526 (1015)
Q Consensus       448 ~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~  526 (1015)
                      .|+.+++++|+++| .+++..                          +..|.||||.|+..|+.+++++|+++|+++   
T Consensus        87 ~~~~~~~~~Ll~~~~~~~~~~--------------------------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---  137 (237)
T 3b7b_A           87 KGHYEVVQYLLSNGQMDVNCQ--------------------------DDGGWTPMIWATEYKHVDLVKLLLSKGSDI---  137 (237)
T ss_dssp             TTCHHHHHHHHTTTCCCTTCC--------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---
T ss_pred             cCCHHHHHHHHhCCCCCcccC--------------------------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---
Confidence            99999999999998 565543                          678999999999999999999999999988   


Q ss_pred             hhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy14874        527 DKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS  606 (1015)
Q Consensus       527 ~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~  606 (1015)
                                    +.++..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|+++|++
T Consensus       138 --------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad  202 (237)
T 3b7b_A          138 --------------NIRDNEENICLHWAAFSGCVDIAEILLAAK-CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD  202 (237)
T ss_dssp             --------------TCCCTTSCCHHHHHHHHCCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred             --------------CccCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC
Confidence                          456778999999999999999999999775 45688889999999999999999999999999999


Q ss_pred             CCCCCCCCCCHHHHHHhcCChHHHHHHHH
Q psy14874        607 IDATDDQGQKPIHVAAQNNFPEVAQIFLR  635 (1015)
Q Consensus       607 ~~~~d~~g~t~l~~A~~~~~~~~~~~ll~  635 (1015)
                      ++.+|..|+||+++|+.+++.+.+..+.+
T Consensus       203 ~~~~d~~g~t~l~~A~~~~~~~~~~~l~~  231 (237)
T 3b7b_A          203 VTLKNKEGETPLQCASLNSQVWSALQMSK  231 (237)
T ss_dssp             TTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred             CCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998876655543

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=1.3e-34  Score=326.34  Aligned_cols=262  Identities=21%  Similarity=0.263  Sum_probs=222.0

Q ss_pred             CCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHH
Q psy14874        332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHI  411 (1015)
Q Consensus       332 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~  411 (1015)
                      .+..|.||||+|+..|+.++|++|++. |++++.. +..|.||||+|+..|+.+++++|++++++.   .+..|.||||+
T Consensus        16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~   90 (364)
T 3ljn_A           16 SDDENMEKIHVAARKGQTDEVRRLIET-GVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHL   90 (364)
T ss_dssp             CCHHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHH
Confidence            456788999999999999999999974 8888864 567899999999999999999999998853   34578999999


Q ss_pred             HHHcCCHHHHHHHhhC----CCCccc-----------------CCCCCCCHHHHHHHhC--CHHHHHHHHhcCCCCcccc
Q psy14874        412 AATHGHLQMVEVLLGQ----GAEINA-----------------TDKGGARSIHTAARYG--HVGIINTLLQKGEKVDVTT  468 (1015)
Q Consensus       412 A~~~g~~~iv~~Ll~~----ga~i~~-----------------~~~~g~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~  468 (1015)
                      |+..|+.+++++|+++    |++++.                 .+..|.||||+|+..|  +.+++++|+++|++++.. 
T Consensus        91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~-  169 (364)
T 3ljn_A           91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK-  169 (364)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCC-
T ss_pred             HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCccc-
Confidence            9999999999999998    888877                 8888999999999999  999999999999888754 


Q ss_pred             cccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCC
Q psy14874        469 NNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGR  548 (1015)
Q Consensus       469 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~  548 (1015)
                                               |..|.||||+|+..|+.+++++|+++|++...            .+++..+..|.
T Consensus       170 -------------------------d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------~~~~~~~~~g~  212 (364)
T 3ljn_A          170 -------------------------DKADETPLMRAMEFRNREALDLMMDTVPSKSS------------LRLDYANKQGN  212 (364)
T ss_dssp             -------------------------CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS------------CCTTCCCTTCC
T ss_pred             -------------------------CCCCCCHHHHHHHcCCHHHHHHHHhccccccc------------ccccccCCCCC
Confidence                                     67899999999999999999999999888321            11366778899


Q ss_pred             cHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------CCCCCCC
Q psy14874        549 TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA------------TDDQGQK  616 (1015)
Q Consensus       549 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~------------~d~~g~t  616 (1015)
                      ||||+|+..|+.++|++|++.+ .+++..|..|.||||+|+..|+.+++++|+++|++++.            .+..++|
T Consensus       213 t~L~~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (364)
T 3ljn_A          213 SHLHWAILINWEDVAMRFVEMG-IDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWL  291 (364)
T ss_dssp             CTTHHHHTTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCC
T ss_pred             cHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccc
Confidence            9999999999999999999765 45688888999999999999999999999998876532            5677889


Q ss_pred             HHHHHHhcCChHHHHHHHHhC
Q psy14874        617 PIHVAAQNNFPEVAQIFLRAH  637 (1015)
Q Consensus       617 ~l~~A~~~~~~~~~~~ll~~~  637 (1015)
                      |+++|+..++.+.+..|++.+
T Consensus       292 ~l~~aa~~~~~~~v~~ll~~~  312 (364)
T 3ljn_A          292 DFVPAAADPSKQEVLQLLQEK  312 (364)
T ss_dssp             TTSCSSCCHHHHHHHHHHHHH
T ss_pred             cchhhhhccCHHHHHHHHHHH
Confidence            999999888777777776654

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=2.1e-33  Score=293.87  Aligned_cols=221  Identities=27%  Similarity=0.424  Sum_probs=198.9

Q ss_pred             CccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCC--CCccc-CCCCCCCHHHHHHH
Q psy14874        371 GYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG--AEINA-TDKGGARSIHTAAR  447 (1015)
Q Consensus       371 g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~g--a~i~~-~~~~g~t~L~~A~~  447 (1015)
                      |.||||.|+..|+.+++++|++.+++..+..+..|.||||+|+..|+.+++++|+++|  ++++. .+..|.||||+|+.
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~   81 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS   81 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence            6799999999999999999999999877778999999999999999999999999999  66666 78899999999999


Q ss_pred             hCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchh
Q psy14874        448 YGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD  527 (1015)
Q Consensus       448 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~  527 (1015)
                      .|+.+++++|+++|.+.+.                        +..+..|.||||.|+..|+.+++++|+++|+++    
T Consensus        82 ~~~~~~~~~Ll~~g~~~~~------------------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----  133 (228)
T 2dzn_A           82 VGNLEVVKSLYDRPLKPDL------------------------NKITNQGVTCLHLAVGKKWFEVSQFLIENGASV----  133 (228)
T ss_dssp             HCCHHHHHHHHSSSSCCCT------------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS----
T ss_pred             cCCHHHHHHHHhCCCCccc------------------------ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc----
Confidence            9999999999999843332                        133688999999999999999999999999998    


Q ss_pred             hHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHH-HcCCC
Q psy14874        528 KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL-DLGAS  606 (1015)
Q Consensus       528 ~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll-~~ga~  606 (1015)
                                   +.++..|.||||+|+..|+.+++++|++.+..+++..|..|+||||+|+..|+.+++++|+ +.|++
T Consensus       134 -------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~  200 (228)
T 2dzn_A          134 -------------RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE  200 (228)
T ss_dssp             -------------CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC
T ss_pred             -------------cccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence                         5567789999999999999999999999887888999999999999999999999999999 89999


Q ss_pred             CCCCCCCCCCHHHHHHhcCChHHHHHHHH
Q psy14874        607 IDATDDQGQKPIHVAAQNNFPEVAQIFLR  635 (1015)
Q Consensus       607 ~~~~d~~g~t~l~~A~~~~~~~~~~~ll~  635 (1015)
                      ++.+|..|+||+++|+..   +++++|++
T Consensus       201 ~~~~~~~g~t~l~~A~~~---~~~~~l~~  226 (228)
T 2dzn_A          201 YDLVDNKGAKAEDVALNE---QVKKFFLN  226 (228)
T ss_dssp             SCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred             CCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence            999999999999999754   56666654

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.4e-34  Score=306.14  Aligned_cols=227  Identities=30%  Similarity=0.333  Sum_probs=166.4

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCC--------CCCCCCCCCcHHHHHHHcCCH-HHHHHHHhCCCCCCCCC
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHAR--------VDVFDQEGRSALHLAAEHGYL-KVCDALLTHKAFINSKS   84 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~--------~~~~d~~g~t~L~~A~~~g~~-~iv~~Ll~~ga~in~~~   84 (1015)
                      -.++|..+.+||+.||+.|+.++|++|++.|++        ++..+..|.|||+.|+..++. .++++|++.|+++|.+|
T Consensus         4 e~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d   83 (269)
T 4b93_B            4 ETKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTS   83 (269)
T ss_dssp             ---CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCC
T ss_pred             ccccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcC
Confidence            356788899999999999999999999999875        456678899999999988775 58999999999999999


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Q psy14874         85 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQN  164 (1015)
Q Consensus        85 ~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~  164 (1015)
                      .+|.||||+|+..|+.++|++|++ .+++++..+..|.||++.|+..++.+++++|++.|+++|.+|..|.||||+|+..
T Consensus        84 ~~G~TpLh~A~~~g~~~~v~~Ll~-~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~  162 (269)
T 4b93_B           84 QDGSSPLHVAALHGRADLIPLLLK-HGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSG  162 (269)
T ss_dssp             TTSCCHHHHHHHTTCTTHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred             CCCCCHHHHHHHcCcHHHHHHHHh-cCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence            999999999999999999999994 6788899999999999999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14874        165 NFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLV  244 (1015)
Q Consensus       165 g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll  244 (1015)
                      |+.+++++|++.+.+ ++..+.                                    .|.||||+|+..|+.+++++|+
T Consensus       163 g~~~~v~~Ll~~gad-vn~~~~------------------------------------~g~t~Lh~A~~~g~~~~v~~Ll  205 (269)
T 4b93_B          163 GHHELVALLLQHGAS-INASNN------------------------------------KGNTALHEAVIEKHVFVVELLL  205 (269)
T ss_dssp             TCGGGHHHHHHTTCC-TTCBCT------------------------------------TSCBHHHHHHHTTCHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCC-CCcccc------------------------------------CCCcHHHHHHHcCCHHHHHHHH
Confidence            999999999998776 344443                                    3456666677777778888888


Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHh
Q psy14874        245 KAGASCTDENKTGFTAVHLAAQNGH-NQVLEEMRS  278 (1015)
Q Consensus       245 ~~ga~~~~~~~~~~t~L~~A~~~~~-~~iv~~Ll~  278 (1015)
                      ++|++++.+|..|.|||++|+++++ .++++.+.+
T Consensus       206 ~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~  240 (269)
T 4b93_B          206 LHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPS  240 (269)
T ss_dssp             HTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC---
T ss_pred             HCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHH
Confidence            8888888888888888888877664 233333333

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=3.2e-33  Score=293.13  Aligned_cols=225  Identities=25%  Similarity=0.317  Sum_probs=190.6

Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHhCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874         18 TSIGWTPLLIACNRGHMELVNTMLNNHA-RVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM   96 (1015)
Q Consensus        18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~   96 (1015)
                      +..+.||||.|++.|+.+.+++|++.+. .++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus         3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   82 (231)
T 3aji_A            3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAAS   82 (231)
T ss_dssp             CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred             CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHH
Confidence            4568899999999999999999999765 467779999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874         97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      .|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.
T Consensus        83 ~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  161 (231)
T 3aji_A           83 AGXDEIVKALLV-KGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY  161 (231)
T ss_dssp             HTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred             cCHHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc
Confidence            999999999995 5788899999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q psy14874        177 HPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKT  256 (1015)
Q Consensus       177 ~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~  256 (1015)
                      +.+ ++..+..|                                    .||||+|+..|+.+++++|+++|++++.+|..
T Consensus       162 g~~-~~~~~~~g------------------------------------~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~  204 (231)
T 3aji_A          162 KAS-TNIQDTEG------------------------------------NTPLHLACDEERVEEAKFLVTQGASIYIENKE  204 (231)
T ss_dssp             TCC-SCCCCTTS------------------------------------CCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred             CCC-ccccCCCC------------------------------------CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Confidence            765 34444444                                    45555555666666666666677777767777


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhCC
Q psy14874        257 GFTAVHLAAQNGHNQVLEEMRSSK  280 (1015)
Q Consensus       257 ~~t~L~~A~~~~~~~iv~~Ll~~~  280 (1015)
                      |.||+++|+..++.+++++|.+.+
T Consensus       205 g~t~l~~A~~~~~~~i~~lL~~~~  228 (231)
T 3aji_A          205 EKTPLQVAKGGLGLILKRLAEGEE  228 (231)
T ss_dssp             SCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHhhHHHHHHHHHcccc
Confidence            777777777666677777666654

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=8.1e-33  Score=291.80  Aligned_cols=232  Identities=21%  Similarity=0.294  Sum_probs=195.6

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHH
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS-RVGRTALH   92 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~-~~g~t~L~   92 (1015)
                      ++..|..|.||||.|++.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||
T Consensus         2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~   81 (240)
T 3eu9_A            2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH   81 (240)
T ss_dssp             CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred             ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence            57789999999999999999999999999999999999999999999999999999999999999987654 44999999


Q ss_pred             HHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC-hHHHH
Q psy14874         93 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNF-PEVAQ  171 (1015)
Q Consensus        93 ~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~-~~iv~  171 (1015)
                      +|+..|+.+++++|++ .+.+++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++ .++++
T Consensus        82 ~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~  160 (240)
T 3eu9_A           82 WATRQGHLSMVVQLMK-YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTR  160 (240)
T ss_dssp             HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHH
T ss_pred             HHHHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHH
Confidence            9999999999999994 578889899999999999999999999999999999999999999999999996666 78888


Q ss_pred             HHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy14874        172 IFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCT  251 (1015)
Q Consensus       172 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~  251 (1015)
                      +|++.+.+. +..+.                                   ..|.||||.|+..|+.+++++|+++|++++
T Consensus       161 ~L~~~~~~~-~~~~~-----------------------------------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~  204 (240)
T 3eu9_A          161 LLLTFNVSV-NLGDK-----------------------------------YHKNTALHWAVLAGNTTVISLLLEAGANVD  204 (240)
T ss_dssp             HHHHTTCCT-TCCCT-----------------------------------TTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred             HHHhcCCCc-chhhc-----------------------------------cCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            888877663 22222                                   134466666666677777777777777777


Q ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc
Q psy14874        252 DENKTGFTAVHLAAQNGHNQVLEEMRSSKAL  282 (1015)
Q Consensus       252 ~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~  282 (1015)
                      ..+..|.||+++|++.++.+++++|++.++.
T Consensus       205 ~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~  235 (240)
T 3eu9_A          205 AQNIKGESALDLAKQRKNVWMINHLQEARQA  235 (240)
T ss_dssp             CBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred             CcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence            7777777777777777777777777776653

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=7.8e-34  Score=307.19  Aligned_cols=224  Identities=17%  Similarity=0.123  Sum_probs=137.7

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL   93 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~   93 (1015)
                      +|.+|..|+||||+|++.|+.++|++|+++|++++..  +|+||||+|+..|+.+++++|+++|++++.++..|.||||+
T Consensus        24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~  101 (285)
T 3kea_A           24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYY  101 (285)
T ss_dssp             TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHH
Confidence            3666666666666666666666666666666666654  36666666666666666666666666666666666666666


Q ss_pred             HHHcCCHHHHHHHHhccCccccccccCC-CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHH
Q psy14874         94 AAMNGYADLCRFLVHDHAAVIDILTLRK-QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI  172 (1015)
Q Consensus        94 A~~~g~~eiv~~Ll~~~~~~i~~~~~~g-~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~  172 (1015)
                      |+..|+.+++++|++ .+++++..+..| .||||+|+..|+.+++++|+++|++.... ..|.||||+|+..|+.+++++
T Consensus       102 A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~  179 (285)
T 3kea_A          102 AVDSGNMQTVKLFVK-KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMIL  179 (285)
T ss_dssp             HHHTTCHHHHHHHHH-HCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHH
T ss_pred             HHHcCCHHHHHHHHh-cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHH
Confidence            666666666666664 355666666666 56666666666666666666666655222 156666666666666666666


Q ss_pred             HhhcCCCCcccCCCCCchH-HHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy14874        173 FLRAHPSLVTATTKDGNTC-AHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCT  251 (1015)
Q Consensus       173 Ll~~~~~~~~~~~~~g~t~-L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~  251 (1015)
                      |++++.+ ++..+..|.|| ||+|+..|+.+++++|++++.+.....          +.|+..|+.+++++|+++|++++
T Consensus       180 Ll~~gad-~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~----------~~a~~~~~~~iv~~Ll~~g~~~~  248 (285)
T 3kea_A          180 LLDYMTS-TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN----------LENVLLDDAEIAKMIIEKHVEYK  248 (285)
T ss_dssp             HHHHHHH-TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT----------GGGGTTTCHHHHHHHHHHHHHHT
T ss_pred             HHHcCCC-CCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC----------hhhhhcCCHHHHHHHHHcCCCCC
Confidence            6666554 44555556665 666666666666666665544432211          13344556666666666655544


Q ss_pred             C
Q psy14874        252 D  252 (1015)
Q Consensus       252 ~  252 (1015)
                      .
T Consensus       249 ~  249 (285)
T 3kea_A          249 S  249 (285)
T ss_dssp             T
T ss_pred             C
Confidence            3

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.3e-34  Score=304.68  Aligned_cols=215  Identities=26%  Similarity=0.334  Sum_probs=165.9

Q ss_pred             ccCCccHHHHHHhCCCHHHHHHHHHhcchh-------hcccCCCCCcHHHHHHHcCCH-HHHHHHhhCCCCcccCCCCCC
Q psy14874        368 QENGYNPLHLACFGGHVTVVGLLLSRAADL-------LQSADKNGKTCLHIAATHGHL-QMVEVLLGQGAEINATDKGGA  439 (1015)
Q Consensus       368 ~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~-------~~~~d~~g~t~L~~A~~~g~~-~iv~~Ll~~ga~i~~~~~~g~  439 (1015)
                      +..+.+||+.|+..|+.++|++|++.+++.       .+..+..|.|||+.|+..++. .+++.|+++|+++|.+|.+|.
T Consensus         8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~   87 (269)
T 4b93_B            8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGS   87 (269)
T ss_dssp             CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSC
T ss_pred             CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCC
Confidence            344567888888888888888888776643       345677889999999988775 488999999999999999999


Q ss_pred             CHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhc
Q psy14874        440 RSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ  519 (1015)
Q Consensus       440 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  519 (1015)
                      ||||+|+..|+.+++++|++.|++++..                          +..|.||++.|+..++.+++++|+++
T Consensus        88 TpLh~A~~~g~~~~v~~Ll~~~a~~~~~--------------------------~~~g~t~l~~a~~~~~~~~~~~Ll~~  141 (269)
T 4b93_B           88 SPLHVAALHGRADLIPLLLKHGANAGAR--------------------------NADQAVPLHLACQQGHFQVVKCLLDS  141 (269)
T ss_dssp             CHHHHHHHTTCTTHHHHHHHTTCCTTCC--------------------------CTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred             CHHHHHHHcCcHHHHHHHHhcCCCcCcc--------------------------CCCCCCccccccccChHHHHHHHHHC
Confidence            9999999999999999999999988754                          68899999999999999999999999


Q ss_pred             CCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHH
Q psy14874        520 GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL  599 (1015)
Q Consensus       520 ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~  599 (1015)
                      |+++                 +.++..|+||||+|+..|+.++|++|++.+ .+++..+..|.||||+|+..|+.++|++
T Consensus       142 g~~~-----------------n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~  203 (269)
T 4b93_B          142 NAKP-----------------NKKDLSGNTPLIYACSGGHHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVEL  203 (269)
T ss_dssp             TCCS-----------------CCCCTTCCCHHHHHHHTTCGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred             CCCC-----------------CCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHH
Confidence            9998                 556788999999999999999999999765 4568899999999999999999999999


Q ss_pred             HHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy14874        600 LLDLGASIDATDDQGQKPIHVAAQNNF  626 (1015)
Q Consensus       600 Ll~~ga~~~~~d~~g~t~l~~A~~~~~  626 (1015)
                      |+++|+|++.+|..|+||||+|+++++
T Consensus       204 Ll~~Gad~~~~d~~G~TpL~~A~~~~~  230 (269)
T 4b93_B          204 LLLHGASVQVLNKRQRTAVDCAEQNSK  230 (269)
T ss_dssp             HHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred             HHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence            999999999999999999999987764

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=1.6e-32  Score=287.20  Aligned_cols=219  Identities=26%  Similarity=0.317  Sum_probs=185.3

Q ss_pred             CCcHHHHHHhcCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCC--CCCCC-CCCCCCcHHHHHHH
Q psy14874         21 GWTPLLIACNRGHMELVNTMLNNHARVDV-FDQEGRSALHLAAEHGYLKVCDALLTHK--AFINS-KSRVGRTALHLAAM   96 (1015)
Q Consensus        21 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~iv~~Ll~~g--a~in~-~~~~g~t~L~~A~~   96 (1015)
                      |.||||.||+.|+.++|++|+++|.+... .|..|.||||+|+..|+.+++++|+++|  .+++. .+..|.||||+|+.
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~   81 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS   81 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence            78999999999999999999999987654 7999999999999999999999999999  55666 78899999999999


Q ss_pred             cCCHHHHHHHHhcc-CccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh
Q psy14874         97 NGYADLCRFLVHDH-AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR  175 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~-~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~  175 (1015)
                      .|+.+++++|++.+ +.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus        82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  161 (228)
T 2dzn_A           82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG  161 (228)
T ss_dssp             HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            99999999999542 27888899999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCCC
Q psy14874        176 AHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLV-KAGASCTDEN  254 (1015)
Q Consensus       176 ~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll-~~ga~~~~~~  254 (1015)
                      .++..++..+..|                                    .||||+|+..|+.+++++|+ ++|++++..|
T Consensus       162 ~g~~~~~~~d~~g------------------------------------~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~  205 (228)
T 2dzn_A          162 LGKSAVNWQDKQG------------------------------------WTPLFHALAEGHGDAAVLLVEKYGAEYDLVD  205 (228)
T ss_dssp             TTCCCSCCCCTTS------------------------------------CCHHHHHHHTTCHHHHHHHHHHHCCCSCCBC
T ss_pred             cCcccccCcCCCC------------------------------------CCHHHHHHHcCCHHHHHHHHHhcCCCCCccC
Confidence            8854445445444                                    45666666666777777777 7788888888


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHh
Q psy14874        255 KTGFTAVHLAAQNGHNQVLEEMRS  278 (1015)
Q Consensus       255 ~~~~t~L~~A~~~~~~~iv~~Ll~  278 (1015)
                      ..|.||+++|+..   +++++|++
T Consensus       206 ~~g~t~l~~A~~~---~~~~~l~~  226 (228)
T 2dzn_A          206 NKGAKAEDVALNE---QVKKFFLN  226 (228)
T ss_dssp             TTSCBGGGGCSST---THHHHHHT
T ss_pred             CCCCcHHHHHHHH---HHHHHHHh
Confidence            8888888888654   44455543

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=1e-32  Score=298.96  Aligned_cols=253  Identities=25%  Similarity=0.211  Sum_probs=194.5

Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCC
Q psy14874         47 VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAF---INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQT  123 (1015)
Q Consensus        47 ~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~---in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t  123 (1015)
                      ++.+|.+|+||||+|+..|+.++|++|+++|++   ++.++..|.||||+|+..|+.+++++|++ .+++++..+..|.|
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t   80 (282)
T 1oy3_D            2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA-AGAGVLVAERGGHT   80 (282)
T ss_dssp             CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCTTSCC
T ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCC
Confidence            356899999999999999999999999999998   88999999999999999999999999995 68899999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCC-------------CCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCch
Q psy14874        124 PLHLAAEAGQLQVCKLLLDLGASIDAT-------------DDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNT  190 (1015)
Q Consensus       124 ~L~~Aa~~g~~~ivk~Ll~~gad~n~~-------------d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t  190 (1015)
                      |||+|+..|+.+++++|+++|++.+..             ...+.++++.++..+.......++......++..+..|.|
T Consensus        81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t  160 (282)
T 1oy3_D           81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT  160 (282)
T ss_dssp             HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred             HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence            999999999999999999999875432             2234566666666555544444443333346778899999


Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Q psy14874        191 CAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHN  270 (1015)
Q Consensus       191 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~  270 (1015)
                      |||+|+..|+.+++++|++.+.+..  ......|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.
T Consensus       161 ~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~  238 (282)
T 1oy3_D          161 PLHVAVIHKDAEMVRLLRDAGADLN--KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP  238 (282)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHTCCTT--CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCc
Confidence            9999999999999999999876643  22334589999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCccccccccCCCHHHHHHHcCC
Q psy14874        271 QVLEEMRSSKALNVYSKKLGVTALHVAAYFGQ  302 (1015)
Q Consensus       271 ~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~  302 (1015)
                      +++++|+++|++....+..|.||++.|....+
T Consensus       239 ~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~  270 (282)
T 1oy3_D          239 ILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD  270 (282)
T ss_dssp             HHHHHHHHTTCCCCCCC---------------
T ss_pred             HHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence            99999999999999999999999999877653

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=2.5e-32  Score=284.54  Aligned_cols=215  Identities=28%  Similarity=0.389  Sum_probs=186.5

Q ss_pred             CCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhc
Q psy14874        381 GGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQK  460 (1015)
Q Consensus       381 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  460 (1015)
                      +|+.+++++|++++++.....|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++
T Consensus         1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~   80 (223)
T 2f8y_A            1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN   80 (223)
T ss_dssp             ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred             CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            36677888888888886666688899999999999999999999999999999999999999999999999999999998


Q ss_pred             CC-CCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhcccc
Q psy14874        461 GE-KVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAF  539 (1015)
Q Consensus       461 g~-~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~  539 (1015)
                      +. +++.                          .+..|.||||.|+..|+.+++++|+++|+++                
T Consensus        81 ~~~~~~~--------------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----------------  118 (223)
T 2f8y_A           81 RATDLDA--------------------------RMHDGTTPLILAARLAVEGMLEDLINSHADV----------------  118 (223)
T ss_dssp             TTSCTTC--------------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT----------------
T ss_pred             CCCCccc--------------------------CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC----------------
Confidence            76 4443                          3678899999999999999999999999887                


Q ss_pred             ccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Q psy14874        540 INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIH  619 (1015)
Q Consensus       540 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~  619 (1015)
                       +.++..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||++
T Consensus       119 -~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~  196 (223)
T 2f8y_A          119 -NAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD  196 (223)
T ss_dssp             -TCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred             -cCcCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHH
Confidence             446678999999999999999999999774 456888889999999999999999999999999999999999999999


Q ss_pred             HHHhcCChHHHHHHHHhCCc
Q psy14874        620 VAAQNNFPEVAQIFLRAHPS  639 (1015)
Q Consensus       620 ~A~~~~~~~~~~~ll~~~~~  639 (1015)
                      +|+.+++.+++++|++++..
T Consensus       197 ~A~~~~~~~i~~~L~~~g~~  216 (223)
T 2f8y_A          197 IAQERMHHDIVRLLDEYNLV  216 (223)
T ss_dssp             HHHHTTCHHHHHHHHHTTCS
T ss_pred             HHHHhcchHHHHHHHHcCCC
Confidence            99999999999999987654

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=5.5e-32  Score=281.99  Aligned_cols=214  Identities=24%  Similarity=0.293  Sum_probs=173.7

Q ss_pred             cCCHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q psy14874         31 RGHMELVNTMLNNHARVDVF-DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHD  109 (1015)
Q Consensus        31 ~g~~~iv~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~  109 (1015)
                      .|+.+++++|+++|++++.. |.+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.
T Consensus         1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~   80 (223)
T 2f8y_A            1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN   80 (223)
T ss_dssp             ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred             CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            37888999999999998765 88999999999999999999999999999999999999999999999999999999987


Q ss_pred             cCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCc
Q psy14874        110 HAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGN  189 (1015)
Q Consensus       110 ~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~  189 (1015)
                      .+..++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++.+ ++..+..|.
T Consensus        81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~  159 (223)
T 2f8y_A           81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREE  159 (223)
T ss_dssp             TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCC
T ss_pred             CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCc
Confidence            7668889999999999999999999999999999999999999999999999999999999999998765 344444444


Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Q psy14874        190 TCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGH  269 (1015)
Q Consensus       190 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~  269 (1015)
                                                          ||||.|++.|+.+++++|+++|++++..+..|.||+++|+.+++
T Consensus       160 ------------------------------------t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~  203 (223)
T 2f8y_A          160 ------------------------------------TPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH  203 (223)
T ss_dssp             ------------------------------------CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             ------------------------------------CHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence                                                45555555555556666666666666666666666666666666


Q ss_pred             HHHHHHHHhCCC
Q psy14874        270 NQVLEEMRSSKA  281 (1015)
Q Consensus       270 ~~iv~~Ll~~~~  281 (1015)
                      .+++++|++++.
T Consensus       204 ~~i~~~L~~~g~  215 (223)
T 2f8y_A          204 HDIVRLLDEYNL  215 (223)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             hHHHHHHHHcCC
Confidence            666666666554

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=1.3e-32  Score=297.64  Aligned_cols=238  Identities=18%  Similarity=0.169  Sum_probs=205.7

Q ss_pred             hcCCH-HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14874         30 NRGHM-ELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH  108 (1015)
Q Consensus        30 ~~g~~-~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~  108 (1015)
                      +..+. +++++|.+.  +++..|..|.||||+|+..|+.+++++|+++|++++..+  |.||||+|+..|+.+++++|++
T Consensus         8 ~~~~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~   83 (285)
T 3kea_A            8 NTWKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLF   83 (285)
T ss_dssp             GGCCHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHH
T ss_pred             HhcCHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHH
Confidence            34444 455555554  578899999999999999999999999999999999884  8999999999999999999995


Q ss_pred             ccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-CcHHHHHHHcCChHHHHHHhhcCCCCcccCCCC
Q psy14874        109 DHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG-QKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKD  187 (1015)
Q Consensus       109 ~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~-~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~  187 (1015)
                       .+++++..+..|+||||+|+..|+.+++++|+++|++++..+..| .||||+|+..|+.+++++|++++++...  ...
T Consensus        84 -~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~  160 (285)
T 3kea_A           84 -SGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAI  160 (285)
T ss_dssp             -TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CST
T ss_pred             -CCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccC
Confidence             688899999999999999999999999999999999999999999 7999999999999999999999887422  228


Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Q psy14874        188 GNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATP-LQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQ  266 (1015)
Q Consensus       188 g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~-L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~  266 (1015)
                      |.||||+|+..|+.+++++|++++.+.   ...+..|.|| ||+|+..|+.+++++|+++|++++..+.       .|+.
T Consensus       161 g~t~L~~A~~~g~~~~v~~Ll~~gad~---n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~  230 (285)
T 3kea_A          161 LLSCIHITIKNGHVDMMILLLDYMTST---NTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVL  230 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHT---CTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGT
T ss_pred             CccHHHHHHHcChHHHHHHHHHcCCCC---CcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhh
Confidence            899999999999999999999876543   3344467787 9999999999999999999999988873       5677


Q ss_pred             cCCHHHHHHHHhCCCccc
Q psy14874        267 NGHNQVLEEMRSSKALNV  284 (1015)
Q Consensus       267 ~~~~~iv~~Ll~~~~~~~  284 (1015)
                      .|+.+++++|+++|.+..
T Consensus       231 ~~~~~iv~~Ll~~g~~~~  248 (285)
T 3kea_A          231 LDDAEIAKMIIEKHVEYK  248 (285)
T ss_dssp             TTCHHHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHcCCCCC
Confidence            889999999999886544

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=1.8e-31  Score=281.40  Aligned_cols=226  Identities=26%  Similarity=0.385  Sum_probs=157.6

Q ss_pred             cCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCC-CCCCHHHHHHH
Q psy14874        369 ENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK-GGARSIHTAAR  447 (1015)
Q Consensus       369 ~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~-~g~t~L~~A~~  447 (1015)
                      ..+.+||+.|+..|+.+++++|++.|.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||.|+.
T Consensus         7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~   85 (240)
T 3eu9_A            7 DYSTWDIVKATQYGIYERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR   85 (240)
T ss_dssp             CGGGCCHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred             cccchHHHHHHHcCChHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence            3456667777777777777777766665 455666677777777777777777777777776665443 36777777777


Q ss_pred             hCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchh
Q psy14874        448 YGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD  527 (1015)
Q Consensus       448 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~  527 (1015)
                      .|+.+++++|+++|++++..                          +..|.||||.|+..|+.+++++|+++|+++    
T Consensus        86 ~~~~~~v~~Ll~~g~~~~~~--------------------------~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~----  135 (240)
T 3eu9_A           86 QGHLSMVVQLMKYGADPSLI--------------------------DGEGCSCIHLAAQFGHTSIVAYLIAKGQDV----  135 (240)
T ss_dssp             HTCHHHHHHHHHTTCCTTCC--------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----
T ss_pred             cCCHHHHHHHHHcCCCCccc--------------------------CCCCCCHHHHHHHcCHHHHHHHHHhcCCCc----
Confidence            77777777777776665533                          466677777777777777777777777666    


Q ss_pred             hHHHhhhhccccccccCCCCCcHHHHHHHcCc-HHHHHHHHhcCCcccccccc-CCCCHHHHHHHcCCHHHHHHHHHcCC
Q psy14874        528 KVCDALLTHKAFINSKSRVGRTALHLAAMNGY-ADLCRFLVHDHAAVIDILTL-RKQTPLHLAAEAGQLQVCKLLLDLGA  605 (1015)
Q Consensus       528 ~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~-~g~T~L~~A~~~~~~~iv~~Ll~~ga  605 (1015)
                                   +.++..|.||||+|+..++ .+++++|++.+.. ++..+. .|.||||+|+..|+.+++++|+++|+
T Consensus       136 -------------~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  201 (240)
T 3eu9_A          136 -------------DMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS-VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGA  201 (240)
T ss_dssp             -------------TCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC-TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred             -------------cccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC-cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence                         3455567777777775554 5666666655443 344444 77888888888888888888888888


Q ss_pred             CCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874        606 SIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  639 (1015)
Q Consensus       606 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~  639 (1015)
                      +++.+|..|.||+++|++.++.+++++|++.+..
T Consensus       202 ~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~  235 (240)
T 3eu9_A          202 NVDAQNIKGESALDLAKQRKNVWMINHLQEARQA  235 (240)
T ss_dssp             CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred             CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence            8888888888888888888888888888876543

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.97  E-value=4e-32  Score=297.05  Aligned_cols=274  Identities=22%  Similarity=0.284  Sum_probs=214.1

Q ss_pred             HHHhcCCHHHHHHHHhCCCCCCC---------CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy14874         27 IACNRGHMELVNTMLNNHARVDV---------FDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN   97 (1015)
Q Consensus        27 ~A~~~g~~~iv~~Ll~~g~~~~~---------~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~   97 (1015)
                      .+++.|+.+.++.++..+..+..         .+.+|.||||.|+..|+.+++++|+++|+++|..+..|.||||+|+..
T Consensus         4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   83 (299)
T 1s70_B            4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACID   83 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence            46777777878777776544332         233567899999999999999999999999998888999999999999


Q ss_pred             CCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcC
Q psy14874         98 GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH  177 (1015)
Q Consensus        98 g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~  177 (1015)
                      |+.+++++|++ .+++++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.++++.++...
T Consensus        84 g~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~  162 (299)
T 1s70_B           84 DNVDMVKFLVE-NGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ  162 (299)
T ss_dssp             TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhc
Confidence            99999999995 67888888889999999999999999999999999999999999999999999999999998888755


Q ss_pred             CCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q psy14874        178 PSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTG  257 (1015)
Q Consensus       178 ~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~  257 (1015)
                      .......+..+.+++.        ..+..++..+..  .....+..|.||||.|+..|+.+++++|+++|++++..|..|
T Consensus       163 ~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g  232 (299)
T 1s70_B          163 GVDIEAARKEEERIML--------RDARQWLNSGHI--NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG  232 (299)
T ss_dssp             TCCHHHHHHHHHHHHH--------HHHHHHHHHTCC--CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTC
T ss_pred             CCCchhhhhhhhhHHH--------HHHHHHHhccCc--chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCC
Confidence            4433322222222222        223334443322  122334568899999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhc
Q psy14874        258 FTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSH  312 (1015)
Q Consensus       258 ~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~  312 (1015)
                      .||||+|+..|+.+++++|++.|++....+..|.||+++|+. +..+.++.+++.
T Consensus       233 ~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~-~~~~~l~~l~~~  286 (299)
T 1s70_B          233 WTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE-DILGYLEELQKK  286 (299)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS-GGGHHHHHHHHH
T ss_pred             CcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-HHHHHHHHHHHH
Confidence            999999999999999999999998888888889999999865 455666666654

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.97  E-value=3.4e-32  Score=297.55  Aligned_cols=249  Identities=26%  Similarity=0.325  Sum_probs=213.5

Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy14874         18 TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN   97 (1015)
Q Consensus        18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~   97 (1015)
                      +..|.||||.||..|+.++|++|+++|+++|..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus        37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~  116 (299)
T 1s70_B           37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC  116 (299)
T ss_dssp             EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             ccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence            44678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874         98 GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus        98 g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~-~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      |+.+++++|++ .+.+++..+..|.||||+|+..|+.++++.++. .|++++..+..+.++++        ..+..++..
T Consensus       117 g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~  187 (299)
T 1s70_B          117 GYLDIAEYLIS-QGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML--------RDARQWLNS  187 (299)
T ss_dssp             TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------HHHHHHHHH
T ss_pred             CCHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHH--------HHHHHHHhc
Confidence            99999999995 588899999999999999999999999998875 45655443332222322        334556666


Q ss_pred             CCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q psy14874        177 HPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKT  256 (1015)
Q Consensus       177 ~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~  256 (1015)
                      +.......+..|.||||+|+..|+.+++++|++.+.+..   ..+..|.||||+|+..|+.+++++|+++|++++..|..
T Consensus       188 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~---~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~  264 (299)
T 1s70_B          188 GHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN---IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKV  264 (299)
T ss_dssp             TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred             cCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC---CcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCC
Confidence            666666778899999999999999999999999876543   33457899999999999999999999999999999999


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhC
Q psy14874        257 GFTAVHLAAQNGHNQVLEEMRSS  279 (1015)
Q Consensus       257 ~~t~L~~A~~~~~~~iv~~Ll~~  279 (1015)
                      |.||+++|++.. .+.++.+++.
T Consensus       265 g~t~l~~A~~~~-~~~l~~l~~~  286 (299)
T 1s70_B          265 GQTAFDVADEDI-LGYLEELQKK  286 (299)
T ss_dssp             SCCTTTSCCSGG-GHHHHHHHHH
T ss_pred             CCCHHHHHHHHH-HHHHHHHHHH
Confidence            999999997654 4444555443

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.97  E-value=3.6e-31  Score=277.67  Aligned_cols=193  Identities=25%  Similarity=0.353  Sum_probs=172.8

Q ss_pred             CCCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----CCCCCCCCcHHHH
Q psy14874         20 IGWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI-----NSKSRVGRTALHL   93 (1015)
Q Consensus        20 ~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i-----n~~~~~g~t~L~~   93 (1015)
                      .|+||||.|++.|+.++|++|+++ |++++..|..|+||||+|+..|+.+++++|+++|+++     +..+..|.||||+
T Consensus         2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~   81 (232)
T 2rfa_A            2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI   81 (232)
T ss_dssp             CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence            589999999999999999999998 9999999999999999999999999999999999987     6778899999999


Q ss_pred             HHHcCCHHHHHHHHhccCcccccccc-------------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy14874         94 AAMNGYADLCRFLVHDHAAVIDILTL-------------RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHV  160 (1015)
Q Consensus        94 A~~~g~~eiv~~Ll~~~~~~i~~~~~-------------~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~  160 (1015)
                      |+..|+.+++++|++ .+.+++..+.             .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus        82 A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~  160 (232)
T 2rfa_A           82 AVINQNVNLVRALLA-RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHI  160 (232)
T ss_dssp             HHHTTCHHHHHHHHH-TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             HHHcCCHHHHHHHHh-CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            999999999999995 5777777665             79999999999999999999999999999999999999999


Q ss_pred             HHHcCChHHH----HHHhhcCCCCc-----ccCCCCCchHHHHHHHcCCHHHHHHHHhcCCc
Q psy14874        161 AAQNNFPEVA----QIFLRAHPSLV-----TATTKDGNTCAHIAAMQGSVGVIEELMKFDRS  213 (1015)
Q Consensus       161 A~~~g~~~iv----~~Ll~~~~~~~-----~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~  213 (1015)
                      |+..|+.+++    ++|++.+++..     +..+..|.||||+|+..|+.+++++|++++..
T Consensus       161 A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~  222 (232)
T 2rfa_A          161 LILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH  222 (232)
T ss_dssp             HHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence            9999999988    99999887643     46677777777777777777777777775544

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.97  E-value=1.8e-30  Score=265.72  Aligned_cols=193  Identities=21%  Similarity=0.325  Sum_probs=182.1

Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHhCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874         18 TSIGWTPLLIACNRGHMELVNTMLNNHA-RVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM   96 (1015)
Q Consensus        18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~   96 (1015)
                      ++.|.||||.|+..|+.+.|+.|++++. +++..|.+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~   81 (201)
T 3hra_A            2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA   81 (201)
T ss_dssp             -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence            4679999999999999999999999886 999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCC-----hHHH
Q psy14874         97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG-ASIDATDDQGQKPIHVAAQNNF-----PEVA  170 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~g-ad~n~~d~~~~t~L~~A~~~g~-----~~iv  170 (1015)
                      .|+.+++++|++..+.+++..+..|.||||+|+..|+.+++++|+++| ++++..|..|.||||+|+..++     .+++
T Consensus        82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v  161 (201)
T 3hra_A           82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV  161 (201)
T ss_dssp             TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred             cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence            999999999998888899999999999999999999999999999999 9999999999999999999998     8999


Q ss_pred             HHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcC
Q psy14874        171 QIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFD  211 (1015)
Q Consensus       171 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~  211 (1015)
                      ++|++++.+ ++..+..|.||+|+|+..|+.+++++|++++
T Consensus       162 ~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          162 KLLMENGAD-QSIKDNSGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             HHHHHCCCC-CCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            999999877 5778888999999999999999999888753

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.97  E-value=4.7e-32  Score=285.11  Aligned_cols=199  Identities=22%  Similarity=0.289  Sum_probs=173.0

Q ss_pred             ccCCCCCCcHHHHHHhcCCHHHHHHHHhCCC----CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q psy14874         15 NKQTSIGWTPLLIACNRGHMELVNTMLNNHA----RVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTA   90 (1015)
Q Consensus        15 n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~----~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~   90 (1015)
                      |.+|.+|+||||+|+..|+.+++++|++.+.    ++|..|..|.||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus         2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~   81 (236)
T 1ikn_D            2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTP   81 (236)
T ss_dssp             -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCH
T ss_pred             CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence            5678999999999999999999999999875    689999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhccC-----ccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHc
Q psy14874         91 LHLAAMNGYADLCRFLVHDHA-----AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD-QGQKPIHVAAQN  164 (1015)
Q Consensus        91 L~~A~~~g~~eiv~~Ll~~~~-----~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~-~~~t~L~~A~~~  164 (1015)
                      ||+|+..|+.+++++|++...     ..++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..
T Consensus        82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~  161 (236)
T 1ikn_D           82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL  161 (236)
T ss_dssp             HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred             HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Confidence            999999999999999997542     23677888999999999999999999999999999999998 999999999999


Q ss_pred             CChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcc
Q psy14874        165 NFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSG  214 (1015)
Q Consensus       165 g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~  214 (1015)
                      |+.+++++|++++.+ ++..+..|.||+++|+..|+.+++++|++++.+.
T Consensus       162 ~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~  210 (236)
T 1ikn_D          162 QNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN  210 (236)
T ss_dssp             TCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred             CCHHHHHHHHHcCCC-CCcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence            999999999999876 5667777777777777777777777777766543

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.97  E-value=2.4e-30  Score=254.30  Aligned_cols=157  Identities=34%  Similarity=0.525  Sum_probs=149.7

Q ss_pred             cHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy14874         23 TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADL  102 (1015)
Q Consensus        23 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~ei  102 (1015)
                      ++|+.||+.|+.++|++|+++|+++|.+|.+|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~   85 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV   85 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCC
Q psy14874        103 CRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL  180 (1015)
Q Consensus       103 v~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~  180 (1015)
                      |++|++ .++++|.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus        86 v~~Ll~-~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i  162 (169)
T 4gpm_A           86 VKLLIS-KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL  162 (169)
T ss_dssp             HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred             HHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence            999995 68899999999999999999999999999999999999999999999999999999999999999999874

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.97  E-value=1.9e-32  Score=302.43  Aligned_cols=265  Identities=12%  Similarity=0.115  Sum_probs=210.4

Q ss_pred             CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC---------------
Q psy14874         19 SIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSK---------------   83 (1015)
Q Consensus        19 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~---------------   83 (1015)
                      ..+.+|+|    ....++|++|+++|++++..|..|.++++     |+.++|++|+++|++++..               
T Consensus        21 ~~~~~~~~----~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~   91 (327)
T 1sw6_A           21 DRTAGPII----TFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNS   91 (327)
T ss_dssp             ----CCEE----ECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------
T ss_pred             cccccchh----hhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccc
Confidence            44555555    56668899999999999999999999987     9999999999999886651               


Q ss_pred             --CCCCCcHHHHHHHcCCHHHHHHHHhccCccccc-cccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy14874         84 --SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDI-LTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHV  160 (1015)
Q Consensus        84 --~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~-~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~  160 (1015)
                        .....+.+|.|+..+..+++++|+ ..+.++|. .+..|+||||+|+..|+.++|++|+++|++++.+|..|.||||+
T Consensus        92 ~~~~~~~~~~~~a~~~~~~~~~~~l~-~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~  170 (327)
T 1sw6_A           92 EGGSSNQQQQHVSFDSLLQEVNDAFP-NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVK  170 (327)
T ss_dssp             ------------CHHHHHHHHHHHCT-TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHH
T ss_pred             cccCCccchhHHHHHhhHHHHHHHHH-hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence              111223357788888888999888 56889999 89999999999999999999999999999999999999999999


Q ss_pred             HHHcCC---hHHHHHHhhcCCCCcccCCCCCchHHHHHHH----cCCHHHHHHHHhcCCc-----------------ccc
Q psy14874        161 AAQNNF---PEVAQIFLRAHPSLVTATTKDGNTCAHIAAM----QGSVGVIEELMKFDRS-----------------GVI  216 (1015)
Q Consensus       161 A~~~g~---~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~----~g~~~iv~~Ll~~~~~-----------------~~~  216 (1015)
                      |+..|+   .++++.|++.+...++..+..|.||||+|+.    .|+.++++.|++....                 +..
T Consensus       171 A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~  250 (327)
T 1sw6_A          171 AVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK  250 (327)
T ss_dssp             HHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------
T ss_pred             HHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC
Confidence            999998   6777888877655578899999999999999    8999999999986321                 222


Q ss_pred             cccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHH
Q psy14874        217 SARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHV  296 (1015)
Q Consensus       217 ~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~  296 (1015)
                      ....+..|.||||.|+.      +++|+++  +++..|..|.||||+|+..|+.+++++|++.|++....+..|.|||++
T Consensus       251 ~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~  322 (327)
T 1sw6_A          251 PNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDF  322 (327)
T ss_dssp             ---------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred             cccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence            23345678899999985      8999998  578899999999999999999999999999999999999999999999


Q ss_pred             HHHcC
Q psy14874        297 AAYFG  301 (1015)
Q Consensus       297 A~~~~  301 (1015)
                      |+..|
T Consensus       323 A~~~g  327 (327)
T 1sw6_A          323 GAGLE  327 (327)
T ss_dssp             TCC--
T ss_pred             HHhcC
Confidence            97654

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.97  E-value=4.4e-31  Score=277.71  Aligned_cols=217  Identities=26%  Similarity=0.386  Sum_probs=173.7

Q ss_pred             ccCCccHHHHHHhCCCHHHHHHHHHhcch---hhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHH
Q psy14874        368 QENGYNPLHLACFGGHVTVVGLLLSRAAD---LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHT  444 (1015)
Q Consensus       368 ~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~---~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~  444 (1015)
                      +.+|.||||+|+..|+.+++++|++.+..   .++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+
T Consensus         5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~   84 (236)
T 1ikn_D            5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL   84 (236)
T ss_dssp             --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHH
T ss_pred             CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence            45678888888888888888888877653   367778889999999999999999999999999999999999999999


Q ss_pred             HHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCc
Q psy14874        445 AARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN  524 (1015)
Q Consensus       445 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~  524 (1015)
                      |+..|+.+++++|+++|++....                    ..++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus        85 A~~~~~~~~v~~Ll~~~~~~~~~--------------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~  144 (236)
T 1ikn_D           85 ACEQGCLASVGVLTQSCTTPHLH--------------------SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN  144 (236)
T ss_dssp             HHHHTCHHHHHHHHHSTTTTSSS--------------------CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred             HHHcCCHHHHHHHHhcccchhHH--------------------HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            99999999999999988764322                    1234557788999999999999999999999988884


Q ss_pred             chhhHHHhhhhccccccccCC-CCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHc
Q psy14874        525 ATDKVCDALLTHKAFINSKSR-VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL  603 (1015)
Q Consensus       525 ~~~~~~~~ll~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~  603 (1015)
                                       .++. .|.||||+|+..|+.++|++|++.+ .+++..+..|.||||+|+..|+.+++++|+++
T Consensus       145 -----------------~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~  206 (236)
T 1ikn_D          145 -----------------AQEPCNGRTALHLAVDLQNPDLVSLLLKCG-ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQL  206 (236)
T ss_dssp             -----------------CCCTTTCCCHHHHHHHTTCHHHHHHHHTTT-CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTT
T ss_pred             -----------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcccCCCCCHHHHHHccCchHHHHHHHHc
Confidence                             4555 7888999999888889998888764 45678888888999999888888999999888


Q ss_pred             CCCCC--CCCCCCCCHHHHHH
Q psy14874        604 GASID--ATDDQGQKPIHVAA  622 (1015)
Q Consensus       604 ga~~~--~~d~~g~t~l~~A~  622 (1015)
                      |++..  .++..|.||.+.+.
T Consensus       207 ga~~~~~~~~~~~~~~~~~~~  227 (236)
T 1ikn_D          207 TLENLQMLPESEDEESYDTES  227 (236)
T ss_dssp             SCGGGSSCCCCCTTTCCCCC-
T ss_pred             chhhhhcCCccchHHHHhhhc
Confidence            88765  77788888776543

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.97  E-value=4.2e-29  Score=255.45  Aligned_cols=192  Identities=21%  Similarity=0.331  Sum_probs=166.5

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHhhCCC-CcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHH
Q psy14874        403 KNGKTCLHIAATHGHLQMVEVLLGQGA-EINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGL  481 (1015)
Q Consensus       403 ~~g~t~L~~A~~~g~~~iv~~Ll~~ga-~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~  481 (1015)
                      ..+.||||.|+..|+.+.++.|++.+. +++..|..|.||||+|+..|+.+++++|+++|++++..              
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--------------   68 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQ--------------   68 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC--------------
T ss_pred             cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC--------------
Confidence            457788888888888888888888765 88888888888888888888888888888888887654              


Q ss_pred             HHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHH-hcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcH
Q psy14874        482 LLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL-GQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA  560 (1015)
Q Consensus       482 ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~  560 (1015)
                                  +..|.||||.|+..|+.+++++|+ ..++++                 +..+..|.||||+|+..|+.
T Consensus        69 ------------~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-----------------~~~~~~g~t~L~~A~~~~~~  119 (201)
T 3hra_A           69 ------------NSISDSPYLYAGAQGRTEILAYMLKHATPDL-----------------NKHNRYGGNALIPAAEKGHI  119 (201)
T ss_dssp             ------------CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT-----------------TCCCTTSCCSHHHHHHTTCH
T ss_pred             ------------CCCCCCHHHHHHHcCCHHHHHHHHhccCccc-----------------ccccCCCCcHHHHHHHcCCH
Confidence                        577889999999999999999998 455565                 55667889999999999999


Q ss_pred             HHHHHHHhcCCccccccccCCCCHHHHHHHcCC-----HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHH
Q psy14874        561 DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ-----LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR  635 (1015)
Q Consensus       561 ~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~-----~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~  635 (1015)
                      +++++|++.+..+++..+..|.||||+|+..++     .+++++|+++|++++.+|..|+|||++|+.+++.+++++|++
T Consensus       120 ~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~  199 (201)
T 3hra_A          120 DNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQ  199 (201)
T ss_dssp             HHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred             HHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHh
Confidence            999999988877888889999999999999888     999999999999999999999999999999999999999987


Q ss_pred             hC
Q psy14874        636 AH  637 (1015)
Q Consensus       636 ~~  637 (1015)
                      ++
T Consensus       200 ~G  201 (201)
T 3hra_A          200 YN  201 (201)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.97  E-value=2.9e-31  Score=293.08  Aligned_cols=238  Identities=16%  Similarity=0.104  Sum_probs=193.8

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCC-----------------CCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVF-----------------DQEGRSALHLAAEHGYLKVCDALLTH   76 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----------------d~~g~t~L~~A~~~g~~~iv~~Ll~~   76 (1015)
                      +|.+|..|.|+++     |+.++|++|+++|++.+..                 .....+.+|.|+..+..+++++|++.
T Consensus        45 i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~  119 (327)
T 1sw6_A           45 IMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT  119 (327)
T ss_dssp             CEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTS
T ss_pred             cccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhc
Confidence            6888999999987     9999999999999876541                 11112345888888889999999999


Q ss_pred             CCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCC---HHHHHHHHHCC-CCCCCCC
Q psy14874         77 KAFINS-KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ---LQVCKLLLDLG-ASIDATD  151 (1015)
Q Consensus        77 ga~in~-~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~---~~ivk~Ll~~g-ad~n~~d  151 (1015)
                      |+++|. ++..|.||||+|+..|+.++|++|++ .+++++..+..|+||||+|+..|+   .++++.|++.+ ++++.+|
T Consensus       120 g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~-~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d  198 (327)
T 1sw6_A          120 QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK-HGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED  198 (327)
T ss_dssp             CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC
T ss_pred             CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC
Confidence            999999 89999999999999999999999995 589999999999999999999998   78888888887 7899999


Q ss_pred             CCCCcHHHHHHH----cCChHHHHHHhhcC-------------------CCCcccCCCCCchHHHHHHHcCCHHHHHHHH
Q psy14874        152 DQGQKPIHVAAQ----NNFPEVAQIFLRAH-------------------PSLVTATTKDGNTCAHIAAMQGSVGVIEELM  208 (1015)
Q Consensus       152 ~~~~t~L~~A~~----~g~~~iv~~Ll~~~-------------------~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll  208 (1015)
                      ..|.||||+|+.    .|+.+++++|++.+                   ...++..+..|.||||.|+.      +++|+
T Consensus       199 ~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll  272 (327)
T 1sw6_A          199 SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWII  272 (327)
T ss_dssp             TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHH
T ss_pred             CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHH
Confidence            999999999999    89999999999873                   33367788999999999985      88888


Q ss_pred             hcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q psy14874        209 KFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNG  268 (1015)
Q Consensus       209 ~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~  268 (1015)
                      +.+     ....+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+++|
T Consensus       273 ~~~-----~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g  327 (327)
T 1sw6_A          273 ANM-----LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE  327 (327)
T ss_dssp             HHT-----TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred             HhC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence            863     2334567999999999999999999999999999999999999999998764

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.96  E-value=3.8e-30  Score=274.19  Aligned_cols=193  Identities=24%  Similarity=0.289  Sum_probs=170.2

Q ss_pred             CCCcHHHHHHhcCCHH----HHHHHHhCCCCCCC----CCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCC-----
Q psy14874         20 IGWTPLLIACNRGHME----LVNTMLNNHARVDV----FDQEGRSALHLAAEH---GYLKVCDALLTHKAFINSK-----   83 (1015)
Q Consensus        20 ~g~t~L~~A~~~g~~~----iv~~Ll~~g~~~~~----~d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~in~~-----   83 (1015)
                      .|+||||.||+.|+.+    ++++|+++|++++.    .|..|+||||+|+..   |+.+++++|+++|++++..     
T Consensus         1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~   80 (256)
T 2etb_A            1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN   80 (256)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence            4899999999999997    67888889999998    899999999999999   9999999999999887633     


Q ss_pred             ------CCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccC-------------CCCHHHHHHHcCCHHHHHHHHH--
Q psy14874         84 ------SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR-------------KQTPLHLAAEAGQLQVCKLLLD--  142 (1015)
Q Consensus        84 ------~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~-------------g~t~L~~Aa~~g~~~ivk~Ll~--  142 (1015)
                            +..|.||||+|+..|+.+++++|++ .+++++..+..             |.||||+|+..|+.+++++|++  
T Consensus        81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~  159 (256)
T 2etb_A           81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVE-NGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP  159 (256)
T ss_dssp             CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred             cccccccccCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence                  3679999999999999999999995 57888888876             9999999999999999999999  


Q ss_pred             -CCCCCCCCCCCCCcHHHHHHH--cCChH-------HHHHHhhcCCCCc------ccCCCCCchHHHHHHHcCCHHHHHH
Q psy14874        143 -LGASIDATDDQGQKPIHVAAQ--NNFPE-------VAQIFLRAHPSLV------TATTKDGNTCAHIAAMQGSVGVIEE  206 (1015)
Q Consensus       143 -~gad~n~~d~~~~t~L~~A~~--~g~~~-------iv~~Ll~~~~~~~------~~~~~~g~t~L~~A~~~g~~~iv~~  206 (1015)
                       +|+++|.+|..|.||||+|+.  .++.+       ++++|++++.+..      +..+..|.||||+|+..|+.+++++
T Consensus       160 ~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~  239 (256)
T 2etb_A          160 HQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRH  239 (256)
T ss_dssp             SCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             ccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHH
Confidence             999999999999999999998  78888       9999998877632      6677788888888888888888888


Q ss_pred             HHhcCCc
Q psy14874        207 LMKFDRS  213 (1015)
Q Consensus       207 Ll~~~~~  213 (1015)
                      |++++..
T Consensus       240 Ll~~g~~  246 (256)
T 2etb_A          240 ILQREFS  246 (256)
T ss_dssp             HHHHHHH
T ss_pred             HHhCCCC
Confidence            8876544

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.96  E-value=1.3e-28  Score=241.96  Aligned_cols=159  Identities=37%  Similarity=0.580  Sum_probs=132.5

Q ss_pred             cHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhh
Q psy14874        407 TCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRA  486 (1015)
Q Consensus       407 t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~  486 (1015)
                      ++|+.|++.|+.++|+.|+++|+|+|.+|..|.|||++|+..++.+++++|+++|++++..                   
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~-------------------   66 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAK-------------------   66 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-------------------
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhh-------------------
Confidence            4688899999999999999999999999999999999999999999999999998887754                   


Q ss_pred             hhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHH
Q psy14874        487 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL  566 (1015)
Q Consensus       487 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L  566 (1015)
                             |..|.||||+|+..|+.++|++|+++|+++                 +.++..|+||||+|+..|+.++|++|
T Consensus        67 -------d~~g~TpLh~A~~~g~~~~v~~Ll~~gadv-----------------n~~d~~G~TpLh~A~~~g~~~~v~~L  122 (169)
T 4gpm_A           67 -------DSDGRTPLHHAAENGHKEVVKLLISKGADV-----------------NAKDSDGRTPLHHAAENGHKEVVKLL  122 (169)
T ss_dssp             -------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             -------ccCCCCHHHHHHHcCCHHHHHHHHHCcCCC-----------------CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence                   678899999999999999999999998888                 45667888888888888888888888


Q ss_pred             HhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy14874        567 VHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA  609 (1015)
Q Consensus       567 l~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~  609 (1015)
                      ++.+ .+++..|.+|+||||+|+..|+.+++++|+++||+++-
T Consensus       123 l~~g-ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~  164 (169)
T 4gpm_A          123 ISKG-ADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH  164 (169)
T ss_dssp             HHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred             HHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence            8765 45678888899999999999999999999999988764

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.96  E-value=2.6e-29  Score=267.68  Aligned_cols=217  Identities=21%  Similarity=0.234  Sum_probs=177.5

Q ss_pred             CCCcHHHHHHHcCCHH----HHHHHhhCCCCccc----CCCCCCCHHHHHHHh---CCHHHHHHHHhcCCCCcccccccc
Q psy14874        404 NGKTCLHIAATHGHLQ----MVEVLLGQGAEINA----TDKGGARSIHTAARY---GHVGIINTLLQKGEKVDVTTNNLA  472 (1015)
Q Consensus       404 ~g~t~L~~A~~~g~~~----iv~~Ll~~ga~i~~----~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~  472 (1015)
                      .|+||||.|+..|+.+    ++++|+++|++++.    .|..|.||||+|+..   |+.+++++|+++|++++.......
T Consensus         1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~   80 (256)
T 2etb_A            1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN   80 (256)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence            3788999999999986    66777778999998    889999999999998   999999999998877653210000


Q ss_pred             cCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHH
Q psy14874        473 CGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALH  552 (1015)
Q Consensus       473 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~  552 (1015)
                                     ......|..|.||||+|+..|+.+++++|+++|++++..+....    ...+.+..+..|.||||
T Consensus        81 ---------------~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~----~~~~~~~~~~~g~tpL~  141 (256)
T 2etb_A           81 ---------------AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRF----FQKHQGTCFYFGELPLS  141 (256)
T ss_dssp             ---------------CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG----GSCCSSSCCCSCSSHHH
T ss_pred             ---------------cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccc----ccccccccccCCCCHHH
Confidence                           00112356799999999999999999999999999976542100    00111222334999999


Q ss_pred             HHHHcCcHHHHHHHHhc--CCccccccccCCCCHHHHHHH--cCCHH-------HHHHHHHcCCCC-------CCCCCCC
Q psy14874        553 LAAMNGYADLCRFLVHD--HAAVIDILTLRKQTPLHLAAE--AGQLQ-------VCKLLLDLGASI-------DATDDQG  614 (1015)
Q Consensus       553 ~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~T~L~~A~~--~~~~~-------iv~~Ll~~ga~~-------~~~d~~g  614 (1015)
                      +|+..|+.++|++|++.  .+.+++.+|..|+||||+|+.  .++.+       ++++|+++|+++       +.+|..|
T Consensus       142 ~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g  221 (256)
T 2etb_A          142 LAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQG  221 (256)
T ss_dssp             HHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTS
T ss_pred             HHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCC
Confidence            99999999999999985  566789999999999999999  88888       999999999999       8999999


Q ss_pred             CCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874        615 QKPIHVAAQNNFPEVAQIFLRAHPS  639 (1015)
Q Consensus       615 ~t~l~~A~~~~~~~~~~~ll~~~~~  639 (1015)
                      +||||+|+..|+.+++++|+++++.
T Consensus       222 ~tpL~~A~~~g~~~~v~~Ll~~g~~  246 (256)
T 2etb_A          222 LTPLKLAAKEGKIEIFRHILQREFS  246 (256)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHhCCHHHHHHHHhCCCC
Confidence            9999999999999999999998654

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.96  E-value=2.2e-29  Score=271.01  Aligned_cols=165  Identities=22%  Similarity=0.229  Sum_probs=131.3

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHh----CCCCCC----CCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCC--
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLN----NHARVD----VFDQEGRSALHLAAEH---GYLKVCDALLTHKAFI--   80 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~----~g~~~~----~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~i--   80 (1015)
                      .+..|..|+||||.||+.|+.++|+.|++    .+++++    ..|..|+||||+|+..   |+.+++++|+++|+++  
T Consensus         6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~   85 (273)
T 2pnn_A            6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS   85 (273)
T ss_dssp             -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence            46678999999999999999998888886    566665    3588999999999987   9999999999998753  


Q ss_pred             -----CC----CCCCCCcHHHHHHHcCCHHHHHHHHhccCcccccccc--------------CCCCHHHHHHHcCCHHHH
Q psy14874         81 -----NS----KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTL--------------RKQTPLHLAAEAGQLQVC  137 (1015)
Q Consensus        81 -----n~----~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~--------------~g~t~L~~Aa~~g~~~iv  137 (1015)
                           +.    .+..|.||||+|+..|+.++|++|++ .+++++..+.              .|.||||+|+..|+.+++
T Consensus        86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v  164 (273)
T 2pnn_A           86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVE-NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV  164 (273)
T ss_dssp             HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHH
T ss_pred             hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence                 22    45678888888888888888888885 4777777776              688888888888888888


Q ss_pred             HHHHH---CCCCCCCCCCCCCcHHHHHHHcCC---------hHHHHHHhhcCCC
Q psy14874        138 KLLLD---LGASIDATDDQGQKPIHVAAQNNF---------PEVAQIFLRAHPS  179 (1015)
Q Consensus       138 k~Ll~---~gad~n~~d~~~~t~L~~A~~~g~---------~~iv~~Ll~~~~~  179 (1015)
                      ++|++   +|++++.+|..|.||||+|+..|+         .+++++|++++.+
T Consensus       165 ~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~  218 (273)
T 2pnn_A          165 KFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK  218 (273)
T ss_dssp             HHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh
Confidence            88888   888888888888888888888777         5677777766554

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.96  E-value=1.1e-28  Score=250.08  Aligned_cols=167  Identities=30%  Similarity=0.447  Sum_probs=159.8

Q ss_pred             hhHhhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q psy14874         10 ISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRT   89 (1015)
Q Consensus        10 ~~~~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t   89 (1015)
                      +...+|.+|..|+||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus        24 ~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  103 (192)
T 2rfm_A           24 LDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT  103 (192)
T ss_dssp             HHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred             hHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Confidence            34457899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHH
Q psy14874         90 ALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEV  169 (1015)
Q Consensus        90 ~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~i  169 (1015)
                      |||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||+|+|+..|+.++
T Consensus       104 ~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~  182 (192)
T 2rfm_A          104 PLMWSIIFGYSEMSYFLLE-HGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEV  182 (192)
T ss_dssp             HHHHHHHHTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred             HHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHH
Confidence            9999999999999999995 688999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcC
Q psy14874        170 AQIFLRAH  177 (1015)
Q Consensus       170 v~~Ll~~~  177 (1015)
                      +++|++.+
T Consensus       183 v~~Ll~~~  190 (192)
T 2rfm_A          183 IKIFTEVR  190 (192)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhcc
Confidence            99999864

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.95  E-value=3e-28  Score=262.20  Aligned_cols=203  Identities=22%  Similarity=0.293  Sum_probs=141.9

Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh----CCCCCC----CCCCCCCcHHHHHHHc---CCHHHHHHHHhccCc
Q psy14874         44 HARVDVFDQEGRSALHLAAEHGYLKVCDALLT----HKAFIN----SKSRVGRTALHLAAMN---GYADLCRFLVHDHAA  112 (1015)
Q Consensus        44 g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~----~ga~in----~~~~~g~t~L~~A~~~---g~~eiv~~Ll~~~~~  112 (1015)
                      ++..+..|..|+||||.|++.|+.++|+.|++    .+++++    ..+..|.||||+|+..   |+.+++++|++.+ +
T Consensus         3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~g-a   81 (273)
T 2pnn_A            3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVA-R   81 (273)
T ss_dssp             --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHH-H
T ss_pred             cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhh-c
Confidence            45566789999999999999999999888886    667666    4578999999999987   9999999999653 2


Q ss_pred             c-------ccc----cccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC--------------CCCcHHHHHHHcCCh
Q psy14874        113 V-------IDI----LTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD--------------QGQKPIHVAAQNNFP  167 (1015)
Q Consensus       113 ~-------i~~----~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~--------------~~~t~L~~A~~~g~~  167 (1015)
                      .       ++.    .+..|.||||+|+..|+.+++++|+++|++++..+.              .|.||||+|+..|+.
T Consensus        82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~  161 (273)
T 2pnn_A           82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL  161 (273)
T ss_dssp             HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH
T ss_pred             cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCH
Confidence            2       222    566899999999999999999999999999999987              677888888888888


Q ss_pred             HHHHHHhh---cCCCCcccCCCCCchHHHHHHHcCC---------HHHHHHHHhcCCcccc----cccCCCCCCcHHHHH
Q psy14874        168 EVAQIFLR---AHPSLVTATTKDGNTCAHIAAMQGS---------VGVIEELMKFDRSGVI----SARNRVTEATPLQLA  231 (1015)
Q Consensus       168 ~iv~~Ll~---~~~~~~~~~~~~g~t~L~~A~~~g~---------~~iv~~Ll~~~~~~~~----~~~~~~~~~t~L~~A  231 (1015)
                      +++++|++   .+.+ ++..+..|.||||+|+..|+         .+++++|++.+.+...    ....+..|.||||+|
T Consensus       162 ~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A  240 (273)
T 2pnn_A          162 AIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA  240 (273)
T ss_dssp             HHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred             HHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence            88888887   5554 56677777777777777665         4444455443332210    011223344444444


Q ss_pred             HHcCCHHHHHHHHHcCC
Q psy14874        232 AEGGHANVVRVLVKAGA  248 (1015)
Q Consensus       232 ~~~g~~~iv~~Ll~~ga  248 (1015)
                      ++.|+.+++++|+++|+
T Consensus       241 ~~~g~~~iv~~Ll~~ga  257 (273)
T 2pnn_A          241 ASSGKIGVLAYILQREI  257 (273)
T ss_dssp             HHTTCHHHHHHHHHHHT
T ss_pred             HHhChHHHHHHHHHCCC
Confidence            44444444444444444

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.95  E-value=1.8e-28  Score=262.00  Aligned_cols=195  Identities=20%  Similarity=0.260  Sum_probs=163.8

Q ss_pred             CCCCCcHHHHHHhcCCHHH----HHHHHhCCCCCCCCC----CCCCcHHHHHH---HcCCHHHHHHHHhCCCC-------
Q psy14874         18 TSIGWTPLLIACNRGHMEL----VNTMLNNHARVDVFD----QEGRSALHLAA---EHGYLKVCDALLTHKAF-------   79 (1015)
Q Consensus        18 ~~~g~t~L~~A~~~g~~~i----v~~Ll~~g~~~~~~d----~~g~t~L~~A~---~~g~~~iv~~Ll~~ga~-------   79 (1015)
                      +..|+||||.||+.|+.+.    +++|++.|++++..+    ..|+||||+|+   +.|+.+++++|++.|++       
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~   81 (260)
T 3jxi_A            2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF   81 (260)
T ss_dssp             CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred             ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence            4678999999999999995    555555999998665    77999999999   77999999999998854       


Q ss_pred             ----CCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccc--------------cCCCCHHHHHHHcCCHHHHHHHH
Q psy14874         80 ----INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILT--------------LRKQTPLHLAAEAGQLQVCKLLL  141 (1015)
Q Consensus        80 ----in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~--------------~~g~t~L~~Aa~~g~~~ivk~Ll  141 (1015)
                          ++..+..|.||||+|+..|+.++|++|++ .+++++..+              ..|.||||+|+..|+.+++++|+
T Consensus        82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll  160 (260)
T 3jxi_A           82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVE-KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT  160 (260)
T ss_dssp             HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred             hcccccccccCCCCHHHHHHHcCCHHHHHHHHh-CCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence                44455589999999999999999999995 578888887              57999999999999999999999


Q ss_pred             H---CCCCCCCCCCCCCcHHHHHHHcCC---------hHHHHHHhhcCCCCc------ccCCCCCchHHHHHHHcCCHHH
Q psy14874        142 D---LGASIDATDDQGQKPIHVAAQNNF---------PEVAQIFLRAHPSLV------TATTKDGNTCAHIAAMQGSVGV  203 (1015)
Q Consensus       142 ~---~gad~n~~d~~~~t~L~~A~~~g~---------~~iv~~Ll~~~~~~~------~~~~~~g~t~L~~A~~~g~~~i  203 (1015)
                      +   .|++++.+|..|.||||+|+..|+         .+++++|++++.+..      +..+..|.||||+|+..|+.++
T Consensus       161 ~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~  240 (260)
T 3jxi_A          161 ENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI  240 (260)
T ss_dssp             HCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred             hccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence            9   899999999999999999998887         688899988876532      4567777777777777777777


Q ss_pred             HHHHHhcCCc
Q psy14874        204 IEELMKFDRS  213 (1015)
Q Consensus       204 v~~Ll~~~~~  213 (1015)
                      +++|++++..
T Consensus       241 v~~Ll~~g~~  250 (260)
T 3jxi_A          241 FQHIIRREIA  250 (260)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHhCCC
Confidence            7777775544

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.95  E-value=1.5e-27  Score=235.89  Aligned_cols=159  Identities=23%  Similarity=0.322  Sum_probs=153.4

Q ss_pred             CCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874         20 IGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY   99 (1015)
Q Consensus        20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~   99 (1015)
                      .|.||||.|++.|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   81 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY   81 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874        100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~  179 (1015)
                      .+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||+|+|+..|+.+++++|++++..
T Consensus        82 ~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~  160 (167)
T 3v31_A           82 TDIVKMLLD-CGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK  160 (167)
T ss_dssp             HHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence            999999995 5888999999999999999999999999999999999999999999999999999999999999987654

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.95  E-value=2.9e-27  Score=234.15  Aligned_cols=160  Identities=31%  Similarity=0.450  Sum_probs=150.4

Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874         17 QTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM   96 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~   96 (1015)
                      ....+.|||+.||+.|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus        10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   89 (169)
T 2y1l_E           10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL   89 (169)
T ss_dssp             ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874         97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      .|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|++.
T Consensus        90 ~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~  168 (169)
T 2y1l_E           90 FGHLEIVEVLLK-NGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL  168 (169)
T ss_dssp             TTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred             cCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence            999999999995 6888999999999999999999999999999999999999999999999999999999999999875


Q ss_pred             C
Q psy14874        177 H  177 (1015)
Q Consensus       177 ~  177 (1015)
                      |
T Consensus       169 G  169 (169)
T 2y1l_E          169 N  169 (169)
T ss_dssp             -
T ss_pred             C
Confidence            4

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.95  E-value=3e-28  Score=260.18  Aligned_cols=221  Identities=20%  Similarity=0.238  Sum_probs=173.9

Q ss_pred             CCCCCcHHHHHHHcCCHHH----HHHHhhCCCCcccCC----CCCCCHHHHHH---HhCCHHHHHHHHhcCCCCcccccc
Q psy14874        402 DKNGKTCLHIAATHGHLQM----VEVLLGQGAEINATD----KGGARSIHTAA---RYGHVGIINTLLQKGEKVDVTTNN  470 (1015)
Q Consensus       402 d~~g~t~L~~A~~~g~~~i----v~~Ll~~ga~i~~~~----~~g~t~L~~A~---~~g~~~~v~~Ll~~g~~~~~~~~~  470 (1015)
                      +..|+|+||.|++.|+.+.    +++|++.|++++..+    ..|.||||+|+   +.|+.+++++|+++|++...... 
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~-   80 (260)
T 3jxi_A            2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE-   80 (260)
T ss_dssp             CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH-
T ss_pred             ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh-
Confidence            4567888999999998884    455555888888766    66899999998   67889999999988765432100 


Q ss_pred             cccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcH
Q psy14874        471 LACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTA  550 (1015)
Q Consensus       471 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~  550 (1015)
                                 +   ........|..|.||||+|+..|+.++|++|+++|++++..+.-.   .....+.+..+..|.||
T Consensus        81 -----------~---~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~---~~~~~~~~~~~~~g~tp  143 (260)
T 3jxi_A           81 -----------F---INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR---FFQPKDEGGYFYFGELP  143 (260)
T ss_dssp             -----------H---HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEEC---CCSSSCCCCSCCSCSSH
T ss_pred             -----------h---hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccc---ccCcccccccccCCCCH
Confidence                       0   001122335689999999999999999999999999997643200   00001112222579999


Q ss_pred             HHHHHHcCcHHHHHHHHhc--CCccccccccCCCCHHHHHHHcCC---------HHHHHHHHHcCCCC-------CCCCC
Q psy14874        551 LHLAAMNGYADLCRFLVHD--HAAVIDILTLRKQTPLHLAAEAGQ---------LQVCKLLLDLGASI-------DATDD  612 (1015)
Q Consensus       551 L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~T~L~~A~~~~~---------~~iv~~Ll~~ga~~-------~~~d~  612 (1015)
                      ||+|+..|+.++|++|++.  .+.+++.+|..|+||||+|+..++         .+++++|+++|+++       +.+|.
T Consensus       144 L~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~  223 (260)
T 3jxi_A          144 LSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN  223 (260)
T ss_dssp             HHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred             HHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccC
Confidence            9999999999999999985  566779999999999999999888         79999999999999       67999


Q ss_pred             CCCCHHHHHHhcCChHHHHHHHHhCCcc
Q psy14874        613 QGQKPIHVAAQNNFPEVAQIFLRAHPSL  640 (1015)
Q Consensus       613 ~g~t~l~~A~~~~~~~~~~~ll~~~~~~  640 (1015)
                      .|+||||+|+..|+.+++++|+++++..
T Consensus       224 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~  251 (260)
T 3jxi_A          224 DGLSPLMMAAKTGKIGIFQHIIRREIAD  251 (260)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence            9999999999999999999999987543

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.95  E-value=1.9e-27  Score=236.32  Aligned_cols=169  Identities=21%  Similarity=0.287  Sum_probs=152.5

Q ss_pred             CCcHHHHHHhcCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874         21 GWTPLLIACNRGHMELVNTMLNNHAR-VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY   99 (1015)
Q Consensus        21 g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~   99 (1015)
                      +.||||.|++.|+.+++++|+++|.+ ++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   81 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY   81 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence            57899999999999999999999987 88889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874        100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~  179 (1015)
                      .+++++|+ +.+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++.+
T Consensus        82 ~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~  160 (172)
T 3v30_A           82 TDIVGLLL-ERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILK  160 (172)
T ss_dssp             HHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence            99999999 56888999999999999999999999999999999999999999999999999999999999999998776


Q ss_pred             CcccCCCCCchH
Q psy14874        180 LVTATTKDGNTC  191 (1015)
Q Consensus       180 ~~~~~~~~g~t~  191 (1015)
                       ....+..|.||
T Consensus       161 -~~~~~~~~~~p  171 (172)
T 3v30_A          161 -LFQSNLVPADP  171 (172)
T ss_dssp             -HSCC-------
T ss_pred             -HhcccCCCCCC
Confidence             34445555443

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.95  E-value=4e-27  Score=231.47  Aligned_cols=159  Identities=27%  Similarity=0.355  Sum_probs=145.1

Q ss_pred             CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q psy14874         19 SIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNG   98 (1015)
Q Consensus        19 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g   98 (1015)
                      ....||||.|++.|+.++|++|+++|++++..|..|+||||+|+. |+.+++++|+++|++++.++..|.||||+|+..|
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   81 (162)
T 1ihb_A            3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG   81 (162)
T ss_dssp             --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence            356799999999999999999999999999999999999999999 9999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCChHHHHHHhhcC
Q psy14874         99 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS-IDATDDQGQKPIHVAAQNNFPEVAQIFLRAH  177 (1015)
Q Consensus        99 ~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad-~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~  177 (1015)
                      +.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|++++
T Consensus        82 ~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  160 (162)
T 1ihb_A           82 FLDTLQTLLE-FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  160 (162)
T ss_dssp             CHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             CHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence            9999999995 5788899999999999999999999999999999998 5889999999999999999999999999887


Q ss_pred             CC
Q psy14874        178 PS  179 (1015)
Q Consensus       178 ~~  179 (1015)
                      ++
T Consensus       161 Ad  162 (162)
T 1ihb_A          161 AG  162 (162)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.94  E-value=1.3e-27  Score=256.88  Aligned_cols=190  Identities=23%  Similarity=0.302  Sum_probs=169.3

Q ss_pred             CCCcHHHHHHhcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CCCCCCCCCCcHHHHHH-
Q psy14874         20 IGWTPLLIACNRGHMELVNTMLNNHAR--VDVFDQEGRSALHLAAEHGYLKVCDALLTHKA-FINSKSRVGRTALHLAA-   95 (1015)
Q Consensus        20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga-~in~~~~~g~t~L~~A~-   95 (1015)
                      .+++++|.|+..|+.+.++.+++.+.+  +|..|.+|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+ 
T Consensus        75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~  154 (276)
T 4hbd_A           75 ACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTAL  154 (276)
T ss_dssp             HHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGG
T ss_pred             HhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHH
Confidence            356788999999999999999887766  88889999999999999999999999999998 89999999999999999 


Q ss_pred             ----HcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHH
Q psy14874         96 ----MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQ  171 (1015)
Q Consensus        96 ----~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~  171 (1015)
                          ..++.+++++|++ .+...+..+..|+||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.++++
T Consensus       155 ~~~~~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~  233 (276)
T 4hbd_A          155 ATLKTQDDIETVLQLFR-LGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAG  233 (276)
T ss_dssp             CCCCSHHHHHHHHHHHH-HSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred             HHhhhhhhHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence                6688999999995 45677888888999999999999999999999999999999999999999999999999999


Q ss_pred             HHhh-cCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcC
Q psy14874        172 IFLR-AHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFD  211 (1015)
Q Consensus       172 ~Ll~-~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~  211 (1015)
                      +|++ .+.+ ++..+..|.||||+|+..|+.+++++|+++.
T Consensus       234 ~Ll~~~gad-~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~  273 (276)
T 4hbd_A          234 LLLAVPSCD-ISLTDRDGSTALMVALDAGQSEIASMLYSRM  273 (276)
T ss_dssp             HHHTSTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred             HHHhcCCCC-CcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            9999 4544 6788889999999999999999999888743

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.94  E-value=1.4e-26  Score=225.08  Aligned_cols=151  Identities=29%  Similarity=0.413  Sum_probs=145.2

Q ss_pred             CCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy14874         21 GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA  100 (1015)
Q Consensus        21 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~  100 (1015)
                      +.||||.|++.|+.++|++|+++|++++ .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus         2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   80 (153)
T 1awc_B            2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA   80 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred             ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence            4689999999999999999999999887 688999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHH
Q psy14874        101 DLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF  173 (1015)
Q Consensus       101 eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~L  173 (1015)
                      +++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus        81 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           81 NIVEVLLK-HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            99999994 6889999999999999999999999999999999999999999999999999999999999987

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.94  E-value=9.3e-27  Score=250.17  Aligned_cols=167  Identities=25%  Similarity=0.320  Sum_probs=159.6

Q ss_pred             hHhhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCC-CCCCCCCCCCcHHHHHH-----HcCCHHHHHHHHhCCCCCCCCC
Q psy14874         11 SKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHA-RVDVFDQEGRSALHLAA-----EHGYLKVCDALLTHKAFINSKS   84 (1015)
Q Consensus        11 ~~~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~d~~g~t~L~~A~-----~~g~~~iv~~Ll~~ga~in~~~   84 (1015)
                      ...+|.+|.+|+||||+||+.|+.++|++|+++|+ +++..|..|.||||+|+     ..|+.+++++|++.|++++..+
T Consensus       101 ~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~  180 (276)
T 4hbd_A          101 DYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKAS  180 (276)
T ss_dssp             HHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCT
T ss_pred             hhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccC
Confidence            34589999999999999999999999999999998 99999999999999999     6789999999999999999999


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHH
Q psy14874         85 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQ  163 (1015)
Q Consensus        85 ~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~-~gad~n~~d~~~~t~L~~A~~  163 (1015)
                      ..|.||||+|+..|+.++|++|++ .+++++..|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+.
T Consensus       181 ~~g~tpLh~A~~~g~~~~v~~Ll~-~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~  259 (276)
T 4hbd_A          181 QAGQTALMLAVSHGRVDVVKALLA-CEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALD  259 (276)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH
Confidence            999999999999999999999995 588999999999999999999999999999999 899999999999999999999


Q ss_pred             cCChHHHHHHhhcCC
Q psy14874        164 NNFPEVAQIFLRAHP  178 (1015)
Q Consensus       164 ~g~~~iv~~Ll~~~~  178 (1015)
                      .|+.+++++|+++..
T Consensus       260 ~g~~~iv~~Ll~~~~  274 (276)
T 4hbd_A          260 AGQSEIASMLYSRMN  274 (276)
T ss_dssp             HTCHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHhccC
Confidence            999999999998753

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.94  E-value=2.2e-29  Score=279.79  Aligned_cols=264  Identities=17%  Similarity=0.043  Sum_probs=119.5

Q ss_pred             cHHHHHHh-cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---CCCCCCCCcHHHHHHHcC
Q psy14874         23 TPLLIACN-RGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI---NSKSRVGRTALHLAAMNG   98 (1015)
Q Consensus        23 t~L~~A~~-~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i---n~~~~~g~t~L~~A~~~g   98 (1015)
                      +.+++|.. .++.+++++|+++|.+.       +||||+|++.|+.++|++|+++|+..   +..+..|.||||+|+.+|
T Consensus        67 l~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G  139 (376)
T 2aja_A           67 LCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG  139 (376)
T ss_dssp             HHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcC
Confidence            34444444 34455555555544332       35555555555555555555555411   112223445555555555


Q ss_pred             CHHHHHHHHhccC----ccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCcHHHHHH-HcCChHHHH
Q psy14874         99 YADLCRFLVHDHA----AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA--TDDQGQKPIHVAA-QNNFPEVAQ  171 (1015)
Q Consensus        99 ~~eiv~~Ll~~~~----~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~--~d~~~~t~L~~A~-~~g~~~iv~  171 (1015)
                      +.++|++|++.+.    .+++..+   .||||+|+.+|+.++|++|+++|++++.  .|..|.||||+|+ .+|+.++++
T Consensus       140 ~~eiv~~Ll~~gad~~~~~i~~~~---~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~  216 (376)
T 2aja_A          140 HLHVLNRLCELAPTEIMAMIQAEN---YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVIN  216 (376)
T ss_dssp             CHHHHHHHHHSCTTTHHHHHSHHH---HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred             CHHHHHHHHhCCCCccccccCCCC---CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHH
Confidence            5555555553321    1122211   4555555555555555555555555444  4445555555555 555555555


Q ss_pred             HHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccC----CCCC----Cc---------H---HHHH
Q psy14874        172 IFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARN----RVTE----AT---------P---LQLA  231 (1015)
Q Consensus       172 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~----~~~~----~t---------~---L~~A  231 (1015)
                      +|++.+.        .|.||+++|+.+|+.+++++|++.+.+.......    ...|    -+         .   +..+
T Consensus       217 ~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~  288 (376)
T 2aja_A          217 FLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRR  288 (376)
T ss_dssp             HHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHc
Confidence            5555321        1455555555555555555555543321110000    0000    00         0   0011


Q ss_pred             HHcCCHHHHHHHHHc---------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCC
Q psy14874        232 AEGGHANVVRVLVKA---------GASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQ  302 (1015)
Q Consensus       232 ~~~g~~~iv~~Ll~~---------ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~  302 (1015)
                      ...+..+.+++|++.         |++++    .+.+||++|++.|+.+++++|++.+   ...+..+.+++..|-..|.
T Consensus       289 ~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n----~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~  361 (376)
T 2aja_A          289 NDEVLLDDIRFLLSIPGIKALAPTATIPG----DANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYINETGGR  361 (376)
T ss_dssp             CCGGGHHHHHHHHTSTTTGGGSSCCSSTT----CCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC------------
T ss_pred             chhhHHHHHHHHHhChhhhhhhccCCCCC----CccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhcccccccccc
Confidence            112335666777653         44433    3557999999999999999999865   3455667788999988888


Q ss_pred             HHHHHHHHh
Q psy14874        303 ADTVRELLS  311 (1015)
Q Consensus       303 ~~~v~~Ll~  311 (1015)
                      .++.+.-+.
T Consensus       362 ~~~~~~~~~  370 (376)
T 2aja_A          362 LDLRAVALE  370 (376)
T ss_dssp             ---------
T ss_pred             ccHHHHHHH
Confidence            888776554

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.94  E-value=1.5e-26  Score=227.99  Aligned_cols=160  Identities=28%  Similarity=0.419  Sum_probs=148.3

Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy14874         17 QTSIGWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAA   95 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~   95 (1015)
                      .|+.|.||||.|++.|+.++|++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus         4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~   83 (165)
T 3twr_A            4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC   83 (165)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence            478899999999999999999999994 5677778889999999999999999999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh
Q psy14874         96 MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR  175 (1015)
Q Consensus        96 ~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~  175 (1015)
                      ..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||+|+|+. |+.+++++|++
T Consensus        84 ~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~  161 (165)
T 3twr_A           84 SYGHYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRG  161 (165)
T ss_dssp             HTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred             HcCcHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence            9999999999995 688899999999999999999999999999999999999999999999999877 89999999998


Q ss_pred             cCC
Q psy14874        176 AHP  178 (1015)
Q Consensus       176 ~~~  178 (1015)
                      +++
T Consensus       162 ~gA  164 (165)
T 3twr_A          162 DAA  164 (165)
T ss_dssp             C--
T ss_pred             ccc
Confidence            754

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.93  E-value=4.9e-26  Score=227.66  Aligned_cols=162  Identities=27%  Similarity=0.308  Sum_probs=151.6

Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874         18 TSIGWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM   96 (1015)
Q Consensus        18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~   96 (1015)
                      +..+.+|||.||+.|+.++|++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus         2 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   81 (179)
T 3f6q_A            2 SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAAS   81 (179)
T ss_dssp             -----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CHHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence            35688999999999999999999998 56899999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874         97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      .|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||+++|+..++.+++++|++.
T Consensus        82 ~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~  160 (179)
T 3f6q_A           82 HGHRDIVQKLLQ-YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKM  160 (179)
T ss_dssp             TTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            999999999995 5889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC
Q psy14874        177 HPSL  180 (1015)
Q Consensus       177 ~~~~  180 (1015)
                      +.+.
T Consensus       161 g~~~  164 (179)
T 3f6q_A          161 GQNL  164 (179)
T ss_dssp             TCCC
T ss_pred             hcCc
Confidence            8874

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.93  E-value=6.4e-26  Score=229.79  Aligned_cols=163  Identities=22%  Similarity=0.282  Sum_probs=153.5

Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHH
Q psy14874         47 VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLH  126 (1015)
Q Consensus        47 ~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~  126 (1015)
                      +|.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||
T Consensus        28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~  106 (192)
T 2rfm_A           28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLS-KGSNVNTKDFSGKTPLM  106 (192)
T ss_dssp             HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTSCCHHH
T ss_pred             HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHH
Confidence            45688999999999999999999999999999999999999999999999999999999995 57889999999999999


Q ss_pred             HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHH
Q psy14874        127 LAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEE  206 (1015)
Q Consensus       127 ~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~  206 (1015)
                      +|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||+++|+..|+.+++++
T Consensus       107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~v~~  185 (192)
T 2rfm_A          107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD-ISARDLTGLTAEASARIFGRQEVIKI  185 (192)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCcHHHHHH
Confidence            99999999999999999999999999999999999999999999999999877 67788999999999999999999999


Q ss_pred             HHhcC
Q psy14874        207 LMKFD  211 (1015)
Q Consensus       207 Ll~~~  211 (1015)
                      |++++
T Consensus       186 Ll~~~  190 (192)
T 2rfm_A          186 FTEVR  190 (192)
T ss_dssp             HHHHH
T ss_pred             HHhcc
Confidence            98743

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.93  E-value=7e-26  Score=225.01  Aligned_cols=168  Identities=24%  Similarity=0.315  Sum_probs=85.2

Q ss_pred             cHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHH
Q psy14874        373 NPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG  452 (1015)
Q Consensus       373 tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~  452 (1015)
                      +|||.|+..|+.++++.|++.+...++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus         4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~   83 (172)
T 3v30_A            4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD   83 (172)
T ss_dssp             CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred             hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH
Confidence            45555555555555555555554444444555555555555555555555555555555555544555555555444444


Q ss_pred             HHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHh
Q psy14874        453 IINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDA  532 (1015)
Q Consensus       453 ~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~  532 (1015)
                      ++++|+++|++++..                          |..|.||||+|+..|+.+++++|+++|+++         
T Consensus        84 ~v~~Ll~~g~~~~~~--------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---------  128 (172)
T 3v30_A           84 IVGLLLERDVDINIY--------------------------DWNGGTPLLYAVRGNHVKCVEALLARGADL---------  128 (172)
T ss_dssp             HHHHHHTTTCCTTCC--------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---------
T ss_pred             HHHHHHHcCCCCCCC--------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc---------
Confidence            444444444444322                          344444444444444444444444444444         


Q ss_pred             hhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q psy14874        533 LLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD  612 (1015)
Q Consensus       533 ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~  612 (1015)
                                                                +..+..|.||||+|+..|+.+++++|+++|+++..++.
T Consensus       129 ------------------------------------------~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~  166 (172)
T 3v30_A          129 ------------------------------------------TTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNL  166 (172)
T ss_dssp             ------------------------------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC--
T ss_pred             ------------------------------------------cccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccC
Confidence                                                      44455566666666666666666666666666666666


Q ss_pred             CCCCH
Q psy14874        613 QGQKP  617 (1015)
Q Consensus       613 ~g~t~  617 (1015)
                      .|.||
T Consensus       167 ~~~~p  171 (172)
T 3v30_A          167 VPADP  171 (172)
T ss_dssp             -----
T ss_pred             CCCCC
Confidence            65554

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.93  E-value=1.1e-25  Score=219.45  Aligned_cols=153  Identities=25%  Similarity=0.370  Sum_probs=144.0

Q ss_pred             CCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874         21 GWTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY   99 (1015)
Q Consensus        21 g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~   99 (1015)
                      |.||||.|++.|+.+++++|+++ +.+++..|..|.||||+ +..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   80 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF   80 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence            57999999999999999999998 34889899999999999 99999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874        100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus       100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      .+++++|++ .+.+++..+..|+||||+|+..|+.+++++|++. ++++..|..|.||||+|+..|+.+++++|+++
T Consensus        81 ~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A           81 LDTLKVLVE-HGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             HHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            999999995 6788999999999999999999999999999999 99999999999999999999999999999874

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.93  E-value=1.3e-25  Score=220.54  Aligned_cols=158  Identities=26%  Similarity=0.377  Sum_probs=144.5

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC
Q psy14874         53 EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG  132 (1015)
Q Consensus        53 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g  132 (1015)
                      ...||||.|+..|+.+++++|+++|++++.++..|.||||+|+. |+.+++++|++ .+.+++..+..|.||||+|+..|
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~   81 (162)
T 1ihb_A            4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLL-RGANPDLKDRTGFAVIHDAARAG   81 (162)
T ss_dssp             -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcC
Confidence            45699999999999999999999999999999999999999999 99999999995 58889999999999999999999


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCC
Q psy14874        133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDR  212 (1015)
Q Consensus       133 ~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~  212 (1015)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++++..+..+..|.||||+|+..|+.+++++|+++++
T Consensus        82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA  161 (162)
T 1ihb_A           82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA  161 (162)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred             CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999988667778888888888888877777777777554

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.93  E-value=1.1e-28  Score=256.72  Aligned_cols=191  Identities=23%  Similarity=0.200  Sum_probs=163.9

Q ss_pred             hccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy14874         14 LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL   93 (1015)
Q Consensus        14 ~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~   93 (1015)
                      .+..+.+|.||||.||+.|+.++|++|+++|+++|..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus        14 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~   93 (229)
T 2vge_A           14 ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHC   93 (229)
T ss_dssp             CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred             ccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            35667788899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHhccCccccccc-cCCCCHHHHH--HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHH
Q psy14874         94 AAMNGYADLCRFLVHDHAAVIDILT-LRKQTPLHLA--AEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA  170 (1015)
Q Consensus        94 A~~~g~~eiv~~Ll~~~~~~i~~~~-~~g~t~L~~A--a~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv  170 (1015)
                      |+..|+.+++++|+ +.+++++..+ ..|+||||+|  +..|+.+++++|++.|++++..|..+.+|++.++..+..   
T Consensus        94 A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~---  169 (229)
T 2vge_A           94 AASCNDTVICMALV-QHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGD---  169 (229)
T ss_dssp             HHHTTCHHHHHHHH-TTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTT---
T ss_pred             HHHcCCHHHHHHHH-HcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhcccc---
Confidence            99999999999999 4678888876 6999999999  899999999999999999999999888888865544433   


Q ss_pred             HHHhhcCCCC-cccCCCCCchHHHHHHHcCCHHHHHHHH
Q psy14874        171 QIFLRAHPSL-VTATTKDGNTCAHIAAMQGSVGVIEELM  208 (1015)
Q Consensus       171 ~~Ll~~~~~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll  208 (1015)
                      ++|++.+.+. +..+|.+|.||||+|+..|+.++++..+
T Consensus       170 ~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~  208 (229)
T 2vge_A          170 ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY  208 (229)
T ss_dssp             BCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred             ccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence            4666666542 4567888888888888888888776543

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.93  E-value=3.9e-28  Score=269.79  Aligned_cols=286  Identities=15%  Similarity=0.111  Sum_probs=193.4

Q ss_pred             hcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH-cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy14874         30 NRGHMELVNTMLNNHARVDVFDQEGRSALHLAAE-HGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH  108 (1015)
Q Consensus        30 ~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~-~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~  108 (1015)
                      ..+..+.+..+++.+.+++.  ..+.+++++|.. .++.+++++++++|++       ++||||+|+..|+.++|++|++
T Consensus        43 ~~~~~~~~~~~~~~~~~~~~--~~~ll~~~~a~~~~~~~~~~~~l~~~g~~-------~~T~Lh~Aa~~G~~e~v~~Ll~  113 (376)
T 2aja_A           43 TLSYKEAIHIFLPGTKNMEQ--VRQLLCLYYAHYNRNAKQLWSDAHKKGIK-------SEVICFVAAITGCSSALDTLCL  113 (376)
T ss_dssp             HSCHHHHHHHCCCCSSHHHH--HHHHHHHHHHHTTTTCTTHHHHHHHHTCC-------HHHHHHHHHHHCCHHHHHHHTT
T ss_pred             hccHHHHHHHHhcCCCCHHH--HHHHHHHHHHHhcCCCHHHHHHHHHcCCC-------cCCHHHHHHHcCCHHHHHHHHH
Confidence            35566777777776554432  234568888877 5889999999998864       4599999999999999999996


Q ss_pred             ccCcc--ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCccc
Q psy14874        109 DHAAV--IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI---DATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTA  183 (1015)
Q Consensus       109 ~~~~~--i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~---n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~  183 (1015)
                      .+...  .+..+..|.||||+|+.+|+.++|++|+++|+++   +..+.+ .||||+|+..|+.+++++|++++++. ..
T Consensus       114 ~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~  191 (376)
T 2aja_A          114 LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTE-AT  191 (376)
T ss_dssp             C--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGG-HH
T ss_pred             cCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCcc-ch
Confidence            54311  1234556789999999999999999999999862   333333 89999999999999999999998873 33


Q ss_pred             --CCCCCchHHHHHH-HcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Q psy14874        184 --TTKDGNTCAHIAA-MQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTA  260 (1015)
Q Consensus       184 --~~~~g~t~L~~A~-~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~  260 (1015)
                        .+..|.||||+|+ .+|+.+++++|++.+..          +.|||+.|+..|+.+++++|+++|++++..+.    +
T Consensus       192 ~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~----------~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~----~  257 (376)
T 2aja_A          192 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM----------LAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD----A  257 (376)
T ss_dssp             HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH----------HHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT----T
T ss_pred             hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc----------cchHHHHHHHCCCHHHHHHHHhcCcccccccH----H
Confidence              6778999999999 99999999999985422          56999999999999999999999987654432    2


Q ss_pred             HHHHHHcCC---------------------------HHHHHHHHhCCCccc-----cccccCCCHHHHHHHcCCHHHHHH
Q psy14874        261 VHLAAQNGH---------------------------NQVLEEMRSSKALNV-----YSKKLGVTALHVAAYFGQADTVRE  308 (1015)
Q Consensus       261 L~~A~~~~~---------------------------~~iv~~Ll~~~~~~~-----~~~~~~~t~l~~A~~~~~~~~v~~  308 (1015)
                      ++.|+.+|+                           .+.+++|++......     .....+.++++.|+..|+.++++.
T Consensus       258 l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~l  337 (376)
T 2aja_A          258 FKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACAL  337 (376)
T ss_dssp             TTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHH
T ss_pred             HHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHH
Confidence            333333333                           344555554322111     112234567888888888888888


Q ss_pred             HHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHH
Q psy14874        309 LLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLL  356 (1015)
Q Consensus       309 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll  356 (1015)
                      |++.+                ...+..++|++.+|-..|..++.+.-+
T Consensus       338 Ll~~~----------------~v~~~~~~~~~~~~~~~~~~~~~~~~~  369 (376)
T 2aja_A          338 LLSIP----------------SVLALTKANNYYINETGGRLDLRAVAL  369 (376)
T ss_dssp             HTTSH----------------HHHHSCC--------------------
T ss_pred             HHcCh----------------HHHHHHHHhccccccccccccHHHHHH
Confidence            87642                112345667777777777776665443

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.93  E-value=5.1e-25  Score=217.90  Aligned_cols=158  Identities=31%  Similarity=0.430  Sum_probs=147.4

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHH
Q psy14874         51 DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE  130 (1015)
Q Consensus        51 d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~  130 (1015)
                      ...+.++|+.|++.|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+.
T Consensus        11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~   89 (169)
T 2y1l_E           11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLK-NGADVNAVDHAGMTPLRLAAL   89 (169)
T ss_dssp             --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHH
Confidence            4456789999999999999999999999999999999999999999999999999995 578899999999999999999


Q ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhc
Q psy14874        131 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKF  210 (1015)
Q Consensus       131 ~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  210 (1015)
                      .|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||+++|+..|+.+++++|+++
T Consensus        90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~  168 (169)
T 2y1l_E           90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD-VNAQDKFGKTAFDISIDNGNEDLAEILQKL  168 (169)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred             cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence            9999999999999999999999999999999999999999999999887 577888899999999999999999988875

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.93  E-value=5.4e-25  Score=217.37  Aligned_cols=158  Identities=23%  Similarity=0.317  Sum_probs=147.9

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC
Q psy14874         53 EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG  132 (1015)
Q Consensus        53 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g  132 (1015)
                      .|.||||.|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~   80 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQ-NGADPQLLGKGRESALSLACSKG   80 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcC
Confidence            57899999999999999999999999999999999999999999999999999995 58889999999999999999999


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCC
Q psy14874        133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDR  212 (1015)
Q Consensus       133 ~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~  212 (1015)
                      +.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||+++|+..|+.+++++|+++..
T Consensus        81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~  159 (167)
T 3v31_A           81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQVIESHLL  159 (167)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998877 57788889999999999999999998887543

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.92  E-value=3.6e-26  Score=240.25  Aligned_cols=180  Identities=18%  Similarity=0.216  Sum_probs=129.0

Q ss_pred             CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q psy14874         19 SIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNG   98 (1015)
Q Consensus        19 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g   98 (1015)
                      ..|.||||.|++.|+.++++.|+++|++++. +..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus         3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g   81 (239)
T 1ycs_B            3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG   81 (239)
T ss_dssp             -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred             ccccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            5799999999999999999999999999984 578899999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-cHHHHH--HHcCChHHHHHHhh
Q psy14874         99 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQ-KPIHVA--AQNNFPEVAQIFLR  175 (1015)
Q Consensus        99 ~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~-t~L~~A--~~~g~~~iv~~Ll~  175 (1015)
                      +.+++++|++ .+++++..|..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|  +..|+.+++++|++
T Consensus        82 ~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~  160 (239)
T 1ycs_B           82 HTEIVKFLVQ-FGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG  160 (239)
T ss_dssp             CHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred             CHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence            9999999995 5889999999999999999999999999999999999999998887 999999  88899999999998


Q ss_pred             cCCCCcc--------cCCCCCchHHHHHHHcCC
Q psy14874        176 AHPSLVT--------ATTKDGNTCAHIAAMQGS  200 (1015)
Q Consensus       176 ~~~~~~~--------~~~~~g~t~L~~A~~~g~  200 (1015)
                      .+.+...        ..+..+.++.+.+...|.
T Consensus       161 ~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~  193 (239)
T 1ycs_B          161 VQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD  193 (239)
T ss_dssp             HHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred             hhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence            7665211        114445555555555543

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.92  E-value=1.9e-24  Score=209.86  Aligned_cols=151  Identities=27%  Similarity=0.327  Sum_probs=142.1

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCC
Q psy14874         54 GRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ  133 (1015)
Q Consensus        54 g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~  133 (1015)
                      ..+||+.|+..|+.+++++|+++|++++ .+..|.||||+|+..|+.+++++|+ +.+.+++..+..|+||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~   79 (153)
T 1awc_B            2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLL-RAGVSRDARTKVDRTPLHMAASEGH   79 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCh
Confidence            4689999999999999999999999887 5788999999999999999999999 5678899999999999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHH
Q psy14874        134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL  207 (1015)
Q Consensus       134 ~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~L  207 (1015)
                      .+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||+++|+..|+.+++++|
T Consensus        80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            9999999999999999999999999999999999999999999887 677888999999999999999999876

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.92  E-value=1.7e-27  Score=247.72  Aligned_cols=198  Identities=22%  Similarity=0.226  Sum_probs=136.4

Q ss_pred             HHHHHhcchh--hcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCc
Q psy14874        388 GLLLSRAADL--LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVD  465 (1015)
Q Consensus       388 ~~Ll~~~~~~--~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~  465 (1015)
                      +.|++++++.  .+..+..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus         2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n   81 (229)
T 2vge_A            2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN   81 (229)
T ss_dssp             --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence            3455555442  12334455667777777777777777777777777777777777777777777777777777777666


Q ss_pred             ccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccC-
Q psy14874        466 VTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKS-  544 (1015)
Q Consensus       466 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~-  544 (1015)
                      ..                          |..|.||||+|+..|+.+++++|+++|++++.                 ++ 
T Consensus        82 ~~--------------------------d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~-----------------~~~  118 (229)
T 2vge_A           82 SP--------------------------DSHGWTPLHCAASCNDTVICMALVQHGAAIFA-----------------TTL  118 (229)
T ss_dssp             CC--------------------------CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC-----------------CCS
T ss_pred             CC--------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-----------------ccC
Confidence            43                          56777777777777777777777777777632                 33 


Q ss_pred             CCCCcHHHHH--HHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHH
Q psy14874        545 RVGRTALHLA--AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS--IDATDDQGQKPIHV  620 (1015)
Q Consensus       545 ~~g~t~L~~A--~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~--~~~~d~~g~t~l~~  620 (1015)
                      ..|.||||+|  +..|+.+++++|++.+. +++..+..|.||++.++..+.   .++|++.|++  ++.+|..|+||||+
T Consensus       119 ~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga-~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~  194 (229)
T 2vge_A          119 SDGATAFEKCDPYREGYADCATYLADVEQ-SMGLMNSGAVYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWW  194 (229)
T ss_dssp             STTCCTGGGCCTTSTTHHHHHHHHHHHHH-HTTTSGGGEEEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEE
T ss_pred             CCCCCHHHHHHHHhcChHHHHHHHHHcCC-CcccccCCchHHHHHHhhccc---cccCccccccccccccCCCcccHHHH
Confidence            4677777777  77777777777776544 346666777777776554442   3677888888  67788889999999


Q ss_pred             HHhcCChHHHHH
Q psy14874        621 AAQNNFPEVAQI  632 (1015)
Q Consensus       621 A~~~~~~~~~~~  632 (1015)
                      |+.+|+.++|+.
T Consensus       195 A~~~g~~~~v~~  206 (229)
T 2vge_A          195 AALHGQEGYVPR  206 (229)
T ss_dssp             EEETTEEEEEEG
T ss_pred             HHHcCCcceeeh
Confidence            999998888764

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.92  E-value=1.6e-24  Score=216.62  Aligned_cols=166  Identities=23%  Similarity=0.364  Sum_probs=101.8

Q ss_pred             CCcHHHHHHHcCCHHHHHHHhhC-CCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHH
Q psy14874        405 GKTCLHIAATHGHLQMVEVLLGQ-GAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLL  483 (1015)
Q Consensus       405 g~t~L~~A~~~g~~~iv~~Ll~~-ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll  483 (1015)
                      +.++|+.|+..|+.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|+++|++++..                
T Consensus         5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----------------   68 (179)
T 3f6q_A            5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVM----------------   68 (179)
T ss_dssp             --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------
T ss_pred             HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCc----------------
Confidence            44555555555555555555555 4455555555555666655555566666666555555432                


Q ss_pred             HhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHH
Q psy14874        484 SRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLC  563 (1015)
Q Consensus       484 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v  563 (1015)
                                +..|.||||+|+..|+.+++++|+++|+++                 +.++..|.||||+|+..|+.+++
T Consensus        69 ----------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------~~~d~~g~t~L~~A~~~~~~~~v  121 (179)
T 3f6q_A           69 ----------NRGDDTPLHLAASHGHRDIVQKLLQYKADI-----------------NAVNEHGNVPLHYACFWGQDQVA  121 (179)
T ss_dssp             ----------CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             ----------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------CccCCCCCCHHHHHHHcCCHHHH
Confidence                      455666666666666666666666666655                 33445566666666666666666


Q ss_pred             HHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q psy14874        564 RFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG  614 (1015)
Q Consensus       564 ~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g  614 (1015)
                      ++|++.+ .+++..+..|.|||++|+..++.+++++|+++|++++..+..+
T Consensus       122 ~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~  171 (179)
T 3f6q_A          122 EDLVANG-ALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD  171 (179)
T ss_dssp             HHHHHTT-CCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred             HHHHHCC-CCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence            6666543 3346666677888888888888888888888888887665443

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.91  E-value=7.4e-25  Score=213.51  Aligned_cols=147  Identities=23%  Similarity=0.257  Sum_probs=120.2

Q ss_pred             hhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc-HH
Q psy14874         13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRT-AL   91 (1015)
Q Consensus        13 ~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t-~L   91 (1015)
                      ..+..+..|.||||.|++.|+.++|++|+++|++++..|..|+||||+|+ .|+.+++++|+++|++++.++..|.| ||
T Consensus         4 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL   82 (156)
T 1bi7_B            4 AAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPV   82 (156)
T ss_dssp             ------CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHH
T ss_pred             CccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence            45678899999999999999999999999999999999999999999995 99999999999999999999999999 99


Q ss_pred             HHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy14874         92 HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA  161 (1015)
Q Consensus        92 ~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A  161 (1015)
                      |+|+..|+.+++++|++ ++++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||.+.+
T Consensus        83 ~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~  151 (156)
T 1bi7_B           83 HDAAREGFLDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP  151 (156)
T ss_dssp             HHHHHHTCHHHHHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred             HHHHHCCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence            99999999999999995 5889999999999999999999999999999999999999999999987743

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.91  E-value=6.8e-24  Score=206.83  Aligned_cols=153  Identities=25%  Similarity=0.349  Sum_probs=142.4

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC
Q psy14874         54 GRSALHLAAEHGYLKVCDALLTH-KAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG  132 (1015)
Q Consensus        54 g~t~L~~A~~~g~~~iv~~Ll~~-ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g  132 (1015)
                      +.||||.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|++ .+.+++..+..|.||||+|+..|
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~   79 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLK-QGASPNVQDTSGTSPVHDAARTG   79 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcC
Confidence            46899999999999999999998 44899999999999999 99999999999995 58889999999999999999999


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhc
Q psy14874        133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKF  210 (1015)
Q Consensus       133 ~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  210 (1015)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. . ..+..+..|.||+++|+..|+.+++++|+++
T Consensus        80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~-~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A           80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S-DLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-S-CTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-c-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999998 4 4678889999999999999999999999863

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.91  E-value=1.3e-24  Score=206.23  Aligned_cols=132  Identities=23%  Similarity=0.300  Sum_probs=108.1

Q ss_pred             hhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-CCcHH
Q psy14874         13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRV-GRTAL   91 (1015)
Q Consensus        13 ~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~-g~t~L   91 (1015)
                      .+|.+|..|.||||.|++.|+.++|++|+++|++++..|..|+||||+|+. |+.+++++|+++|++++.++.. |.|||
T Consensus         4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L   82 (136)
T 1d9s_A            4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV   82 (136)
T ss_dssp             CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred             CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence            467788888888888888888888888888888888888888888888888 8888888888888888888877 78888


Q ss_pred             HHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q psy14874         92 HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS  146 (1015)
Q Consensus        92 ~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad  146 (1015)
                      |+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|||
T Consensus        83 ~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           83 HDAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             HHHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             HHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            88888888888888884 5677777777888888888888888888888887775

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.91  E-value=5.1e-24  Score=209.91  Aligned_cols=159  Identities=25%  Similarity=0.290  Sum_probs=142.0

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHH
Q psy14874         50 FDQEGRSALHLAAEHGYLKVCDALLT-HKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLA  128 (1015)
Q Consensus        50 ~d~~g~t~L~~A~~~g~~~iv~~Ll~-~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~A  128 (1015)
                      .|.+|.||||.|++.|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|
T Consensus         4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A   82 (165)
T 3twr_A            4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQ-HGADVHAKDKGGLVPLHNA   82 (165)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHH
T ss_pred             CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHh-cCCCCCccCCCCCCHHHHH
Confidence            46778899999999999999999998 556778888889999999999999999999995 5788999999999999999


Q ss_pred             HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHH
Q psy14874        129 AEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELM  208 (1015)
Q Consensus       129 a~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll  208 (1015)
                      +..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++.+ .+..+..|.||+++|+. |+.+++++|+
T Consensus        83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~a~~-~~~~i~~~L~  160 (165)
T 3twr_A           83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD-PTKKNRDGNTPLDLVKD-GDTDIQDLLR  160 (165)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTGGGSCT-TCHHHHHHHH
T ss_pred             HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCChhHhHhc-CChHHHHHHh
Confidence            999999999999999999999999999999999999999999999999876 67788888998888765 8888888887


Q ss_pred             hcC
Q psy14874        209 KFD  211 (1015)
Q Consensus       209 ~~~  211 (1015)
                      +.+
T Consensus       161 ~~g  163 (165)
T 3twr_A          161 GDA  163 (165)
T ss_dssp             TC-
T ss_pred             hcc
Confidence            644

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.90  E-value=3.8e-24  Score=213.89  Aligned_cols=154  Identities=15%  Similarity=0.134  Sum_probs=139.3

Q ss_pred             CCcHHHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCH----HHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy14874         21 GWTPLLIACNRGHMELVNTMLNNHARVDVFD-QEGRSALHLAAEHGYL----KVCDALLTHKAFINSKSRVGRTALHLAA   95 (1015)
Q Consensus        21 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~----~iv~~Ll~~ga~in~~~~~g~t~L~~A~   95 (1015)
                      ++++|+.|++.|+.+.++.+++.+.  +..+ ..|+||||+|+..|+.    +++++|+++|+++|.++..|+||||+|+
T Consensus         6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~   83 (186)
T 3t8k_A            6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF   83 (186)
T ss_dssp             HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred             cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence            6789999999999999999999764  3455 7799999999999985    5999999999999999999999999999


Q ss_pred             HcCC------HHHHHHHHhccCccccccccCCC-CHHHHHHHcC-----CHHHHHHHHH-CCCCCCCCCCCCCcHHHHHH
Q psy14874         96 MNGY------ADLCRFLVHDHAAVIDILTLRKQ-TPLHLAAEAG-----QLQVCKLLLD-LGASIDATDDQGQKPIHVAA  162 (1015)
Q Consensus        96 ~~g~------~eiv~~Ll~~~~~~i~~~~~~g~-t~L~~Aa~~g-----~~~ivk~Ll~-~gad~n~~d~~~~t~L~~A~  162 (1015)
                      ..|+      .+++++|++ .|+++|.+|..|+ ||||+|+..|     +.+++++|++ +|++++.+|..|.||||+|+
T Consensus        84 ~~~~~~~~~~~~iv~~Ll~-~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~  162 (186)
T 3t8k_A           84 QGGGNDITGTTELCKIFLE-KGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVK  162 (186)
T ss_dssp             HHCTTCHHHHHHHHHHHHH-TTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHH
T ss_pred             HcCCcchhhHHHHHHHHHH-CCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHH
Confidence            9987      678999994 6899999999999 9999999944     4679999999 99999999999999999999


Q ss_pred             HcCChHHHHHHhhcC
Q psy14874        163 QNNFPEVAQIFLRAH  177 (1015)
Q Consensus       163 ~~g~~~iv~~Ll~~~  177 (1015)
                      +.|+.+++++|.+..
T Consensus       163 ~~~~~~~v~~L~~~~  177 (186)
T 3t8k_A          163 RCQKPIALKMMEDYI  177 (186)
T ss_dssp             TTTCHHHHHHHHHHH
T ss_pred             HcCCHHHHHHHHHHH
Confidence            999999999998754

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.89  E-value=2.2e-23  Score=197.83  Aligned_cols=134  Identities=25%  Similarity=0.356  Sum_probs=127.8

Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccC-CC
Q psy14874         44 HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLR-KQ  122 (1015)
Q Consensus        44 g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~-g~  122 (1015)
                      +++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+. |+.+++++|++ .+.+++..+.. |.
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~-~g~~~~~~~~~~g~   79 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLL-HGAEPNCADPATLT   79 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHH-HTCCSSCCBTTTTB
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHH-CCCCCCCcCCCCCC
Confidence            46888999999999999999999999999999999999999999999999999 99999999995 67889999999 99


Q ss_pred             CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874        123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       123 t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~  179 (1015)
                      ||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++++
T Consensus        80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999999998753

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.89  E-value=3.6e-24  Score=224.89  Aligned_cols=160  Identities=20%  Similarity=0.247  Sum_probs=110.0

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHH
Q psy14874         51 DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE  130 (1015)
Q Consensus        51 d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~  130 (1015)
                      +..|.||||.|++.|+.++++.|+++|++++.. ..|.||||.|+..|+.+++++|+ +.+.+++..+..|.||||+|+.
T Consensus         2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~   79 (239)
T 1ycs_B            2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVC   79 (239)
T ss_dssp             ------------------------------------CHHHHHHHHHHTCHHHHHHHT-STTSSCCCCCTTSCCHHHHHHH
T ss_pred             CccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHH
Confidence            356899999999999999999999999999864 67899999999999999999999 5577899999999999999999


Q ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCc-hHHHHH--HHcCCHHHHHHH
Q psy14874        131 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGN-TCAHIA--AMQGSVGVIEEL  207 (1015)
Q Consensus       131 ~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~-t~L~~A--~~~g~~~iv~~L  207 (1015)
                      .|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|++++.+. +..+..|. ||+|+|  +..|+.+++++|
T Consensus        80 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~~~g~~~~~~~L  158 (239)
T 1ycs_B           80 AGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEMEEGYTQCSQFL  158 (239)
T ss_dssp             HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred             cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCCCCcchHHHHHHhhhccHHHHHHH
Confidence            99999999999999999999999999999999999999999999998874 55555554 888877  666777777777


Q ss_pred             HhcCCc
Q psy14874        208 MKFDRS  213 (1015)
Q Consensus       208 l~~~~~  213 (1015)
                      ++.+.+
T Consensus       159 l~~~a~  164 (239)
T 1ycs_B          159 YGVQEK  164 (239)
T ss_dssp             HHHHHH
T ss_pred             HHhhhc
Confidence            765444

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.89  E-value=1.1e-22  Score=190.20  Aligned_cols=126  Identities=44%  Similarity=0.655  Sum_probs=116.1

Q ss_pred             CCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874         20 IGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY   99 (1015)
Q Consensus        20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~   99 (1015)
                      +|+||||.|++.|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~   80 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q psy14874        100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS  146 (1015)
Q Consensus       100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad  146 (1015)
                      .+++++|++ .+.+++..+..|.|||++|+..|+.+++++|+++|||
T Consensus        81 ~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           81 LEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             HHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             HHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            999999994 5778888888999999999999999999999998886

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.88  E-value=1.3e-22  Score=192.49  Aligned_cols=127  Identities=28%  Similarity=0.377  Sum_probs=97.0

Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874         17 QTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM   96 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~   96 (1015)
                      ....|.||||.||+.|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus        10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~   89 (136)
T 2jab_A           10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF   89 (136)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence            34567788888888888888888888888888778888888888888888888888888888888777777777777777


Q ss_pred             cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCC
Q psy14874         97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG  144 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~g  144 (1015)
                      .|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|
T Consensus        90 ~~~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           90 IGHLEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             HTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             cCCHHHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            777777777774 46667777777777777777777777777777765

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.87  E-value=1.6e-22  Score=196.92  Aligned_cols=143  Identities=24%  Similarity=0.276  Sum_probs=120.1

Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCC-HHH
Q psy14874         48 DVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQT-PLH  126 (1015)
Q Consensus        48 ~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t-~L~  126 (1015)
                      +..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+ .|+.+++++|++ .+.+++..+..|.| |||
T Consensus         6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~-~g~~~~~~d~~g~ttpL~   83 (156)
T 1bi7_B            6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLL-HGAEPNCADPATLTRPVH   83 (156)
T ss_dssp             ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHT-TTCCCCCCCTTTCCCHHH
T ss_pred             cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHH-cCCCCCCcCCCCCcHHHH
Confidence            346788999999999999999999999999999999999999999986 999999999994 68899999999999 999


Q ss_pred             HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHH
Q psy14874        127 LAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAH  193 (1015)
Q Consensus       127 ~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~  193 (1015)
                      +|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++.+ .+..+..|.|+.+
T Consensus        84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~~~  149 (156)
T 1bi7_B           84 DAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG-TRGSNHARIDAAE  149 (156)
T ss_dssp             HHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred             HHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC-CCccCcCcCcccc
Confidence            99999999999999999999999999999999999999999999999999887 5777888888765

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.87  E-value=1e-21  Score=186.21  Aligned_cols=127  Identities=28%  Similarity=0.388  Sum_probs=119.0

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHH
Q psy14874         50 FDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA  129 (1015)
Q Consensus        50 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa  129 (1015)
                      ....+.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+
T Consensus        10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~   88 (136)
T 2jab_A           10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLK-NGADVNAVDAIGFTPLHLAA   88 (136)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHH
T ss_pred             ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHHHH
Confidence            35567899999999999999999999999999999999999999999999999999995 58889999999999999999


Q ss_pred             HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcC
Q psy14874        130 EAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH  177 (1015)
Q Consensus       130 ~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~  177 (1015)
                      ..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.|
T Consensus        89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            999999999999999999999999999999999999999999998864

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.86  E-value=3.6e-21  Score=179.78  Aligned_cols=126  Identities=44%  Similarity=0.672  Sum_probs=119.8

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC
Q psy14874         53 EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG  132 (1015)
Q Consensus        53 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g  132 (1015)
                      +|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~   79 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNG   79 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcC
Confidence            58999999999999999999999999999999999999999999999999999995 57888999999999999999999


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874        133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       133 ~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~  179 (1015)
                      +.+++++|+++|++++.+|..|.|||++|+..|+.+++++|++++++
T Consensus        80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999998763

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.86  E-value=6.3e-22  Score=197.78  Aligned_cols=154  Identities=15%  Similarity=0.150  Sum_probs=127.9

Q ss_pred             CccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCH----HHHHHHhhCCCCcccCCCCCCCHHHHHH
Q psy14874        371 GYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL----QMVEVLLGQGAEINATDKGGARSIHTAA  446 (1015)
Q Consensus       371 g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~----~iv~~Ll~~ga~i~~~~~~g~t~L~~A~  446 (1015)
                      ++++|+.|++.|+.+.++.++..+...  ..+..|+||||+|+..|+.    +++++|+++|+++|.+|..|.||||+|+
T Consensus         6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~   83 (186)
T 3t8k_A            6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF   83 (186)
T ss_dssp             HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred             cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence            457888888888888888888766442  2236789999999998875    5899999999999999999999999999


Q ss_pred             HhCC------HHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCC-cHHHHHHHcC-----CHHHHH
Q psy14874        447 RYGH------VGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGK-TCLHIAATHG-----HLQMVE  514 (1015)
Q Consensus       447 ~~g~------~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~-t~L~~A~~~g-----~~~~v~  514 (1015)
                      ..|+      .+++++|+++|++++..                          |..|. ||||+|+..+     +.++++
T Consensus        84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~--------------------------d~~g~ttpLh~A~~~~~~~~~~~~iv~  137 (186)
T 3t8k_A           84 QGGGNDITGTTELCKIFLEKGADITAL--------------------------YKPYKIVVFKNIFNYFVDENEMIPLYK  137 (186)
T ss_dssp             HHCTTCHHHHHHHHHHHHHTTCCSSSC--------------------------BGGGTBCTTGGGGGCCSCHHHHHHHHH
T ss_pred             HcCCcchhhHHHHHHHHHHCCCCCCcc--------------------------CCCcCchHHHHHHHcCCChhhHHHHHH
Confidence            9887      57899999999988865                          67888 9999999844     467999


Q ss_pred             HHHh-cCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhc
Q psy14874        515 VLLG-QGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHD  569 (1015)
Q Consensus       515 ~Ll~-~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  569 (1015)
                      +|++ +|+++                 +.++..|+||||+|+..|+.++|++|.+.
T Consensus       138 ~Ll~~~gad~-----------------~~~d~~G~TpL~~A~~~~~~~~v~~L~~~  176 (186)
T 3t8k_A          138 LIFSQSGLQL-----------------LIKDKWGLTALEFVKRCQKPIALKMMEDY  176 (186)
T ss_dssp             HHHTSTTCCT-----------------TCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred             HHHHhcCCCC-----------------cccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence            9999 89988                 55677888999999888888888888754

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.85  E-value=4.9e-22  Score=188.77  Aligned_cols=125  Identities=30%  Similarity=0.390  Sum_probs=67.1

Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874         17 QTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM   96 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~   96 (1015)
                      +|..|+||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus         6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~   85 (137)
T 3c5r_A            6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAK   85 (137)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHH
Confidence            45555556666655555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHH
Q psy14874         97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD  142 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~  142 (1015)
                      .|+.+++++|++ .+++++..+..|.|||++|+..+..+++++|.+
T Consensus        86 ~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~  130 (137)
T 3c5r_A           86 NGHVDIVKLLLS-YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK  130 (137)
T ss_dssp             TTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred             cCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence            555555555552 344444445555555555554444444444443

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.85  E-value=9e-22  Score=197.24  Aligned_cols=140  Identities=26%  Similarity=0.285  Sum_probs=115.6

Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHH
Q psy14874         18 TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS-RVGRTALHLAAM   96 (1015)
Q Consensus        18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~-~~g~t~L~~A~~   96 (1015)
                      ++.|+||||.|++.|+.+++++|++ |+++|..|..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+.
T Consensus        41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~  119 (183)
T 3deo_A           41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG  119 (183)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence            4678899999999999999999998 88888889999999999999999999999999999988887 778888888888


Q ss_pred             cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874         97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      .|+.+++++|++ .+++++..+..|+||||+|+..++.                 ..+.++|++|+..|+.+++++|.++
T Consensus       120 ~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~  181 (183)
T 3deo_A          120 YVRPEVVEALVE-LGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ  181 (183)
T ss_dssp             TTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCcHHHHHHHHH-cCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence            888888888884 4677888888888888888774432                 2346788888888888888887653

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.85  E-value=1.2e-22  Score=203.54  Aligned_cols=162  Identities=21%  Similarity=0.186  Sum_probs=134.9

Q ss_pred             HHhcCCHHHHHHHHhCCCCCC-----------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy14874         28 ACNRGHMELVNTMLNNHARVD-----------VFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAM   96 (1015)
Q Consensus        28 A~~~g~~~iv~~Ll~~g~~~~-----------~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~   96 (1015)
                      |++.|..+.+++|++.+....           ..+.+|.||||+|+..|+.+++++|++ |++++.++..|.||||+|+.
T Consensus         7 aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~   85 (183)
T 3deo_A            7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAG   85 (183)
T ss_dssp             EEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHH
T ss_pred             HHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHH
Confidence            344555556666664332211           124578999999999999999999999 99999999999999999999


Q ss_pred             cCCHHHHHHHHhccCccccccc-cCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh
Q psy14874         97 NGYADLCRFLVHDHAAVIDILT-LRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR  175 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~-~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~  175 (1015)
                      .|+.+++++|++ .+.+++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|++.++.        
T Consensus        86 ~~~~~~v~~Ll~-~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~--------  156 (183)
T 3deo_A           86 LGSDKCVRLLAE-AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT--------  156 (183)
T ss_dssp             HTCHHHHHHHHH-TTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT--------
T ss_pred             cCCHHHHHHHHH-cCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC--------
Confidence            999999999995 578888888 8899999999999999999999999999999999999999999875432        


Q ss_pred             cCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHh
Q psy14874        176 AHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMK  209 (1015)
Q Consensus       176 ~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~  209 (1015)
                                ..+.+++++|+..|+.++++.|.+
T Consensus       157 ----------~~~~~~l~~a~~~~~~~i~~~L~~  180 (183)
T 3deo_A          157 ----------TPKGNPMQFGRRIGLEKVINVLEG  180 (183)
T ss_dssp             ----------CCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred             ----------cccccHHHHHHHcCHHHHHHHHHH
Confidence                      345678888888888888888765

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.85  E-value=6.4e-22  Score=187.95  Aligned_cols=133  Identities=26%  Similarity=0.403  Sum_probs=119.8

Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCC
Q psy14874         44 HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQT  123 (1015)
Q Consensus        44 g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t  123 (1015)
                      |+++ .+|.+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+.+++..+..|.|
T Consensus         1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t   78 (137)
T 3c5r_A            1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQ-HKALVNTTGYQNDS   78 (137)
T ss_dssp             ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCGGGCC
T ss_pred             CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCcccCcCCCCCC
Confidence            5667 589999999999999999999999999999999999999999999999999999999995 68889999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCC
Q psy14874        124 PLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHP  178 (1015)
Q Consensus       124 ~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~  178 (1015)
                      |||+|+..|+.+++++|+++|++++.+|..|.||+++|+..+..+++++|.+...
T Consensus        79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~  133 (137)
T 3c5r_A           79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES  133 (137)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence            9999999999999999999999999999999999999999999998887766543

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.85  E-value=8.4e-23  Score=214.90  Aligned_cols=168  Identities=25%  Similarity=0.211  Sum_probs=114.5

Q ss_pred             CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q psy14874         19 SIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNG   98 (1015)
Q Consensus        19 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g   98 (1015)
                      ..|.+++..|+..|+.+.+..+...+.++   +.+|.||||+|+..|+.+++++|++ |+++|.++..|.||||+|+..|
T Consensus        13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g   88 (244)
T 3ui2_A           13 GEGAMEYLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLG   88 (244)
T ss_dssp             TTTEEEEEEEESSCCCCEEEEGGGSCHHH---HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHT
T ss_pred             CCCccHHHHHHHcCCCccccccccccccc---ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCC
Confidence            44556666666666666555554444333   2456777777777777777777777 7777777777777777777777


Q ss_pred             CHHHHHHHHhccCccccccc-cCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcC
Q psy14874         99 YADLCRFLVHDHAAVIDILT-LRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH  177 (1015)
Q Consensus        99 ~~eiv~~Ll~~~~~~i~~~~-~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~  177 (1015)
                      +.++|++|++ .+++++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+.           
T Consensus        89 ~~~~v~~Ll~-~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------  156 (244)
T 3ui2_A           89 SDKCVRLLAE-AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK-----------  156 (244)
T ss_dssp             CHHHHHHHHH-TTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------
T ss_pred             CHHHHHHHHH-cCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------
Confidence            7777777773 466666666 667777777777777777777777777777777777777777775221           


Q ss_pred             CCCcccCCCCCchHHHHHHHcCCHHHHHHHHh
Q psy14874        178 PSLVTATTKDGNTCAHIAAMQGSVGVIEELMK  209 (1015)
Q Consensus       178 ~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~  209 (1015)
                             ...+.+|+++|+..|+.++++.|.+
T Consensus       157 -------~~~~~~~l~~a~~~g~~~iv~~L~~  181 (244)
T 3ui2_A          157 -------TTPKGNPMQFGRRIGLEKVINVLEG  181 (244)
T ss_dssp             -------TCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             -------ccCCCCHHHHHHHcChHHHHHHHHH
Confidence                   1345566666666666666666665

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.85  E-value=1.4e-21  Score=205.64  Aligned_cols=141  Identities=26%  Similarity=0.282  Sum_probs=130.8

Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHH
Q psy14874         18 TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS-RVGRTALHLAAM   96 (1015)
Q Consensus        18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~-~~g~t~L~~A~~   96 (1015)
                      ++.|.||||.||+.|+.++|++|++ |+++|..|..|+||||+|+..|+.++|++|+++|++++.++ ..|.||||+|+.
T Consensus        42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~  120 (244)
T 3ui2_A           42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG  120 (244)
T ss_dssp             HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence            4679999999999999999999999 99999999999999999999999999999999999999988 889999999999


Q ss_pred             cCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874         97 NGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus        97 ~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      .|+.+++++|++ .+++++..+..|.||||+|+..++                 ...+.|||++|+..|+.+++++|.++
T Consensus       121 ~g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~  182 (244)
T 3ui2_A          121 YVRPEVVEALVE-LGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQ  182 (244)
T ss_dssp             TTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHh
Confidence            999999999995 588999999999999999997332                 24578999999999999999999985


Q ss_pred             C
Q psy14874        177 H  177 (1015)
Q Consensus       177 ~  177 (1015)
                      .
T Consensus       183 ~  183 (244)
T 3ui2_A          183 V  183 (244)
T ss_dssp             H
T ss_pred             c
Confidence            3

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.85  E-value=7.4e-22  Score=204.86  Aligned_cols=141  Identities=26%  Similarity=0.379  Sum_probs=114.8

Q ss_pred             hhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHH
Q psy14874         13 ALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTH-KAFINSKSRVGRTAL   91 (1015)
Q Consensus        13 ~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~in~~~~~g~t~L   91 (1015)
                      .++.++..|.||||.||+.|+.++|++|+++|++++..|..|+||||+|+..|+.+++++|+++ |++++.++..|.|||
T Consensus        65 ~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL  144 (222)
T 3ehr_A           65 YVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTAL  144 (222)
T ss_dssp             HHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHH
T ss_pred             hccccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHH
Confidence            4566778899999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q psy14874         92 HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG  154 (1015)
Q Consensus        92 ~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~  154 (1015)
                      |+|+..|+.+++++|++ .+++++..+..|.|||++|+..|+.++++.|++.|++.+..+.++
T Consensus       145 ~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~  206 (222)
T 3ehr_A          145 HAAAWKGYADIVQLLLA-KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED  206 (222)
T ss_dssp             HHHHHHTCHHHHHHHHH-HTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred             HHHHHcCCHHHHHHHHH-cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence            99999999999999995 488889999999999999999999999999999998877665543

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.84  E-value=4.4e-21  Score=178.29  Aligned_cols=111  Identities=23%  Similarity=0.244  Sum_probs=78.2

Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy14874         18 TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN   97 (1015)
Q Consensus        18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~   97 (1015)
                      ++.|.||||.|++.|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~   83 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE   83 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence            46677777777777777777777777777777777777777777777777777777777777777776677777666666


Q ss_pred             CCHHHHHHHHhccCccccccccCCCCHHHHHH
Q psy14874         98 GYADLCRFLVHDHAAVIDILTLRKQTPLHLAA  129 (1015)
Q Consensus        98 g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa  129 (1015)
                      |+.+++++|++ .+++++..+..|.||||+|+
T Consensus        84 ~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~  114 (123)
T 3aaa_C           84 GHVSCVKLLLS-KGADKTVKGPDGLTAFEATD  114 (123)
T ss_dssp             TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCC
T ss_pred             CCHHHHHHHHH-cCCCCCCcCCCCCCHHHHhC
Confidence            66666666663 35556666666666666663

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.83  E-value=7e-21  Score=206.13  Aligned_cols=139  Identities=19%  Similarity=0.165  Sum_probs=97.6

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCC------CCCCCCcHHHHHHHc---CCHHHHHHHHhccCccccccccCCCCH
Q psy14874         54 GRSALHLAAEHGYLKVCDALLTHKAFINS------KSRVGRTALHLAAMN---GYADLCRFLVHDHAAVIDILTLRKQTP  124 (1015)
Q Consensus        54 g~t~L~~A~~~g~~~iv~~Ll~~ga~in~------~~~~g~t~L~~A~~~---g~~eiv~~Ll~~~~~~i~~~~~~g~t~  124 (1015)
                      ..++|+.|+..|+.+.++.|++.|++++.      .+..|.||||+|+..   |+.+++++|++ .+++++..|..|+||
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~-~gadvn~~d~~G~Tp  229 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ-NGGHLDAKAADGNTA  229 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHH-HSSCTTCCCTTCCCH
T ss_pred             hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHh-cCCCCCCCCCCCCCH
Confidence            34567777777777777777777777776      466777777777776   67777777774 466777777777777


Q ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCC
Q psy14874        125 LHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGS  200 (1015)
Q Consensus       125 L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~  200 (1015)
                      ||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++.+       .|.||||+|+..|+
T Consensus       230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~  298 (301)
T 2b0o_E          230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVI  298 (301)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-------
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCC
Confidence            7777777777777777777777777777777777777777777777777776553       46677777777665

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.82  E-value=2.2e-20  Score=173.52  Aligned_cols=115  Identities=23%  Similarity=0.278  Sum_probs=105.9

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHH
Q psy14874         51 DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE  130 (1015)
Q Consensus        51 d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~  130 (1015)
                      +..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+ +.+.+++..+..|+||||+|+.
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~tpL~~A~~   82 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL-LKGADINAPDKHHITPLLSAVY   82 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999 5688899999999999999999


Q ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874        131 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNF  166 (1015)
Q Consensus       131 ~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~  166 (1015)
                      .|+.+++++|+++|++++.+|..|.||+|+|...+.
T Consensus        83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~  118 (123)
T 3aaa_C           83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAI  118 (123)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHH
T ss_pred             cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHH
Confidence            999999999999999999999999999999954333

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.80  E-value=3.2e-20  Score=192.47  Aligned_cols=163  Identities=21%  Similarity=0.205  Sum_probs=131.9

Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhCCC---------------CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy14874         17 QTSIGWTPLLIACNRGHMELVNTMLNNHA---------------RVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFIN   81 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~---------------~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in   81 (1015)
                      .+..++++.+++++.|+...+..+.+.+.               -++..+.+|.||||+|+..|+.+++++|++.|++++
T Consensus        21 ~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~  100 (222)
T 3ehr_A           21 YTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVN  100 (222)
T ss_dssp             SCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred             CCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCCCCcc
Confidence            34556666666666666543322221110               011235567899999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy14874         82 SKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA  161 (1015)
Q Consensus        82 ~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A  161 (1015)
                      .++..|.||||+|+..|+.++|++|++..+.+++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus       101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A  180 (222)
T 3ehr_A          101 GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMA  180 (222)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHC
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHh
Confidence            99999999999999999999999999766899999999999999999999999999999999999999999999999999


Q ss_pred             HHcCChHHHHHHhhcCCC
Q psy14874        162 AQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       162 ~~~g~~~iv~~Ll~~~~~  179 (1015)
                      +..|+.++++.|++.+..
T Consensus       181 ~~~~~~~~l~~l~~~~~~  198 (222)
T 3ehr_A          181 TNAACASLLKKKQGTDAV  198 (222)
T ss_dssp             CSHHHHHHHC--------
T ss_pred             cchhHHHHHHHHhccchh
Confidence            999999999999987765

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.80  E-value=1.1e-19  Score=196.68  Aligned_cols=140  Identities=21%  Similarity=0.205  Sum_probs=116.4

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhccCccccc------cccCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCcH
Q psy14874         87 GRTALHLAAMNGYADLCRFLVHDHAAVIDI------LTLRKQTPLHLAAEA---GQLQVCKLLLDLGASIDATDDQGQKP  157 (1015)
Q Consensus        87 g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~------~~~~g~t~L~~Aa~~---g~~~ivk~Ll~~gad~n~~d~~~~t~  157 (1015)
                      +.++|+.|+..|+.+.++.|+ ..+.+++.      .+..|.||||+|+..   |+.+++++|+++|+++|.+|..|.||
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp  229 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA  229 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred             hHHHHhhhhhccCHHHHHHHH-hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence            457899999999999999998 45667776      588899999999987   88999999999999999999999999


Q ss_pred             HHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCH
Q psy14874        158 IHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHA  237 (1015)
Q Consensus       158 L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~  237 (1015)
                      ||+|+..|+.+++++|++++++ ++..|.+|.|||++|+..|+.+++++|++.+.+         .+.||||+|++.|+.
T Consensus       230 Lh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------~g~tpLh~A~~~g~~  299 (301)
T 2b0o_E          230 LHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG---------TFAFPLHVDYSWVIS  299 (301)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------TTSSCCC--------
T ss_pred             HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------CCCChhHHHHhcCCc
Confidence            9999999999999999998877 678889999999999999999999999987665         367999999988864

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.78  E-value=7.6e-19  Score=153.86  Aligned_cols=90  Identities=43%  Similarity=0.657  Sum_probs=78.2

Q ss_pred             CCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874         20 IGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY   99 (1015)
Q Consensus        20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~   99 (1015)
                      +|+||||+|++.|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~   80 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence            48899999999999999999999999998888899999999999999999999999999888888888888888888888


Q ss_pred             HHHHHHHHhc
Q psy14874        100 ADLCRFLVHD  109 (1015)
Q Consensus       100 ~eiv~~Ll~~  109 (1015)
                      .+++++|++.
T Consensus        81 ~~~~~~Ll~~   90 (93)
T 1n0q_A           81 LEVVKLLLEA   90 (93)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHc
Confidence            8888888853

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.78  E-value=6.3e-19  Score=194.85  Aligned_cols=123  Identities=23%  Similarity=0.285  Sum_probs=65.4

Q ss_pred             CCcHHHHHHhc-CCHHHHHHHHhCCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy14874         21 GWTPLLIACNR-GHMELVNTMLNNHARVDVFD--QEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMN   97 (1015)
Q Consensus        21 g~t~L~~A~~~-g~~~iv~~Ll~~g~~~~~~d--~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~   97 (1015)
                      +.|+||.|+.. |++++|++|+++|+++|..+  ..|.||||+|+..|+.++|++|+++|+++|..|..|.||||+|+..
T Consensus       199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~  278 (368)
T 3jue_A          199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL  278 (368)
T ss_dssp             HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            34455555555 55555555555555555544  4555555555555555555555555555555555555555555555


Q ss_pred             CCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCC
Q psy14874         98 GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG  144 (1015)
Q Consensus        98 g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~g  144 (1015)
                      |+.+++++|++ ++++++..|..|.||||+|+..|+.+++++|++.|
T Consensus       279 g~~~~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~  324 (368)
T 3jue_A          279 GHTGLACLFLK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAK  324 (368)
T ss_dssp             TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            55555555552 34445555555555555555555555555555443

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.77  E-value=8e-18  Score=179.93  Aligned_cols=162  Identities=22%  Similarity=0.225  Sum_probs=95.1

Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCC--CCC-----------------------------CCCcHHHHHHHcC
Q psy14874         17 QTSIGWTPLLIACNRGHMELVNTMLNNHARVDV--FDQ-----------------------------EGRSALHLAAEHG   65 (1015)
Q Consensus        17 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~--~d~-----------------------------~g~t~L~~A~~~g   65 (1015)
                      .|.-+.++|+.+...|+....+++...-.....  .+.                             ...++|+.|+..|
T Consensus        62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~  141 (278)
T 1dcq_A           62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR  141 (278)
T ss_dssp             TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred             cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence            577888999999999998877776543211110  000                             0123556666666


Q ss_pred             CHHHHHHHHhCCCCC------CCCCCCCCcHHHHHHHc---CCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHH
Q psy14874         66 YLKVCDALLTHKAFI------NSKSRVGRTALHLAAMN---GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQV  136 (1015)
Q Consensus        66 ~~~iv~~Ll~~ga~i------n~~~~~g~t~L~~A~~~---g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~i  136 (1015)
                      +.+.++.+++.|+++      +..+..|.||||+|+..   |+.+++++|++ .++++|..|..|+||||+|+..|+.++
T Consensus       142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~-~ga~in~~d~~g~TpLh~A~~~g~~~~  220 (278)
T 1dcq_A          142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ-NSGNLDKQTGKGSTALHYCCLTDNAEC  220 (278)
T ss_dssp             CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH-HCSCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHH-CCCCccccCCCCCCHHHHHHHcCCHHH
Confidence            666666666666552      23345566666666665   55666666663 355555566666666666666666666


Q ss_pred             HHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874        137 CKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       137 vk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~  179 (1015)
                      +++|+++|++++.+|..|.||||+|+..|+.+++++|+++++.
T Consensus       221 v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~  263 (278)
T 1dcq_A          221 LKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG  263 (278)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             HHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            6666666666666666666666666666666666666655443

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.76  E-value=2.3e-18  Score=184.11  Aligned_cols=125  Identities=21%  Similarity=0.240  Sum_probs=118.1

Q ss_pred             CcHHHHHHhcCCHHHHHHHHhCCCCCC------CCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy14874         22 WTPLLIACNRGHMELVNTMLNNHARVD------VFDQEGRSALHLAAEH---GYLKVCDALLTHKAFINSKSRVGRTALH   92 (1015)
Q Consensus        22 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~------~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~in~~~~~g~t~L~   92 (1015)
                      .++|+.|++.|+.+.++.+++.|++++      ..|..|+||||+|+..   |+.+++++|+++|+++|.+|..|.||||
T Consensus       131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh  210 (278)
T 1dcq_A          131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH  210 (278)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred             hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence            468999999999999999999999854      4488999999999999   8999999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q psy14874         93 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI  147 (1015)
Q Consensus        93 ~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~  147 (1015)
                      +|+..|+.++|++|++ ++++++..|..|.||||+|+..|+.+++++|+++|++.
T Consensus       211 ~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~  264 (278)
T 1dcq_A          211 YCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR  264 (278)
T ss_dssp             HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             HHHHcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            9999999999999995 78999999999999999999999999999999999864

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.76  E-value=1.2e-18  Score=159.55  Aligned_cols=108  Identities=31%  Similarity=0.421  Sum_probs=89.0

Q ss_pred             cCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy14874         16 KQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAA   95 (1015)
Q Consensus        16 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~   95 (1015)
                      .+|.+|+||||.||..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~   83 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK   83 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence            36788888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HcCCHHHHHHHHhccCccccccccCCCCH
Q psy14874         96 MNGYADLCRFLVHDHAAVIDILTLRKQTP  124 (1015)
Q Consensus        96 ~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~  124 (1015)
                      ..|+.+++++|+ +.++++|..+..|.+|
T Consensus        84 ~~~~~~~~~~Ll-~~ga~~n~~~~~~~~~  111 (115)
T 2l6b_A           84 KNGHHEIVKLLD-AKGADVNARSWGSSHH  111 (115)
T ss_dssp             TTTCHHHHHHHH-TTSSSHHHHSCCCC--
T ss_pred             HCCCHHHHHHHH-HcCCCCCcCCcccccc
Confidence            888888888888 4577777777777766

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.76  E-value=3.7e-18  Score=149.47  Aligned_cols=93  Identities=46%  Similarity=0.668  Sum_probs=79.0

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcC
Q psy14874         53 EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAG  132 (1015)
Q Consensus        53 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g  132 (1015)
                      +|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+++++..+..|+||||+|+..|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~   79 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNG   79 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcC
Confidence            47889999999999999999999999888888888888888888888888888884 57778888888888888888888


Q ss_pred             CHHHHHHHHHCCCC
Q psy14874        133 QLQVCKLLLDLGAS  146 (1015)
Q Consensus       133 ~~~ivk~Ll~~gad  146 (1015)
                      +.+++++|+++||+
T Consensus        80 ~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           80 HLEVVKLLLEAGAY   93 (93)
T ss_dssp             CHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHcCCC
Confidence            88888888888875

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.75  E-value=4.6e-18  Score=187.92  Aligned_cols=128  Identities=23%  Similarity=0.302  Sum_probs=118.7

Q ss_pred             CCCCCcHHHHHHHc-CCHHHHHHHHhCCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHH
Q psy14874         51 DQEGRSALHLAAEH-GYLKVCDALLTHKAFINSKS--RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHL  127 (1015)
Q Consensus        51 d~~g~t~L~~A~~~-g~~~iv~~Ll~~ga~in~~~--~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~  127 (1015)
                      +..+.|+||.|+.. |+.++++.|+++|+++|..+  ..|.||||+|+..|+.+++++|++ +++++|..+..|+||||+
T Consensus       196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~-~Gadvn~~d~~G~TpLh~  274 (368)
T 3jue_A          196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQ-NGANVNQADSAGRGPLHH  274 (368)
T ss_dssp             -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHH
T ss_pred             cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCCCCCCCCHHHH
Confidence            44556899999999 99999999999999999988  889999999999999999999995 588999999999999999


Q ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874        128 AAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       128 Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~  179 (1015)
                      |+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.+..
T Consensus       275 A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~  326 (368)
T 3jue_A          275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR  326 (368)
T ss_dssp             HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred             HHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999999999999987543

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.72  E-value=4.5e-18  Score=155.72  Aligned_cols=108  Identities=32%  Similarity=0.444  Sum_probs=100.3

Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHH
Q psy14874         49 VFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLA  128 (1015)
Q Consensus        49 ~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~A  128 (1015)
                      .+|.+|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~d~~g~tpl~~A   82 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLA-KGADVNARSKDGNTPEHLA   82 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTT-TTCCTTCCCTTCCCTTHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHH
Confidence            368899999999999999999999999999999999999999999999999999999994 5888999999999999999


Q ss_pred             HHcCCHHHHHHHHHCCCCCCCCCCCCCcH
Q psy14874        129 AEAGQLQVCKLLLDLGASIDATDDQGQKP  157 (1015)
Q Consensus       129 a~~g~~~ivk~Ll~~gad~n~~d~~~~t~  157 (1015)
                      +..|+.+++++|+++|+++|.++..+.+|
T Consensus        83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~  111 (115)
T 2l6b_A           83 KKNGHHEIVKLLDAKGADVNARSWGSSHH  111 (115)
T ss_dssp             HTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred             HHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence            99999999999999999999999888876

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.69  E-value=7e-17  Score=146.20  Aligned_cols=97  Identities=31%  Similarity=0.384  Sum_probs=84.7

Q ss_pred             hhHhhccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q psy14874         10 ISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRT   89 (1015)
Q Consensus        10 ~~~~~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t   89 (1015)
                      .....+..|++|.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus        13 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t   92 (110)
T 2zgd_A           13 LVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKT   92 (110)
T ss_dssp             ---------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCc
Confidence            34456788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHH
Q psy14874         90 ALHLAAMNGYADLCRFL  106 (1015)
Q Consensus        90 ~L~~A~~~g~~eiv~~L  106 (1015)
                      |||+|+..|+.+++++|
T Consensus        93 pl~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           93 AFDISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHHHHHTCHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHh
Confidence            99999999999999986

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.58  E-value=4.7e-15  Score=134.09  Aligned_cols=91  Identities=23%  Similarity=0.306  Sum_probs=64.6

Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHH
Q psy14874         49 VFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLA  128 (1015)
Q Consensus        49 ~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~A  128 (1015)
                      ..|.+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .+++++..+..|.||||+|
T Consensus        19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A   97 (110)
T 2zgd_A           19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLE-AGADVXAQDKFGKTAFDIS   97 (110)
T ss_dssp             ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHH
T ss_pred             ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccccCCCcHHHHH
Confidence            356777788888888888888888888777777777777777777777777777777774 3566666666777777777


Q ss_pred             HHcCCHHHHHHH
Q psy14874        129 AEAGQLQVCKLL  140 (1015)
Q Consensus       129 a~~g~~~ivk~L  140 (1015)
                      +..|+.+++++|
T Consensus        98 ~~~~~~~~~~~L  109 (110)
T 2zgd_A           98 IDNGNEDLAEIL  109 (110)
T ss_dssp             HHHTCHHHHHHH
T ss_pred             HHcCCHHHHHHh
Confidence            777777776665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	1015
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-61
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-55
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-53
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	7e-48
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-38
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	7e-41
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-34
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-32
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-28
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-28
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	9e-27
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	8e-26
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-23
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-19
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-11
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	0.004
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-35
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-35
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-32
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-30
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	9e-30
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	5e-29
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	4e-18
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-14
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	0.001
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-30
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-28
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-24
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-22
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-22
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-10
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-29
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	9e-22
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	7e-21
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-20
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	6e-20
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-16
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	9e-10
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	9e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-27
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	5e-20
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	7e-20
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-18
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	7e-17
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	3e-08
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-05
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	8e-26
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-22
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	4e-20
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-17
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	5e-15
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-14
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	9e-14
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	4e-06
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-25
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-24
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-23
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-23
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-20
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	9e-19
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-16
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-12
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-20
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	8e-19
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	4e-18
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-17
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-16
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-10
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-09
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	7e-06
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	8e-20
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-16
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-16
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-13
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-13
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	7e-10
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-09
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-08
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	9e-07
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	3e-18
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	5e-16
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	3e-13
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-13
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	5e-13
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-12
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-12
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-15
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	9e-14
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-13
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-13
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-12
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-12
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	4e-12
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-07
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-05
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-10
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-09
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	6e-09
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	7e-09
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	3e-08
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	5e-07
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-05
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-05
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	9e-05
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	9e-10
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-09
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-09
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-09
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	4e-08
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-07
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	1e-06
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-06
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-06
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	4e-06
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-05
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-05
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	4e-09
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	5e-09
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	5e-09
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-08
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	7e-08
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-06
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-06
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-04
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	2e-08
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	2e-08
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	2e-07
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	5e-07
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	1e-06
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-06
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	9e-04
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	0.001
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	4e-08
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	4e-08
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	7e-07
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	8e-07
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	9e-07
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	4e-06
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	3e-05
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	5e-05
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	5e-05
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	6e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	7e-07
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	8e-07
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	9e-07
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	1e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	5e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	2e-04
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	5e-04
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	0.003
d1p7ba2	116	f.14.1.1 (A:36-151) Inward rectifier potassium cha	4e-05
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	5e-04

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  212 bits (540), Expect = 3e-61
 Identities = 124/417 (29%), Positives = 202/417 (48%), Gaps = 24/417 (5%)

Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINS 82
           TPL +A   GH+ +V  +L   A  +V + +  + LH+AA  G+ +V   LL +KA +N+
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 83  KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 142
           K++  +T LH AA  G+ ++ + L+ ++ A  ++ T    TPLH+AA  G ++    LL+
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLL-ENNANPNLATTAGHTPLHIAAREGHVETVLALLE 120

Query: 143 LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVG 202
             AS      +G  P+HVAA+     VA++ L    +   A  K+G T  H+A    ++ 
Sbjct: 121 KEASQACMTKKGFTPLHVAAKYGKVRVAELLLE-RDAHPNAAGKNGLTPLHVAVHHNNLD 179

Query: 203 VIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVH 262
           +++ L+   R G   +       TPL +AA+     V R L++ G S   E+  G T +H
Sbjct: 180 IVKLLL--PRGGSPHSPAW-NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLH 236

Query: 263 LAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPP 322
           LAAQ GH +++  + S +A      K G+T LH+ A  G       L+ H          
Sbjct: 237 LAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH---------- 286

Query: 323 TGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGG 382
            G     +  +  G TPLH+A++ GN  +V+               + GY+PLH A   G
Sbjct: 287 -GVMV--DATTRMGYTPLHVASHYGNIKLVK--FLLQHQADVNAKTKLGYSPLHQAAQQG 341

Query: 383 HVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL---LGQGAEINATDK 436
           H  +V LLL   A        +G T L IA   G++ + +VL     + + +  +DK
Sbjct: 342 HTDIVTLLLKNGAS-PNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDK 397

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (496), Expect = 3e-55
 Identities = 121/453 (26%), Positives = 188/453 (41%), Gaps = 71/453 (15%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA-LNV 284
           TPL +A+  GH  +V+ L++ GAS    N    T +H+AA+ GH +V + +  +KA +N 
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 285 YSKKLGVTALHVAAYFGQADTVRELLSHVP--------------------GTVKSDPPTG 324
            +K    T LH AA  G  + V+ LL +                                
Sbjct: 62  KAKD-DQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 120

Query: 325 ASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHV 384
                   ++ G TPLH+AA  G   V  LLL       +A   +NG  PLH+A    ++
Sbjct: 121 KEASQACMTKKGFTPLHVAAKYGKVRVAELLL-ERDAHPNAAG-KNGLTPLHVAVHHNNL 178

Query: 385 TVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHT 444
            +V LLL R      S   NG T LHIAA    +++   LL  G   NA    G   +H 
Sbjct: 179 DIVKLLLPRGGSP-HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHL 237

Query: 445 AARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIA 504
           AA+ GH  ++  LL K    ++                           +K+G T LH+ 
Sbjct: 238 AAQEGHAEMVALLLSKQANGNLG--------------------------NKSGLTPLHLV 271

Query: 505 ATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCR 564
           A  GH+ + +VL+  G  ++AT ++                   T LH+A+  G   L +
Sbjct: 272 AQEGHVPVADVLIKHGVMVDATTRMG-----------------YTPLHVASHYGNIKLVK 314

Query: 565 FLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQN 624
           F +  H A ++  T    +PLH AA+ G   +  LLL  GAS +     G  P+ +A + 
Sbjct: 315 F-LLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL 373

Query: 625 NFPEVAQI--FLRAHPSLVTATTKEKERAKDLI 655
            +  V  +   +    S V  + K +    + +
Sbjct: 374 GYISVTDVLKVVTDETSFVLVSDKHRMSFPETV 406

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (483), Expect = 2e-53
 Identities = 113/396 (28%), Positives = 185/396 (46%), Gaps = 22/396 (5%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
            N       TPL +A   GH E+   +L N A+V+   ++ ++ LH AA  G+  +   L
Sbjct: 26  PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLL 85

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           L + A  N  +  G T     A           + +  A    +T +  TPLH+AA+ G+
Sbjct: 86  LENNANPNLATTAGHTP-LHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGK 144

Query: 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAH 193
           ++V +LLL+  A  +A    G  P+HVA  +N  ++ +  L        +   +G T  H
Sbjct: 145 VRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVK-LLLPRGGSPHSPAWNGYTPLH 203

Query: 194 IAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDE 253
           IAA Q  V V   L+++  S    +   V   TPL LAA+ GHA +V +L+   A+    
Sbjct: 204 IAAKQNQVEVARSLLQYGGSANAESVQGV---TPLHLAAQEGHAEMVALLLSKQANGNLG 260

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHV 313
           NK+G T +HL AQ GH  V + +     +   + ++G T LHVA+++G    V+ LL H 
Sbjct: 261 NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 320

Query: 314 PGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYN 373
                               + G +PLH AA  G+ ++V LLL   G   +  +  +G  
Sbjct: 321 ADVNAKT-------------KLGYSPLHQAAQQGHTDIVTLLL-KNGASPNEVS-SDGTT 365

Query: 374 PLHLACFGGHVTVVGLL--LSRAADLLQSADKNGKT 407
           PL +A   G+++V  +L  ++     +  +DK+  +
Sbjct: 366 PLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMS 401

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (441), Expect = 7e-48
 Identities = 115/393 (29%), Positives = 165/393 (41%), Gaps = 38/393 (9%)

Query: 337 MTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAAD 396
           +TPLH+A++ G+  +V+ LL   G   +         PLH+A   GH  V   LL   A 
Sbjct: 1   LTPLHVASFMGHLPIVKNLL-QRGASPNVSN-VKVETPLHMAARAGHTEVAKYLLQNKAK 58

Query: 397 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINT 456
            + +  K+ +T LH AA  GH  MV++LL   A  N     G   +H AAR GHV  +  
Sbjct: 59  -VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLA 117

Query: 457 LLQKGEKVDVTTNNLAC--------GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHG 508
           LL+K       T             G V V  LLL R A    +A KNG T LH+A  H 
Sbjct: 118 LLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-PNAAGKNGLTPLHVAVHHN 176

Query: 509 HLQMVEVLLGQGAEINATDK----------------VCDALLTHKAFINSKSRVGRTALH 552
           +L +V++LL +G   ++                   V  +LL +    N++S  G T LH
Sbjct: 177 NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLH 236

Query: 553 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDD 612
           LAA  G+A++    +    A  ++      TPLHL A+ G + V  +L+  G  +DAT  
Sbjct: 237 LAAQEGHAEMVAL-LLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR 295

Query: 613 QGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALA 672
            G  P+HVA+     ++ +     H + V A TK         A   H +     LL L 
Sbjct: 296 MGYTPLHVASHYGNIKLVKFL-LQHQADVNAKTKLGYSPLHQAAQQGHTD--IVTLL-LK 351

Query: 673 AGADSAGRILTATDRRNIEFLDVLIENEQKEVI 705
            GA                 L +        V 
Sbjct: 352 NGAS-----PNEVSSDGTTPLAIAKRLGYISVT 379

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (367), Expect = 4e-38
 Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 8/282 (2%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
              T  G+TPL +A   G + +   +L   A  +   + G + LH+A  H  L +   LL
Sbjct: 126 ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLL 185

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
                 +S +  G T LH+AA     ++ R L+       +  +++  TPLHLAA+ G  
Sbjct: 186 PRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG-GSANAESVQGVTPLHLAAQEGHA 244

Query: 135 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHI 194
           ++  LLL   A+ +  +  G  P+H+ AQ     VA + ++ H  +V ATT+ G T  H+
Sbjct: 245 EMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK-HGVMVDATTRMGYTPLHV 303

Query: 195 AAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDEN 254
           A+  G++ +++ L++         +      +PL  AA+ GH ++V +L+K GAS  + +
Sbjct: 304 ASHYGNIKLVKFLLQHQADVNAKTKLG---YSPLHQAAQQGHTDIVTLLLKNGASPNEVS 360

Query: 255 KTGFTAVHLAAQNGHNQV---LEEMRSSKALNVYSKKLGVTA 293
             G T + +A + G+  V   L+ +    +  + S K  ++ 
Sbjct: 361 SDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSF 402

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (378), Expect = 7e-41
 Identities = 81/300 (27%), Positives = 129/300 (43%), Gaps = 39/300 (13%)

Query: 333 SESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLS 392
           +      L  A  + + ++V+ LL   G  V+ Q +E G+ PLH A       +V LLL 
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60

Query: 393 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG 452
             AD      KNG T   +AA  G ++++++ L +GA++N  D  G  +   AA YG V 
Sbjct: 61  HGADP-VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVK 119

Query: 453 IINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 512
            +  L ++G  V++                        +   K G T L  AA  GH+++
Sbjct: 120 ALKFLYKRGANVNLRRKTKED----------------QERLRKGGATALMDAAEKGHVEV 163

Query: 513 VEVLLGQ-GAEINATDK--------------------VCDALLTHKAFINSKSRVGRTAL 551
           +++LL + GA++NA D                     +   LL H A +N +   G+T L
Sbjct: 164 LKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPL 223

Query: 552 HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD 611
            LA    +  L + L+      I+      +T L LA E    ++ +LL   GAS D  D
Sbjct: 224 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (326), Expect = 5e-34
 Identities = 66/343 (19%), Positives = 117/343 (34%), Gaps = 61/343 (17%)

Query: 187 DGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKA 246
           + N     A     V ++++L+  +    ++ +      TPL  A +    ++V +L++ 
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLL--EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 247 GASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTV 306
           GA      K G T   LAA  G  ++L+   S  A        G TA   AA +G+   +
Sbjct: 62  GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121

Query: 307 RELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQ 366
           + L                    E   + G T L  AA  G+  V+++LL+  G  V+A 
Sbjct: 122 KFLYKRGANVNLRRKTKEDQ---ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC 178

Query: 367 TQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLG 426
                   +H                                           +  +LL 
Sbjct: 179 DNMGRNALIHALLSSDD-------------------------------SDVEAITHLLLD 207

Query: 427 QGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRA 486
            GA++N   + G   +  A    H+G++  LL++                          
Sbjct: 208 HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE------------------------H 243

Query: 487 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKV 529
            ++    D +GKT L +A      ++ E+L  +GA  +  D V
Sbjct: 244 IEI-NDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLV 285

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (313), Expect = 3e-32
 Identities = 71/323 (21%), Positives = 121/323 (37%), Gaps = 56/323 (17%)

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT 182
             L  A +   + + + LL+ GA+++  ++                              
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQEE------------------------------ 36

Query: 183 ATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV 242
              + G T  H A       ++E L++           +   ATP  LAA  G   ++++
Sbjct: 37  ---EGGWTPLHNAVQMSREDIVELLLRHGA---DPVLRKKNGATPFLLAAIAGSVKLLKL 90

Query: 243 LVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA----------LNVYSKKLGVT 292
            +  GA   + +  GFTA   AA  G  + L+ +    A               +K G T
Sbjct: 91  FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT 150

Query: 293 ALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVV 352
           AL  AA  G  + ++ LL  +   V +           +G  + +  L  +  S  E + 
Sbjct: 151 ALMDAAEKGHVEVLKILLDEMGADVNA--------CDNMGRNALIHALLSSDDSDVEAIT 202

Query: 353 RLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIA 412
            LLL   G  V+ +  E G  PL LA    H+ +V  LL +    +   D +GKT L +A
Sbjct: 203 HLLL-DHGADVNVRG-ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLA 260

Query: 413 ATHGHLQMVEVLLGQGAEINATD 435
                 ++ E+L  +GA  +  D
Sbjct: 261 VELKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (285), Expect = 2e-28
 Identities = 73/316 (23%), Positives = 119/316 (37%), Gaps = 42/316 (13%)

Query: 365 AQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
           A  ++N  + L  A     V +V  LL   A++    ++ G T LH A       +VE+L
Sbjct: 1   AAVEDN--HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELL 58

Query: 425 LGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLS 484
           L  GA+     K GA     AA  G V ++   L KG  V                    
Sbjct: 59  LRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-------------------- 98

Query: 485 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKS 544
                    D  G T    AA +G ++ ++ L  +GA +N   K  +             
Sbjct: 99  ------NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE-------DQERLR 145

Query: 545 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ----LQVCKLL 600
           + G TAL  AA  G+ ++ + L+ +  A ++      +  L  A  +        +  LL
Sbjct: 146 KGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLL 205

Query: 601 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKH 660
           LD GA ++   ++G+ P+ +A +     + Q  L      +  T  + + A  L    K 
Sbjct: 206 LDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL 265

Query: 661 CEGMATELLALAAGAD 676
            +    ELL    GA 
Sbjct: 266 KK--IAELL-CKRGAS 278

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 5e-28
 Identities = 58/273 (21%), Positives = 98/273 (35%), Gaps = 14/273 (5%)

Query: 53  EGRSALHLAAEHGYLKVCDALLTHKAFINSK-SRVGRTALHLAAMNGYADLCRFLVHDHA 111
           E    L  A ++  + +   LL   A +N +    G T LH A      D+   L+   A
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 112 AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQ 171
             +        TP  LAA AG +++ KL L  GA ++  D  G      AA     +  +
Sbjct: 64  DPVLRKK-NGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALK 122

Query: 172 IFLRAHPS---------LVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARN-- 220
              +   +               K G T    AA +G V V++ L+    + V +  N  
Sbjct: 123 FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMG 182

Query: 221 RVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSK 280
           R      L  + +     +  +L+  GA      + G T + LA +  H  +++ +   +
Sbjct: 183 RNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE 242

Query: 281 ALNVYSK-KLGVTALHVAAYFGQADTVRELLSH 312
            + +      G TAL +A           L   
Sbjct: 243 HIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 9e-27
 Identities = 63/273 (23%), Positives = 104/273 (38%), Gaps = 16/273 (5%)

Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQE-GRSALHLAAEHGYLKVCDALLTHKAFIN 81
             L+ A     ++LV  +L   A V+  ++E G + LH A +     + + LL H A   
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66

Query: 82  SKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 141
            + + G T   LAA+ G       L     A ++       T    AA  G+++  K L 
Sbjct: 67  LRKKNGATPFLLAAIAGSVK-LLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY 125

Query: 142 DLGAS----------IDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTC 191
             GA+           +     G   +  AA+    EV +I L    + V A    G   
Sbjct: 126 KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA 185

Query: 192 AHIAAMQGSVGVIEELMKF--DRSGVISARNRVTEATPLQLAAEGGHANVVRVLV-KAGA 248
              A +      +E +     D    ++ R    + TPL LA E  H  +V+ L+ +   
Sbjct: 186 LIHALLSSDDSDVEAITHLLLDHGADVNVRGERGK-TPLILAVEKKHLGLVQRLLEQEHI 244

Query: 249 SCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281
              D +  G TA+ LA +    ++ E +    A
Sbjct: 245 EINDTDSDGKTALLLAVELKLKKIAELLCKRGA 277

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 8e-26
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 17/243 (6%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
           GWTPL  A      ++V  +L + A   +  + G +   LAA  G +K+    L+  A +
Sbjct: 39  GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV 98

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHA---------AVIDILTLRKQTPLHLAAEA 131
           N     G TA   AA+ G     +FL    A            + L     T L  AAE 
Sbjct: 99  NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158

Query: 132 GQLQVCKLLLD-LGASIDATDDQGQ---KPIHVAAQNNFPEVAQIFLRAHPSLVTATTKD 187
           G ++V K+LLD +GA ++A D+ G+       +++ ++  E     L  H + V    + 
Sbjct: 159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 218

Query: 188 GNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLVKA 246
           G T   +A  +  +G+++ L+  ++  + I+  +     T L LA E     +  +L K 
Sbjct: 219 GKTPLILAVEKKHLGLVQRLL--EQEHIEINDTDS-DGKTALLLAVELKLKKIAELLCKR 275

Query: 247 GAS 249
           GAS
Sbjct: 276 GAS 278

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.3 bits (246), Expect = 2e-23
 Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 5/142 (3%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLA----AEHGYLKV 69
            +    G T L+ A  +GH+E++  +L+   A V+  D  GR+AL  A     +     +
Sbjct: 142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAI 201

Query: 70  CDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA 129
              LL H A +N +   G+T L LA    +  L + L+      I+      +T L LA 
Sbjct: 202 THLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAV 261

Query: 130 EAGQLQVCKLLLDLGASIDATD 151
           E    ++ +LL   GAS D  D
Sbjct: 262 ELKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.7 bits (216), Expect = 2e-19
 Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 15/177 (8%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHA----------RVDVFDQEGRSALHLAAEH 64
           N+    G+T  + A   G ++ +  +    A            +   + G +AL  AAE 
Sbjct: 99  NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158

Query: 65  GYLKVCDALLTHK-AFINSKSRVGRTALHLAAMNGYADLCRFLVH---DHAAVIDILTLR 120
           G+++V   LL    A +N+   +GR AL  A ++        + H   DH A +++   R
Sbjct: 159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 218

Query: 121 KQTPLHLAAEAGQLQVCKLLLDL-GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176
            +TPL LA E   L + + LL+     I+ TD  G+  + +A +    ++A++  + 
Sbjct: 219 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (155), Expect = 1e-11
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLAAEHGYLKVCDA 72
           +N +   G TPL++A  + H+ LV  +L      ++  D +G++AL LA E    K+ + 
Sbjct: 212 VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 271

Query: 73  LLTHKAFINSK 83
           L    A  +  
Sbjct: 272 LCKRGASTDCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 0.004
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFD 51
           +N   S G T LL+A      ++   +    A  D  D
Sbjct: 246 INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  136 bits (343), Expect = 1e-35
 Identities = 54/357 (15%), Positives = 100/357 (28%), Gaps = 56/357 (15%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           L   +      + +   +   ++   +   +A  +   ++                    
Sbjct: 39  LMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQL------------------- 79

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFL--VHDHAAVIDILTLRKQTPLHLAAEA 131
               +  + K         +AA+ G +     L  +     ++ ++         LAAE 
Sbjct: 80  ---WSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAEN 136

Query: 132 GQLQVCKLLLDLGASIDATD--DQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTK--D 187
           G L V   L +L  +        +      +AA+N    V        P+  TA  +  +
Sbjct: 137 GHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAEN 196

Query: 188 GNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAG 247
                  A  +G   VI  L+                A       E G   V   + +  
Sbjct: 197 YYAFRWAAVGRGHHNVINFLLDCPVML----------AYAEIHEFEYGEKYVNPFIAR-- 244

Query: 248 ASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVR 307
               +  K    A  L+  +G   ++ +    +          +  L         D +R
Sbjct: 245 --HVNRLKEMHDAFKLSNPDGVFDLVTKSECLQG------FYMLRNLIRRNDEVLLDDIR 296

Query: 308 ELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVD 364
            LLS     +K+  PT                L LA   GN+    LLL+   V   
Sbjct: 297 FLLSI--PGIKALAPTATI------PGDANELLRLALRLGNQGACALLLSIPSVLAL 345

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  136 bits (343), Expect = 1e-35
 Identities = 52/364 (14%), Positives = 91/364 (25%), Gaps = 43/364 (11%)

Query: 253 ENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKL-GVTALHVAAYFGQADTVRELLS 311
           EN      + L        + +   S+  L++ +        + +          + L  
Sbjct: 8   ENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCL 67

Query: 312 HVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLL--LNSAGVQVDAQTQE 369
           +     ++     +                +AA +G  + +  L  L ++   V      
Sbjct: 68  YYAHYNRNAKQLWSDA--HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQ-A 124

Query: 370 NGYNPLHLACFGGHVTVVGLLLSRAADL-LQSADKNGKTCLHIAATHGHLQMVEVLLGQG 428
             Y    LA   GH+ V+  L   A    +            +AA +GHL ++  L    
Sbjct: 125 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELA 184

Query: 429 AEIN---ATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLA-CGHVTVVGLLLS 484
                     +        A   GH  +IN LL     +     +    G   V   +  
Sbjct: 185 PTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIAR 244

Query: 485 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKS 544
                     K       ++   G   +V                             + 
Sbjct: 245 HVNR-----LKEMHDAFKLSNPDGVFDLVT-----------------------KSECLQG 276

Query: 545 RVGRTALHLAAMNGYADLCRFLVH----DHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 600
                 L         D  RFL+        A    +       L LA   G    C LL
Sbjct: 277 FYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL 336

Query: 601 LDLG 604
           L + 
Sbjct: 337 LSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  127 bits (319), Expect = 2e-32
 Identities = 49/342 (14%), Positives = 100/342 (29%), Gaps = 44/342 (12%)

Query: 338 TPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADL 397
             L L  +   EN+ +  +++  + +   + +   + + L        V  LL    A  
Sbjct: 14  PQLRLIPWILWENLFQHFISANELSLMTLSYKEAIH-IFLPGTKNMEQVRQLLCLYYAHY 72

Query: 398 ----------LQSADKNGKTCLHIAATHGH---LQMVEVLLGQGAEINATDKGGARSIHT 444
                             +    +AA  G    L  + +LL     +        ++   
Sbjct: 73  NRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRL 132

Query: 445 AARYGHVGIINTLLQKGEKVDVTTNNL----------ACGHVTVVGLLLSRAADL--LQS 492
           AA  GH+ ++N L +      +                 GH+ V+  L   A        
Sbjct: 133 AAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMI 192

Query: 493 ADKNGKTCLHIAATHGHLQMVEVLLGQG-----AEINATDKVCDALLTHKAFINSKSRVG 547
             +N       A   GH  ++  LL        AEI+  +     +    A   ++ +  
Sbjct: 193 QAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEM 252

Query: 548 RTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA-- 605
             A  L+  +G  D     +   +  +    +     L    +   L   + LL +    
Sbjct: 253 HDAFKLSNPDGVFD-----LVTKSECLQGFYML--RNLIRRNDEVLLDDIRFLLSIPGIK 305

Query: 606 ---SIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTAT 644
                        + + +A +        + L   PS++  T
Sbjct: 306 ALAPTATIPGDANELLRLALRLGNQGACALLLS-IPSVLALT 346

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  121 bits (304), Expect = 2e-30
 Identities = 55/357 (15%), Positives = 99/357 (27%), Gaps = 53/357 (14%)

Query: 89  TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID 148
             L L     + +L +  +  +   +  L+ ++   + L       QV +LL    A  +
Sbjct: 14  PQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYN 73

Query: 149 ATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELM 208
               Q     H                                  +AA+ G    ++ L 
Sbjct: 74  RNAKQLWSDAHKKG-----------------------IKSEVICFVAAITGCSSALDTLC 110

Query: 209 KFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASC--TDENKTGFTAVHLAAQ 266
               S  I    +       +LAAE GH +V+  L +   +          + A  LAA+
Sbjct: 111 LLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAE 170

Query: 267 NGH---NQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPT 323
           NGH      L E+  ++A  +   +        A   G  + +  LL      + +    
Sbjct: 171 NGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC--PVMLAYAEI 228

Query: 324 GASFLGEL-----------GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGY 372
                GE              +       L+   G  ++V       G            
Sbjct: 229 HEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQG--------FYML 280

Query: 373 NPLHLACFGGHVTVVGLLLSRAADLLQSAD----KNGKTCLHIAATHGHLQMVEVLL 425
             L        +  +  LLS       +       +    L +A   G+     +LL
Sbjct: 281 RNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLL 337

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  119 bits (299), Expect = 9e-30
 Identities = 40/278 (14%), Positives = 71/278 (25%), Gaps = 33/278 (11%)

Query: 9   EISKALNKQTSIGWTPLLIACNRGH---MELVNTMLNNHARVDVFDQEGRSALHLAAEHG 65
           ++    +K+         +A   G    ++ +  +L +   V V   E   A  LAAE+G
Sbjct: 78  QLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG 137

Query: 66  YLKVCDALLTHKAFINSK--SRVGRTALHLAAMNGYADLCRFLVHDHAAVID--ILTLRK 121
           +L V + L                  A  LAA NG+  +   L           I     
Sbjct: 138 HLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENY 197

Query: 122 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
                 A   G   V   LLD    +               +     V     R      
Sbjct: 198 YAFRWAAVGRGHHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNPFIARHV---- 246

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
               K+ +    ++   G   ++ +                     L    +    + +R
Sbjct: 247 -NRLKEMHDAFKLSNPDGVFDLVTKS---------ECLQGFYMLRNLIRRNDEVLLDDIR 296

Query: 242 VLVKAGA-----SCTDENKTGFTAVHLAAQNGHNQVLE 274
            L+                     + LA + G+     
Sbjct: 297 FLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACA 334

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  117 bits (293), Expect = 5e-29
 Identities = 54/353 (15%), Positives = 86/353 (24%), Gaps = 70/353 (19%)

Query: 224 EATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALN 283
           EA  + L        V ++L    A      K  ++  H                     
Sbjct: 46  EAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSE-------------- 91

Query: 284 VYSKKLGVTALHVAAYFGQAD---TVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPL 340
                       VAA  G +    T+  LL+                  ++         
Sbjct: 92  --------VICFVAAITGCSSALDTLCLLLTS-----------DEIV--KVIQAENYQAF 130

Query: 341 HLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADL--L 398
            LAA +G+ +V+  L   A  ++ A  Q   Y+   LA   GH+ V+  L   A      
Sbjct: 131 RLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATA 190

Query: 399 QSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLL 458
               +N       A   GH  ++  LL     +   +            YG   +   + 
Sbjct: 191 MIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAE-------IHEFEYGEKYVNPFIA 243

Query: 459 QKG----EKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVE 514
           +      E  D    +   G   +V                     L        L  + 
Sbjct: 244 RHVNRLKEMHDAFKLSNPDGVFDLVT-------KSECLQGFYMLRNLIRRNDEVLLDDIR 296

Query: 515 VLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 567
            LL                        +        L LA   G    C  L+
Sbjct: 297 FLLSIPGIKALAP------------TATIPGDANELLRLALRLGNQGACALLL 337

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 84.9 bits (209), Expect = 4e-18
 Identities = 35/244 (14%), Positives = 67/244 (27%), Gaps = 11/244 (4%)

Query: 472 ACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCD 531
                 +    +S     L +        + +  T    Q+ ++L    A  N   K   
Sbjct: 21  WILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQL- 79

Query: 532 ALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL--VHDHAAVIDILTLRKQTPLHLAA 589
                 +  + K         +AA+ G +     L  +     ++ ++         LAA
Sbjct: 80  -----WSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 134

Query: 590 EAGQLQVCKLLLDLGASIDATD--DQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKE 647
           E G L V   L +L  +        +      +AA+N    V        P+  TA  + 
Sbjct: 135 ENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQA 194

Query: 648 KERAKDLIAAGKHCEGMATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAH 707
           +       AA           L L      A   +   +         +  +  +    H
Sbjct: 195 ENYYAFRWAAVGRGHHNVINFL-LDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH 253

Query: 708 TVVQ 711
              +
Sbjct: 254 DAFK 257

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 73.4 bits (179), Expect = 3e-14
 Identities = 22/148 (14%), Positives = 35/148 (23%), Gaps = 14/148 (9%)

Query: 1   MLEQMSGTEISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHL 60
                    +   L     +     +     G   +   +  +  R     +E   A  L
Sbjct: 203 AAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNR----LKEMHDAFKL 258

Query: 61  AAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH----DHAAVIDI 116
           +   G   +       + F           L         D  RFL+        A    
Sbjct: 259 SNPDGVFDLVTKSECLQGFY------MLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTAT 312

Query: 117 LTLRKQTPLHLAAEAGQLQVCKLLLDLG 144
           +       L LA   G    C LLL + 
Sbjct: 313 IPGDANELLRLALRLGNQGACALLLSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 39.9 bits (92), Expect = 0.001
 Identities = 34/204 (16%), Positives = 55/204 (26%), Gaps = 21/204 (10%)

Query: 549 TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID 608
             L L     + +L +  +  +   +  L+ ++   + L       QV +LL    A  +
Sbjct: 14  PQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYN 73

Query: 609 ATDDQ-----------GQKPIHVAAQNNFPEVAQI--FLRAHPSLVTATTKEKERAKDLI 655
               Q            +    VAA             L     +V     E  +A  L 
Sbjct: 74  RNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA 133

Query: 656 AAGKHCEGMATELLALAAGADSAGR-------ILTATDRRNIEFLDVLIENEQKEVIAHT 708
           A   H   +   L  LA     A            A +  ++  L+ L E    E  A  
Sbjct: 134 AENGHLH-VLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMI 192

Query: 709 VVQRYLQELWQGSLNWAAWKTMLL 732
             + Y    W             L
Sbjct: 193 QAENYYAFRWAAVGRGHHNVINFL 216

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  118 bits (296), Expect = 2e-30
 Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 6/252 (2%)

Query: 220 NRVTE--ATPLQLAAEGGHANVVRVLVKAGASCTD---ENKTGFTAVHLAAQNGHNQVLE 274
             VTE   T L LA    H   +  L+   A       +N  G TA+HLAA  G    +E
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVE 62

Query: 275 EMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSE 334
           ++ ++ A  + +++ G TALH+A           LL   P   +    T  +   +   +
Sbjct: 63  KLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122

Query: 335 SGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRA 394
           +   P  + +    EN          +Q++A+   +G+ PLH+A       +V LL    
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY-DGHTPLHVAVIHKDAEMVRLLRDAG 181

Query: 395 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGII 454
           ADL +     G+T LH+A       ++E+LL  GA+  A   GG   + +A    +  + 
Sbjct: 182 ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA 241

Query: 455 NTLLQKGEKVDV 466
             L   G     
Sbjct: 242 RLLRAHGAPEPE 253

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  113 bits (282), Expect = 2e-28
 Identities = 53/246 (21%), Positives = 90/246 (36%), Gaps = 15/246 (6%)

Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGA---EINATDKGGARSIHTAARYGHVGIINTLL 458
            ++G T LH+A  H H   ++ LLG  A    ++  +  G  ++H AA  G    +  L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 459 QKGEKVDVTTNNLAC--------GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHL 510
             G  V V                  T   +LL           ++        +     
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPS----HPRDASDTYLTQSQDCTP 121

Query: 511 QMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH 570
                     ++ N  ++        +  + +++  G T LH+A ++  A++ R L    
Sbjct: 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG 181

Query: 571 AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVA 630
           A +        +TPLHLA EA    V +LLL  GA   A    G+ P+  A     P +A
Sbjct: 182 ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA 241

Query: 631 QIFLRA 636
           ++    
Sbjct: 242 RLLRAH 247

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  100 bits (249), Expect = 4e-24
 Identities = 54/259 (20%), Positives = 84/259 (32%), Gaps = 32/259 (12%)

Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAAD--LLQSADKNGKTCLHIAATHGHLQMVEVLLG 426
           E+G   LHLA    H   +  LL  +A    L   +  G+T LH+AA  G    VE L  
Sbjct: 7   EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA 66

Query: 427 QGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRA 486
            GA +   ++GG  ++H A R         LLQ         ++            L+++
Sbjct: 67  AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDT----------YLTQS 116

Query: 487 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT-----------------DKV 529
            D   + D +       +  +   +          ++ A                  + V
Sbjct: 117 QDC--TPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMV 174

Query: 530 CDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAA 589
                        +   GRT LHLA     A +   L+    A         +TPL  A 
Sbjct: 175 RLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLL-KAGADPTARMYGGRTPLGSAL 233

Query: 590 EAGQLQVCKLLLDLGASID 608
                 + +LL   GA   
Sbjct: 234 LRPNPILARLLRAHGAPEP 252

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 96.3 bits (238), Expect = 1e-22
 Identities = 59/251 (23%), Positives = 91/251 (36%), Gaps = 19/251 (7%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHA---RVDVFDQEGRSALHLAAEHGYLKVC 70
               T  G T L +A    H   ++ +L   A    +D+ +  G++ALHLAA  G     
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

Query: 71  DALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAA---------VIDILTLRK 121
           + L    A +    R G TALHLA           L+    +         +        
Sbjct: 62  EKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121

Query: 122 QTPLHLAA----EAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 177
            T    AA       + +      D    ++A +  G  P+HVA  +   E+ ++   A 
Sbjct: 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG 181

Query: 178 PSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHA 237
             L       G T  H+A    +  V+E L+K       +AR      TPL  A    + 
Sbjct: 182 ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD--PTARMY-GGRTPLGSALLRPNP 238

Query: 238 NVVRVLVKAGA 248
            + R+L   GA
Sbjct: 239 ILARLLRAHGA 249

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.5 bits (236), Expect = 2e-22
 Identities = 55/254 (21%), Positives = 80/254 (31%), Gaps = 35/254 (13%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
           G TALH+A        +  LL    G    D             + G T LHLAA  G  
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQN----------DLGQTALHLAAILGEA 58

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAAD---------LLQS 400
           + V      A        +  G+  LHLAC     T   +LL              L QS
Sbjct: 59  STVEK--LYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116

Query: 401 ADKNGKTCLHIAATH----GHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINT 456
            D    T    AA         +          ++ A +  G   +H A  +    ++  
Sbjct: 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRL 176

Query: 457 LLQKGEKVD---------VTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH 507
           L   G  ++              +     +V+ LLL   AD   +    G+T L  A   
Sbjct: 177 LRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP-TARMYGGRTPLGSALLR 235

Query: 508 GHLQMVEVLLGQGA 521
            +  +  +L   GA
Sbjct: 236 PNPILARLLRAHGA 249

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.1 bits (144), Expect = 2e-10
 Identities = 34/186 (18%), Positives = 61/186 (32%), Gaps = 8/186 (4%)

Query: 547 GRTALHLAAMNGYADLCRFLVHDHA--AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 604
           G TALHLA ++ +     FL+   A    +D+     QT LHLAA  G+    + L   G
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68

Query: 605 ASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGM 664
           A +   +  G   +H+A +      A + L+  PS        ++ +   +   + C   
Sbjct: 69  AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPS------HPRDASDTYLTQSQDCTPD 122

Query: 665 ATELLALAAGADSAGRILTATDRRNIEFLDVLIENEQKEVIAHTVVQRYLQELWQGSLNW 724
            +   A      +        D      L+    +    +    + +             
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182

Query: 725 AAWKTM 730
              K  
Sbjct: 183 DLNKPE 188

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  116 bits (290), Expect = 2e-29
 Identities = 61/307 (19%), Positives = 106/307 (34%), Gaps = 40/307 (13%)

Query: 338 TPLHLA-AYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAAD 396
           +P+ L    +G+  +   +   +   V+     +    LH             L+   A 
Sbjct: 2   SPIKLHTEAAGSYAITEPITRES---VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAK 58

Query: 397 LLQSA-------DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYG 449
              +A       D +  T L +A      ++V  L+  GA+    +K    ++H AA   
Sbjct: 59  ECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANR 118

Query: 450 HVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGH 509
             G++  +L   +           G                        T L I A +  
Sbjct: 119 DFGMMVYMLNSTKLKGDIEELDRNGM-----------------------TALMIVAHNEG 155

Query: 510 LQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHD 569
                      +     +K         A  +S+   GRTALH AA      + ++LV +
Sbjct: 156 RDQ------VASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE 209

Query: 570 HAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEV 629
             +  D      +TP+ LAA+ G+++V   L+  GAS++A D        +A  NN   +
Sbjct: 210 KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNI 269

Query: 630 AQIFLRA 636
             IF R 
Sbjct: 270 VDIFDRC 276

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 94.4 bits (233), Expect = 9e-22
 Identities = 59/308 (19%), Positives = 102/308 (33%), Gaps = 36/308 (11%)

Query: 259 TAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVK 318
           + + L  +   +  + E  + +++N+   +   T LH  A    A+   +L+ H     K
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVH---EAK 58

Query: 319 SDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLA 378
                GA            TPL LA  +    +V  L+ +          E        A
Sbjct: 59  ECIAAGADV--NAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAA 116

Query: 379 CFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGG 438
                + V  L  ++    ++  D+NG T L I A +     V        +    D  G
Sbjct: 117 NRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDG 176

Query: 439 ARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGK 498
           A    +    G      T L                ++ +V  L+          D++GK
Sbjct: 177 AARKDSEKYKG-----RTALH---------YAAQVSNMPIVKYLVGEKGSNKDKQDEDGK 222

Query: 499 TCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG 558
           T + +AA  G +++V  L+ QGA + A D                     TA  LA  N 
Sbjct: 223 TPIMLAAQEGRIEVVMYLIQQGASVEAVDA-----------------TDHTARQLAQANN 265

Query: 559 YADLCRFL 566
           + ++    
Sbjct: 266 HHNIVDIF 273

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 91.7 bits (226), Expect = 7e-21
 Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 24/273 (8%)

Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHK----- 77
           +P+ +         +   +   +   +  +  R+ LH  A +   +  + L+ H+     
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61

Query: 78  ---AFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
              A +N+      T L LA +     L  +L+   A         +++ LH AA     
Sbjct: 62  AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIY-NKSERSALHQAAANRDF 120

Query: 135 QVCKLLLDLGASIDATDDQGQK---PIHVAAQNNFPEV----------AQIFLRAHPSLV 181
            +   +L+        ++  +     + + A N   +                    +  
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180

Query: 182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVR 241
            +    G T  H AA   ++ +++        G    +      TP+ LAA+ G   VV 
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVK--YLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVM 238

Query: 242 VLVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
            L++ GAS    + T  TA  LA  N H+ +++
Sbjct: 239 YLIQQGASVEAVDATDHTARQLAQANNHHNIVD 271

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 90.2 bits (222), Expect = 2e-20
 Identities = 52/339 (15%), Positives = 101/339 (29%), Gaps = 65/339 (19%)

Query: 122 QTPLHLAAEA-GQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL 180
           ++P+ L  EA G   + + +      ++  D                             
Sbjct: 1   ESPIKLHTEAAGSYAITEPITRES--VNIIDP---------------------------- 30

Query: 181 VTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVV 240
                +   T  H  A   S    E+L+  +    I+                       
Sbjct: 31  -----RHNRTVLHWIASNSSAEKSEDLIVHEAKECIA----------------------- 62

Query: 241 RVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYF 300
                AGA     +    T + LA      +++  +  + A      K   +ALH AA  
Sbjct: 63  -----AGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAAN 117

Query: 301 GQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAG 360
                +  +L+        +          +          +A+          +     
Sbjct: 118 RDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA 177

Query: 361 VQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQM 420
            + D++    G   LH A    ++ +V  L+          D++GKT + +AA  G +++
Sbjct: 178 ARKDSEKY-KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEV 236

Query: 421 VEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ 459
           V  L+ QGA + A D     +   A    H  I++   +
Sbjct: 237 VMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 89.0 bits (219), Expect = 6e-20
 Identities = 50/289 (17%), Positives = 94/289 (32%), Gaps = 37/289 (12%)

Query: 89  TALHLA-AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL---- 143
           + + L     G   +   +  +   +ID      +T LH  A     +  + L+      
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNIID--PRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59

Query: 144 ----GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQG 199
               GA ++A D     P+ +A       +    ++A          + +     AA   
Sbjct: 60  CIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAAN-R 118

Query: 200 SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHA-----------NVVRVLVKAGA 248
             G++  ++   +             T L + A                   +V     A
Sbjct: 119 DFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA 178

Query: 249 SCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVR 307
               E   G TA+H AAQ  +  +++ +   K  N   + + G T + +AA  G+ + V 
Sbjct: 179 RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVM 238

Query: 308 ELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLL 356
            L+             GAS   E    +  T   LA  + + N+V +  
Sbjct: 239 YLIQQ-----------GASV--EAVDATDHTARQLAQANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 77.5 bits (189), Expect = 5e-16
 Identities = 35/152 (23%), Positives = 62/152 (40%)

Query: 25  LLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS 84
            ++   +   ++     N    + +           +A+    K         A  +S+ 
Sbjct: 125 YMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEK 184

Query: 85  RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 144
             GRTALH AA      + ++LV +  +  D      +TP+ LAA+ G+++V   L+  G
Sbjct: 185 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG 244

Query: 145 ASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176
           AS++A D        +A  NN   +  IF R 
Sbjct: 245 ASVEAVDATDHTARQLAQANNHHNIVDIFDRC 276

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 58.6 bits (140), Expect = 9e-10
 Identities = 15/58 (25%), Positives = 27/58 (46%)

Query: 17  QTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           Q   G TP+++A   G +E+V  ++   A V+  D    +A  LA  + +  + D   
Sbjct: 217 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 43.2 bits (100), Expect = 9e-05
 Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 582 QTPLHLAAEA-GQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           ++P+ L  EA G   + + +     +I       +  +H  A N+  E ++  +
Sbjct: 1   ESPIKLHTEAAGSYAITEPITRESVNIIDPRH-NRTVLHWIASNSSAEKSEDLI 53

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  111 bits (277), Expect = 2e-27
 Identities = 42/269 (15%), Positives = 82/269 (30%), Gaps = 28/269 (10%)

Query: 356 LNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH 415
           LN+     +++   +     H++       V     +   +L    D++G T LH   + 
Sbjct: 58  LNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSI 117

Query: 416 GHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGH 475
            +L++V+ L+  G+     D  G   +  A +  +                         
Sbjct: 118 ANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN----------------------NYD 155

Query: 476 VTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLT 535
                 LL      L   D   +T LH       +          A+      +   +  
Sbjct: 156 SGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAA----AKYYLDILMGWIVKK 211

Query: 536 HKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH--AAVIDILTLRKQTPLHLAAEAGQ 593
               I S +    +  +         +   L      A +++       T L++AA  G 
Sbjct: 212 QNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGN 271

Query: 594 LQVCKLLLDLGASIDATDDQGQKPIHVAA 622
           + +   LLD GA     +  G +P+   A
Sbjct: 272 ISIVDALLDYGADPFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 89.7 bits (221), Expect = 5e-20
 Identities = 54/316 (17%), Positives = 112/316 (35%), Gaps = 42/316 (13%)

Query: 138 KLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI--FLRAHPSLVTATTKDGNTCAHIA 195
           K++  L + +   ++Q  K      +  FPE+ ++   L    S   +     N      
Sbjct: 20  KIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 79

Query: 196 AMQGSVGVIEELM---KFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTD 252
           +    +  + +     + + +  +         TPL       +  +V+ LVK G++   
Sbjct: 80  SFDSLLQEVNDAFPNTQLNLNIPVDEHGN----TPLHWLTSIANLELVKHLVKHGSNRLY 135

Query: 253 ENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSH 312
            +  G + +  A ++ +N                                 + + + L  
Sbjct: 136 GDNMGESCLVKAVKSVNNYDSGTF---------------------------EALLDYLYP 168

Query: 313 VPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGY 372
                 S   T    L  +   SGMT    AA    + ++  ++      + + T     
Sbjct: 169 CLILEDSMNRTI---LHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT-NEKE 224

Query: 373 NPLHLACFGGHVTVVGLLLSRA--ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAE 430
           +  +        +++  L  +   A++L + D NG TCL+IAA  G++ +V+ LL  GA+
Sbjct: 225 SKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD 284

Query: 431 INATDKGGARSIHTAA 446
               +K G R +   A
Sbjct: 285 PFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 89.3 bits (220), Expect = 7e-20
 Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 20/195 (10%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLK----VCDALLTH 76
           G TPL    +  ++ELV  ++ + +     D  G S L  A +             L   
Sbjct: 107 GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL 166

Query: 77  KAFINSKSRVGRTALHLAAMNGYADLCR------------FLVHDHAAVIDILTLRKQTP 124
              +  +  + RT LH   +      C             ++V      I   T  K++ 
Sbjct: 167 YPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK 226

Query: 125 LHLAAEAGQLQVCKLLL---DLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 181
            +      +  + + L     +   ++A D  G   +++AA+     +    L       
Sbjct: 227 PNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD-P 285

Query: 182 TATTKDGNTCAHIAA 196
               K G       A
Sbjct: 286 FIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 85.5 bits (210), Expect = 1e-18
 Identities = 33/206 (16%), Positives = 63/206 (30%), Gaps = 37/206 (17%)

Query: 488 DLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK------------------- 528
           +L    D++G T LH   +  +L++V+ L+  G+     D                    
Sbjct: 98  NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSG 157

Query: 529 -VCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCR------------FLVHDHAAVID 575
                L      +  +  + RT LH   +      C             ++V      I 
Sbjct: 158 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQ 217

Query: 576 ILTLRKQTPLHLAAEAGQLQVCKLLL---DLGASIDATDDQGQKPIHVAAQNNFPEVAQI 632
             T  K++  +      +  + + L     +   ++A D  G   +++AA+     +   
Sbjct: 218 SGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDA 277

Query: 633 FLRAHPSLVTATTKEKERAKDLIAAG 658
            L           K   R  D   AG
Sbjct: 278 LLDYGAD-PFIANKSGLRPVDF-GAG 301

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 80.5 bits (197), Expect = 7e-17
 Identities = 43/318 (13%), Positives = 94/318 (29%), Gaps = 49/318 (15%)

Query: 39  TMLNNHARVDVFDQEGRSALHLAAEHGYL----KVCDALLTHKAFINSKS-RVGRTALHL 93
            ++       V D E +  L    +        ++  +L    +  NS+     +   H+
Sbjct: 20  KIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 79

Query: 94  AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 153
           +  +   ++     +    +   +     TPLH       L++ K L+  G++    D+ 
Sbjct: 80  SFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNM 139

Query: 154 GQKPIHVAAQNNFPEVAQIFLRAHPSL---VTATTKDGNTCAHIAAMQGSVGVIEELMKF 210
           G+  +  A ++     +  F      L   +        T  H   +   +       K+
Sbjct: 140 GESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKY 199

Query: 211 DRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHN 270
                            +    +  +  +                   +  +       +
Sbjct: 200 YLD------------ILMGWIVKKQNRPIQSG-----------TNEKESKPNDKNGERKD 236

Query: 271 QVLEEM----RSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGAS 326
            +LE +      +  LN      G T L++AA  G    V  LL +           GA 
Sbjct: 237 SILENLDLKWIIANMLNAQDSN-GDTCLNIAARLGNISIVDALLDY-----------GAD 284

Query: 327 FLGELGSESGMTPLHLAA 344
               + ++SG+ P+   A
Sbjct: 285 P--FIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.3 bits (129), Expect = 3e-08
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 10  ISKALNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAA 62
           I+  LN Q S G T L IA   G++ +V+ +L+  A   + ++ G   +   A
Sbjct: 248 IANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.8 bits (107), Expect = 1e-05
 Identities = 13/87 (14%), Positives = 33/87 (37%)

Query: 547 GRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS 606
            +   H++  +   ++     +    +   +     TPLH       L++ K L+  G++
Sbjct: 73  NQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN 132

Query: 607 IDATDDQGQKPIHVAAQNNFPEVAQIF 633
               D+ G+  +  A ++     +  F
Sbjct: 133 RLYGDNMGESCLVKAVKSVNNYDSGTF 159

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  106 bits (264), Expect = 8e-26
 Identities = 51/239 (21%), Positives = 95/239 (39%), Gaps = 18/239 (7%)

Query: 404 NGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
           +       A + G  + V  LL +GA+IN  +  G  ++H A    +V ++  L++ G  
Sbjct: 39  DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98

Query: 464 VDVTTNNLACGHVTVVGLLLSRAADLLQ-------SADKNGKTCLHIAATHGHLQMVEVL 516
           ++   N                 A+ L        + +  G T L IA      ++++  
Sbjct: 99  INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158

Query: 517 LGQ----------GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
           + +            E          L +        ++ G TALH+AA  GY ++ + L
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218

Query: 567 VHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNN 625
           +     V +I      TPLH AA  G+ + C++L++    ++A +  GQ    VA ++ 
Sbjct: 219 IQARYDV-NIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI 276

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 96.3 bits (238), Expect = 2e-22
 Identities = 62/263 (23%), Positives = 104/263 (39%), Gaps = 11/263 (4%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
                L AC+ G  E V  +L   A ++  + +G +ALH A     + +   L+ + A I
Sbjct: 40  DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI 99

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           N     G   LH AA  GY D+  +L+   A V  + +           EA +  +   +
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159

Query: 141 LDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGS 200
              G  I+A   + ++ +           A+ +L +         K G T  H+AA +G 
Sbjct: 160 NRQGVDIEAARKEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGY 211

Query: 201 VGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTA 260
             V++ L++      I   +  T   PL  AA  G     R+LV+        NK G TA
Sbjct: 212 TEVLKLLIQARYDVNIKDYDGWT---PLHAAAHWGKEEACRILVENLCDMEAVNKVGQTA 268

Query: 261 VHLAAQNGHNQVLEEMRSSKALN 283
             +A ++    + E  +    L+
Sbjct: 269 FDVADEDILGYLEELQKKQNLLH 291

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 89.8 bits (221), Expect = 4e-20
 Identities = 59/300 (19%), Positives = 107/300 (35%), Gaps = 50/300 (16%)

Query: 217 SARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEM 276
             + +  +      A   G    V  L++ GA     N  G TA+H A  + +  +++ +
Sbjct: 33  KTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFL 92

Query: 277 RSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESG 336
             + A        G   LH AA  G  D    L+S        +               G
Sbjct: 93  VENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNS-------------EG 139

Query: 337 MTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAAD 396
            TPL +A     E +++  +N  GV ++A  +E     L  A            L+    
Sbjct: 140 DTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQW---------LNSGHI 190

Query: 397 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINT 456
                 K+G T LH+AA  G+ +++++L+    ++N  D  G   +H AA +G       
Sbjct: 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRI 250

Query: 457 LLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAA--THGHLQMVE 514
           L++    ++                            +K G+T   +A     G+L+ ++
Sbjct: 251 LVENLCDMEAV--------------------------NKVGQTAFDVADEDILGYLEELQ 284

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 82.1 bits (201), Expect = 2e-17
 Identities = 50/302 (16%), Positives = 105/302 (34%), Gaps = 61/302 (20%)

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT 182
                A  +G  +    LL+ GA I+  +  G   +H A  ++  ++ +  +    ++  
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQ 101

Query: 183 ATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV 242
              +        A+                                       + ++   
Sbjct: 102 PDNEGWIPLHAAASCG-------------------------------------YLDIAEY 124

Query: 243 LVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQ 302
           L+  GA     N  G T + +A +    ++L+   + + +++ + +              
Sbjct: 125 LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAAR------KEEERIML 178

Query: 303 ADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQ 362
            D  + L S     V+               +SG T LH+AA  G   V++LL   A   
Sbjct: 179 RDARQWLNSGHINDVRHA-------------KSGGTALHVAAAKGYTEVLKLL-IQARYD 224

Query: 363 VDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAA--THGHLQM 420
           V+ +   +G+ PLH A   G      +L+    D+ ++ +K G+T   +A     G+L+ 
Sbjct: 225 VNIK-DYDGWTPLHAAAHWGKEEACRILVENLCDM-EAVNKVGQTAFDVADEDILGYLEE 282

Query: 421 VE 422
           ++
Sbjct: 283 LQ 284

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 74.8 bits (182), Expect = 5e-15
 Identities = 22/89 (24%), Positives = 44/89 (49%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
             +    G T L +A  +G+ E++  ++     V++ D +G + LH AA  G  + C  L
Sbjct: 192 DVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADL 102
           + +   + + ++VG+TA  +A  +    L
Sbjct: 252 VENLCDMEAVNKVGQTAFDVADEDILGYL 280

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 72.8 bits (177), Expect = 2e-14
 Identities = 55/222 (24%), Positives = 88/222 (39%), Gaps = 28/222 (12%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N     G T L  AC   ++++V  ++ N A ++  D EG   LH AA  GYL + + L
Sbjct: 66  INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYL 125

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAA--------------------- 112
           ++  A + + +  G T L +A      +L +  V+                         
Sbjct: 126 ISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWL 185

Query: 113 -----VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFP 167
                          T LH+AA  G  +V KLL+     ++  D  G  P+H AA     
Sbjct: 186 NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKE 245

Query: 168 EVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMK 209
           E  +I +      + A  K G T   +A  +  +G +EEL K
Sbjct: 246 EACRILVENLCD-MEAVNKVGQTAFDVAD-EDILGYLEELQK 285

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 70.9 bits (172), Expect = 9e-14
 Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 5/134 (3%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALL 74
           N+Q                 +    + + H       + G +ALH+AA  GY +V   L+
Sbjct: 160 NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI 219

Query: 75  THKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL 134
             +  +N K   G T LH AA  G  + CR LV ++   ++ +    QT   +A E    
Sbjct: 220 QARYDVNIKDYDGWTPLHAAAHWGKEEACRILV-ENLCDMEAVNKVGQTAFDVADE---- 274

Query: 135 QVCKLLLDLGASID 148
            +   L +L    +
Sbjct: 275 DILGYLEELQKKQN 288

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 47.8 bits (112), Expect = 4e-06
 Identities = 10/56 (17%), Positives = 22/56 (39%)

Query: 583 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHP 638
                A  +G  +    LL+ GA I+  +  G   +H A  ++  ++ +  +    
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGA 97

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 6e-25
 Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 7/220 (3%)

Query: 58  LHLAAEHGYLK-VCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDI 116
           +   A  G L+ + +++L  K+      +  RTALH A   G+ +     +      ++ 
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTE-IVEFLLQLGVPVND 65

Query: 117 LTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA 176
                 +PLH+AA AG+ ++ K LL  GA ++A +  G  P+H AA  N  E+A + L  
Sbjct: 66  KDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 125

Query: 177 HPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGH 236
             +   A      T  H AA +G++ +I  L+ +  S  I         TPL LA +   
Sbjct: 126 GAN-PDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGN---TPLHLACDEER 181

Query: 237 ANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEM 276
               ++LV  GAS   ENK   T + +A   G   +L+ M
Sbjct: 182 VEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRM 220

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (248), Expect = 3e-24
 Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 45/260 (17%)

Query: 375 LHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT 434
           +    + G +  +   +     L    D++ +T LH A + GH ++VE LL  G  +N  
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 435 DKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSAD 494
           D  G   +H AA  G   I+  LL KG +V+                            +
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAV--------------------------N 100

Query: 495 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLA 554
           +NG T LH AA+    ++  +LL  GA  +A D                     TA+H A
Sbjct: 101 QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHY-----------------EATAMHRA 143

Query: 555 AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQG 614
           A  G   +   L++  A   +I      TPLHLA +  +++  KLL+  GASI   + + 
Sbjct: 144 AAKGNLKMIHILLYYKA-STNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEE 202

Query: 615 QKPIHVAAQNNFPEVAQIFL 634
           + P+ VA       + +  +
Sbjct: 203 KTPLQVAK-GGLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (239), Expect = 4e-23
 Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 7/222 (3%)

Query: 25  LLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSK 83
           +      G +E +   +    +     DQ+ R+ALH A   G+ ++ + LL     +N K
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 84  SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 143
              G + LH+AA  G  ++ + L+    A ++ +     TPLH AA   + ++  +LL+ 
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKG-AQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 125

Query: 144 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGV 203
           GA+ DA D      +H AA           L  + +       +GNT  H+A  +  V  
Sbjct: 126 GANPDAKDHYEATAMHRAAAKGN-LKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEE 184

Query: 204 IEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVK 245
            + L+    S  I   N+  E TPLQ+A  GG   +++ +V+
Sbjct: 185 AKLLVSQGAS--IYIENK-EEKTPLQVAK-GGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (239), Expect = 5e-23
 Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 25/232 (10%)

Query: 294 LHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVR 353
           +   AY G+ + ++E +                       +   T LH A  +G+  +V 
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATR------------TDQDSRTALHWACSAGHTEIVE 54

Query: 354 LLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAA 413
                          + G++PLH+A   G   +V  LL + A +  + ++NG T LH AA
Sbjct: 55  F--LLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQV-NAVNQNGCTPLHYAA 111

Query: 414 THGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNN--- 470
           +    ++  +LL  GA  +A D   A ++H AA  G++ +I+ LL      ++       
Sbjct: 112 SKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNT 171

Query: 471 -----LACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 517
                     V    LL+S+ A  +   +K  KT L +A   G   +++ ++
Sbjct: 172 PLHLACDEERVEEAKLLVSQGAS-IYIENKEEKTPLQVAK-GGLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (217), Expect = 3e-20
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 3/196 (1%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
             +      T L  AC+ GH E+V  +L     V+  D  G S LH+AA  G  ++  AL
Sbjct: 30  ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKAL 89

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           L   A +N+ ++ G T LH AA     ++   L+ +  A  D     + T +H AA  G 
Sbjct: 90  LGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL-EGGANPDAKDHYEATAMHRAAAKGN 148

Query: 134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAH 193
           L++  +LL   AS +  D +G  P+H+A      E A++ +    S +    K+  T   
Sbjct: 149 LKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGAS-IYIENKEEKTPLQ 207

Query: 194 IAAMQGSVGVIEELMK 209
           +A   G   +++ +++
Sbjct: 208 VAK-GGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.2 bits (207), Expect = 9e-19
 Identities = 45/233 (19%), Positives = 91/233 (39%), Gaps = 19/233 (8%)

Query: 125 LHLAAEAGQLQ-VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTA 183
           +   A +G+L+ + + +L   +    TD   +  +H A      E+ +  L+    +   
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 184 TTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVL 243
                +     A+      V   L K  +   ++        TPL  AA      +  +L
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGC----TPLHYAASKNRHEIAVML 122

Query: 244 VKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQA 303
           ++ GA+   ++    TA+H AA  G+ +++  +   KA        G T LH+A    + 
Sbjct: 123 LEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERV 182

Query: 304 DTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLL 356
           +  + L+S            GAS    + ++   TPL +A   G   +++ ++
Sbjct: 183 EEAKLLVSQ-----------GASI--YIENKEEKTPLQVAKG-GLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.5 bits (187), Expect = 3e-16
 Identities = 50/230 (21%), Positives = 82/230 (35%), Gaps = 48/230 (20%)

Query: 228 LQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK 287
             LA  G    +   ++   +  T  ++   TA+H A   GH +++E +           
Sbjct: 8   CNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD 67

Query: 288 KLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSG 347
             G + LH+AA  G+ + V+ LL         +             ++G TPLH AA   
Sbjct: 68  DAGWSPLHIAASAGRDEIVKALLGKGAQVNAVN-------------QNGCTPLHYAASKN 114

Query: 348 NENVVRLLLNSAGVQVDAQTQE--------------------------------NGYNPL 375
              +  +LL   G   DA+                                    G  PL
Sbjct: 115 RHEIAVMLL-EGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPL 173

Query: 376 HLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 425
           HLAC    V    LL+S+ A +    +K  KT L +A   G   +++ ++
Sbjct: 174 HLACDEERVEEAKLLVSQGASI-YIENKEEKTPLQVAK-GGLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (157), Expect = 3e-12
 Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 27/215 (12%)

Query: 467 TTNNLAC-----GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 521
            +N + C     G +  +   +     L    D++ +T LH A + GH ++         
Sbjct: 2   VSNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEI--------- 52

Query: 522 EINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRK 581
                    + LL     +N K   G + LH+AA  G  ++ + L+   A  ++ +    
Sbjct: 53  --------VEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA-QVNAVNQNG 103

Query: 582 QTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV 641
            TPLH AA   + ++  +LL+ GA+ DA D      +H AA           L  + +  
Sbjct: 104 CTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGN-LKMIHILLYYKAST 162

Query: 642 TATTKEKERAKDLIAAGKHCEGMATELLALAAGAD 676
                E      L    +  E    +LL ++ GA 
Sbjct: 163 NIQDTEGNTPLHLACDEERVE--EAKLL-VSQGAS 194

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.0 bits (216), Expect = 5e-20
 Identities = 51/229 (22%), Positives = 87/229 (37%), Gaps = 12/229 (5%)

Query: 53  EGRSALHLAAEHGYLKVCDALLT----HKAFINSKSRVGRTALHLAAMNGYADLCRFLVH 108
           +G + LH+A   G L     L+         ++  + + +T LHLA +     + R  + 
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRL-LV 60

Query: 109 DHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ----GQKPIHVAAQN 164
              A    L    QT  HLA E       + LLD  A      +     G   +HVA   
Sbjct: 61  TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 120

Query: 165 NFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTE 224
              E  Q+ L     +     K G +    A    S+ +++ L++    G        + 
Sbjct: 121 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH---GANVNAQMYSG 177

Query: 225 ATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVL 273
           ++ L  A+  G   +VR LV++GA  + +N    T + +A       +L
Sbjct: 178 SSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.5 bits (207), Expect = 8e-19
 Identities = 56/266 (21%), Positives = 96/266 (36%), Gaps = 42/266 (15%)

Query: 369 ENGYNPLHLACFGGHVTVVGLLLSRAADL---LQSADKNGKTCLHIAATHGHLQMVEVLL 425
           E+G  PLH+A   G++  V  L++        L   +   +T LH+A       +V +L+
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 60

Query: 426 GQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSR 485
             GA   A D+ G  + H A  +     +  LL       +                   
Sbjct: 61  TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY------------ 108

Query: 486 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSR 545
                     +G T LH+A      + V++LL +GA+I+A D                  
Sbjct: 109 ----------DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSG-------------- 144

Query: 546 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA 605
             R+ L  A  N    + + L   H A ++       + LH A+  G L + + L+  GA
Sbjct: 145 --RSPLIHAVENNSLSMVQLL-LQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA 201

Query: 606 SIDATDDQGQKPIHVAAQNNFPEVAQ 631
                +     P+ VA      ++ +
Sbjct: 202 DSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.6 bits (202), Expect = 4e-18
 Identities = 54/246 (21%), Positives = 86/246 (34%), Gaps = 34/246 (13%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLN---SAGVQVDAQTQENGYNPLHLACFGGHVTVVGLL 390
           E G TPLH+A   GN   V  L+N     G ++D         PLHLA      +VV LL
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN-NLRQTPLHLAVITTLPSVVRLL 59

Query: 391 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKG----GARSIHTAA 446
           ++  A  +           H+A  H     +  LL   A      +     G  ++H A 
Sbjct: 60  VTAGASPMALDRHGQTAA-HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 118

Query: 447 RYGHVGIINTLLQKGEKVDVTTNNL--------ACGHVTVVGLLLSRAADLLQSADKNGK 498
                  +  LL++G  +D                 +   +  LL +    + +   +G 
Sbjct: 119 NTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGS 178

Query: 499 TCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG 558
           + LH A+  G L +V  L+  GA+ +  +                     T L +A    
Sbjct: 179 SALHSASGRGLLPLVRTLVRSGADSSLKNC-----------------HNDTPLMVARSRR 221

Query: 559 YADLCR 564
             D+ R
Sbjct: 222 VIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.0 bits (198), Expect = 1e-17
 Identities = 54/233 (23%), Positives = 91/233 (39%), Gaps = 15/233 (6%)

Query: 226 TPLQLAAEGGHANVVRVLVK----AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281
           TPL +A   G+   V  LV      G      N    T +HLA       V+  + ++ A
Sbjct: 5   TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64

Query: 282 LNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLH 341
             +   + G TA H+A        +R LL                      +  G+T LH
Sbjct: 65  SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEAR---------NYDGLTALH 115

Query: 342 LAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSA 401
           +A  +  +  V+LLL            ++G +PL  A     +++V LLL   A++  + 
Sbjct: 116 VAVNTECQETVQLLLERGADIDA-VDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQ 173

Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGII 454
             +G + LH A+  G L +V  L+  GA+ +  +      +  A     + I+
Sbjct: 174 MYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (186), Expect = 5e-16
 Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 10/228 (4%)

Query: 87  GRTALHLAAMNGYADLCRFLV---HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 143
           G T LH+A + G       LV         +DI    +QTPLHLA       V +LL+  
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62

Query: 144 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA---HPSLVTATTKDGNTCAHIAAMQGS 200
           GAS  A D  GQ   H+A ++  P   +  L +       + A   DG T  H+A     
Sbjct: 63  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122

Query: 201 VGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTA 260
              ++ L++          +  +  +PL  A E    ++V++L++ GA+   +  +G +A
Sbjct: 123 QETVQLLLERGADIDA--VDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSA 180

Query: 261 VHLAAQNGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVR 307
           +H A+  G   ++  +  S A +   K     T L VA      D +R
Sbjct: 181 LHSASGRGLLPLVRTLVRSGA-DSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (143), Expect = 2e-10
 Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 4/161 (2%)

Query: 15  NKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQ----EGRSALHLAAEHGYLKVC 70
                 G T   +AC       +  +L++ A   +  +    +G +ALH+A      +  
Sbjct: 67  MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 126

Query: 71  DALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAE 130
             LL   A I++       +  + A+   +     L+  H A ++       + LH A+ 
Sbjct: 127 QLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASG 186

Query: 131 AGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQ 171
            G L + + L+  GA     +     P+ VA      ++ +
Sbjct: 187 RGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (135), Expect = 2e-09
 Identities = 52/273 (19%), Positives = 89/273 (32%), Gaps = 50/273 (18%)

Query: 152 DQGQKPIHVAAQNNFPEVAQIFLRAHPSL---VTATTKDGNTCAHIAAMQGSVGVIEELM 208
           + G  P+H+A            +         +        T  H+A +     V+  L+
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 60

Query: 209 KFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNG 268
               S +   R+  T A     A E      +R L+ + A  T + +             
Sbjct: 61  TAGASPMALDRHGQTAAHL---ACEHRSPTCLRALLDSAAPGTLDLE------------- 104

Query: 269 HNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFL 328
                                G+TALHVA      +TV+ LL         D        
Sbjct: 105 ----------------ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIK------ 142

Query: 329 GELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVG 388
                 SG +PL  A  + + ++V+LLL             +G + LH A   G + +V 
Sbjct: 143 ------SGRSPLIHAVENNSLSMVQLLLQHG--ANVNAQMYSGSSALHSASGRGLLPLVR 194

Query: 389 LLLSRAADLLQSADKNGKTCLHIAATHGHLQMV 421
            L+   AD     + +  T L +A +   + ++
Sbjct: 195 TLVRSGAD-SSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (107), Expect = 7e-06
 Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 3/94 (3%)

Query: 547 GRTALHLAAMNGYADLCRFLV---HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 603
           G T LH+A + G       LV         +DI    +QTPLHLA       V +LL+  
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62

Query: 604 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH 637
           GAS  A D  GQ   H+A ++  P   +  L + 
Sbjct: 63  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSA 96

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 87.2 bits (214), Expect = 8e-20
 Identities = 48/228 (21%), Positives = 82/228 (35%), Gaps = 10/228 (4%)

Query: 409 LHIAATHGHLQMVEVLL-GQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVT 467
           LH A        V+ LL  + + +   D+ G   +H +  +    I + LL K E V++ 
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 63

Query: 468 TNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATD 527
                 G             ++++S             T+  +  +       A      
Sbjct: 64  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCL-----HLAVGKKWF 118

Query: 528 KVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHL 587
           +V   L+ + A +  K +  +  LH AA  G   L   L     + ++    +  TPL  
Sbjct: 119 EVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH 178

Query: 588 AAEAGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           A   G      LL++  GA  D  D++G K   VA      +V + FL
Sbjct: 179 ALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFL 223

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 77.2 bits (188), Expect = 2e-16
 Identities = 46/272 (16%), Positives = 81/272 (29%), Gaps = 44/272 (16%)

Query: 338 TPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADL 397
            PLH A        V+ LL+S    +  +  ++G  PLH +                   
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKD-QDGRIPLHWSVSFQAH------------- 47

Query: 398 LQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTL 457
                           +      ++                  ++          +   L
Sbjct: 48  ---------EITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL 98

Query: 458 LQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 517
            +   +     +         V   L      ++  DK  +  LH AA+ G L+++E+L 
Sbjct: 99  NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 158

Query: 518 GQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDIL 577
           G G                K+ +N + + G T L  A   G+ D    LV  + A  D++
Sbjct: 159 GLG----------------KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLV 202

Query: 578 TLRKQTPLHLAAEAGQLQVCKLLLDLGASIDA 609
             +      +A      QV K  L+     DA
Sbjct: 203 DNKGAKAEDVAL---NEQVKKFFLNNVV--DA 229

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.8 bits (187), Expect = 3e-16
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 12/232 (5%)

Query: 23  TPLLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFIN 81
            PL  AC       V  +L++  + +   DQ+GR  LH +      ++   LL+    +N
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 82  SKSRVGRTALHLAAMNGYADLCRFL----VHDHAAVIDILTLRKQTPLHLAAEAGQLQVC 137
                  +      +         +           ++ +T +  T LHLA      +V 
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 138 KLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAM 197
           + L++ GAS+   D   Q P+H AA     ++ ++      S V    K G T    A  
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181

Query: 198 QGSVGVIEELMKFDRSGV-ISARNRVTEATPLQLAAEGGHANVVRVLVKAGA 248
           +G       L+  ++ G      +    A    +A    +  V +  +    
Sbjct: 182 EGHGDAAVLLV--EKYGAEYDLVDN-KGAKAEDVAL---NEQVKKFFLNNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.9 bits (164), Expect = 4e-13
 Identities = 36/227 (15%), Positives = 63/227 (27%), Gaps = 6/227 (2%)

Query: 89  TALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID 148
             LH A M       + L+H   +++       + PLH +      ++   LL    +++
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 149 ATDDQGQKPIHVAAQNNF-PEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL 207
             D                  +  +       L     K  N       +       E  
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 208 MKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASC-TDENKTGFTAVHLAAQ 266
                +G            PL  AA  G   ++ +L   G S    ++K G+T +  A  
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181

Query: 267 NGHNQVLEEMRSSKALNVYSK-KLGVTALHVAAYFGQADTVRELLSH 312
            GH      +              G  A  VA         +  L++
Sbjct: 182 EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNN 225

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.5 bits (163), Expect = 4e-13
 Identities = 36/230 (15%), Positives = 67/230 (29%), Gaps = 30/230 (13%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDE-NKTGFTAVHLAAQNGHNQVLEEMRSSKALNV 284
            PL  A        V+ L+ +  S   + ++ G   +H +     +++   + S      
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 285 YSKKLGVTALHVAAYFGQADTVREL-------------------LSHVPGTVKSDPPTGA 325
                  +             +  +                   ++ +   V       +
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 326 SFLGELG------SESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLAC 379
            FL E G       +    PLH AA  G+  ++ LL    G        + G+ PL  A 
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL-CGLGKSAVNWQDKQGWTPLFHAL 180

Query: 380 FGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA 429
             GH     LL+ +        D  G     +A    + Q+ +  L    
Sbjct: 181 AEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.3 bits (139), Expect = 7e-10
 Identities = 40/200 (20%), Positives = 69/200 (34%), Gaps = 42/200 (21%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNN------------------------------ 43
           L ++   G  PL  + +    E+ + +L+                               
Sbjct: 27  LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVV 86

Query: 44  --------HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAA 95
                      ++    +G + LHLA    + +V   L+ + A +  K +  +  LH AA
Sbjct: 87  KSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAA 146

Query: 96  MNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD-LGASIDATDDQG 154
             G   L   L     + ++    +  TPL  A   G      LL++  GA  D  D++G
Sbjct: 147 SVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKG 206

Query: 155 QKPIHVAAQNNFPEVAQIFL 174
            K   VA      +V + FL
Sbjct: 207 AKAEDVALNE---QVKKFFL 223

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.1 bits (136), Expect = 2e-09
 Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 31/231 (13%)

Query: 471 LAC--GHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK 528
            AC       V  LL     LL   D++G+  LH + +    ++   LL +   +N  D 
Sbjct: 6   QACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDY 65

Query: 529 VCDALLTHKAFINSK---------------------SRVGRTALHLAAMNGYADLCRFLV 567
             D+  T      S                      +  G T LHLA    + ++ +FL+
Sbjct: 66  PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLI 125

Query: 568 HDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG-ASIDATDDQGQKPIHVAAQNNF 626
            + A+V        Q PLH AA  G L++ +LL  LG ++++  D QG  P+  A     
Sbjct: 126 ENGASVRIK-DKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH 184

Query: 627 PEVAQIFLRAHPSLVTATTKEKERAKDLIAAGKHCEGMATELLALAAGADS 677
            + A + +  + +       +  +A+D +A  +       +   L    D+
Sbjct: 185 GDAAVLLVEKYGAEYDLVDNKGAKAED-VALNEQV----KKFF-LNNVVDA 229

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.4 bits (129), Expect = 1e-08
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 6/129 (4%)

Query: 22  WTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTH-KAFI 80
            T L +A  +   E+   ++ N A V + D+  +  LH AA  G LK+ + L    K+ +
Sbjct: 106 VTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAV 165

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           N + + G T L  A   G+ D    LV  + A  D++  +      +A      QV K  
Sbjct: 166 NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFF 222

Query: 141 LDLGASIDA 149
           L+     DA
Sbjct: 223 LNNVV--DA 229

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.7 bits (114), Expect = 9e-07
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 583 TPLHLAAEAGQLQVCKLLLDL-GASIDATDDQGQKPIHVAAQNN 625
            PLH A    +    + LL    + +   D  G+ P+H +    
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQ 45

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 82.5 bits (202), Expect = 3e-18
 Identities = 58/215 (26%), Positives = 86/215 (40%), Gaps = 11/215 (5%)

Query: 419 QMVEVLLGQGAEINAT-DKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVT 477
           Q++  LL QGAE+NAT DK G  S+H AAR+        LL  G   +   N        
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 478 VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHK 537
            V         +L               T   +              A + + + L+T  
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILA---------ARLAIEGMVEDLITAD 113

Query: 538 AFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVC 597
           A IN+    G+TALH AA     +     +  H A  D    + +TPL LAA  G  +  
Sbjct: 114 ADINAADNSGKTALHWAAAVNNTEAVNI-LLMHHANRDAQDDKDETPLFLAAREGSYEAS 172

Query: 598 KLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI 632
           K LLD  A+ + TD   + P  VA++    ++ ++
Sbjct: 173 KALLDNFANREITDHMDRLPRDVASERLHHDIVRL 207

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 75.6 bits (184), Expect = 5e-16
 Identities = 42/208 (20%), Positives = 71/208 (34%), Gaps = 5/208 (2%)

Query: 68  KVCDALLTHKAFINSKS-RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLH 126
           +V   LL   A +N+   + G T+LHLAA    AD  + L+   A         +     
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 127 LAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTK 186
             A    + V ++LL   A+             + A     E     L    + + A   
Sbjct: 63  AVAA-DAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADN 121

Query: 187 DGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKA 246
            G T  H AA   +   +  L+    +         T   PL LAA  G     + L+  
Sbjct: 122 SGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDET---PLFLAAREGSYEASKALLDN 178

Query: 247 GASCTDENKTGFTAVHLAAQNGHNQVLE 274
            A+    +        +A++  H+ ++ 
Sbjct: 179 FANREITDHMDRLPRDVASERLHHDIVR 206

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 67.5 bits (163), Expect = 3e-13
 Identities = 45/222 (20%), Positives = 76/222 (34%), Gaps = 17/222 (7%)

Query: 135 QVCKLLLDLGASIDAT-DDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAH 193
           QV   LL  GA ++AT D  G+  +H+AA+    + A+  L A     +           
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 194 IAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDE 253
             A          L     +      +  T               +V  L+ A A     
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAA---RLAIEGMVEDLITADADINAA 119

Query: 254 NKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHV 313
           + +G TA+H AA   + + +  +    A          T L +AA  G  +  + LL + 
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDN- 178

Query: 314 PGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLL 355
                      A+   E+       P  +A+   + ++VRLL
Sbjct: 179 ----------FANR--EITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 67.5 bits (163), Expect = 4e-13
 Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 5/210 (2%)

Query: 35  ELVNTMLNNHARVDV-FDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHL 93
           ++++ +L   A ++   D+ G ++LHLAA          LL   A  NS+   GRT LH 
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 94  AAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQ 153
           A       + + L+ + A  ++       TPL LAA      + + L+   A I+A D+ 
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 154 GQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRS 213
           G+  +H AA  N  E   I L  H +   A      T   +AA +GS    + L+    +
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHAN-RDAQDDKDETPLFLAAREGSYEASKALLDNFAN 181

Query: 214 GVISARNRVTEATPLQLAAEGGHANVVRVL 243
                 +   +  P  +A+E  H ++VR+L
Sbjct: 182 --REITDH-MDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 67.1 bits (162), Expect = 5e-13
 Identities = 49/222 (22%), Positives = 78/222 (35%), Gaps = 16/222 (7%)

Query: 237 ANVVRVLVKAGASC-TDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALH 295
           A V+  L+  GA      +KTG T++HLAA+       + +  + A        G T LH
Sbjct: 2   AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLH 61

Query: 296 VAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLL 355
            A         + LL +    + +                  T   + A       +   
Sbjct: 62  AAVAADAMGVFQILLRNRATNLNARMHD-------------GTTPLILAARLAIEGMVED 108

Query: 356 LNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH 415
           L +A   ++A    +G   LH A    +   V +LL   A+   + D   +T L +AA  
Sbjct: 109 LITADADINAAD-NSGKTALHWAAAVNNTEAVNILLMHHANR-DAQDDKDETPLFLAARE 166

Query: 416 GHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTL 457
           G  +  + LL   A    TD         A+   H  I+  L
Sbjct: 167 GSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 65.6 bits (158), Expect = 2e-12
 Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 35/191 (18%)

Query: 16  KQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGY--------- 66
                G T L +A      +    +L+  A  +  D  GR+ LH A              
Sbjct: 18  TMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLR 77

Query: 67  -------------------------LKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD 101
                                      + + L+T  A IN+    G+TALH AA     +
Sbjct: 78  NRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTE 137

Query: 102 LCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA 161
                +  H A  D    + +TPL LAA  G  +  K LLD  A+ + TD   + P  VA
Sbjct: 138 AVNI-LLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVA 196

Query: 162 AQNNFPEVAQI 172
           ++    ++ ++
Sbjct: 197 SERLHHDIVRL 207

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 64.4 bits (155), Expect = 4e-12
 Identities = 27/93 (29%), Positives = 41/93 (44%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N   + G T L  A    + E VN +L +HA  D  D +  + L LAA  G  +   AL
Sbjct: 116 INAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKAL 175

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 106
           L + A       + R    +A+   + D+ R L
Sbjct: 176 LDNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (181), Expect = 1e-15
 Identities = 36/217 (16%), Positives = 68/217 (31%), Gaps = 8/217 (3%)

Query: 404 NGKTCLHIAATHGH----LQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQ 459
           +G + LH+A  H      ++++  + G  A +N  +      +H A       I   LL 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60

Query: 460 KGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ 519
            G   ++                   +  +L  +         + AT+ +      L   
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120

Query: 520 GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTL 579
                    V   +         +   GRTALHLA      DL   L+    A ++ +T 
Sbjct: 121 ---HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLK-CGADVNRVTY 176

Query: 580 RKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK 616
           +  +P  L       ++ + L  L         + + 
Sbjct: 177 QGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESED 213

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (168), Expect = 9e-14
 Identities = 43/215 (20%), Positives = 72/215 (33%), Gaps = 13/215 (6%)

Query: 226 TPLQLAAEGGHANVVRVLVK----AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKA 281
           + L LA       +   +++      A    +N    T +HLA      ++ E +  +  
Sbjct: 4   SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63

Query: 282 LNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLH 341
                                    +  L+ V    +S        + +  + +G T LH
Sbjct: 64  DPELRD-------FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 116

Query: 342 LAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSA 401
           LA+  G   +V LL  S G  V+AQ   NG   LHLA    +  +V LLL   AD+    
Sbjct: 117 LASIHGYLGIVELL-VSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV-NRV 174

Query: 402 DKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK 436
              G +   +       ++ + L     E      
Sbjct: 175 TYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLP 209

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.2 bits (167), Expect = 1e-13
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 6/204 (2%)

Query: 87  GRTALHLAAMNGYADLCRFLVH---DHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDL 143
           G + LHLA ++    L   ++       A ++     +QTPLHLA    Q ++ + LL  
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61

Query: 144 GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQ--GSV 201
           G   +  D +G  P+H+A +        +  ++  +    +            +      
Sbjct: 62  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121

Query: 202 GVIEELMKFDRSGVISARNRVTE-ATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTA 260
           G +  +      G            T L LA +  + ++V +L+K GA        G++ 
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP 181

Query: 261 VHLAAQNGHNQVLEEMRSSKALNV 284
             L       ++ +++      N+
Sbjct: 182 YQLTWGRPSTRIQQQLGQLTLENL 205

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (164), Expect = 3e-13
 Identities = 44/211 (20%), Positives = 71/211 (33%), Gaps = 13/211 (6%)

Query: 257 GFTAVHLAAQNGHNQVLEEMRS---SKALNVYSK-KLGVTALHVAAYFGQADTVRELLSH 312
           G + +HLA  +    +  E+          +  +  L  T LH+A    Q +    LL  
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61

Query: 313 VPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGY 372
                  D                         +    + +         +   T  NG+
Sbjct: 62  GCDPELRDFRGNTPL---------HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGH 112

Query: 373 NPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 432
             LHLA   G++ +V LL+S  AD+      NG+T LH+A    +  +V +LL  GA++N
Sbjct: 113 TCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN 172

Query: 433 ATDKGGARSIHTAARYGHVGIINTLLQKGEK 463
                G              I   L Q   +
Sbjct: 173 RVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (159), Expect = 1e-12
 Identities = 34/212 (16%), Positives = 70/212 (33%), Gaps = 12/212 (5%)

Query: 53  EGRSALHLAAEHGYLKVC----DALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH 108
           +G S LHLA  H    +       +    AF+N ++ + +T LHLA +    ++   L+ 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60

Query: 109 DHAAVIDILTLRKQTPLHLAAEAGQLQVCKL-----LLDLGASIDATDDQGQKPIHVAAQ 163
                                +     V  L        L + + AT+  G   +H+A+ 
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120

Query: 164 NNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVT 223
           + +  + ++ +     +      +G T  H+A    +    + +    + G    R    
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN---PDLVSLLLKCGADVNRVTYQ 177

Query: 224 EATPLQLAAEGGHANVVRVLVKAGASCTDENK 255
             +P QL        + + L +          
Sbjct: 178 GYSPYQLTWGRPSTRIQQQLGQLTLENLQMLP 209

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.3 bits (157), Expect = 2e-12
 Identities = 46/217 (21%), Positives = 76/217 (35%), Gaps = 36/217 (16%)

Query: 370 NGYNPLHLACFGGHVT----VVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL 425
           +G + LHLA           V+  +    A  L   +   +T LH+A      ++ E LL
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAF-LNFQNNLQQTPLHLAVITNQPEIAEALL 59

Query: 426 GQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNN--------------L 471
           G G +    D  G   +H A   G +  +  L Q      + +                 
Sbjct: 60  GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 119

Query: 472 ACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCD 531
             G++ +V LL+S  AD+      NG+T LH+A    +  +V +LL  GA++N       
Sbjct: 120 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTY--- 176

Query: 532 ALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVH 568
                          G +   L        + + L  
Sbjct: 177 --------------QGYSPYQLTWGRPSTRIQQQLGQ 199

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (156), Expect = 4e-12
 Identities = 36/199 (18%), Positives = 65/199 (32%), Gaps = 43/199 (21%)

Query: 21  GWTPLLIACNRGH----MELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVC------ 70
           G + L +A         ME++  +  + A ++  +   ++ LHLA      ++       
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61

Query: 71  ---------------------------------DALLTHKAFINSKSRVGRTALHLAAMN 97
                                                   + + + +  G T LHLA+++
Sbjct: 62  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121

Query: 98  GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKP 157
           GY  +   LV   A V        +T LHLA +     +  LLL  GA ++    QG  P
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP 181

Query: 158 IHVAAQNNFPEVAQIFLRA 176
             +        + Q   + 
Sbjct: 182 YQLTWGRPSTRIQQQLGQL 200

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (120), Expect = 2e-07
 Identities = 13/58 (22%), Positives = 23/58 (39%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKA 78
           G T L +A +  + +LV+ +L   A V+    +G S   L       ++   L     
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 202

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (105), Expect = 1e-05
 Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 2/129 (1%)

Query: 29  CNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRV-G 87
            + G +    T  + H+ +   +  G + LHLA+ HGYL + + L++  A +N++    G
Sbjct: 86  ASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNG 145

Query: 88  RTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASI 147
           RTALHLA      DL   L+    A ++ +T +  +P  L       ++ + L  L    
Sbjct: 146 RTALHLAVDLQNPDLVSLLLK-CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 204

Query: 148 DATDDQGQK 156
                + + 
Sbjct: 205 LQMLPESED 213

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (139), Expect = 2e-10
 Identities = 23/159 (14%), Positives = 42/159 (26%), Gaps = 10/159 (6%)

Query: 409 LHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTT 468
           L  AA  G L+ +  LL     +NA +  G  ++                          
Sbjct: 5   LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRL----------LL 54

Query: 469 NNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK 528
                      G  +   A      D         A  +       + L   A+      
Sbjct: 55  RGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRV 114

Query: 529 VCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLV 567
           V   +    + +  ++  G TA  LA + G  ++   + 
Sbjct: 115 VEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 153

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (131), Expect = 2e-09
 Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 8/155 (5%)

Query: 373 NPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEIN 432
           N L  A   G +  +  LL    ++  + +  G+T L +           +LL       
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKLGNPEIARRLLLRGANPDL 61

Query: 433 ATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLAC-------GHVTVVGLLLSR 485
               G A     A       +   L  + +                  GH+ VV  L+  
Sbjct: 62  KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 121

Query: 486 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 520
            A  +   +  G T   +A  +G  ++V ++   G
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (128), Expect = 6e-09
 Identities = 31/152 (20%), Positives = 54/152 (35%), Gaps = 4/152 (2%)

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT 182
             L  AA  G L+    LL    +++A +  G+  + V    N     ++ LR       
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGAN--PD 60

Query: 183 ATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV 242
              + G    H AA  G +  ++     +    ++  +          A EG    V  +
Sbjct: 61  LKDRTGFAVIHDAARAGFLDTLQ--TLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 118

Query: 243 LVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
           +    ++    N  G TA  LA   G N+V+ 
Sbjct: 119 VKHTASNVGHRNHKGDTACDLARLYGRNEVVS 150

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (127), Expect = 7e-09
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 2/154 (1%)

Query: 56  SALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVID 115
           + L  AA  G L+   +LL +   +N+++  GRT   L  M          +    A  D
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRT--ALQVMKLGNPEIARRLLLRGANPD 60

Query: 116 ILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR 175
           +        +H AA AG L   + LL+  A ++  D++G  P+H+AA+     V +  ++
Sbjct: 61  LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 120

Query: 176 AHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMK 209
              S V      G+T   +A + G   V+  +  
Sbjct: 121 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 154

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (123), Expect = 3e-08
 Identities = 31/149 (20%), Positives = 49/149 (32%), Gaps = 15/149 (10%)

Query: 501 LHIAATHGHLQMVEVLLGQGAEINATDK---------------VCDALLTHKAFINSKSR 545
           L  AA  G L+ +  LL     +NA +                +   LL   A  + K R
Sbjct: 5   LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDR 64

Query: 546 VGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA 605
            G   +H AA  G+ D  + L+   A V              A E     V  L+    +
Sbjct: 65  TGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 124

Query: 606 SIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           ++   + +G     +A      EV  +  
Sbjct: 125 NVGHRNHKGDTACDLARLYGRNEVVSLMQ 153

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 5e-07
 Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 1/152 (0%)

Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINS 82
             L  A  RG +E + ++L N+  V+  +  GR+AL +       ++   LL   A  + 
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNP-EIARRLLLRGANPDL 61

Query: 83  KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 142
           K R G   +H AA  G+ D  + L+   A V              A E     V  L+  
Sbjct: 62  KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 121

Query: 143 LGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 174
             +++   + +G     +A      EV  +  
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 153

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (108), Expect = 2e-06
 Identities = 32/163 (19%), Positives = 53/163 (32%), Gaps = 11/163 (6%)

Query: 442 IHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCL 501
           + +AA  G +  + +LLQ    V+            +                +  +  L
Sbjct: 5   LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-----------LGNPEIARRLL 53

Query: 502 HIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD 561
              A           +   A           LL  +A +N +   G   LHLAA  G+  
Sbjct: 54  LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR 113

Query: 562 LCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 604
           +  FLV   A+ +     +  T   LA   G+ +V  L+   G
Sbjct: 114 VVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (101), Expect = 2e-05
 Identities = 28/152 (18%), Positives = 42/152 (27%), Gaps = 22/152 (14%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
             L  AA  G    +  L++   +   +N  G TA+ +            +    A    
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIA-RRLLLRGANPDL 61

Query: 286 SKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLG---------------- 329
             + G   +H AA  G  DT++ LL         D                         
Sbjct: 62  KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 121

Query: 330 -----ELGSESGMTPLHLAAYSGNENVVRLLL 356
                   +  G T   LA   G   VV L+ 
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 153

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (101), Expect = 2e-05
 Identities = 25/154 (16%), Positives = 43/154 (27%), Gaps = 17/154 (11%)

Query: 292 TALHVAAYFGQADTVRELLSH-----------------VPGTVKSDPPTGASFLGELGSE 334
             L  AA  G  + +  LL +                 +                    +
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 335 SGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRA 394
                  +   +    +  L                G  PLHLA   GH+ VV  L+   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 395 ADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQG 428
           A  +   +  G T   +A  +G  ++V ++   G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (96), Expect = 9e-05
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 583 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIH 619
             L  AA  G L+    LL    +++A +  G+  + 
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQ 39

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.4 bits (134), Expect = 9e-10
 Identities = 28/160 (17%), Positives = 52/160 (32%), Gaps = 11/160 (6%)

Query: 407 TCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDV 466
             L  AA  G    V +L+  GA       G +     A           L     +   
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 467 TTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINAT 526
           T  +    H+              +      +  L   A      M+++     A  +  
Sbjct: 64  TKVDRTPLHMAAS-----------EGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNH 112

Query: 527 DKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFL 566
            +V + L+ + A ++++S+  +TA  ++  NG  DL   L
Sbjct: 113 QEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.6 bits (132), Expect = 2e-09
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT 182
             L  AA AGQ    ++L+  GA               A   +F     +          
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 183 ATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV 242
                       +    ++          + G       + + T L  A E  H  VV +
Sbjct: 64  TKVDRTPLHMAASEGHANIV-----EVLLKHGADVNAKDMLKMTALHWATEHNHQEVVEL 118

Query: 243 LVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
           L+K GA    ++K   TA  ++  NG+  + E
Sbjct: 119 LIKYGADVHTQSKFCKTAFDISIDNGNEDLAE 150

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.5 bits (129), Expect = 3e-09
 Identities = 26/148 (17%), Positives = 45/148 (30%), Gaps = 14/148 (9%)

Query: 499 TCLHIAATHGHLQMVEVLLGQGAEINATDK--------------VCDALLTHKAFINSKS 544
             L  AA  G    V +L+  GA                         +L          
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 545 RVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG 604
                     A +        ++  H A ++   + K T LH A E    +V +LL+  G
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 605 ASIDATDDQGQKPIHVAAQNNFPEVAQI 632
           A +       +    ++  N   ++A+I
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEI 151

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.1 bits (128), Expect = 5e-09
 Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 2/150 (1%)

Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINS 82
             LL A   G  + V  ++ N A        G S LHLAA++G+    + LL      ++
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWL-GTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 83  KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 142
           +++V RT LH+AA  G+A++    +  H A ++   + K T LH A E    +V +LL+ 
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEV-LLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIK 121

Query: 143 LGASIDATDDQGQKPIHVAAQNNFPEVAQI 172
            GA +       +    ++  N   ++A+I
Sbjct: 122 YGADVHTQSKFCKTAFDISIDNGNEDLAEI 151

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.4 bits (121), Expect = 4e-08
 Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 374 PLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA 433
            L  A   G    V +L++  A    + D  G + LH+AA +GH    EVLL  G   +A
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPF--TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 434 TDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNN--------LACGHVTVVGLLLSR 485
             K     +H AA  GH  I+  LL+ G  V+                 H  VV LL+  
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122

Query: 486 AADLLQSADKNGKTCLHIAATHGHLQMVEVL 516
            AD+  +  K  KT   I+  +G+  + E+L
Sbjct: 123 GADV-HTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.3 bits (113), Expect = 5e-07
 Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 3/155 (1%)

Query: 53  EGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAA 112
           +    L  AA  G       L+ + A       +G + LHLAA  G+      L+    +
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 113 VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQI 172
                T   +TPLH+AA  G   + ++LL  GA ++A D      +H A ++N  EV ++
Sbjct: 60  RDAR-TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVEL 118

Query: 173 FLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL 207
            ++     V   +K   T   I+   G+  + E L
Sbjct: 119 LIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.8 bits (109), Expect = 1e-06
 Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 18/150 (12%)

Query: 292 TALHVAAYFGQADTVRELLSH-------VPGTVKSDPPTGASFLGELGSESGMTPLHLAA 344
             L  AA  GQ D VR L+++         GT                          A 
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 345 YSGNENVVRLLLNSAGVQVDAQTQENGYNP----------LHLACFGGHVTVVGLLLSRA 394
              +   + +  +     +     ++G +           LH A    H  VV LL+   
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 395 ADLLQSADKNGKTCLHIAATHGHLQMVEVL 424
           AD+  +  K  KT   I+  +G+  + E+L
Sbjct: 124 ADV-HTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.0 bits (107), Expect = 3e-06
 Identities = 26/161 (16%), Positives = 55/161 (34%), Gaps = 12/161 (7%)

Query: 440 RSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKT 499
           + +  AAR G    +  L+  G          +  H+                     + 
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQ-----------YGHFSTTEV 52

Query: 500 CLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGY 559
            L    +      V+      A       + + LL H A +N+K  +  TALH A  + +
Sbjct: 53  LLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNH 112

Query: 560 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 600
            ++   L+  + A +   +   +T   ++ + G   + ++L
Sbjct: 113 QEVVE-LLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.0 bits (107), Expect = 3e-06
 Identities = 28/85 (32%), Positives = 48/85 (56%)

Query: 22  WTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFIN 81
            TPL +A + GH  +V  +L + A V+  D    +ALH A EH + +V + L+ + A ++
Sbjct: 68  RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127

Query: 82  SKSRVGRTALHLAAMNGYADLCRFL 106
           ++S+  +TA  ++  NG  DL   L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.6 bits (106), Expect = 4e-06
 Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 31/150 (20%)

Query: 338 TPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADL 397
             L  AA +G ++ VR+L+ + G              L         T V L    + D 
Sbjct: 4   KKLLEAARAGQDDEVRILM-ANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 398 LQSADKN------------------------------GKTCLHIAATHGHLQMVEVLLGQ 427
               D+                                 T LH A  H H ++VE+L+  
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122

Query: 428 GAEINATDKGGARSIHTAARYGHVGIINTL 457
           GA+++   K    +   +   G+  +   L
Sbjct: 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.5 bits (98), Expect = 5e-05
 Identities = 32/152 (21%), Positives = 51/152 (33%), Gaps = 25/152 (16%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
             L  AA  G  + VR+L+  GA     +  G + +HLAAQ GH    E +  +      
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPF-TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 286 SKKLGVTALHVA----------------------AYFGQADTVRELLSHVPGTVKSDPPT 323
             K+  T LH+A                                    +    V+     
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122

Query: 324 GASFLGELGSESGMTPLHLAAYSGNENVVRLL 355
           GA       S+   T   ++  +GNE++  +L
Sbjct: 123 GADV--HTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.5 bits (98), Expect = 5e-05
 Identities = 11/53 (20%), Positives = 23/53 (43%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
             T L  A    H E+V  ++   A V    +  ++A  ++ ++G   + + L
Sbjct: 100 KMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.2 bits (129), Expect = 4e-09
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 11/140 (7%)

Query: 292 TALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENV 351
            +L  A        + +  +      +  P          G E   T LHLA  S +   
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPL-------ANGHEPDETALHLAVRSVDRTS 60

Query: 352 VRL--LLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
           + +   L      +D QT +      +         +  LL  +A+  +   +++G+T L
Sbjct: 61  LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIA--NESGETPL 118

Query: 410 HIAATHGHLQMVEVLLGQGA 429
            IA    H    E+L    +
Sbjct: 119 DIAKRLKHEHCEELLTQALS 138

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.2 bits (129), Expect = 5e-09
 Identities = 26/166 (15%), Positives = 55/166 (33%), Gaps = 35/166 (21%)

Query: 373 NPLHLACFGGHVTVVGLLLSRAADL-----LQSADKNGKTCLHIAA---THGHLQMVEVL 424
           + L  A     +  +    +   DL     L +  +  +T LH+A        L +V+ L
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 425 LGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLS 484
           +     ++     G+ ++H      +   +  LL+    +++                  
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIA----------------- 110

Query: 485 RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGA-EINATDKV 529
                    +++G+T L IA    H    E+L    +   N+   V
Sbjct: 111 ---------NESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHV 147

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.2 bits (129), Expect = 5e-09
 Identities = 30/148 (20%), Positives = 53/148 (35%), Gaps = 16/148 (10%)

Query: 493 ADKNGK-TCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTAL 551
           AD   K   L  A     +  +      G ++     + +                 TAL
Sbjct: 1   ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANG-----------HEPDETAL 49

Query: 552 HLAAMN---GYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID 608
           HLA  +       +  FL   ++  +D  T +  T LH        +  KLLL   ASI+
Sbjct: 50  HLAVRSVDRTSLHIVDFL-VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE 108

Query: 609 ATDDQGQKPIHVAAQNNFPEVAQIFLRA 636
             ++ G+ P+ +A +       ++  +A
Sbjct: 109 IANESGETPLDIAKRLKHEHCEELLTQA 136

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.7 bits (125), Expect = 2e-08
 Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 10/139 (7%)

Query: 23  TPLLIACNRGHMELVNTMLNNHARVDV------FDQEGRSALHLAA---EHGYLKVCDAL 73
             L  A     +  +     +   +          +   +ALHLA    +   L + D L
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 74  LTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ 133
           + +   ++ ++  G TALH   +   A+  +  +    A I+I     +TPL +A     
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKL-LLRGKASIEIANESGETPLDIAKRLKH 126

Query: 134 LQVCKLLLDLGASIDATDD 152
               +LL    +    +  
Sbjct: 127 EHCEELLTQALSGRFNSHV 145

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.7 bits (120), Expect = 7e-08
 Identities = 22/147 (14%), Positives = 42/147 (28%), Gaps = 26/147 (17%)

Query: 474 GHVTVVGLLLSRAADL-----LQSADKNGKTCLHIAA---THGHLQMVEVLLGQGAEINA 525
             +  +    +   DL     L +  +  +T LH+A        L +V+ L+     ++ 
Sbjct: 17  RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK 76

Query: 526 TDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPL 585
                   L +                          C  L+    A I+I     +TPL
Sbjct: 77  QTGKGSTALHYC------------------CLTDNAECLKLLLRGKASIEIANESGETPL 118

Query: 586 HLAAEAGQLQVCKLLLDLGASIDATDD 612
            +A         +LL    +    +  
Sbjct: 119 DIAKRLKHEHCEELLTQALSGRFNSHV 145

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.5 bits (109), Expect = 2e-06
 Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 11/136 (8%)

Query: 121 KQTPLHLAAEAGQLQVCKLLLDLGASIDAT------DDQGQKPIHVAAQNNFPEVAQI-- 172
           K   L  A +   +         G  +          +  +  +H+A ++       I  
Sbjct: 6   KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVD 65

Query: 173 FLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAA 232
           FL  +   +   T  G+T  H   +       E L    R          +  TPL +A 
Sbjct: 66  FLVQNSGNLDKQTGKGSTALHYCCLTD---NAECLKLLLRGKASIEIANESGETPLDIAK 122

Query: 233 EGGHANVVRVLVKAGA 248
              H +   +L +A +
Sbjct: 123 RLKHEHCEELLTQALS 138

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.5 bits (109), Expect = 2e-06
 Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 3/105 (2%)

Query: 14  LNKQTSIGWTPLLIAC---NRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVC 70
           L        T L +A    +R  + +V+ ++ N   +D    +G +ALH        +  
Sbjct: 38  LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECL 97

Query: 71  DALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVID 115
             LL  KA I   +  G T L +A    +      L    +   +
Sbjct: 98  KLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN 142

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.1 bits (95), Expect = 1e-04
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 9/135 (6%)

Query: 187 DGNTCAHIAAMQGSVGVIEELMKFDRSGV-ISARNRVTEA-----TPLQLAA---EGGHA 237
           D     H          I  L++    GV ++ +  +        T L LA    +    
Sbjct: 2   DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61

Query: 238 NVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVA 297
           ++V  LV+   +   +   G TA+H      + + L+ +   KA    + + G T L +A
Sbjct: 62  HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 121

Query: 298 AYFGQADTVRELLSH 312
                      L   
Sbjct: 122 KRLKHEHCEELLTQA 136

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (123), Expect = 2e-08
 Identities = 22/127 (17%), Positives = 46/127 (36%), Gaps = 10/127 (7%)

Query: 407 TCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK--- 463
             L  ++  G   +V+ ++ +  + +  +  G  ++H A   GH  I+  L+Q G     
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 464 -----VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTC--LHIAATHGHLQMVEVL 516
                        +C +V V   L+   A +      + +T          G+ Q  + L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 517 LGQGAEI 523
            G   ++
Sbjct: 123 YGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (122), Expect = 2e-08
 Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 6/131 (4%)

Query: 337 MTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAAD 396
           +  L  ++  G  ++V+ ++            E      +  C G    V    L +   
Sbjct: 2   LALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCAGHTEIVKF--LVQFGV 58

Query: 397 LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGG---ARSIHTAARYGHVGI 453
            + +AD +G T LH AA+  ++Q+ + L+  GA + A        A         G+   
Sbjct: 59  NVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQC 118

Query: 454 INTLLQKGEKV 464
              L    EK+
Sbjct: 119 SQFLYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (115), Expect = 2e-07
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 4/128 (3%)

Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINS 82
             LL +   G  +LV  ++       + + EG +ALH A   G+ ++   L+     +N+
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 83  KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILT---LRKQTPLHLAAEAGQLQVCKL 139
               G T LH AA      +C+FLV +  A +  +T   ++         E G  Q  + 
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLV-ESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121

Query: 140 LLDLGASI 147
           L  +   +
Sbjct: 122 LYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 5e-07
 Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 4/128 (3%)

Query: 56  SALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVID 115
           + L  ++  G   +   ++      +  +  G TALH A   G+ ++ +FLV     V  
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 116 ILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK---PIHVAAQNNFPEVAQI 172
             +    TPLH AA    +QVCK L++ GA++ A      +         +  + + +Q 
Sbjct: 63  ADS-DGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121

Query: 173 FLRAHPSL 180
                  +
Sbjct: 122 LYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (108), Expect = 1e-06
 Identities = 17/145 (11%), Positives = 43/145 (29%), Gaps = 21/145 (14%)

Query: 499 TCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNG 558
             L  ++  G   +V+ ++ +  + +  +      L +         V         +N 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 559 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQK-- 616
                   +H  A+  ++                  QVCK L++ GA++ A      +  
Sbjct: 63  ADSDGWTPLHCAASCNNV------------------QVCKFLVESGAAVFAMTYSDMQTA 104

Query: 617 -PIHVAAQNNFPEVAQIFLRAHPSL 640
                  +  + + +Q        +
Sbjct: 105 ADKCEEMEEGYTQCSQFLYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 3e-06
 Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 1/126 (0%)

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT 182
             L  ++  G+  + + ++         +D+G   +H A      E+ +  ++   + V 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VN 61

Query: 183 ATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV 242
           A   DG T  H AA   +V V + L++   +      + +  A       E G+    + 
Sbjct: 62  AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121

Query: 243 LVKAGA 248
           L     
Sbjct: 122 LYGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 9e-04
 Identities = 21/128 (16%), Positives = 33/128 (25%), Gaps = 23/128 (17%)

Query: 292 TALHVAAYFGQADTVRELLSH--------------------VPGTVKSDPPTGASFLGEL 331
             L  ++  G+ D V+ ++                         T               
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 332 GSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHL--ACFGGHVTVVGL 389
               G TPLH AA   N  V + L+  +G  V A T  +             G+      
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLV-ESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121

Query: 390 LLSRAADL 397
           L      +
Sbjct: 122 LYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (86), Expect = 0.001
 Identities = 23/134 (17%), Positives = 44/134 (32%), Gaps = 14/134 (10%)

Query: 226 TPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVY 285
             L  ++  G  ++V+ ++      +  N  G TA+H A   GH ++++ +         
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 286 SKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHL--A 343
           +   G T LH AA        + L+             GA+ +  +      T       
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVES-----------GAA-VFAMTYSDMQTAADKCEE 110

Query: 344 AYSGNENVVRLLLN 357
              G     + L  
Sbjct: 111 MEEGYTQCSQFLYG 124

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (122), Expect = 4e-08
 Identities = 28/153 (18%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 371 GYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAE 430
             + L  A   G V  V  LL R      + ++ GKT L +         +E+L    + 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61

Query: 431 INATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLL 490
                 G +     A       +   +    +            H+ V     +  + L 
Sbjct: 62  NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121

Query: 491 QSA-----DKNGKTCLHIAATHGHLQMVEVLLG 518
             +     D  G T L +A   G   +V++L G
Sbjct: 122 AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (122), Expect = 4e-08
 Identities = 33/175 (18%), Positives = 54/175 (30%), Gaps = 27/175 (15%)

Query: 403 KNGKTCLHIAATHGHLQMVEVLLGQ-GAEINATDKGG------ARSIHTAARYGHVGIIN 455
           + G   L  AA  G +Q V  LL +     +A ++ G           TA     +    
Sbjct: 1   RAGDR-LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGA 59

Query: 456 TLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEV 515
           +   +        ++ A         +L      +   D  G   +H+A   GH  +V  
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119

Query: 516 LLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDH 570
           L                    ++ ++ +   G T L LA   G  DL   L   H
Sbjct: 120 LA------------------AESDLHRRDARGLTPLELALQRGAQDLVDILQ-GH 155

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (112), Expect = 7e-07
 Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 4/155 (2%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNH-ARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAF 79
               L  A  RG ++ V  +L+      D  ++ G++AL +          +     +  
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALEL--LKQGA 59

Query: 80  INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 139
             +      T+    A          ++ +H A +++       P+HLA + G   V   
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119

Query: 140 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 174
           L    + +   D +G  P+ +A Q    ++  I  
Sbjct: 120 LAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (112), Expect = 8e-07
 Identities = 28/155 (18%), Positives = 52/155 (33%), Gaps = 17/155 (10%)

Query: 495 KNGKTCLHIAATHGHLQMVEVLLGQ-GAEINATDK--------------VCDALLTHKAF 539
           + G   L  AA  G +Q V  LL +     +A ++                   L  +  
Sbjct: 1   RAGDR-LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGA 59

Query: 540 INSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKL 599
             +      T+    A          ++ +H A +++       P+HLA + G   V   
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119

Query: 600 LLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFL 634
           L    + +   D +G  P+ +A Q    ++  I  
Sbjct: 120 LAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (111), Expect = 9e-07
 Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 5/161 (3%)

Query: 153 QGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDR 212
           +    +  AA     +  +  L        A  + G T   +     +   +E L +   
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGAS 60

Query: 213 SGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQV 272
             V             +     G  + ++VLV+ GA     + TG   +HLA Q GH  V
Sbjct: 61  PNVQDTSGTSPVHDAAR----TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAV 116

Query: 273 LEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHV 313
           +  + +   L+    + G+T L +A   G  D V  L  H+
Sbjct: 117 VSFLAAESDLHRRDAR-GLTPLELALQRGAQDLVDILQGHM 156

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (106), Expect = 4e-06
 Identities = 26/168 (15%), Positives = 42/168 (25%), Gaps = 15/168 (8%)

Query: 436 KGGARSIHTAARYGHVGIINTLLQK-GEKVDVTTNNLACGHVTVVGLLLSRAADLLQSAD 494
           + G R +  AA  G V  +  LL +     D            ++             + 
Sbjct: 1   RAGDR-LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-----------FGST 48

Query: 495 KNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLA 554
                 L   A+              A           L+ H A +N     G   +H  
Sbjct: 49  AIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIH-- 106

Query: 555 AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD 602
                            + +     R  TPL LA + G   +  +L  
Sbjct: 107 LAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (99), Expect = 3e-05
 Identities = 24/156 (15%), Positives = 43/156 (27%), Gaps = 7/156 (4%)

Query: 120 RKQTPLHLAAEAGQLQVCKLLLDL-GASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHP 178
           R    L  AA  G +Q  + LL       DA +  G+  + V    +     ++  +   
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGAS 60

Query: 179 SLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHAN 238
             V  T+                  +      D +                  A      
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN------VPDGTGALPIHLAVQEGHT 114

Query: 239 VVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLE 274
            V   + A +     +  G T + LA Q G   +++
Sbjct: 115 AVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVD 150

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (98), Expect = 5e-05
 Identities = 34/156 (21%), Positives = 47/156 (30%), Gaps = 22/156 (14%)

Query: 290 GVTALHVAAYFGQADTVRELLS-------------------HVPGTVKSDPPTGASFLGE 330
               L  AA  G    VR LL                     + G+              
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61

Query: 331 LGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLL 390
              ++  T     A          +L   G  V+      G  P+HLA   GH  VV  L
Sbjct: 62  NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG-TGALPIHLAVQEGHTAVVSFL 120

Query: 391 LSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLG 426
            + +   L   D  G T L +A   G   +V++L G
Sbjct: 121 AAESD--LHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (98), Expect = 5e-05
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 29  CNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGR 88
              G ++ +  ++ + A V+V D  G   +HLA + G+  V   L   ++ ++ +   G 
Sbjct: 76  ARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGL 134

Query: 89  TALHLAAMNGYADLCRFLVHDH 110
           T L LA   G  DL   L   H
Sbjct: 135 TPLELALQRGAQDLVDILQ-GH 155

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (97), Expect = 6e-05
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 14  LNKQTSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL 73
           +N     G  P+ +A   GH  +V+ +    + +   D  G + L LA + G   + D L
Sbjct: 94  VNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDIL 152

Query: 74  LTH 76
             H
Sbjct: 153 QGH 155

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (110), Expect = 7e-07
 Identities = 28/121 (23%), Positives = 38/121 (31%), Gaps = 15/121 (12%)

Query: 497 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCD---------------ALLTHKAFIN 541
               L  AA  G ++ V  LL  GA  NA +                    LL H A  N
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 542 SKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 601
                  T     A          ++H   A +D+     + P+ LA E G   V + L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

Query: 602 D 602
            
Sbjct: 123 A 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (109), Expect = 8e-07
 Identities = 25/120 (20%), Positives = 33/120 (27%), Gaps = 7/120 (5%)

Query: 405 GKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKV 464
               L  AA  G ++ V  LL  GA  NA +  G R I              LL   E  
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 465 DVTTNNLACGHVTVVGLLLSRAADLLQ-------SADKNGKTCLHIAATHGHLQMVEVLL 517
                 L                 +L          D  G+  + +A   GH  +   L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (109), Expect = 9e-07
 Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 4/124 (3%)

Query: 123 TPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVT 182
             L  AA  G+++  + LL+ GA+ +A +  G++PI V    +      + L        
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 183 ATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRV 242
                       A       ++       R  V  A  R     P+ LA E GH +V R 
Sbjct: 65  DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGR----LPVDLAEELGHRDVARY 120

Query: 243 LVKA 246
           L  A
Sbjct: 121 LRAA 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (100), Expect = 1e-05
 Identities = 24/135 (17%), Positives = 37/135 (27%), Gaps = 13/135 (9%)

Query: 225 ATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNV 284
           A  L  AA  G    VR L++AGA+    N  G   + +            +        
Sbjct: 4   ADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE--- 60

Query: 285 YSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAA 344
                        A            +             A    ++    G  P+ LA 
Sbjct: 61  ----------PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAE 110

Query: 345 YSGNENVVRLLLNSA 359
             G+ +V R L  +A
Sbjct: 111 ELGHRDVARYLRAAA 125

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (96), Expect = 5e-05
 Identities = 29/122 (23%), Positives = 43/122 (35%), Gaps = 1/122 (0%)

Query: 21  GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFI 80
               L  A  RG +E V  +L   A  +  +  GR  +      G  +V + LL H A  
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQ-VMMMGSARVAELLLLHGAEP 61

Query: 81  NSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLL 140
           N       T     A          ++H   A +D+     + P+ LA E G   V + L
Sbjct: 62  NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121

Query: 141 LD 142
             
Sbjct: 122 RA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (92), Expect = 2e-04
 Identities = 25/129 (19%), Positives = 40/129 (31%), Gaps = 10/129 (7%)

Query: 438 GARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNG 497
            A  + TAA  G V  +  LL+ G   +   +        ++            SA    
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM----------GSARVAE 52

Query: 498 KTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMN 557
              LH A  +             A           L    A ++ +   GR  + LA   
Sbjct: 53  LLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEEL 112

Query: 558 GYADLCRFL 566
           G+ D+ R+L
Sbjct: 113 GHRDVARYL 121

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (88), Expect = 5e-04
 Identities = 25/126 (19%), Positives = 34/126 (26%), Gaps = 3/126 (2%)

Query: 334 ESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSR 393
           E     L  AA  G    VR LL  AG   +A           +      V  + LL   
Sbjct: 1   EPSADWLATAAARGRVEEVRALL-EAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGA 59

Query: 394 AADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGI 453
             +    A                  +V      GA ++  D  G   +  A   GH  +
Sbjct: 60  EPNCADPATLTRPVHDAAREGFLDTLVVLH--RAGARLDVRDAWGRLPVDLAEELGHRDV 117

Query: 454 INTLLQ 459
              L  
Sbjct: 118 ARYLRA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (83), Expect = 0.003
 Identities = 20/136 (14%), Positives = 30/136 (22%), Gaps = 16/136 (11%)

Query: 290 GVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNE 349
               L  AA  G+ + VR LL                  G   +                
Sbjct: 3   SADWLATAAARGRVEEVRALLEA----------------GANPNAPNSYGRRPIQVMMMG 46

Query: 350 NVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCL 409
           +     L                                ++L RA   L   D  G+  +
Sbjct: 47  SARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPV 106

Query: 410 HIAATHGHLQMVEVLL 425
            +A   GH  +   L 
Sbjct: 107 DLAEELGHRDVARYLR 122

>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]} Length = 116

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Inward rectifier potassium channel Kirbac1.1
species: Burkholderia pseudomallei [TaxId: 28450]

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 7/110 (6%)

Query: 702 KEVIAHTVVQRYLQELWQGSLNWAAWKTMLLFLTFILCPPVWICFTLSLGHKYNKVPIIK 761
           +EVIA+ +     ++L+  +L   +W      L  +        F L        +    
Sbjct: 1   REVIAYGMPASVWRDLYYWALK-VSWPVFFASLAALFV-VNNTLFALLYQLGDAPIANQS 58

Query: 762 FMSYLTSHMYLMFLLMLVGITPIYPVVRPNLVPYWYEWTLLVWLSGLLLF 811
              ++ +  + +  L  VG              Y +    L    G+   
Sbjct: 59  PPGFVGAFFFSVETLATVGYG-----DMHPQTVYAHAIATLEIFVGMSGI 103

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.7 bits (88), Expect = 5e-04
 Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 5/119 (4%)

Query: 23  TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINS 82
              + A   G ++ V   +     V+   + GR  LH AA+ G L++ + LL   A IN+
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 83  KSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLL 141
             +   T L  A   G+    +  +    A   +      T L         Q  K LL
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKL-LLSKGADKTVKGPDGLTALEATDN----QAIKALL 117

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	1015
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.97
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.97
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.97
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.97
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.97
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.97
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.96
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.96
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.96
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.95
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.95
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.95
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.94
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.93
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.93
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.92
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.91
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.91
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.91
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.91
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.88
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.88
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.86
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.85
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.85
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.84
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.84
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.84
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.83
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.8
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.78

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-46  Score=423.39  Aligned_cols=383  Identities=34%  Similarity=0.494  Sum_probs=327.5

Q ss_pred             CcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy14874         22 WTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD  101 (1015)
Q Consensus        22 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~e  101 (1015)
                      .||||+||..|+.++|++|+++|+++|..|..|+||||+|+..|+.++|++|+++|++++.++..|.||||+|+..|+.+
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~   80 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN   80 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred             CChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            39999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCc
Q psy14874        102 LCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLV  181 (1015)
Q Consensus       102 iv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~  181 (1015)
                      ++++|+.. ............+++..+...+...........+...+..+..+.++++.|+..++.+++++|++.+.+ .
T Consensus        81 ~~~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~-~  158 (408)
T d1n11a_          81 MVKLLLEN-NANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-P  158 (408)
T ss_dssp             HHHHHHHH-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred             HHHHHHHh-hhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCC-C
Confidence            99999954 445566667778899999999999988888888888888888888999999998888888888887665 2


Q ss_pred             ccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Q psy14874        182 TATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAV  261 (1015)
Q Consensus       182 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L  261 (1015)
                      +..+.                                    .+.+||+.|+..|+.+++++|+++|++++..+..|.||+
T Consensus       159 ~~~~~------------------------------------~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l  202 (408)
T d1n11a_         159 NAAGK------------------------------------NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPL  202 (408)
T ss_dssp             TCCCS------------------------------------SCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHH
T ss_pred             CcCCC------------------------------------cCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcc
Confidence            33333                                    344666667777777777777777888888888888888


Q ss_pred             HHHHHcCCHHHHHHHHhCCCccccccccCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHH
Q psy14874        262 HLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALHVAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLH  341 (1015)
Q Consensus       262 ~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~  341 (1015)
                      +.+....+.+....++.........+..+.||++.|+..++.++++.+........             ..+..|.+|++
T Consensus       203 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~-------------~~~~~g~~~l~  269 (408)
T d1n11a_         203 HIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN-------------LGNKSGLTPLH  269 (408)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-------------CCCTTCCCHHH
T ss_pred             hhhhccchhhhhhhhhhccccccccCCCCCCHHHHHHHhCcHhHhhhhhccccccc-------------cccCCCCChhh
Confidence            88888888888888887777666667777888888888888888888877643322             23456889999


Q ss_pred             HHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHH
Q psy14874        342 LAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMV  421 (1015)
Q Consensus       342 ~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv  421 (1015)
                      .|+..++.+++++|++ .|++++.. ...+.||||.++..++.++++++++.|++ ++.+|..|.||||.|++.|+.++|
T Consensus       270 ~a~~~~~~~i~~~Ll~-~g~~~~~~-~~~~~t~L~~~~~~~~~~~~~~ll~~g~~-in~~d~~G~T~Lh~A~~~g~~~iv  346 (408)
T d1n11a_         270 LVAQEGHVPVADVLIK-HGVMVDAT-TRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIV  346 (408)
T ss_dssp             HHHHHTCHHHHHHHHH-HTCCTTCC-CSSCCCHHHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             hhhhcCcHHHHHHHHH-CCCccccc-cccccccchhhcccCcceeeeeecccccc-ccccCCCCCCHHHHHHHcCCHHHH
Confidence            9999999999999997 48888754 45688999999999999999999999988 688899999999999999999999


Q ss_pred             HHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHH
Q psy14874        422 EVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLL  458 (1015)
Q Consensus       422 ~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll  458 (1015)
                      ++|+++||++|.+|.+|.||||+|++.|+.+++++|.
T Consensus       347 ~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~  383 (408)
T d1n11a_         347 TLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLK  383 (408)
T ss_dssp             HHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            9999999999999999999999999999999988654

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=412.41  Aligned_cols=389  Identities=30%  Similarity=0.436  Sum_probs=327.7

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHH
Q psy14874         56 SALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQ  135 (1015)
Q Consensus        56 t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~  135 (1015)
                      ||||+||..|+.++|++|+++|+++|..|..|.||||+||..|+.++|++|++ +|++++..+..|+||||+|+..|+.+
T Consensus         2 TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~-~gadi~~~~~~g~t~L~~A~~~g~~~   80 (408)
T d1n11a_           2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQ-NKAKVNAKAKDDQTPLHCAARIGHTN   80 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHH-HTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred             ChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            78888888888888888888888888888888888888888888888888884 46677778888888888888888888


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccc
Q psy14874        136 VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGV  215 (1015)
Q Consensus       136 ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~  215 (1015)
                      ++++|++.++++........+++..+...+...........+.. ...                                
T Consensus        81 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------------------------------  127 (408)
T d1n11a_          81 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEAS-QAC--------------------------------  127 (408)
T ss_dssp             HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCC--------------------------------
T ss_pred             HHHHHHHhhhccccccccccchhhhhhhhccccccccccccccc-ccc--------------------------------
Confidence            88888877777776666777777777766666555554443322 111                                


Q ss_pred             ccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHHH
Q psy14874        216 ISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTALH  295 (1015)
Q Consensus       216 ~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l~  295 (1015)
                          .+..+.++++.|+..++.++++.|+++|++++..+.++.+||+.|+..++.+++++|+.+++.....+..|.+|++
T Consensus       128 ----~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~  203 (408)
T d1n11a_         128 ----MTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLH  203 (408)
T ss_dssp             ----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHH
T ss_pred             ----cccccchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcch
Confidence                1234567888888888999999999999999999999999999999999999999999999988888899999999


Q ss_pred             HHHHcCCHHHHHHHHhcCCCCCCCCCCCCCccccccCCCCCCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHH
Q psy14874        296 VAAYFGQADTVRELLSHVPGTVKSDPPTGASFLGELGSESGMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPL  375 (1015)
Q Consensus       296 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL  375 (1015)
                      .+......+....++........             .+..+.||++.|+..++.++++++++. +...+. .+..|.||+
T Consensus       204 ~~~~~~~~~~~~~l~~~~~~~~~-------------~~~~~~t~l~~a~~~~~~~~~~~~~~~-~~~~~~-~~~~g~~~l  268 (408)
T d1n11a_         204 IAAKQNQVEVARSLLQYGGSANA-------------ESVQGVTPLHLAAQEGHAEMVALLLSK-QANGNL-GNKSGLTPL  268 (408)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTC-------------CCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTC-CCTTCCCHH
T ss_pred             hhhccchhhhhhhhhhccccccc-------------cCCCCCCHHHHHHHhCcHhHhhhhhcc-cccccc-ccCCCCChh
Confidence            99999999999999887544322             245688999999999999999999864 666664 356789999


Q ss_pred             HHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q psy14874        376 HLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIIN  455 (1015)
Q Consensus       376 ~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~  455 (1015)
                      +.|+..++.+++++|+++|++ ++..+..+.||||.++..++.+++++++++|+++|.+|..|.||||+|++.|+.++++
T Consensus       269 ~~a~~~~~~~i~~~Ll~~g~~-~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~  347 (408)
T d1n11a_         269 HLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVT  347 (408)
T ss_dssp             HHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             hhhhhcCcHHHHHHHHHCCCc-cccccccccccchhhcccCcceeeeeeccccccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            999999999999999999998 5777888999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHH---hcCCCCc
Q psy14874        456 TLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLL---GQGAEIN  524 (1015)
Q Consensus       456 ~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll---~~ga~~~  524 (1015)
                      +|+++|++++..                          |.+|.||||+|+..|+.++|++|.   +++++..
T Consensus       348 ~Ll~~GAd~n~~--------------------------d~~G~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~  393 (408)
T d1n11a_         348 LLLKNGASPNEV--------------------------SSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVL  393 (408)
T ss_dssp             HHHHTTCCSCCC--------------------------CSSSCCHHHHHHHTTCHHHHHHHHHHCCCCSSCC
T ss_pred             HHHHCCCCCCCC--------------------------CCCCCCHHHHHHHcCCHHHHHHHHHHHhcccccc
Confidence            999999998865                          789999999999999999998664   3444443

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-32  Score=277.97  Aligned_cols=220  Identities=29%  Similarity=0.434  Sum_probs=200.3

Q ss_pred             CccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCC
Q psy14874        371 GYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGH  450 (1015)
Q Consensus       371 g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~  450 (1015)
                      +.+.++.++..|+.+.++.++...+..++.+|..|+||||+|+..|+.+++++|++.+.+....+..+.++++.++..|+
T Consensus         3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
T d1uoha_           3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGR   82 (223)
T ss_dssp             SSSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTC
T ss_pred             CHHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhcccccccccccccccccccccccccccccccc
Confidence            35788889999999999888888777788999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHH
Q psy14874        451 VGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVC  530 (1015)
Q Consensus       451 ~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~  530 (1015)
                      .+++++|+++|++++..                          |..|.||||+|+..|+.+++++|+++|+++       
T Consensus        83 ~~i~~~Ll~~~~d~~~~--------------------------d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~-------  129 (223)
T d1uoha_          83 DEIVKALLGKGAQVNAV--------------------------NQNGCTPLHYAASKNRHEIAVMLLEGGANP-------  129 (223)
T ss_dssp             HHHHHHHHHTTCCTTCC--------------------------CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-------
T ss_pred             cchhHHHhccCceeEee--------------------------CCCCCchhhHHHHcCCHHHHHHHHHCCCCC-------
Confidence            99999999999887654                          788999999999999999999999999988       


Q ss_pred             HhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy14874        531 DALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDAT  610 (1015)
Q Consensus       531 ~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~  610 (1015)
                                +.++..|.||||+|+..++.+++++|++.+ .+++..|.+|+||||.|+..|+.++|++|+++|++++.+
T Consensus       130 ----------~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~-~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~  198 (223)
T d1uoha_         130 ----------DAKDHYEATAMHRAAAKGNLKMIHILLYYK-ASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIE  198 (223)
T ss_dssp             ----------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred             ----------CCcCCCCCccchhhhhcCCcchhhhhcccc-ceeeeccCCCCceeccccccCcHHHHHHHHHCCCCCCCC
Confidence                      456778999999999999999999998654 457889999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHHHhcCChHHHHHHHH
Q psy14874        611 DDQGQKPIHVAAQNNFPEVAQIFLR  635 (1015)
Q Consensus       611 d~~g~t~l~~A~~~~~~~~~~~ll~  635 (1015)
                      |..|+||||+| .+|+.++++.|++
T Consensus       199 d~~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         199 NKEEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             CTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             CCCCCCHHHHH-HCCCHHHHhcccC
Confidence            99999999998 5799999998875

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.4e-32  Score=286.64  Aligned_cols=243  Identities=28%  Similarity=0.322  Sum_probs=187.5

Q ss_pred             ccCCccHHHHHHhCCCHHHHHHHHHhcch--hhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHH
Q psy14874        368 QENGYNPLHLACFGGHVTVVGLLLSRAAD--LLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTA  445 (1015)
Q Consensus       368 ~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~--~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A  445 (1015)
                      +++|.||||+|+..|+.+++++|++++++  .++..+..|.||||+|+..|+.+++++|+++|++++..|.+|.||||+|
T Consensus         6 ~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A   85 (255)
T d1oy3d_           6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLA   85 (255)
T ss_dssp             CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHH
T ss_pred             CcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhhhhh
Confidence            46789999999999999999999988765  3567788999999999999999999999999999999999999999999


Q ss_pred             HHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcc
Q psy14874        446 ARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA  525 (1015)
Q Consensus       446 ~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~  525 (1015)
                      +..|+.+++++|++.+...+.......          ..      ...+..+.+....+.....             ...
T Consensus        86 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~----------~~------~~~~~~~~~~~~~~~~~~~-------------~~~  136 (255)
T d1oy3d_          86 CRVRAHTCACVLLQPRPSHPRDASDTY----------LT------QSQDCTPDTSHAPAAVDSQ-------------PNP  136 (255)
T ss_dssp             TTTTCHHHHHHHSSSCCSSCCCC---------------------------------------------------------
T ss_pred             hccCchHHHHHHHhhccchhcccchhh----------hh------HHhhhcccchHHHHHHHhh-------------cch
Confidence            999999999999998765443211100          00      0000001111111110000             000


Q ss_pred             hhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCC
Q psy14874        526 TDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA  605 (1015)
Q Consensus       526 ~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga  605 (1015)
                      ...........+..++.++..|.||||+|+..|+.++|++|++.+....+..+..|.||||+|+..|+.+++++|+++|+
T Consensus       137 ~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~ga  216 (255)
T d1oy3d_         137 ENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA  216 (255)
T ss_dssp             -------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             hHHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCC
Confidence            11111222334556688999999999999999999999999998888777778899999999999999999999999999


Q ss_pred             CCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874        606 SIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  639 (1015)
Q Consensus       606 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~  639 (1015)
                      +++.+|..|+||||+|+.+++.+++++|++++.+
T Consensus       217 din~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         217 DPTARMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             CTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            9999999999999999999999999999998764

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.7e-31  Score=282.05  Aligned_cols=245  Identities=24%  Similarity=0.200  Sum_probs=159.0

Q ss_pred             ccCCCCCCcHHHHHHhcCCHHHHHHHHhCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q psy14874         15 NKQTSIGWTPLLIACNRGHMELVNTMLNNHAR---VDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTAL   91 (1015)
Q Consensus        15 n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~---~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L   91 (1015)
                      +-.|.+|.||||+||+.|+.++|++|+++|++   ++..|..|+||||+|+..|+.+++++|+++|++++.++..|.|||
T Consensus         3 ~~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL   82 (255)
T d1oy3d_           3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL   82 (255)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred             ccCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhh
Confidence            34578999999999999999999999999987   667789999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHH
Q psy14874         92 HLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQ  171 (1015)
Q Consensus        92 ~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~  171 (1015)
                      |+|+..|+.+++++|++..... +.   ...............+..                 ..++.............
T Consensus        83 ~~A~~~~~~~~~~~Ll~~~~~~-~~---~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~  141 (255)
T d1oy3d_          83 HLACRVRAHTCACVLLQPRPSH-PR---DASDTYLTQSQDCTPDTS-----------------HAPAAVDSQPNPENEEE  141 (255)
T ss_dssp             HHHTTTTCHHHHHHHSSSCCSS-CC---CC--------------------------------------------------
T ss_pred             hhhhccCchHHHHHHHhhccch-hc---ccchhhhhHHhhhcccch-----------------HHHHHHHhhcchhHHHH
Confidence            9999999999999998643321 11   111110000000000000                 00000000000011111


Q ss_pred             HHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy14874        172 IFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCT  251 (1015)
Q Consensus       172 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~  251 (1015)
                      .+.......++.++.+|.||||+|+..|+.+++++|++.+....  ...+..|.||||.|++.|+.+++++|+++|++++
T Consensus       142 ~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin  219 (255)
T d1oy3d_         142 PRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN--KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT  219 (255)
T ss_dssp             --CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT--CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             HHhhhcCcccccccccCcccccccccccccccccchhccccccc--ccccccccccccccccccHHHHHHHHHHCCCCCC
Confidence            11111111233444555555555555555555555555433322  2223456677777777778888888888888888


Q ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc
Q psy14874        252 DENKTGFTAVHLAAQNGHNQVLEEMRSSKAL  282 (1015)
Q Consensus       252 ~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~  282 (1015)
                      .+|..|.||||+|+..++.+++++|+++|+.
T Consensus       220 ~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         220 ARMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             CCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            8888888888888888888888888888774

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7e-31  Score=270.53  Aligned_cols=219  Identities=27%  Similarity=0.358  Sum_probs=187.2

Q ss_pred             CCcHHHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy14874         21 GWTPLLIACNRGHMELVNTMLN-NHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGY   99 (1015)
Q Consensus        21 g~t~L~~A~~~g~~~iv~~Ll~-~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~   99 (1015)
                      +.+.|+.+|..|+.+.|+.+++ .+..++.+|.+|+||||+|+..|+.+++++|++.+.+....+..+.++++.++..|+
T Consensus         3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
T d1uoha_           3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGR   82 (223)
T ss_dssp             SSSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTC
T ss_pred             CHHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhcccccccccccccccccccccccccccccccc
Confidence            4688999999999998866654 567888899999999999999999999999999999888888889999999999999


Q ss_pred             HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCC
Q psy14874        100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  179 (1015)
Q Consensus       100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~  179 (1015)
                      .+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|.+.+.+
T Consensus        83 ~~i~~~Ll~-~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~  161 (223)
T d1uoha_          83 DEIVKALLG-KGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAS  161 (223)
T ss_dssp             HHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             cchhHHHhc-cCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhccccce
Confidence            999999995 5678899999999999999999999999999999999999999999999999999999999888887665


Q ss_pred             CcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q psy14874        180 LVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFT  259 (1015)
Q Consensus       180 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t  259 (1015)
                       ++..+.                                    .|.||||.|++.|+.+++++|+++|++++.+|.+|+|
T Consensus       162 -i~~~d~------------------------------------~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~t  204 (223)
T d1uoha_         162 -TNIQDT------------------------------------EGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKT  204 (223)
T ss_dssp             -SCCCCT------------------------------------TCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred             -eeeccC------------------------------------CCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCC
Confidence             344443                                    3556667777777788888888888888888888889


Q ss_pred             HHHHHHHcCCHHHHHHHHh
Q psy14874        260 AVHLAAQNGHNQVLEEMRS  278 (1015)
Q Consensus       260 ~L~~A~~~~~~~iv~~Ll~  278 (1015)
                      |||+| ..|+.++++.|++
T Consensus       205 pl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         205 PLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             HHHHC-CTTHHHHHHHHHC
T ss_pred             HHHHH-HCCCHHHHhcccC
Confidence            98887 4688888888875

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3e-30  Score=277.40  Aligned_cols=269  Identities=29%  Similarity=0.444  Sum_probs=231.9

Q ss_pred             CCCHHHHHHhcCCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHc
Q psy14874        336 GMTPLHLAAYSGNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATH  415 (1015)
Q Consensus       336 ~~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~  415 (1015)
                      +.|+|+.|++.|+.++|++|++. |++++...+..|.||||+|+..|+.+++++|++.+.. ....+..+.+|.+.|+..
T Consensus         5 ~~~~L~~Ai~~~~~e~vk~Ll~~-G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~-~~~~~~~~~~~~~~~~~~   82 (285)
T d1wdya_           5 DNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAAIA   82 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHH
T ss_pred             CcHHHHHHHHcCCHHHHHHHHHC-CCCcCccCCCCCCCHHHHHHHcCCHHHhhhhcccccc-ccccccccchhhHHHhhc
Confidence            56899999999999999999975 9999988888899999999999999999999999988 466677889999999999


Q ss_pred             CCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCC
Q psy14874        416 GHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADK  495 (1015)
Q Consensus       416 g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~  495 (1015)
                      +..+....++++..+....+..+.++++.|+..|+...++.++....+++.....                .......+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~  146 (285)
T d1wdya_          83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKT----------------KEDQERLRK  146 (285)
T ss_dssp             TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCC----------------CHHHHHTTC
T ss_pred             CCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccc----------------hhhhhhhcc
Confidence            9999999999998888888999999999999999999999999988877654321                112234567


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhc-CCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHH----cCcHHHHHHHHhcC
Q psy14874        496 NGKTCLHIAATHGHLQMVEVLLGQ-GAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAM----NGYADLCRFLVHDH  570 (1015)
Q Consensus       496 ~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~~  570 (1015)
                      .|.||||.|+..|+.+++++|+++ |+++                 +..+..|.++++.+..    .+..+++++|++.+
T Consensus       147 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~g  209 (285)
T d1wdya_         147 GGATALMDAAEKGHVEVLKILLDEMGADV-----------------NACDNMGRNALIHALLSSDDSDVEAITHLLLDHG  209 (285)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHTSCCCT-----------------TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT
T ss_pred             cCchHHHHHHHcCCHHHHHHHHhccCCCc-----------------ccccCCCCcccccccccccchHHHHHHHHHHHCC
Confidence            899999999999999999999975 7777                 4566677777776544    34467899999765


Q ss_pred             CccccccccCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCcc
Q psy14874        571 AAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD-LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSL  640 (1015)
Q Consensus       571 ~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~~  640 (1015)
                      . +++.++..|.||||.|+..|+.+++++|++ .|++++.+|.+|.||||+|+++++.+++++|++++.+.
T Consensus       210 a-~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~  279 (285)
T d1wdya_         210 A-DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST  279 (285)
T ss_dssp             C-CSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCS
T ss_pred             C-CCCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence            4 467888899999999999999999999997 48999999999999999999999999999999988764

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2.9e-30  Score=267.67  Aligned_cols=224  Identities=27%  Similarity=0.415  Sum_probs=202.3

Q ss_pred             ccHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCccc---CCCCCCCHHHHHHHh
Q psy14874        372 YNPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA---TDKGGARSIHTAARY  448 (1015)
Q Consensus       372 ~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~---~~~~g~t~L~~A~~~  448 (1015)
                      ++|||.||..|+.++++.|++..+..++.+|.+|.||||+|+..|+.+++++|+++|++++.   .+..|.+|+++++..
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~   80 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV   80 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred             CHhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccccc
Confidence            47999999999999999999887777889999999999999999999999999999999874   566789999999999


Q ss_pred             CCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhh
Q psy14874        449 GHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDK  528 (1015)
Q Consensus       449 g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~  528 (1015)
                      +..++++.++..+...+..                        ..+..+.|+++.++..++.+++++|++.|.+.     
T Consensus        81 ~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-----  131 (229)
T d1ixva_          81 GNLEVVKSLYDRPLKPDLN------------------------KITNQGVTCLHLAVGKKWFEVSQFLIENGASV-----  131 (229)
T ss_dssp             TCHHHHHHHHSSSSCCCTT------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-----
T ss_pred             ccccccccccccccccccc------------------------ccccccccccccccccchhhhhhhhhhhcccc-----
Confidence            9999999999998766533                        33678899999999999999999999999887     


Q ss_pred             HHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHH-cCCCC
Q psy14874        529 VCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD-LGASI  607 (1015)
Q Consensus       529 ~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~-~ga~~  607 (1015)
                                  +.++..|+||||+|+..|+.+++++|++.+..+++.+|.+|.||||+|+..|+.+++++|++ .|+++
T Consensus       132 ------------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~  199 (229)
T d1ixva_         132 ------------RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY  199 (229)
T ss_dssp             ------------CCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS
T ss_pred             ------------cccCCCCCCccchhhhcccccccccccccccccccccccccCCchhhhcccccHHHHHHHHHhcCCCC
Confidence                        44677899999999999999999999998888889999999999999999999999999997 59999


Q ss_pred             CCCCCCCCCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874        608 DATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  639 (1015)
Q Consensus       608 ~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~  639 (1015)
                      +.+|..|+||||+|+.   .+++++|++++.+
T Consensus       200 ~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         200 DLVDNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             CCCCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             CCcCCCCCCHHHHHhh---HHHHHHHHHcCCC
Confidence            9999999999999984   5799999988753

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.7e-29  Score=268.78  Aligned_cols=264  Identities=23%  Similarity=0.252  Sum_probs=219.5

Q ss_pred             CCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q psy14874         20 IGWTPLLIACNRGHMELVNTMLNNHARVDVFD-QEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNG   98 (1015)
Q Consensus        20 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g   98 (1015)
                      ++.|+||.|++.|+.++|++|+++|+++|.++ ..|.||||+|+..|+.+++++|++.+...+..+..+.+|.+.|+..+
T Consensus         4 ~~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~   83 (285)
T d1wdya_           4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG   83 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             CCcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcC
Confidence            35699999999999999999999999999775 46899999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC----------CCCCcHHHHHHHcCChH
Q psy14874         99 YADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD----------DQGQKPIHVAAQNNFPE  168 (1015)
Q Consensus        99 ~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d----------~~~~t~L~~A~~~g~~~  168 (1015)
                      ..+....+++. .......+..+.++++.|+..|+...++.+++...+++...          ..|.||||+|++.|+.+
T Consensus        84 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~  162 (285)
T d1wdya_          84 SVKLLKLFLSK-GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE  162 (285)
T ss_dssp             CHHHHHHHHHT-TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHH
T ss_pred             Cccccchhhhh-cccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCHH
Confidence            99999999965 44445667889999999999999999999999888776543          35789999999999999


Q ss_pred             HHHHHhhcCCCCcccCCCCCchHHHHHHHcC----CHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy14874        169 VAQIFLRAHPSLVTATTKDGNTCAHIAAMQG----SVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLV  244 (1015)
Q Consensus       169 iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g----~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll  244 (1015)
                      ++++|++.....++..+..|.++...+...+    ..+++++|++.+.+..   ..+..|.||||.|++.|+.+++++|+
T Consensus       163 ~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n---~~~~~g~t~L~~a~~~~~~~~v~~lL  239 (285)
T d1wdya_         163 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN---VRGERGKTPLILAVEKKHLGLVQRLL  239 (285)
T ss_dssp             HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS---CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCC---ccCCCCCCccchhhhcCcHHHHHHHH
Confidence            9999998766567778888887776655433    4467888887665532   23456778888888888888888888


Q ss_pred             H-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccccc
Q psy14874        245 K-AGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSK  287 (1015)
Q Consensus       245 ~-~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~  287 (1015)
                      + .|++++.+|.+|.||||+|++.|+.+++++|+++|++.+..+
T Consensus       240 ~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         240 EQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             HSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             HcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccc
Confidence            6 478888888888888888888888888888888888765543

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=1.4e-30  Score=278.62  Aligned_cols=263  Identities=25%  Similarity=0.353  Sum_probs=213.8

Q ss_pred             CCHHHHHHhc-CCHHHHHHHHhhcCCCcccccccCCccHHHHHHhCCCHHHHHHHH--------HhcchhhcccCCCCCc
Q psy14874        337 MTPLHLAAYS-GNENVVRLLLNSAGVQVDAQTQENGYNPLHLACFGGHVTVVGLLL--------SRAADLLQSADKNGKT  407 (1015)
Q Consensus       337 ~t~L~~A~~~-g~~~~v~~Ll~~~g~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll--------~~~~~~~~~~d~~g~t  407 (1015)
                      +||||+++.. |+.++++.|. +.+++.  .....|+||||+|+..|+.+++++|+        +.|++ ++.+|.+|+|
T Consensus         1 ~~p~~~~~~~~~~~~~~~~l~-~~~~n~--~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gad-vn~~d~~G~T   76 (277)
T d2fo1e1           1 ESPIKLHTEAAGSYAITEPIT-RESVNI--IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-VNAMDCDENT   76 (277)
T ss_dssp             CCCCHHHHHHHSSSCCCSCCS-TTTTTT--CCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-TTCCCTTSCC
T ss_pred             CChHHHHHHhCCCHHHHHHHH-hcCCCc--CCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCC-ccccCCCCCe
Confidence            3788866554 4555555554 445554  33456999999999999999888775        44666 6788999999


Q ss_pred             HHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhh
Q psy14874        408 CLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAA  487 (1015)
Q Consensus       408 ~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~  487 (1015)
                      |||+|+..|+.+++++|+++|++++.++..|.||++.|+..++.++.+.+...+...                       
T Consensus        77 pLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~-----------------------  133 (277)
T d2fo1e1          77 PLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLK-----------------------  133 (277)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH-----------------------
T ss_pred             eeccccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhccccc-----------------------
Confidence            999999999999999999999999999999999999999999999999887653211                       


Q ss_pred             hhhhhcCCCCCcHHHHHHHcCC---HHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHH
Q psy14874        488 DLLQSADKNGKTCLHIAATHGH---LQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCR  564 (1015)
Q Consensus       488 ~~~~~~~~~g~t~L~~A~~~g~---~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~  564 (1015)
                      ..++..+..+.++.+.+...+.   ...++.+.+.......         ......+..+..|.||||+++..++.++++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~  204 (277)
T d2fo1e1         134 GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDY---------DGAARKDSEKYKGRTALHYAAQVSNMPIVK  204 (277)
T ss_dssp             HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSC---------CSGGGTSSSSCCCCCTHHHHHSSCCHHHHH
T ss_pred             ccccccccccchhHHHHHhcccccccccccccccccccccc---------cccccccccccCCCCccccccccccccccc
Confidence            1123446778899999888765   3455555554433221         112334667788999999999999999999


Q ss_pred             HHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHH
Q psy14874        565 FLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR  635 (1015)
Q Consensus       565 ~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~  635 (1015)
                      +++...+.+.+..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+++|+.|++++|.+
T Consensus       205 ~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         205 YLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             HHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             cccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            99988888888999999999999999999999999999999999999999999999999999999998875

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=3e-30  Score=276.14  Aligned_cols=253  Identities=21%  Similarity=0.296  Sum_probs=184.4

Q ss_pred             CcHHHHHHhc-CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH--------HhCCCCCCCCCCCCCcHHH
Q psy14874         22 WTPLLIACNR-GHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDAL--------LTHKAFINSKSRVGRTALH   92 (1015)
Q Consensus        22 ~t~L~~A~~~-g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~L--------l~~ga~in~~~~~g~t~L~   92 (1015)
                      .||||+|++. |+.++++.|.+.++++.. +..|+||||+|+..|+.++|++|        ++.|+++|.+|..|+||||
T Consensus         1 ~~p~~~~~~~~~~~~~~~~l~~~~~n~~~-~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh   79 (277)
T d2fo1e1           1 ESPIKLHTEAAGSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLM   79 (277)
T ss_dssp             CCCCHHHHHHHSSSCCCSCCSTTTTTTCC-CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHH
T ss_pred             CChHHHHHHhCCCHHHHHHHHhcCCCcCC-CCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeec
Confidence            4788855544 666777777777666532 24588888888888888877665        4668888888888888888


Q ss_pred             HHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCcHHHHHHHcCChH-
Q psy14874         93 LAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLG---ASIDATDDQGQKPIHVAAQNNFPE-  168 (1015)
Q Consensus        93 ~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~g---ad~n~~d~~~~t~L~~A~~~g~~~-  168 (1015)
                      +|+..|+.++|++|++ .+++++..+..|.||++.|+..|+.++++++...+   ..++..+..+.++.+.+...+..+ 
T Consensus        80 ~A~~~g~~~iv~~Ll~-~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (277)
T d2fo1e1          80 LAVLARRRRLVAYLMK-AGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQ  158 (277)
T ss_dssp             HHHHHTCHHHHHHHHH-TTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTH
T ss_pred             cccccccccccccccc-cccccccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccc
Confidence            8888888888888884 57778888888888888888888888888877654   355667777788888887776554 


Q ss_pred             --HHHHHhhcCCC-------CcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHH
Q psy14874        169 --VAQIFLRAHPS-------LVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANV  239 (1015)
Q Consensus       169 --iv~~Ll~~~~~-------~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~i  239 (1015)
                        .+..+.+....       .....+..|.|+||+++..++.++++.++.....  .....+..|.||||.|++.|+.++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~--~~~~~d~~g~tpL~~A~~~g~~~i  236 (277)
T d2fo1e1         159 VASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGS--NKDKQDEDGKTPIMLAAQEGRIEV  236 (277)
T ss_dssp             HHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCC--CTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred             cccccccccccccccccccccccccccCCCCccccccccccccccccccccccc--cccccCCCCCCHHHHHHHcCCHHH
Confidence              33333332221       1233456678888888888888888776653322  222334567888888888888888


Q ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy14874        240 VRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRS  278 (1015)
Q Consensus       240 v~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~  278 (1015)
                      +++|+++|++++.+|.+|.||||+|+++|+.+++++|.+
T Consensus       237 v~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         237 VMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             HHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            888888888888888888888888888888888888875

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=4.5e-29  Score=258.53  Aligned_cols=187  Identities=25%  Similarity=0.269  Sum_probs=159.9

Q ss_pred             CcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC---CCCCCCCcHHHHHHHc
Q psy14874         22 WTPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFIN---SKSRVGRTALHLAAMN   97 (1015)
Q Consensus        22 ~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in---~~~~~g~t~L~~A~~~   97 (1015)
                      .||||+||+.|+.++|+.|++. +.+++.+|.+|+||||+|+..|+.+++++|+++|++++   ..+..|.+|+|+++..
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~   80 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV   80 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred             CHhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccccc
Confidence            4899999999999999999884 57899999999999999999999999999999999976   4567899999999999


Q ss_pred             CCHHHHHHHHhccC-ccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874         98 GYADLCRFLVHDHA-AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus        98 g~~eiv~~Ll~~~~-~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      +..++++.++.... ......+..+.|+++.++..++.+++++|++.|.+.+..|..|.||||+|+..|+.+++++|++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~  160 (229)
T d1ixva_          81 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL  160 (229)
T ss_dssp             TCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhccccccccccccc
Confidence            99999998885432 23455677889999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCcccCCCCCchHHHHHHHcCCHHHHHHHH
Q psy14874        177 HPSLVTATTKDGNTCAHIAAMQGSVGVIEELM  208 (1015)
Q Consensus       177 ~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll  208 (1015)
                      ++..++..+.+|.||||+|+.+|+.+++++|+
T Consensus       161 ~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll  192 (229)
T d1ixva_         161 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV  192 (229)
T ss_dssp             TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             ccccccccccccCCchhhhcccccHHHHHHHH
Confidence            87766777777766666666655555555544

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.96  E-value=6.8e-29  Score=267.56  Aligned_cols=231  Identities=29%  Similarity=0.443  Sum_probs=147.2

Q ss_pred             cHHHHHHhCCCHHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHH
Q psy14874        373 NPLHLACFGGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVG  452 (1015)
Q Consensus       373 tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~  452 (1015)
                      |+|+.||..|+.++|++|+++|++ ++..|.+|.||||+|+..|+.+++++|+++|++.+..+..+.+|++.++..++.+
T Consensus        42 t~l~~A~~~G~~~~v~~Ll~~Gad-vn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~~  120 (291)
T d1s70b_          42 AVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLD  120 (291)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred             hHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccccccc
Confidence            455555555555555555555544 3444555555555555555555555555555555555555555555555555555


Q ss_pred             HHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCcchhh---
Q psy14874        453 IINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQ-GAEINATDK---  528 (1015)
Q Consensus       453 ~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~---  528 (1015)
                      +++.|+++|...+..                          +..+.+++++|+..+..+.++.++.. |.++.....   
T Consensus       121 ~~~~l~~~~~~~~~~--------------------------~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~  174 (291)
T d1s70b_         121 IAEYLISQGAHVGAV--------------------------NSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEE  174 (291)
T ss_dssp             HHHHHHHTTCCTTCC--------------------------CTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred             hhhcccccCcccccc--------------------------cccCccccccccccccchhcccccccccccccccccccc
Confidence            555555555443322                          34455555555555555555555532 222221111   


Q ss_pred             ------HHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHH
Q psy14874        529 ------VCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD  602 (1015)
Q Consensus       529 ------~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~  602 (1015)
                            ....+..........+..|.||||.|+..|+.+++++|++.+ .+++.++..|+||||+|+..|+.++|++|++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g-~din~~~~~g~TpL~~A~~~g~~~iv~lLl~  253 (291)
T d1s70b_         175 RIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYDGWTPLHAAAHWGKEEACRILVE  253 (291)
T ss_dssp             HHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred             ccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccce-ecccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence                  111122222334556778999999999999999999999765 4568899999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHH
Q psy14874        603 LGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR  635 (1015)
Q Consensus       603 ~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~  635 (1015)
                      +|+|++.+|..|+||||+|++    +++++|.+
T Consensus       254 ~Gadv~~~d~~G~TaL~~A~e----~~~~~L~~  282 (291)
T d1s70b_         254 NLCDMEAVNKVGQTAFDVADE----DILGYLEE  282 (291)
T ss_dssp             TTCCTTCCCTTSCCTTTSCCS----GGGHHHHH
T ss_pred             CCCCCCCcCCCCCCHHHHHHH----HHHHHHHH
Confidence            999999999999999999975    46665554

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.95  E-value=2.4e-28  Score=263.26  Aligned_cols=233  Identities=25%  Similarity=0.311  Sum_probs=118.0

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCH
Q psy14874         55 RSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL  134 (1015)
Q Consensus        55 ~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~  134 (1015)
                      .|||+.||..|+.++|++|+++|+++|.+|.+|.||||+|+.+|+.++|++|++ ++.+.+..+..+.+||+.|+..|+.
T Consensus        41 ~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~-~~~~~~~~~~~~~~~L~~a~~~~~~  119 (291)
T d1s70b_          41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVE-NGANINQPDNEGWIPLHAAASCGYL  119 (291)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             chHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeecc-ccccccccccccccccccccccccc
Confidence            355555555555555555555555555555555555555555555555555553 3344445555555555555555555


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcc
Q psy14874        135 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSG  214 (1015)
Q Consensus       135 ~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~  214 (1015)
                      ++++.|+++|++.+..|..+.+|+++|+..++.+.++.++.............+..+.       .......+....   
T Consensus       120 ~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---  189 (291)
T d1s70b_         120 DIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIM-------LRDARQWLNSGH---  189 (291)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHH-------HHHHHHHHHHTC---
T ss_pred             chhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccc-------cccchhhhcccc---
Confidence            5555555555555555555555555555555555555555432221111000000000       001111111111   


Q ss_pred             cccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccccCCCHH
Q psy14874        215 VISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQVLEEMRSSKALNVYSKKLGVTAL  294 (1015)
Q Consensus       215 ~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~t~l  294 (1015)
                      .........+.|||+.|+..|+.++++.|+++|++++..+.+|.||||+|+..|+.+++++|+++|++....+..|.|||
T Consensus       190 ~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL  269 (291)
T d1s70b_         190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF  269 (291)
T ss_dssp             CCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred             cccccccCCCCChhhHHHHcCChhhhcccccceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence            11112223455555555555555666666655555555555555666666666666666666555555555555555665


Q ss_pred             HHHH
Q psy14874        295 HVAA  298 (1015)
Q Consensus       295 ~~A~  298 (1015)
                      ++|+
T Consensus       270 ~~A~  273 (291)
T d1s70b_         270 DVAD  273 (291)
T ss_dssp             TSCC
T ss_pred             HHHH
Confidence            5554

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-27  Score=246.18  Aligned_cols=193  Identities=22%  Similarity=0.299  Sum_probs=170.3

Q ss_pred             CCCcHHHHHHhcCCH----HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy14874         20 IGWTPLLIACNRGHM----ELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAA   95 (1015)
Q Consensus        20 ~g~t~L~~A~~~g~~----~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~   95 (1015)
                      +|+||||+|+..|+.    ++++++..+|+++|..|.+|+||||+|+..|+.+++++|++.|++++.++..|.|||+.|+
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~   80 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC   80 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccccccccccccccccccccc
Confidence            699999999999995    5566777789999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhccC-----ccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCChHH
Q psy14874         96 MNGYADLCRFLVHDHA-----AVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATD-DQGQKPIHVAAQNNFPEV  169 (1015)
Q Consensus        96 ~~g~~eiv~~Ll~~~~-----~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d-~~~~t~L~~A~~~g~~~i  169 (1015)
                      ..|+.++++.|+....     .........|.||||.|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.++
T Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~  160 (221)
T d1iknd_          81 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL  160 (221)
T ss_dssp             HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred             ccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHH
Confidence            9999999999986422     2234455568999999999999999999999999998776 469999999999999999


Q ss_pred             HHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCc
Q psy14874        170 AQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRS  213 (1015)
Q Consensus       170 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~  213 (1015)
                      +++|++++.+ ++.++.+|.||||+|+..++.+++++|.+...+
T Consensus       161 v~~Ll~~gad-~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         161 VSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             HHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             HHHHHhcCCc-ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence            9999999887 788999999999999999999999999987544

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-27  Score=246.15  Aligned_cols=200  Identities=26%  Similarity=0.330  Sum_probs=148.4

Q ss_pred             CCCcHHHHHHHcCCH----HHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCCCcccccccccCchHHH
Q psy14874        404 NGKTCLHIAATHGHL----QMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVV  479 (1015)
Q Consensus       404 ~g~t~L~~A~~~g~~----~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~  479 (1015)
                      +|.||||+|+..|+.    ++++.+...|+++|.+|..|.||||+|+..|+.+++++|+++|++++..            
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~------------   68 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELR------------   68 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCC------------
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccccccccc------------
Confidence            467777777777764    3445555567777777777777777777777777777777777766543            


Q ss_pred             HHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhccccccccCCCCCcHHHHHHHcCc
Q psy14874        480 GLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSKSRVGRTALHLAAMNGY  559 (1015)
Q Consensus       480 ~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~  559 (1015)
                                    |..|.|||+.|+..|+.++++.|++.+.......           ........|.||||.|+..++
T Consensus        69 --------------d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~-----------~~~~~~~~~~t~l~~a~~~~~  123 (221)
T d1iknd_          69 --------------DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHS-----------ILKATNYNGHTCLHLASIHGY  123 (221)
T ss_dssp             --------------CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSC-----------GGGCCCTTCCCHHHHHHHTTC
T ss_pred             --------------ccccccccccccccccccccchhhhhcccccccc-----------cccccccccchhhhHHhhcCC
Confidence                          5667777777777777777777777765543221           123444557788888888888


Q ss_pred             HHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCChHHHHHHHHhCCc
Q psy14874        560 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPS  639 (1015)
Q Consensus       560 ~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~~~~  639 (1015)
                      .+++++|++.+.......+..|.||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..++.+++++|.+...+
T Consensus       124 ~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             hhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence            88888887776665555566799999999999999999999999999999999999999999999999999999887655


Q ss_pred             c
Q psy14874        640 L  640 (1015)
Q Consensus       640 ~  640 (1015)
                      .
T Consensus       204 ~  204 (221)
T d1iknd_         204 N  204 (221)
T ss_dssp             G
T ss_pred             c
Confidence            3

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.7e-26  Score=237.78  Aligned_cols=222  Identities=24%  Similarity=0.366  Sum_probs=192.9

Q ss_pred             CCccHHHHHHhCCCHHHHHHHHH----hcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHH
Q psy14874        370 NGYNPLHLACFGGHVTVVGLLLS----RAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTA  445 (1015)
Q Consensus       370 ~g~tpL~~A~~~g~~~iv~~Ll~----~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A  445 (1015)
                      +|.||||+||..|+.++++.|++    .|.+ ++..|..|.||||+|+..|+.+++++|+++|++++..+..|.++++.|
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~-in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a   80 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA   80 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHCCCC-CCccCCCCCccceehhcccccccccccccccccccccccccccccccc
Confidence            58888888888888888888875    4555 678889999999999999999999999999999999999999999999


Q ss_pred             HHhCCHHHHHHHHhcCCCCcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcc
Q psy14874        446 ARYGHVGIINTLLQKGEKVDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINA  525 (1015)
Q Consensus       446 ~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~  525 (1015)
                      ...++.++++.+..........                      .+.......++|+.+.........+.|.....+.. 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-  137 (228)
T d1k1aa_          81 CEHRSPTCLRALLDSAAPGTLD----------------------LEARNYDGLTALHVAVNTECQETVQLLLERGADID-  137 (228)
T ss_dssp             HHTTCHHHHHHHHHHSCTTSCC----------------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-
T ss_pred             cccccccchhhhhhcccccccc----------------------ccccccccccccccccccccchhhhhhhccccccc-
Confidence            9999999999888765443322                      12335667899999999999999999998877653 


Q ss_pred             hhhHHHhhhhccccccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCC
Q psy14874        526 TDKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA  605 (1015)
Q Consensus       526 ~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga  605 (1015)
                                     ......+.++|+.|+..+..++++.+++.+. ..+..|..|.||||+|+..|+.+++++|+++|+
T Consensus       138 ---------------~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Ga  201 (228)
T d1k1aa_         138 ---------------AVDIKSGRSPLIHAVENNSLSMVQLLLQHGA-NVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA  201 (228)
T ss_dssp             ---------------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             ---------------cccccchhhHHHHHHHhhhhhhhhhhhhhcc-ccccccccCcchHHHHHHcCCHHHHHHHHHCCC
Confidence                           3345678999999999999999999997654 457788899999999999999999999999999


Q ss_pred             CCCCCCCCCCCHHHHHHhcCChHHHH
Q psy14874        606 SIDATDDQGQKPIHVAAQNNFPEVAQ  631 (1015)
Q Consensus       606 ~~~~~d~~g~t~l~~A~~~~~~~~~~  631 (1015)
                      |++.+|..|+||||+|+++++.|+++
T Consensus       202 d~n~~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         202 DSSLKNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             CTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             CCCCCCCCCCCHHHHHHhCCCccccC
Confidence            99999999999999999999998875

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.3e-26  Score=234.67  Aligned_cols=219  Identities=27%  Similarity=0.330  Sum_probs=166.0

Q ss_pred             CCCCcHHHHHHhcCCHHHHHHHHh----CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy14874         19 SIGWTPLLIACNRGHMELVNTMLN----NHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLA   94 (1015)
Q Consensus        19 ~~g~t~L~~A~~~g~~~iv~~Ll~----~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A   94 (1015)
                      .+|+||||+||+.|+.++|+.|++    +|+++|..|.+|+||||+|+..|+.+++++|+++|++.+..+..|.++++.|
T Consensus         1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a   80 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA   80 (228)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhcccccccccccccccccccccccccccccccc
Confidence            369999999999999999988875    8899999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHhccCc---cccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHcCChHHH
Q psy14874         95 AMNGYADLCRFLVHDHAA---VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASID-ATDDQGQKPIHVAAQNNFPEVA  170 (1015)
Q Consensus        95 ~~~g~~eiv~~Ll~~~~~---~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n-~~d~~~~t~L~~A~~~g~~~iv  170 (1015)
                      ...++.++++........   ..+.......++|+.+.........+.|.....+.. ..+..+.++++.|+..+..+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~  160 (228)
T d1k1aa_          81 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV  160 (228)
T ss_dssp             HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred             cccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhh
Confidence            999999988877653221   223344455666666666666666666666554432 2233445555555555555555


Q ss_pred             HHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy14874        171 QIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASC  250 (1015)
Q Consensus       171 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~  250 (1015)
                      +.+++.+..                                  .   ...+..|.||||+|+..|+.+++++|+++|+++
T Consensus       161 ~~~~~~~~~----------------------------------~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~  203 (228)
T d1k1aa_         161 QLLLQHGAN----------------------------------V---NAQMYSGSSALHSASGRGLLPLVRTLVRSGADS  203 (228)
T ss_dssp             HHHHHTTCC----------------------------------T---TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred             hhhhhhccc----------------------------------c---ccccccCcchHHHHHHcCCHHHHHHHHHCCCCC
Confidence            555544332                                  1   122335678888888888999999999999999


Q ss_pred             CCCCCCCCCHHHHHHHcCCHHHHH
Q psy14874        251 TDENKTGFTAVHLAAQNGHNQVLE  274 (1015)
Q Consensus       251 ~~~~~~~~t~L~~A~~~~~~~iv~  274 (1015)
                      +.+|.+|.||||+|+++|+.++|+
T Consensus       204 n~~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         204 SLKNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             TCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             CCCCCCCCCHHHHHHhCCCccccC
Confidence            999999999999999998888874

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.94  E-value=1e-25  Score=229.28  Aligned_cols=207  Identities=31%  Similarity=0.416  Sum_probs=184.6

Q ss_pred             HHHHHHHHHhcchhhcccCCCCCcHHHHHHHcCCHHHHHHHhhCCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHhcCCC
Q psy14874        384 VTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKGGARSIHTAARYGHVGIINTLLQKGEK  463 (1015)
Q Consensus       384 ~~iv~~Ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~i~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~  463 (1015)
                      .++|++|+++|+++....|.+|.||||+||..|+.+++++|+++|++++.++..+.++++.++..++.............
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRAT   81 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTC
T ss_pred             HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccccccccccccccccccc
Confidence            48999999999995444689999999999999999999999999999999999999999999999998887777665443


Q ss_pred             CcccccccccCchHHHHHHHHhhhhhhhhcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcchhhHHHhhhhcccccccc
Q psy14874        464 VDVTTNNLACGHVTVVGLLLSRAADLLQSADKNGKTCLHIAATHGHLQMVEVLLGQGAEINATDKVCDALLTHKAFINSK  543 (1015)
Q Consensus       464 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~ll~~~~~~~~~  543 (1015)
                      ...                         .....|.++.+.+.........+.|.++|+++                 +.+
T Consensus        82 ~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~-----------------~~~  119 (209)
T d1ot8a_          82 NLN-------------------------ARMHDGTTPLILAARLAIEGMVEDLITADADI-----------------NAA  119 (209)
T ss_dssp             CTT-------------------------CCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCT-----------------TCB
T ss_pred             ccc-------------------------cccccccccccccccccchhhhhhhhhhcccc-----------------ccc
Confidence            321                         22467889999999999999999999999888                 446


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy14874        544 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQ  623 (1015)
Q Consensus       544 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~T~L~~A~~~~~~~iv~~Ll~~ga~~~~~d~~g~t~l~~A~~  623 (1015)
                      +..|.|||+.|+..+..++++.+++... +++..|..|.||||+|+..|+.+++++|+++|+|++.+|..|+||||+|++
T Consensus       120 ~~~~~t~l~~~~~~~~~~~~~~l~~~~~-~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~  198 (209)
T d1ot8a_         120 DNSGKTALHWAAAVNNTEAVNILLMHHA-NRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASE  198 (209)
T ss_dssp             CTTSCBHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCCCCcchhhcccCcceeeeeeccccc-cccccccccccccchhccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            6789999999999999999999997754 458889999999999999999999999999999999999999999999999


Q ss_pred             cCChHHHHHH
Q psy14874        624 NNFPEVAQIF  633 (1015)
Q Consensus       624 ~~~~~~~~~l  633 (1015)
                      +|+.++|++|
T Consensus       199 ~~~~~iv~lL  208 (209)
T d1ot8a_         199 RLHHDIVRLL  208 (209)
T ss_dssp             TTCHHHHHHH
T ss_pred             cCCHHHHhhc
Confidence            9999999975

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.93  E-value=1.6e-25  Score=227.86  Aligned_cols=206  Identities=26%  Similarity=0.351  Sum_probs=176.4

Q ss_pred             HHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCc
Q psy14874         34 MELVNTMLNNHARVDV-FDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAA  112 (1015)
Q Consensus        34 ~~iv~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~  112 (1015)
                      .++|++|+++|+++|. .|.+|.||||+||+.|+.+++++|++.|++++.++..+.++++.++..++.+...........
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRAT   81 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTC
T ss_pred             HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccccccccccccccccccc
Confidence            4899999999999987 489999999999999999999999999999999999999999999999999988887766666


Q ss_pred             cccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHH
Q psy14874        113 VIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCA  192 (1015)
Q Consensus       113 ~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L  192 (1015)
                      ........|.++.+.+.........+.|.+.|++++..+..|.|||+.++..+..++++.+++.+.+ ++..+.      
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~-~~~~d~------  154 (209)
T d1ot8a_          82 NLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHAN-RDAQDD------  154 (209)
T ss_dssp             CTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCT------
T ss_pred             ccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeecccccc-cccccc------
Confidence            6666777889999999999999999999999999999999999999999999999999999887665 333333      


Q ss_pred             HHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Q psy14874        193 HIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAAQNGHNQV  272 (1015)
Q Consensus       193 ~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~~~~~~~i  272 (1015)
                                                    .|.||||.|+..|+.+++++|+++|++++.+|..|.|||++|+++|+.++
T Consensus       155 ------------------------------~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~i  204 (209)
T d1ot8a_         155 ------------------------------KDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDI  204 (209)
T ss_dssp             ------------------------------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             ------------------------------ccccccchhccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence                                          34566666777777777777888888888888888888888888888888


Q ss_pred             HHHH
Q psy14874        273 LEEM  276 (1015)
Q Consensus       273 v~~L  276 (1015)
                      |++|
T Consensus       205 v~lL  208 (209)
T d1ot8a_         205 VRLL  208 (209)
T ss_dssp             HHHH
T ss_pred             Hhhc
Confidence            8765

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.1e-25  Score=215.22  Aligned_cols=153  Identities=27%  Similarity=0.389  Sum_probs=139.1

Q ss_pred             cHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy14874         23 TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADL  102 (1015)
Q Consensus        23 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~ei  102 (1015)
                      +|||.||..|+.++|++|+++|+++|.+|.+|.||||+|+ .|+.+++++|+++|++++..+..|.++++.++..++.+.
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~   81 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT   81 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccccccccccccccCccccccccccccccc
Confidence            7999999999999999999999999999999999999886 789999999999999999999999999999999999999


Q ss_pred             HHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHHcCChHHHHHHhhcC
Q psy14874        103 CRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGA-SIDATDDQGQKPIHVAAQNNFPEVAQIFLRAH  177 (1015)
Q Consensus       103 v~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~ga-d~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~  177 (1015)
                      ++.|+. .+..++..+..|.+|+++|+..|+.+++++|+++|+ +++.+|..|.||||+|+..|+.+++++|+++|
T Consensus        82 ~~~l~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_          82 LQTLLE-FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             cccccc-ccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            999984 566788888999999999999999999999998886 78888999999999999999999999998865

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.92  E-value=6.2e-28  Score=265.02  Aligned_cols=244  Identities=17%  Similarity=0.085  Sum_probs=169.0

Q ss_pred             HhhHhhccCCCCCCcHHHHHHhcCCHHHHHH---HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-
Q psy14874          9 EISKALNKQTSIGWTPLLIACNRGHMELVNT---MLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKS-   84 (1015)
Q Consensus         9 ~~~~~~n~~~~~g~t~L~~A~~~g~~~iv~~---Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~-   84 (1015)
                      +....++.++..|.||||+||++||.+++++   |++.|+++|..|.+|.||||+||+.|+.++|++|+++|++++..+ 
T Consensus        78 ~~~~~~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~  157 (346)
T d2ajaa1          78 QLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI  157 (346)
T ss_dssp             THHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHH
T ss_pred             hhhhHHHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccc
Confidence            4455678889999999999999999887776   789999999999999999999999999999999999999988765 


Q ss_pred             -CCCCcHHHHHHHcCCHHHHHHHHhccCcc--ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy14874         85 -RVGRTALHLAAMNGYADLCRFLVHDHAAV--IDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVA  161 (1015)
Q Consensus        85 -~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~--i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A  161 (1015)
                       ..|.||||+||.+||.++|++|++.+...  .+..+..+.||++.|+.+|+.+++++|++.|++++.       +.+.+
T Consensus       158 ~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~-------~~~~~  230 (346)
T d2ajaa1         158 QAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAY-------AEIHE  230 (346)
T ss_dssp             SHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHH-------HHHCT
T ss_pred             ccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcch-------HHHHH
Confidence             45899999999999999999999754322  344455677888899999999999999999987642       34444


Q ss_pred             HHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccc------ccCCCCCCcHHHHHHHcC
Q psy14874        162 AQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVIS------ARNRVTEATPLQLAAEGG  235 (1015)
Q Consensus       162 ~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~------~~~~~~~~t~L~~A~~~g  235 (1015)
                      ...++.++..++...                    ..+..+....+......+...      ........++++.|+..|
T Consensus       231 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~  290 (346)
T d2ajaa1         231 FEYGEKYVNPFIARH--------------------VNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEV  290 (346)
T ss_dssp             TTTTTTTHHHHHHHH--------------------HHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGG
T ss_pred             HHcCcHhhhHHHHHh--------------------hccchHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCC
Confidence            444444444433321                    111111111111100000000      000001236777777777


Q ss_pred             CHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy14874        236 HANVVRVLVKAGAS-----CTDENKTGFTAVHLAAQNGHNQVLEEMRSS  279 (1015)
Q Consensus       236 ~~~iv~~Ll~~ga~-----~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~  279 (1015)
                      +.+++++|++.+..     .+..+.+|.||||+|++.|+.+++++|++.
T Consensus       291 ~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~  339 (346)
T d2ajaa1         291 LLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI  339 (346)
T ss_dssp             GHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred             hHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCC
Confidence            88888888876643     333445677888888888888888888764

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.4e-24  Score=205.53  Aligned_cols=151  Identities=25%  Similarity=0.380  Sum_probs=140.4

Q ss_pred             cHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy14874         23 TPLLIACNRGHMELVNTMLNN-HARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD  101 (1015)
Q Consensus        23 t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~e  101 (1015)
                      .+|+.||..|+.++|++|+++ ++++|..|..|+||||+|+. |+.+++++|++++++++..+..|.+|++.++..++.+
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~   82 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD   82 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCT-TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCcccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            469999999999999999986 78999999999999999874 8899999999999999999999999999999999999


Q ss_pred             HHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhc
Q psy14874        102 LCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRA  176 (1015)
Q Consensus       102 iv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~  176 (1015)
                      +++++++ .+.+++..+..|.||||+|+..|+.+++++|+ .|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus        83 ~~~~~l~-~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          83 TLKVLVE-HGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccc-cccccccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            9999995 56788999999999999999999999999887 6899999999999999999999999999999875

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=7.3e-24  Score=203.49  Aligned_cols=150  Identities=29%  Similarity=0.425  Sum_probs=141.9

Q ss_pred             CcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy14874         22 WTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYAD  101 (1015)
Q Consensus        22 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~e  101 (1015)
                      .||||.||+.|+.++|++|+++|++++ .|..|+||||+|+..++.++++.++......+..+..+.++++.++...+.+
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCccccccccccccccccccccccccccccccccccccccccccccce
Confidence            399999999999999999999999987 7999999999999999999999999999888888888999999999999999


Q ss_pred             HHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHH
Q psy14874        102 LCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIF  173 (1015)
Q Consensus       102 iv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~L  173 (1015)
                      .+++++ ..+.+.+.++..|.||||+|+..|+.+++++|++.|++++.+|.+|.||||+|+.+|+.+++++|
T Consensus        82 ~~~~l~-~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          82 IVEVLL-KHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHH-TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             eeeccc-ccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            999998 56778889999999999999999999999999999999999999999999999999999999976

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.9e-24  Score=203.63  Aligned_cols=154  Identities=27%  Similarity=0.388  Sum_probs=144.6

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHH
Q psy14874         56 SALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQ  135 (1015)
Q Consensus        56 t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~  135 (1015)
                      +|||+||..|+.++|++|+++|+++|.+|..|.||||+|+ .|+.+++++|++ .+++++..+..|.++++.++..++.+
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~-~~a~~~~~~~~~~~~l~~~~~~~~~~   80 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLL-RGANPDLKDRTGFAVIHDAARAGFLD   80 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccc-cccccccccccCcccccccccccccc
Confidence            7999999999999999999999999999999999999886 799999999995 57889999999999999999999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcC
Q psy14874        136 VCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFD  211 (1015)
Q Consensus       136 ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~  211 (1015)
                      .++.|++.+.+++..|..|.+|+|+|+..++.+++++|+++++.....++.+|.||||+|++.|+.+++++|+++|
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_          81 TLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999998778888999999999999999999988888753

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.91  E-value=4.7e-27  Score=257.93  Aligned_cols=264  Identities=15%  Similarity=0.048  Sum_probs=175.7

Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCC-----------CCCCCCCcHHHHHHHcCCHHHHHH---HHhCCCCCCCC
Q psy14874         18 TSIGWTPLLIACNRGHMELVNTMLNNHARVD-----------VFDQEGRSALHLAAEHGYLKVCDA---LLTHKAFINSK   83 (1015)
Q Consensus        18 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~-----------~~d~~g~t~L~~A~~~g~~~iv~~---Ll~~ga~in~~   83 (1015)
                      +..+.++++.+...+..++.+.+...+++++           .++..|.|||++|+++|+.+++++   |++.|+++|.+
T Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~  122 (346)
T d2ajaa1          43 SYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVI  122 (346)
T ss_dssp             CHHHHHHHCCCCSSHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--
T ss_pred             ccchHHHHHHHhhccHHHHHHHHHHcchhhccchhhhhhHHHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCccccc
Confidence            3334444555555556677777766554333           345577888888888888776665   67888888888


Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHhccCccccccc--cCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCCcHH
Q psy14874         84 SRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILT--LRKQTPLHLAAEAGQLQVCKLLLDLGASID---ATDDQGQKPI  158 (1015)
Q Consensus        84 ~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~--~~g~t~L~~Aa~~g~~~ivk~Ll~~gad~n---~~d~~~~t~L  158 (1015)
                      +..|.||||+||++||.++|++|++ .+++++..+  .+|+||||+|+.+|+.++|++|++.|++..   ..+.++.||+
T Consensus       123 ~~~g~taL~~Aa~~G~~~~v~~Ll~-~g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l  201 (346)
T d2ajaa1         123 QAENYQAFRLAAENGHLHVLNRLCE-LAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFR  201 (346)
T ss_dssp             CHHHHHHHHHHHHTTCHHHHHHHHH-SCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHH-cCCCccccccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchh
Confidence            8888888888888888888888885 456666654  357888888888888888888888887642   2334556777


Q ss_pred             HHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHH
Q psy14874        159 HVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHAN  238 (1015)
Q Consensus       159 ~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~  238 (1015)
                      +.|+.+|+.+++++|++.+++.        .++.+.++..++.++.+.+                      .+...+..+
T Consensus       202 ~~A~~~g~~~iv~~Ll~~ga~~--------~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~  251 (346)
T d2ajaa1         202 WAAVGRGHHNVINFLLDCPVML--------AYAEIHEFEYGEKYVNPFI----------------------ARHVNRLKE  251 (346)
T ss_dssp             HHHSTTCCHHHHHHHTTSHHHH--------HHHHHCTTTTTTTTHHHHH----------------------HHHHHHHHH
T ss_pred             hHHhhcCHHHHHHHHHhCCCCc--------chHHHHHHHcCcHhhhHHH----------------------HHhhccchH
Confidence            7788888888888888765431        2344444444444444443                      333333333


Q ss_pred             HHHHHHHcCCC--CCCCCC-------CCCCHHHHHHHcCCHHHHHHHHhCCCccc-----cccccCCCHHHHHHHcCCHH
Q psy14874        239 VVRVLVKAGAS--CTDENK-------TGFTAVHLAAQNGHNQVLEEMRSSKALNV-----YSKKLGVTALHVAAYFGQAD  304 (1015)
Q Consensus       239 iv~~Ll~~ga~--~~~~~~-------~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~-----~~~~~~~t~l~~A~~~~~~~  304 (1015)
                      ....+.....+  .+..+.       .+.++++.|+..+..+++++|++.+....     .....|.||||.|++.|+.+
T Consensus       252 ~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e  331 (346)
T d2ajaa1         252 MHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQG  331 (346)
T ss_dssp             HHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTT
T ss_pred             HHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHH
Confidence            33333322222  111111       13467888999999999999998776433     22346889999999999999


Q ss_pred             HHHHHHhc
Q psy14874        305 TVRELLSH  312 (1015)
Q Consensus       305 ~v~~Ll~~  312 (1015)
                      ++++|++.
T Consensus       332 ~v~lLL~~  339 (346)
T d2ajaa1         332 ACALLLSI  339 (346)
T ss_dssp             HHHHHTTS
T ss_pred             HHHHHhCC
Confidence            99999975

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=2.7e-22  Score=192.40  Aligned_cols=150  Identities=27%  Similarity=0.341  Sum_probs=139.5

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCH
Q psy14874         55 RSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL  134 (1015)
Q Consensus        55 ~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~  134 (1015)
                      .|||+.|++.|+.++|++|+++|++++ .+..|.||||+|+..++.++++.++. ........+..+.++++.++...+.
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLR-AGVSRDARTKVDRTPLHMAASEGHA   80 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCcccccccccccccccccccc-ccccccccccccccccccccccccc
Confidence            599999999999999999999999987 68899999999999999999999985 4555567777889999999999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHH
Q psy14874        135 QVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEEL  207 (1015)
Q Consensus       135 ~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~L  207 (1015)
                      +++++++++|++++.+|..|.||||+|+..|+.+++++|++.+.+ ++..+.+|.||||+|+.+|+.+++++|
T Consensus        81 ~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad-~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             eeeecccccCCccccccccCchHHHhhhhcchhheeeeccccccC-CcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            999999999999999999999999999999999999999999887 678899999999999999999999866

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.7e-22  Score=192.86  Aligned_cols=152  Identities=24%  Similarity=0.350  Sum_probs=138.0

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCC
Q psy14874         55 RSALHLAAEHGYLKVCDALLTH-KAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQ  133 (1015)
Q Consensus        55 ~t~L~~A~~~g~~~iv~~Ll~~-ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~  133 (1015)
                      ..+|+.|+..|+.++|++|++. ++++|.+|..|.||||+|+ .|+.+++++|++ .+.+++..+..|.+|++.|+..++
T Consensus         3 g~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~-~~~~~~~~~~~~~~~l~~~~~~~~   80 (156)
T d1bd8a_           3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLK-QGASPNVQDTSGTSPVHDAARTGF   80 (156)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             cHHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-cccccccccccc-cccccccccccccccccccccccc
Confidence            3569999999999999999975 7899999999999999987 588999999995 577889999999999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHHHcCCHHHHHHHHhc
Q psy14874        134 LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAAMQGSVGVIEELMKF  210 (1015)
Q Consensus       134 ~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  210 (1015)
                      .++++.+++.|+++|.+|..|.||||+|+..|+.+++++|++ +.+ ++.++.+|.||||+|+..|+.+++++|+++
T Consensus        81 ~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~~-~~~-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESD-LHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT-TSC-TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccccccccccccCCCCeeeccccccccccccccccc-ccc-ccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            999999999999999999999999999999999999998874 454 677899999999999999999999999874

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2e-22  Score=184.92  Aligned_cols=120  Identities=27%  Similarity=0.315  Sum_probs=86.5

Q ss_pred             CCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHcCC
Q psy14874         21 GWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGR-TALHLAAMNGY   99 (1015)
Q Consensus        21 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~-t~L~~A~~~g~   99 (1015)
                      +.++||.|++.|++++|++|+++|+++|.+|..|.||||.|+ .|+.+++++|+++|++++.++..|. ||||+|++.|+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~   81 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF   81 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            457788888888888888888888888877888888887664 5788888888888887777766654 46777777777


Q ss_pred             HHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHH
Q psy14874        100 ADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLD  142 (1015)
Q Consensus       100 ~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~  142 (1015)
                      .+++++|++ .+.+++..|..|+||||+|+.+|+.+++++|++
T Consensus        82 ~~~v~~Ll~-~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          82 LDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccc-cccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            666666664 356666666666666666666666666666653

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8.4e-22  Score=180.71  Aligned_cols=120  Identities=27%  Similarity=0.323  Sum_probs=111.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCC-CHHHHHHHcC
Q psy14874         54 GRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQ-TPLHLAAEAG  132 (1015)
Q Consensus        54 g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~-t~L~~Aa~~g  132 (1015)
                      +.++||.|+..|+.++|++|+++|+++|.++..|.||||.|+ .|+.+++++|+ +.+.+++..+..+. ||||+|+..|
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll-~~ga~~~~~~~~~~~~~L~~A~~~g   80 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLL-LHGAEPNCADPATLTRPVHDAAREG   80 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHH-TTTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccccc-ccccccccccccccccccccccccc
Confidence            468999999999999999999999999999999999999775 79999999999 46788898888776 6999999999


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhh
Q psy14874        133 QLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLR  175 (1015)
Q Consensus       133 ~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~  175 (1015)
                      +.+++++|+++|++++.+|..|.||||+|+++|+.+++++|+.
T Consensus        81 ~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          81 FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             CHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             cccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            9999999999999999999999999999999999999999975

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=1.4e-21  Score=210.10  Aligned_cols=177  Identities=19%  Similarity=0.183  Sum_probs=121.8

Q ss_pred             hccC-CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-------HHHHHHHHhCCCCCCCCCC
Q psy14874         14 LNKQ-TSIGWTPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGY-------LKVCDALLTHKAFINSKSR   85 (1015)
Q Consensus        14 ~n~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~-------~~iv~~Ll~~ga~in~~~~   85 (1015)
                      +|.. |.+|+||||+||+.|+.++|++|+++|++++.+|..|+||||.|+..|+       .++++++.+   .++..+.
T Consensus        99 vn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~---~~~~~d~  175 (301)
T d1sw6a_          99 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---CLILEDS  175 (301)
T ss_dssp             SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---GGGEECT
T ss_pred             cCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhh---hhhhccc
Confidence            4644 8999999999999999999999999999999999999999999998765       356666654   3455677


Q ss_pred             CCCcHHHHHHHcCC----HH--------HHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHH-----HHHHCCCCCC
Q psy14874         86 VGRTALHLAAMNGY----AD--------LCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCK-----LLLDLGASID  148 (1015)
Q Consensus        86 ~g~t~L~~A~~~g~----~e--------iv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk-----~Ll~~gad~n  148 (1015)
                      .|+||||.++..+.    .+        ++.+++.............+.++++.+........++     .+++.  .+|
T Consensus       176 ~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~in  253 (301)
T d1sw6a_         176 MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN--MLN  253 (301)
T ss_dssp             TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHH--TTT
T ss_pred             ccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhc--Ccc
Confidence            89999998886544    22        3344554444444444555566666655544433332     22332  367


Q ss_pred             CCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCchHHHHHH
Q psy14874        149 ATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGNTCAHIAA  196 (1015)
Q Consensus       149 ~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t~L~~A~  196 (1015)
                      .+|..|+||||+|++.|+.+++++|++++++ ++..+..|.|||++|+
T Consensus       254 ~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd-~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         254 AQDSNGDTCLNIAARLGNISIVDALLDYGAD-PFIANKSGLRPVDFGA  300 (301)
T ss_dssp             CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC-TTCCCTTSCCGGGGTC
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHcC
Confidence            7888888999999999999999999888877 6778888899988875

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=1.7e-22  Score=183.22  Aligned_cols=105  Identities=24%  Similarity=0.278  Sum_probs=63.2

Q ss_pred             cHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy14874         23 TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADL  102 (1015)
Q Consensus        23 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~ei  102 (1015)
                      |||++||+.|+.++|++|+++|+++|..|.+|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+.+|+.++
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~~   83 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSC   83 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCHH
T ss_pred             hHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchhh
Confidence            56666666666666666666666666666666666666666666666666666666666555555555555555555555


Q ss_pred             HHHHHhccCccccccccCCCCHHHHH
Q psy14874        103 CRFLVHDHAAVIDILTLRKQTPLHLA  128 (1015)
Q Consensus       103 v~~Ll~~~~~~i~~~~~~g~t~L~~A  128 (1015)
                      +++|+ +.+++++..|..|.||||+|
T Consensus        84 v~~Ll-~~Gad~~~~d~~G~t~l~~a  108 (118)
T d1myoa_          84 VKLLL-SKGADKTVKGPDGLTALEAT  108 (118)
T ss_dssp             HHHHH-TTCCCSSSSSSSTCCCCCTC
T ss_pred             hhhhh-cccccceeeCCCCCCHHHHH
Confidence            55555 23444444555555555444

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=1.3e-21  Score=210.36  Aligned_cols=195  Identities=18%  Similarity=0.189  Sum_probs=115.6

Q ss_pred             hCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH-------HHHHHHHhccCcc
Q psy14874         42 NNHARVDVF-DQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYA-------DLCRFLVHDHAAV  113 (1015)
Q Consensus        42 ~~g~~~~~~-d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~-------eiv~~Ll~~~~~~  113 (1015)
                      ..++++|.. |.+|+||||+|+..|+.++|++|+++|++++.+|..|.||||.||..++.       ++++++.    ..
T Consensus        94 ~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~----~~  169 (301)
T d1sw6a_          94 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY----PC  169 (301)
T ss_dssp             TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG----GG
T ss_pred             ccCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHh----hh
Confidence            346677754 77788888888888888888888888888888888888888888776542       3344332    23


Q ss_pred             ccccccCCCCHHHHHHHcCC----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCcccCCCCCc
Q psy14874        114 IDILTLRKQTPLHLAAEAGQ----LQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTATTKDGN  189 (1015)
Q Consensus       114 i~~~~~~g~t~L~~Aa~~g~----~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~  189 (1015)
                      ++..+..|+||||.++..+.    ..++++.++                         .++.++.+.+..........+.
T Consensus       170 ~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~l~~~~~~~~~~~~~~~~  224 (301)
T d1sw6a_         170 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLD-------------------------ILMGWIVKKQNRPIQSGTNEKE  224 (301)
T ss_dssp             GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHH-------------------------HHHHHHHHGGGCCEEEC-----
T ss_pred             hhhcccccCCHHHHHHHHhCccccHHHHHHHHH-------------------------HHHHHHHhcCCcchhccccccc
Confidence            45566677777777665332    223332221                         2344555554444444444555


Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCcccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q psy14874        190 TCAHIAAMQGSVGVIEELMKFDRSGVISARNRVTEATPLQLAAEGGHANVVRVLVKAGASCTDENKTGFTAVHLAA  265 (1015)
Q Consensus       190 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~t~L~~A~  265 (1015)
                      ++++.+........++.+..........+..+..|.||||+|++.|+.++|++|+++|++++.+|..|.|||++|+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         225 SKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             -----------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             chhHHHHhcchHHHHHHHhhHHHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence            5555544443333332221100000112233567889999999999999999999999999999999999999885

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.1e-21  Score=178.15  Aligned_cols=119  Identities=27%  Similarity=0.351  Sum_probs=60.8

Q ss_pred             cHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy14874         23 TPLLIACNRGHMELVNTMLNNHARVDVFDQEGRSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADL  102 (1015)
Q Consensus        23 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~ei  102 (1015)
                      ++|+.||+.|+.++|++|+++|+++|.+|.+|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.++
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence            34555555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             HHHHHhccCcccccccc-CCCCHHHHH--HHcCCHHHHHHHHH
Q psy14874        103 CRFLVHDHAAVIDILTL-RKQTPLHLA--AEAGQLQVCKLLLD  142 (1015)
Q Consensus       103 v~~Ll~~~~~~i~~~~~-~g~t~L~~A--a~~g~~~ivk~Ll~  142 (1015)
                      +++|++ ++++++..+. .+.||++++  +.+|+.+++++|++
T Consensus        83 v~~Ll~-~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~  124 (130)
T d1ycsb1          83 CKFLVE-SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG  124 (130)
T ss_dssp             HHHHHH-TTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred             HHHHHH-cCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHh
Confidence            555542 2344443332 244443332  23344444444443

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=4.5e-22  Score=180.35  Aligned_cols=107  Identities=25%  Similarity=0.316  Sum_probs=102.4

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCH
Q psy14874         55 RSALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQL  134 (1015)
Q Consensus        55 ~t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~  134 (1015)
                      .|||++|++.|+.++|++|+++|++++.++..|.||||+|+..|+.+++++|++ .+.+++..+..|+||||+|+.+|+.
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~-~g~din~~d~~g~tpLh~A~~~~~~   81 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLL-KGADINAPDKHHITPLLSAVYEGHV   81 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHH-SSCTTTCCSSSCSCHHHHHHTTTCC
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhcccccccccccccccccccccccccccccc-ccceeeecccccccchhhhhhcCch
Confidence            489999999999999999999999999999999999999999999999999994 6889999999999999999999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy14874        135 QVCKLLLDLGASIDATDDQGQKPIHVAA  162 (1015)
Q Consensus       135 ~ivk~Ll~~gad~n~~d~~~~t~L~~A~  162 (1015)
                      +++++|+++|+|++.+|.+|.||||+|.
T Consensus        82 ~~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          82 SCVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             HHHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             hhhhhhhcccccceeeCCCCCCHHHHHh
Confidence            9999999999999999999999999883

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.1e-20  Score=174.29  Aligned_cols=120  Identities=23%  Similarity=0.328  Sum_probs=110.8

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHH
Q psy14874         56 SALHLAAEHGYLKVCDALLTHKAFINSKSRVGRTALHLAAMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQ  135 (1015)
Q Consensus        56 t~L~~A~~~g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~  135 (1015)
                      ++|+.|+..|+.++|++|+++|+++|.+|..|.||||+|+..|+.+++++|++ .+.+++..|.+|+||||+|+.+|+.+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~-~g~~~~~~d~~g~tpLh~A~~~g~~~   81 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQ-FGVNVNAADSDGWTPLHCAASCNNVQ   81 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccc-cccccccccccCcccccccchhhHHH
Confidence            68999999999999999999999999999999999999999999999999995 57889999999999999999999999


Q ss_pred             HHHHHHHCCCCCCCCCC-CCCcHHHHH--HHcCChHHHHHHhhc
Q psy14874        136 VCKLLLDLGASIDATDD-QGQKPIHVA--AQNNFPEVAQIFLRA  176 (1015)
Q Consensus       136 ivk~Ll~~gad~n~~d~-~~~t~L~~A--~~~g~~~iv~~Ll~~  176 (1015)
                      ++++|+++|++++..+. .+.||++++  ++.|+.+++++|++.
T Consensus        82 ~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          82 VCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             HHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             HHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence            99999999999997765 578887765  577899999999874

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1.9e-19  Score=170.32  Aligned_cols=122  Identities=21%  Similarity=0.261  Sum_probs=89.3

Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCCCCC------CCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy14874         24 PLLIACNRGHMELVNTMLNNHARVDVF------DQEGRSALHLAAEH---GYLKVCDALLTHKAFINSKSRVGRTALHLA   94 (1015)
Q Consensus        24 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~------d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~in~~~~~g~t~L~~A   94 (1015)
                      .|+.|++.+++..+..++..|++++..      +..|+||||+|++.   |+.++|++|+++|+++|.++..|.||||+|
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A   88 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC   88 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred             HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhccccccc
Confidence            456788888888888888888776644      56677888887764   567777777777777777777777777777


Q ss_pred             HHcCCHHHHHHHHhccCccccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q psy14874         95 AMNGYADLCRFLVHDHAAVIDILTLRKQTPLHLAAEAGQLQVCKLLLDLGAS  146 (1015)
Q Consensus        95 ~~~g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~Aa~~g~~~ivk~Ll~~gad  146 (1015)
                      |..|+.+++++|++ ++++++..|..|+||||+|+..|+.+++++|++.++.
T Consensus        89 ~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1          89 CLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             HHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             cccccccccccccc-cCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence            77777777777773 4666677777777777777777777777777766553

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=1.2e-18  Score=164.80  Aligned_cols=126  Identities=22%  Similarity=0.261  Sum_probs=112.3

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCC------CCCCCcHHHHHHHc---CCHHHHHHHHhccCccccccccCCCCHHHH
Q psy14874         57 ALHLAAEHGYLKVCDALLTHKAFINSK------SRVGRTALHLAAMN---GYADLCRFLVHDHAAVIDILTLRKQTPLHL  127 (1015)
Q Consensus        57 ~L~~A~~~g~~~iv~~Ll~~ga~in~~------~~~g~t~L~~A~~~---g~~eiv~~Ll~~~~~~i~~~~~~g~t~L~~  127 (1015)
                      .|..|++.++...+..++..|++++.+      +..|+||||+|+..   |+.++|++|++ ++++++.++..|+||||+
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~-~gadin~~d~~g~TpLh~   87 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ-NSGNLDKQTGKGSTALHY   87 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH-HCSCTTCCCTTCCCHHHH
T ss_pred             HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHH-cCCChhhhhhhhcccccc
Confidence            456788999999999999999887654      66799999999974   67899999995 578899999999999999


Q ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCChHHHHHHhhcCCCCccc
Q psy14874        128 AAEAGQLQVCKLLLDLGASIDATDDQGQKPIHVAAQNNFPEVAQIFLRAHPSLVTA  183 (1015)
Q Consensus       128 Aa~~g~~~ivk~Ll~~gad~n~~d~~~~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~  183 (1015)
                      |+..|+.+++++|+++|++++.+|..|.||||+|++.|+.+++++|++.+......
T Consensus        88 A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~~~~  143 (154)
T d1dcqa1          88 CCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNS  143 (154)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCCS
T ss_pred             ccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCc
Confidence            99999999999999999999999999999999999999999999999976654333